Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381400 | XP_013461811.1 | 94.879 | 371 | 19 | 0 | 1 | 371 | 1 | 371 | 0.0 | 656 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381400 | sp|Q9C652|RBP1_ARATH | 54.500 | 200 | 84 | 3 | 5 | 197 | 1 | 200 | 9.01e-66 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381400 | A0A072V2H9 | 94.879 | 371 | 19 | 0 | 1 | 371 | 1 | 371 | 0.0 | 656 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0381400 | 0.812459 | 4.194065e-51 | -8.615850e-47 |
| Msa0006070 | Msa0381400 | 0.810607 | 1.059881e-50 | -8.615850e-47 |
| Msa0006110 | Msa0381400 | 0.805934 | 1.050232e-49 | -8.615850e-47 |
| Msa0017510 | Msa0381400 | 0.825750 | 3.954491e-54 | -8.615850e-47 |
| Msa0025730 | Msa0381400 | 0.812655 | 3.801277e-51 | -8.615850e-47 |
| Msa0036140 | Msa0381400 | 0.800891 | 1.164891e-48 | -8.615850e-47 |
| Msa0037700 | Msa0381400 | 0.815868 | 7.416254e-52 | -8.615850e-47 |
| Msa0037880 | Msa0381400 | 0.803751 | 3.002556e-49 | -8.615850e-47 |
| Msa0043980 | Msa0381400 | 0.807240 | 5.567074e-50 | -8.615850e-47 |
| Msa0054480 | Msa0381400 | 0.823806 | 1.135981e-53 | -8.615850e-47 |
| Msa0061080 | Msa0381400 | 0.820337 | 7.233051e-53 | -8.615850e-47 |
| Msa0068680 | Msa0381400 | 0.814745 | 1.317267e-51 | -8.615850e-47 |
| Msa0086650 | Msa0381400 | 0.800414 | 1.457339e-48 | -8.615850e-47 |
| Msa0090360 | Msa0381400 | 0.841980 | 3.418704e-58 | -8.615850e-47 |
| Msa0105620 | Msa0381400 | 0.802836 | 4.644083e-49 | -8.615850e-47 |
| Msa0114060 | Msa0381400 | 0.822480 | 2.316559e-53 | -8.615850e-47 |
| Msa0133130 | Msa0381400 | 0.824457 | 7.988380e-54 | -8.615850e-47 |
| Msa0137840 | Msa0381400 | 0.827992 | 1.151261e-54 | -8.615850e-47 |
| Msa0145440 | Msa0381400 | 0.820093 | 8.230706e-53 | -8.615850e-47 |
| Msa0150820 | Msa0381400 | 0.816268 | 6.036631e-52 | -8.615850e-47 |
| Msa0157290 | Msa0381400 | 0.826363 | 2.826452e-54 | -8.615850e-47 |
| Msa0160550 | Msa0381400 | 0.813285 | 2.765073e-51 | -8.615850e-47 |
| Msa0168230 | Msa0381400 | 0.801164 | 1.024420e-48 | -8.615850e-47 |
| Msa0173990 | Msa0381400 | 0.802166 | 6.381661e-49 | -8.615850e-47 |
| Msa0178930 | Msa0381400 | 0.802939 | 4.421281e-49 | -8.615850e-47 |
| Msa0184040 | Msa0381400 | 0.836830 | 7.434826e-57 | -8.615850e-47 |
| Msa0187120 | Msa0381400 | 0.804360 | 2.242754e-49 | -8.615850e-47 |
| Msa0205510 | Msa0381400 | 0.826697 | 2.352809e-54 | -8.615850e-47 |
| Msa0212990 | Msa0381400 | 0.809823 | 1.563743e-50 | -8.615850e-47 |
| Msa0216240 | Msa0381400 | 0.808392 | 3.167146e-50 | -8.615850e-47 |
| Msa0217680 | Msa0381400 | 0.800960 | 1.127547e-48 | -8.615850e-47 |
| Msa0220580 | Msa0381400 | 0.802714 | 4.921847e-49 | -8.615850e-47 |
| Msa0228070 | Msa0381400 | 0.832747 | 7.924309e-56 | -8.615850e-47 |
| Msa0231980 | Msa0381400 | 0.814204 | 1.735611e-51 | -8.615850e-47 |
| Msa0376350 | Msa0381400 | 0.817582 | 3.060800e-52 | -8.615850e-47 |
| Msa0379640 | Msa0381400 | 0.839796 | 1.278756e-57 | -8.615850e-47 |
| Msa0381400 | Msa0388700 | 0.821122 | 4.775608e-53 | -8.615850e-47 |
| Msa0381400 | Msa0402790 | 0.821616 | 3.673430e-53 | -8.615850e-47 |
| Msa0381400 | Msa0407930 | 0.829047 | 6.406002e-55 | -8.615850e-47 |
| Msa0381400 | Msa0416300 | 0.805925 | 1.054659e-49 | -8.615850e-47 |
| Msa0381400 | Msa0422400 | 0.919528 | 4.023752e-87 | -8.615850e-47 |
| Msa0381400 | Msa0424790 | 0.806968 | 6.356503e-50 | -8.615850e-47 |
| Msa0381400 | Msa0433640 | 0.821715 | 3.483443e-53 | -8.615850e-47 |
| Msa0381400 | Msa0453200 | 0.802566 | 5.278696e-49 | -8.615850e-47 |
| Msa0381400 | Msa0453890 | 0.813924 | 2.000568e-51 | -8.615850e-47 |
| Msa0381400 | Msa0466390 | 0.814253 | 1.692832e-51 | -8.615850e-47 |
| Msa0381400 | Msa0477130 | -0.826054 | 3.348051e-54 | -8.615850e-47 |
| Msa0381400 | Msa0479660 | 0.825423 | 4.724747e-54 | -8.615850e-47 |
| Msa0381400 | Msa0481530 | 0.836316 | 1.004981e-56 | -8.615850e-47 |
| Msa0381400 | Msa0484780 | 0.816057 | 6.729002e-52 | -8.615850e-47 |
| Msa0381400 | Msa0502100 | 0.803524 | 3.346429e-49 | -8.615850e-47 |
| Msa0381400 | Msa0507440 | 0.825026 | 5.865218e-54 | -8.615850e-47 |
| Msa0381400 | Msa0512750 | 0.810470 | 1.134401e-50 | -8.615850e-47 |
| Msa0381400 | Msa0512900 | 0.806066 | 9.853847e-50 | -8.615850e-47 |
| Msa0381400 | Msa0516170 | 0.818321 | 2.083556e-52 | -8.615850e-47 |
| Msa0381400 | Msa0516440 | 0.803938 | 2.744823e-49 | -8.615850e-47 |
| Msa0381400 | Msa0519740 | 0.935908 | 4.037160e-97 | -8.615850e-47 |
| Msa0381400 | Msa0521540 | 0.817066 | 3.999382e-52 | -8.615850e-47 |
| Msa0381400 | Msa0529890 | 0.827074 | 1.912064e-54 | -8.615850e-47 |
| Msa0381400 | Msa0545070 | 0.805609 | 1.229152e-49 | -8.615850e-47 |
| Msa0381400 | Msa0557320 | 0.800546 | 1.369927e-48 | -8.615850e-47 |
| Msa0381400 | Msa0561230 | 0.802602 | 5.189464e-49 | -8.615850e-47 |
| Msa0381400 | Msa0563840 | 0.819542 | 1.099874e-52 | -8.615850e-47 |
| Msa0381400 | Msa0575470 | 0.800025 | 1.749140e-48 | -8.615850e-47 |
| Msa0381400 | Msa0577500 | 0.801342 | 9.420422e-49 | -8.615850e-47 |
| Msa0381400 | Msa0578860 | 0.827576 | 1.449779e-54 | -8.615850e-47 |
| Msa0381400 | Msa0585560 | 0.829562 | 4.803399e-55 | -8.615850e-47 |
| Msa0381400 | Msa0597330 | 0.808393 | 3.166979e-50 | -8.615850e-47 |
| Msa0381400 | Msa0607050 | 0.831175 | 1.937842e-55 | -8.615850e-47 |
| Msa0381400 | Msa0610430 | 0.859413 | 4.207970e-63 | -8.615850e-47 |
| Msa0381400 | Msa0615710 | 0.808245 | 3.404561e-50 | -8.615850e-47 |
| Msa0381400 | Msa0625720 | 0.824203 | 9.168310e-54 | -8.615850e-47 |
| Msa0381400 | Msa0631360 | 0.803872 | 2.833726e-49 | -8.615850e-47 |
| Msa0381400 | Msa0639310 | 0.805162 | 1.524932e-49 | -8.615850e-47 |
| Msa0381400 | Msa0649490 | 0.827654 | 1.388691e-54 | -8.615850e-47 |
| Msa0381400 | Msa0657970 | 0.803619 | 3.197017e-49 | -8.615850e-47 |
| Msa0381400 | Msa0663390 | 0.840455 | 8.607844e-58 | -8.615850e-47 |
| Msa0381400 | Msa0673460 | 0.813806 | 2.124129e-51 | -8.615850e-47 |
| Msa0381400 | Msa0689260 | 0.818572 | 1.828076e-52 | -8.615850e-47 |
| Msa0381400 | Msa0690150 | 0.830105 | 3.541104e-55 | -8.615850e-47 |
| Msa0381400 | Msa0692830 | 0.815350 | 9.670252e-52 | -8.615850e-47 |
| Msa0381400 | Msa0692950 | 0.828216 | 1.017227e-54 | -8.615850e-47 |
| Msa0381400 | Msa0696640 | 0.802520 | 5.397090e-49 | -8.615850e-47 |
| Msa0381400 | Msa0698360 | 0.803390 | 3.567419e-49 | -8.615850e-47 |
| Msa0381400 | Msa0709400 | 0.805687 | 1.183452e-49 | -8.615850e-47 |
| Msa0381400 | Msa0711780 | 0.840336 | 9.243718e-58 | -8.615850e-47 |
| Msa0381400 | Msa0715700 | 0.822204 | 2.684518e-53 | -8.615850e-47 |
| Msa0381400 | Msa0740510 | 0.820988 | 5.127197e-53 | -8.615850e-47 |
| Msa0381400 | Msa0743720 | 0.830643 | 2.616285e-55 | -8.615850e-47 |
| Msa0381400 | Msa0745790 | 0.818874 | 1.561223e-52 | -8.615850e-47 |
| Msa0381400 | Msa0749290 | 0.811725 | 6.063780e-51 | -8.615850e-47 |
| Msa0381400 | Msa0771720 | 0.819407 | 1.180322e-52 | -8.615850e-47 |
| Msa0381400 | Msa0793800 | 0.825102 | 5.627751e-54 | -8.615850e-47 |
| Msa0381400 | Msa0794670 | 0.837185 | 6.034375e-57 | -8.615850e-47 |
| Msa0381400 | Msa0820770 | 0.816674 | 4.895610e-52 | -8.615850e-47 |
| Msa0381400 | Msa0824680 | 0.805214 | 1.487127e-49 | -8.615850e-47 |
| Msa0381400 | Msa0861090 | 0.815310 | 9.869644e-52 | -8.615850e-47 |
| Msa0381400 | Msa0867220 | 0.809109 | 2.225606e-50 | -8.615850e-47 |
| Msa0381400 | Msa0869120 | 0.827975 | 1.162127e-54 | -8.615850e-47 |
| Msa0381400 | Msa0877410 | 0.803347 | 3.641357e-49 | -8.615850e-47 |
| Msa0381400 | Msa0880020 | 0.801177 | 1.018231e-48 | -8.615850e-47 |
| Msa0381400 | Msa0880140 | 0.822208 | 2.678826e-53 | -8.615850e-47 |
| Msa0381400 | Msa0896750 | 0.820121 | 8.106775e-53 | -8.615850e-47 |
| Msa0381400 | Msa0902760 | 0.821203 | 4.575202e-53 | -8.615850e-47 |
| Msa0381400 | Msa0923330 | 0.800698 | 1.275840e-48 | -8.615850e-47 |
| Msa0381400 | Msa0933100 | 0.818939 | 1.508502e-52 | -8.615850e-47 |
| Msa0381400 | Msa0933230 | 0.825869 | 3.704883e-54 | -8.615850e-47 |
| Msa0381400 | Msa0933310 | 0.816972 | 4.197464e-52 | -8.615850e-47 |
| Msa0381400 | Msa0938220 | 0.816808 | 4.567857e-52 | -8.615850e-47 |
| Msa0381400 | Msa0963270 | 0.809573 | 1.770220e-50 | -8.615850e-47 |
| Msa0381400 | Msa0971090 | 0.816875 | 4.413260e-52 | -8.615850e-47 |
| Msa0381400 | Msa0975340 | 0.809046 | 2.296281e-50 | -8.615850e-47 |
| Msa0381400 | Msa0987370 | 0.800277 | 1.554514e-48 | -8.615850e-47 |
| Msa0381400 | Msa0993290 | 0.814402 | 1.569440e-51 | -8.615850e-47 |
| Msa0381400 | Msa0993600 | 0.811731 | 6.044740e-51 | -8.615850e-47 |
| Msa0381400 | Msa0999100 | 0.807410 | 5.123865e-50 | -8.615850e-47 |
| Msa0381400 | Msa1013400 | 0.825058 | 5.765397e-54 | -8.615850e-47 |
| Msa0381400 | Msa1014540 | 0.801183 | 1.015366e-48 | -8.615850e-47 |
| Msa0381400 | Msa1023920 | 0.843660 | 1.222196e-58 | -8.615850e-47 |
| Msa0381400 | Msa1030970 | 0.801311 | 9.561060e-49 | -8.615850e-47 |
| Msa0381400 | Msa1062920 | 0.804104 | 2.535238e-49 | -8.615850e-47 |
| Msa0381400 | Msa1063510 | 0.807340 | 5.303631e-50 | -8.615850e-47 |
| Msa0381400 | Msa1075540 | 0.807385 | 5.187060e-50 | -8.615850e-47 |
| Msa0381400 | Msa1079590 | 0.807473 | 4.968208e-50 | -8.615850e-47 |
| Msa0381400 | Msa1082500 | 0.830492 | 2.849440e-55 | -8.615850e-47 |
| Msa0381400 | Msa1093530 | 0.825325 | 4.985509e-54 | -8.615850e-47 |
| Msa0381400 | Msa1098420 | 0.800842 | 1.192091e-48 | -8.615850e-47 |
| Msa0381400 | Msa1100050 | 0.819681 | 1.022109e-52 | -8.615850e-47 |
| Msa0381400 | Msa1107900 | 0.843904 | 1.051324e-58 | -8.615850e-47 |
| Msa0381400 | Msa1109680 | 0.804964 | 1.677301e-49 | -8.615850e-47 |
| Msa0381400 | Msa1119480 | 0.814491 | 1.499418e-51 | -8.615850e-47 |
| Msa0381400 | Msa1123380 | 0.809591 | 1.754516e-50 | -8.615850e-47 |
| Msa0381400 | Msa1124960 | 0.810224 | 1.282058e-50 | -8.615850e-47 |
| Msa0381400 | Msa1131220 | 0.818759 | 1.657575e-52 | -8.615850e-47 |
| Msa0381400 | Msa1135470 | 0.805838 | 1.100031e-49 | -8.615850e-47 |
| Msa0381400 | Msa1137570 | 0.803503 | 3.379874e-49 | -8.615850e-47 |
| Msa0381400 | Msa1151720 | 0.804646 | 1.955129e-49 | -8.615850e-47 |
| Msa0381400 | Msa1154280 | 0.809106 | 2.229251e-50 | -8.615850e-47 |
| Msa0381400 | Msa1160590 | 0.832776 | 7.795134e-56 | -8.615850e-47 |
| Msa0381400 | Msa1162780 | 0.804578 | 2.020067e-49 | -8.615850e-47 |
| Msa0381400 | Msa1167340 | 0.804428 | 2.170789e-49 | -8.615850e-47 |
| Msa0381400 | Msa1168160 | 0.802638 | 5.102901e-49 | -8.615850e-47 |
| Msa0381400 | Msa1172670 | 0.806557 | 7.763802e-50 | -8.615850e-47 |
| Msa0381400 | Msa1174040 | 0.804617 | 1.982532e-49 | -8.615850e-47 |
| Msa0381400 | Msa1193290 | 0.817503 | 3.188503e-52 | -8.615850e-47 |
| Msa0381400 | Msa1201560 | 0.827144 | 1.839713e-54 | -8.615850e-47 |
| Msa0381400 | Msa1204530 | 0.815559 | 8.689043e-52 | -8.615850e-47 |
| Msa0381400 | Msa1208880 | 0.800887 | 1.167307e-48 | -8.615850e-47 |
| Msa0381400 | Msa1212940 | 0.803109 | 4.077730e-49 | -8.615850e-47 |
| Msa0381400 | Msa1214890 | 0.806547 | 7.799939e-50 | -8.615850e-47 |
| Msa0381400 | Msa1224480 | 0.801003 | 1.105056e-48 | -8.615850e-47 |
| Msa0381400 | Msa1228590 | 0.805969 | 1.032874e-49 | -8.615850e-47 |
| Msa0381400 | Msa1235740 | 0.804134 | 2.498790e-49 | -8.615850e-47 |
| Msa0381400 | Msa1244250 | 0.803935 | 2.748932e-49 | -8.615850e-47 |
| Msa0381400 | Msa1245930 | 0.808444 | 3.087639e-50 | -8.615850e-47 |
| Msa0381400 | Msa1251730 | 0.821919 | 3.125019e-53 | -8.615850e-47 |
| Msa0381400 | Msa1253020 | 0.804037 | 2.617666e-49 | -8.615850e-47 |
| Msa0381400 | Msa1259060 | 0.800877 | 1.172505e-48 | -8.615850e-47 |
| Msa0381400 | Msa1267430 | 0.804569 | 2.028640e-49 | -8.615850e-47 |
| Msa0381400 | Msa1277660 | 0.801590 | 8.381519e-49 | -8.615850e-47 |
| Msa0381400 | Msa1294480 | 0.824683 | 7.068005e-54 | -8.615850e-47 |
| Msa0381400 | Msa1296760 | 0.807466 | 4.986908e-50 | -8.615850e-47 |
| Msa0381400 | Msa1305190 | 0.803732 | 3.029386e-49 | -8.615850e-47 |
| Msa0381400 | Msa1305340 | 0.816223 | 6.177137e-52 | -8.615850e-47 |
| Msa0381400 | Msa1306840 | 0.804086 | 2.557394e-49 | -8.615850e-47 |
| Msa0381400 | Msa1331000 | 0.808797 | 2.595993e-50 | -8.615850e-47 |
| Msa0381400 | Msa1331910 | 0.811253 | 7.679853e-51 | -8.615850e-47 |
| Msa0381400 | Msa1353470 | 0.800814 | 1.207814e-48 | -8.615850e-47 |
| Msa0381400 | Msa1358250 | 0.815370 | 9.571927e-52 | -8.615850e-47 |
| Msa0381400 | Msa1359040 | 0.831983 | 1.224890e-55 | -8.615850e-47 |
| Msa0381400 | Msa1370070 | -0.839496 | 1.530218e-57 | -8.615850e-47 |
| Msa0381400 | Msa1382560 | 0.802420 | 5.658368e-49 | -8.615850e-47 |
| Msa0381400 | Msa1385670 | 0.803084 | 4.126924e-49 | -8.615850e-47 |
| Msa0381400 | Msa1386780 | 0.806331 | 8.665089e-50 | -8.615850e-47 |
| Msa0381400 | Msa1390050 | 0.806388 | 8.426897e-50 | -8.615850e-47 |
| Msa0381400 | Msa1392780 | 0.818522 | 1.876171e-52 | -8.615850e-47 |
| Msa0381400 | Msa1419870 | 0.814915 | 1.207915e-51 | -8.615850e-47 |
| Msa0381400 | Msa1424450 | 0.806083 | 9.771922e-50 | -8.615850e-47 |
| Msa0381400 | Msa1424750 | 0.802132 | 6.486530e-49 | -8.615850e-47 |
| Msa0381400 | Msa1427230 | 0.812103 | 5.017337e-51 | -8.615850e-47 |
| Msa0381400 | Msa1432420 | 0.817839 | 2.677151e-52 | -8.615850e-47 |
| Msa0381400 | Msa1433390 | 0.834554 | 2.802450e-56 | -8.615850e-47 |
| Msa0381400 | Msa1439320 | 0.803180 | 3.942998e-49 | -8.615850e-47 |
| Msa0381400 | Msa1451550 | 0.809765 | 1.609356e-50 | -8.615850e-47 |
| Msa0381400 | Msa1454480 | 0.802822 | 4.674807e-49 | -8.615850e-47 |
| Msa0381400 | Msa1457920 | 0.806189 | 9.280922e-50 | -8.615850e-47 |
| Msa0381400 | Msa1460830 | 0.804725 | 1.882317e-49 | -8.615850e-47 |
| Msa0381400 | Msa1466540 | 0.816798 | 4.591368e-52 | -8.615850e-47 |
| Msa0243100 | Msa0381400 | 0.803878 | 2.825545e-49 | -8.615850e-47 |
| Msa0245940 | Msa0381400 | 0.801760 | 7.733131e-49 | -8.615850e-47 |
| Msa0253200 | Msa0381400 | 0.801919 | 7.174115e-49 | -8.615850e-47 |
| Msa0264150 | Msa0381400 | 0.840446 | 8.655821e-58 | -8.615850e-47 |
| Msa0271530 | Msa0381400 | 0.834554 | 2.803466e-56 | -8.615850e-47 |
| Msa0279220 | Msa0381400 | 0.810352 | 1.202770e-50 | -8.615850e-47 |
| Msa0287410 | Msa0381400 | 0.817870 | 2.634545e-52 | -8.615850e-47 |
| Msa0287650 | Msa0381400 | 0.801907 | 7.213046e-49 | -8.615850e-47 |
| Msa0292030 | Msa0381400 | 0.806388 | 8.429988e-50 | -8.615850e-47 |
| Msa0319170 | Msa0381400 | 0.813833 | 2.094968e-51 | -8.615850e-47 |
| Msa0330340 | Msa0381400 | 0.802505 | 5.435631e-49 | -8.615850e-47 |
| Msa0334360 | Msa0381400 | 0.808348 | 3.237347e-50 | -8.615850e-47 |
| Msa0339250 | Msa0381400 | 0.803874 | 2.830973e-49 | -8.615850e-47 |
| Msa0344980 | Msa0381400 | 0.816649 | 4.959657e-52 | -8.615850e-47 |
| Msa0347770 | Msa0381400 | 0.803096 | 4.103057e-49 | -8.615850e-47 |
| Msa0351810 | Msa0381400 | 0.806953 | 6.403381e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381400 | MtrunA17_Chr3g0135111 | 94.879 | 371 | 19 | 0 | 1 | 371 | 1 | 371 | 0.0 | 656 |
| Msa0381400 | MtrunA17_Chr1g0186351 | 54.359 | 195 | 86 | 2 | 5 | 198 | 1 | 193 | 1.55e-63 | 209 |
| Msa0381400 | MtrunA17_Chr3g0101061 | 52.764 | 199 | 84 | 3 | 1 | 196 | 28 | 219 | 2.78e-60 | 202 |
| Msa0381400 | MtrunA17_Chr2g0290191 | 52.381 | 189 | 85 | 2 | 8 | 196 | 2 | 185 | 3.69e-58 | 196 |
| Msa0381400 | MtrunA17_Chr5g0447761 | 51.042 | 192 | 87 | 2 | 5 | 196 | 1 | 185 | 4.56e-57 | 193 |
| Msa0381400 | MtrunA17_Chr6g0449481 | 41.053 | 190 | 92 | 3 | 11 | 199 | 46 | 216 | 1.07e-44 | 158 |
| Msa0381400 | MtrunA17_Chr3g0120721 | 35.294 | 187 | 101 | 3 | 11 | 196 | 19 | 186 | 3.85e-36 | 134 |
| Msa0381400 | MtrunA17_Chr5g0402191 | 31.633 | 196 | 114 | 2 | 8 | 203 | 2 | 177 | 1.37e-26 | 109 |
| Msa0381400 | MtrunA17_Chr5g0402191 | 31.308 | 214 | 112 | 3 | 11 | 194 | 93 | 301 | 3.03e-26 | 108 |
| Msa0381400 | MtrunA17_Chr8g0375101 | 31.925 | 213 | 113 | 6 | 11 | 194 | 93 | 302 | 3.60e-25 | 105 |
| Msa0381400 | MtrunA17_Chr8g0375101 | 31.156 | 199 | 117 | 2 | 8 | 206 | 2 | 180 | 3.75e-25 | 105 |
| Msa0381400 | MtrunA17_Chr4g0045921 | 28.090 | 267 | 145 | 8 | 6 | 263 | 72 | 300 | 2.11e-20 | 91.3 |
| Msa0381400 | MtrunA17_Chr8g0360551 | 24.468 | 188 | 127 | 2 | 6 | 193 | 69 | 241 | 8.57e-15 | 75.5 |
| Msa0381400 | MtrunA17_Chr7g0276531 | 43.750 | 80 | 44 | 1 | 6 | 84 | 14 | 93 | 1.52e-14 | 72.8 |
| Msa0381400 | MtrunA17_Chr4g0058151 | 30.198 | 202 | 113 | 6 | 2 | 195 | 114 | 295 | 3.38e-14 | 72.4 |
| Msa0381400 | MtrunA17_Chr4g0068631 | 30.000 | 180 | 95 | 6 | 10 | 184 | 88 | 241 | 3.61e-14 | 73.9 |
| Msa0381400 | MtrunA17_Chr7g0219021 | 46.914 | 81 | 41 | 1 | 10 | 88 | 40 | 120 | 5.67e-14 | 71.2 |
| Msa0381400 | MtrunA17_Chr4g0061451 | 44.304 | 79 | 42 | 1 | 11 | 87 | 43 | 121 | 1.05e-13 | 70.5 |
| Msa0381400 | MtrunA17_Chr7g0255011 | 23.936 | 188 | 139 | 2 | 6 | 193 | 123 | 306 | 1.14e-13 | 72.0 |
| Msa0381400 | MtrunA17_Chr3g0127751 | 43.750 | 80 | 44 | 1 | 6 | 84 | 22 | 101 | 1.69e-13 | 69.7 |
| Msa0381400 | MtrunA17_Chr3g0121631 | 36.047 | 86 | 55 | 0 | 112 | 197 | 31 | 116 | 2.18e-13 | 67.0 |
| Msa0381400 | MtrunA17_Chr3g0121631 | 38.636 | 88 | 53 | 1 | 1 | 87 | 27 | 114 | 6.35e-11 | 60.1 |
| Msa0381400 | MtrunA17_Chr1g0181111 | 30.769 | 195 | 129 | 3 | 7 | 195 | 81 | 275 | 3.66e-13 | 69.3 |
| Msa0381400 | MtrunA17_Chr3g0116631 | 27.551 | 196 | 125 | 5 | 8 | 198 | 107 | 290 | 4.66e-13 | 68.9 |
| Msa0381400 | MtrunA17_Chr3g0086861 | 45.570 | 79 | 41 | 1 | 11 | 87 | 45 | 123 | 5.41e-13 | 70.1 |
| Msa0381400 | MtrunA17_Chr1g0210241 | 43.038 | 79 | 43 | 1 | 11 | 87 | 8 | 86 | 7.30e-13 | 68.2 |
| Msa0381400 | MtrunA17_Chr1g0210241 | 35.556 | 90 | 49 | 2 | 118 | 202 | 8 | 93 | 9.00e-11 | 62.0 |
| Msa0381400 | MtrunA17_Chr1g0153181 | 26.236 | 263 | 159 | 12 | 12 | 262 | 213 | 452 | 7.99e-13 | 69.7 |
| Msa0381400 | MtrunA17_Chr3g0087481 | 26.344 | 186 | 122 | 5 | 11 | 192 | 61 | 235 | 1.45e-12 | 66.6 |
| Msa0381400 | MtrunA17_Chr7g0268551 | 23.664 | 262 | 159 | 7 | 6 | 266 | 12 | 233 | 1.53e-12 | 68.6 |
| Msa0381400 | MtrunA17_Chr4g0050781 | 35.632 | 87 | 55 | 1 | 118 | 203 | 8 | 94 | 1.60e-12 | 66.2 |
| Msa0381400 | MtrunA17_Chr3g0144311 | 36.250 | 80 | 50 | 1 | 6 | 84 | 25 | 104 | 9.14e-12 | 65.1 |
| Msa0381400 | MtrunA17_Chr1g0153871 | 26.816 | 179 | 113 | 5 | 12 | 187 | 192 | 355 | 1.05e-11 | 65.9 |
| Msa0381400 | MtrunA17_Chr4g0017401 | 37.333 | 75 | 47 | 0 | 118 | 192 | 17 | 91 | 2.10e-11 | 63.9 |
| Msa0381400 | MtrunA17_Chr3g0110211 | 26.667 | 240 | 146 | 7 | 10 | 245 | 25 | 238 | 2.24e-11 | 64.7 |
| Msa0381400 | MtrunA17_Chr3g0133651 | 27.374 | 179 | 112 | 5 | 12 | 187 | 189 | 352 | 2.29e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0381400 | AT1G58470.2 | 54.500 | 200 | 84 | 3 | 5 | 197 | 1 | 200 | 9.16e-67 | 215 |
| Msa0381400 | AT1G58470.1 | 54.500 | 200 | 84 | 3 | 5 | 197 | 1 | 200 | 9.16e-67 | 215 |
| Msa0381400 | AT4G14300.1 | 53.093 | 194 | 88 | 1 | 5 | 198 | 1 | 191 | 1.48e-64 | 211 |
| Msa0381400 | AT4G14300.2 | 53.093 | 194 | 88 | 1 | 5 | 198 | 1 | 191 | 1.48e-64 | 211 |
| Msa0381400 | AT4G26650.2 | 52.683 | 205 | 81 | 4 | 1 | 196 | 1 | 198 | 2.93e-60 | 201 |
| Msa0381400 | AT4G26650.1 | 53.299 | 197 | 78 | 3 | 7 | 196 | 12 | 201 | 6.51e-60 | 200 |
| Msa0381400 | AT5G55550.5 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 7.52e-60 | 200 |
| Msa0381400 | AT5G55550.4 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 7.52e-60 | 200 |
| Msa0381400 | AT5G55550.9 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 7.52e-60 | 200 |
| Msa0381400 | AT5G55550.7 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 7.52e-60 | 200 |
| Msa0381400 | AT5G55550.1 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 7.52e-60 | 200 |
| Msa0381400 | AT2G33410.1 | 48.969 | 194 | 96 | 2 | 5 | 198 | 1 | 191 | 8.82e-60 | 198 |
| Msa0381400 | AT5G55550.2 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 9.31e-60 | 200 |
| Msa0381400 | AT5G55550.3 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 9.31e-60 | 200 |
| Msa0381400 | AT5G55550.6 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 9.31e-60 | 200 |
| Msa0381400 | AT5G55550.11 | 48.291 | 234 | 106 | 5 | 5 | 229 | 1 | 228 | 9.31e-60 | 200 |
| Msa0381400 | AT3G07810.1 | 51.562 | 192 | 88 | 2 | 5 | 196 | 1 | 187 | 1.60e-59 | 200 |
| Msa0381400 | AT3G07810.2 | 51.562 | 192 | 88 | 2 | 5 | 196 | 1 | 187 | 1.62e-59 | 200 |
| Msa0381400 | AT5G47620.1 | 45.755 | 212 | 99 | 2 | 5 | 207 | 1 | 205 | 5.29e-53 | 181 |
| Msa0381400 | AT5G47620.2 | 45.755 | 212 | 99 | 2 | 5 | 207 | 1 | 205 | 5.29e-53 | 181 |
| Msa0381400 | AT5G47620.5 | 45.755 | 212 | 99 | 2 | 5 | 207 | 1 | 205 | 5.29e-53 | 181 |
| Msa0381400 | AT5G55550.8 | 39.024 | 287 | 101 | 6 | 5 | 229 | 1 | 275 | 2.99e-51 | 178 |
| Msa0381400 | AT5G55550.10 | 39.024 | 287 | 101 | 6 | 5 | 229 | 1 | 275 | 4.46e-51 | 178 |
| Msa0381400 | AT5G47620.4 | 41.453 | 234 | 99 | 3 | 5 | 207 | 1 | 227 | 6.15e-48 | 169 |
| Msa0381400 | AT5G40490.1 | 41.799 | 189 | 90 | 3 | 11 | 198 | 43 | 212 | 9.10e-42 | 151 |
| Msa0381400 | AT3G13224.2 | 37.766 | 188 | 99 | 2 | 10 | 196 | 19 | 189 | 2.79e-40 | 146 |
| Msa0381400 | AT3G13224.3 | 37.968 | 187 | 98 | 2 | 11 | 196 | 11 | 180 | 5.45e-40 | 145 |
| Msa0381400 | AT3G13224.3 | 44.048 | 84 | 46 | 1 | 112 | 195 | 5 | 87 | 4.01e-16 | 79.3 |
| Msa0381400 | AT1G17640.2 | 41.146 | 192 | 96 | 2 | 11 | 201 | 67 | 242 | 1.40e-39 | 144 |
| Msa0381400 | AT1G17640.1 | 41.146 | 192 | 96 | 2 | 11 | 201 | 67 | 242 | 1.40e-39 | 144 |
| Msa0381400 | AT1G17640.3 | 41.146 | 192 | 96 | 2 | 11 | 201 | 67 | 242 | 1.40e-39 | 144 |
| Msa0381400 | AT3G13224.1 | 39.394 | 165 | 83 | 2 | 11 | 175 | 20 | 167 | 2.96e-36 | 132 |
| Msa0381400 | AT3G13224.1 | 46.154 | 78 | 41 | 1 | 118 | 195 | 20 | 96 | 2.51e-15 | 75.1 |
| Msa0381400 | AT5G40490.2 | 40.936 | 171 | 81 | 3 | 29 | 198 | 44 | 195 | 2.64e-35 | 134 |
| Msa0381400 | AT5G40490.2 | 40.741 | 81 | 46 | 2 | 124 | 204 | 32 | 110 | 1.05e-11 | 66.2 |
| Msa0381400 | AT4G36960.1 | 36.702 | 188 | 99 | 2 | 11 | 198 | 4 | 171 | 1.76e-31 | 123 |
| Msa0381400 | AT4G36960.1 | 27.083 | 240 | 130 | 3 | 11 | 207 | 92 | 329 | 2.35e-19 | 89.0 |
| Msa0381400 | AT4G36960.2 | 36.702 | 188 | 99 | 2 | 11 | 198 | 4 | 171 | 1.76e-31 | 123 |
| Msa0381400 | AT4G36960.2 | 27.083 | 240 | 130 | 3 | 11 | 207 | 92 | 329 | 2.35e-19 | 89.0 |
| Msa0381400 | AT5G47620.3 | 43.919 | 148 | 67 | 2 | 69 | 207 | 5 | 145 | 5.07e-30 | 119 |
| Msa0381400 | AT5G47620.3 | 34.043 | 94 | 59 | 2 | 7 | 99 | 43 | 134 | 3.68e-12 | 67.4 |
| Msa0381400 | AT5G50250.1 | 29.843 | 191 | 116 | 4 | 8 | 195 | 111 | 286 | 5.80e-18 | 83.6 |
| Msa0381400 | AT3G15010.1 | 26.154 | 195 | 127 | 5 | 1 | 193 | 64 | 243 | 5.08e-17 | 82.4 |
| Msa0381400 | AT3G15010.2 | 26.154 | 195 | 127 | 5 | 1 | 193 | 64 | 243 | 5.08e-17 | 82.4 |
| Msa0381400 | AT4G24770.1 | 28.934 | 197 | 122 | 4 | 2 | 195 | 142 | 323 | 8.93e-17 | 80.9 |
| Msa0381400 | AT4G24770.2 | 28.934 | 197 | 122 | 4 | 2 | 195 | 142 | 323 | 8.93e-17 | 80.9 |
| Msa0381400 | AT3G52380.1 | 31.892 | 185 | 110 | 6 | 8 | 188 | 114 | 286 | 5.97e-14 | 72.4 |
| Msa0381400 | AT3G23830.2 | 45.679 | 81 | 42 | 1 | 10 | 88 | 35 | 115 | 1.16e-13 | 68.2 |
| Msa0381400 | AT3G23830.2 | 39.506 | 81 | 48 | 1 | 116 | 195 | 34 | 114 | 3.74e-12 | 63.5 |
| Msa0381400 | AT3G23830.1 | 45.679 | 81 | 42 | 1 | 10 | 88 | 35 | 115 | 1.16e-13 | 68.2 |
| Msa0381400 | AT3G23830.1 | 39.506 | 81 | 48 | 1 | 116 | 195 | 34 | 114 | 3.74e-12 | 63.5 |
| Msa0381400 | AT3G54770.3 | 41.250 | 80 | 46 | 1 | 6 | 84 | 13 | 92 | 2.56e-13 | 69.7 |
| Msa0381400 | AT3G56860.9 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.11 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.8 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.5 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.7 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.2 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.6 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.10 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.3 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.1 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G56860.4 | 24.500 | 200 | 125 | 4 | 11 | 197 | 141 | 327 | 3.00e-13 | 71.2 |
| Msa0381400 | AT3G54770.1 | 41.250 | 80 | 46 | 1 | 6 | 84 | 13 | 92 | 3.07e-13 | 69.7 |
| Msa0381400 | AT1G03457.2 | 27.513 | 189 | 122 | 5 | 6 | 194 | 8 | 181 | 4.36e-13 | 70.5 |
| Msa0381400 | AT1G76460.1 | 40.000 | 80 | 47 | 1 | 6 | 84 | 20 | 99 | 6.66e-13 | 68.9 |
| Msa0381400 | AT1G20880.2 | 41.250 | 80 | 46 | 1 | 6 | 84 | 20 | 99 | 1.10e-12 | 68.2 |
| Msa0381400 | AT1G20880.3 | 41.250 | 80 | 46 | 1 | 6 | 84 | 20 | 99 | 1.10e-12 | 68.2 |
| Msa0381400 | AT1G20880.1 | 41.250 | 80 | 46 | 1 | 6 | 84 | 20 | 99 | 1.10e-12 | 68.2 |
| Msa0381400 | AT5G61030.2 | 43.210 | 81 | 44 | 1 | 10 | 88 | 40 | 120 | 1.38e-12 | 68.2 |
| Msa0381400 | AT5G61030.1 | 43.210 | 81 | 44 | 1 | 10 | 88 | 40 | 120 | 1.38e-12 | 68.2 |
| Msa0381400 | AT2G37220.1 | 28.646 | 192 | 130 | 4 | 11 | 195 | 92 | 283 | 1.49e-12 | 67.8 |
| Msa0381400 | AT2G41060.1 | 23.656 | 186 | 126 | 2 | 11 | 192 | 129 | 302 | 4.31e-12 | 67.8 |
| Msa0381400 | AT2G41060.3 | 23.656 | 186 | 126 | 2 | 11 | 192 | 129 | 302 | 4.31e-12 | 67.8 |
| Msa0381400 | AT2G41060.2 | 23.656 | 186 | 126 | 2 | 11 | 192 | 129 | 302 | 4.31e-12 | 67.8 |
| Msa0381400 | AT3G16380.1 | 25.843 | 267 | 165 | 11 | 6 | 265 | 198 | 438 | 4.97e-12 | 67.8 |
| Msa0381400 | AT5G53720.1 | 41.026 | 78 | 46 | 0 | 115 | 192 | 7 | 84 | 5.97e-12 | 62.0 |
| Msa0381400 | AT1G01080.1 | 29.082 | 196 | 125 | 5 | 10 | 202 | 108 | 292 | 6.55e-12 | 66.2 |
| Msa0381400 | AT2G18510.1 | 25.714 | 245 | 145 | 8 | 10 | 242 | 25 | 244 | 6.70e-12 | 66.6 |
| Msa0381400 | AT2G16940.5 | 28.495 | 186 | 125 | 4 | 6 | 189 | 37 | 216 | 9.13e-12 | 66.6 |
| Msa0381400 | AT2G16940.4 | 28.495 | 186 | 125 | 4 | 6 | 189 | 37 | 216 | 9.13e-12 | 66.6 |
| Msa0381400 | AT1G03457.1 | 25.279 | 269 | 155 | 8 | 6 | 270 | 8 | 234 | 1.10e-11 | 66.2 |
| Msa0381400 | AT1G22330.1 | 33.929 | 112 | 63 | 3 | 6 | 106 | 13 | 124 | 1.17e-11 | 65.5 |
| Msa0381400 | AT1G71770.1 | 25.974 | 231 | 140 | 9 | 12 | 226 | 241 | 456 | 1.44e-11 | 66.2 |
| Msa0381400 | AT1G71770.2 | 25.974 | 231 | 140 | 9 | 12 | 226 | 241 | 456 | 1.44e-11 | 66.2 |
| Msa0381400 | AT5G54900.1 | 25.969 | 258 | 141 | 10 | 3 | 250 | 147 | 364 | 1.45e-11 | 65.9 |
| Msa0381400 | AT1G60650.2 | 35.714 | 112 | 70 | 2 | 9 | 118 | 11 | 122 | 1.64e-11 | 64.7 |
| Msa0381400 | AT1G60650.1 | 35.714 | 112 | 70 | 2 | 9 | 118 | 11 | 122 | 1.64e-11 | 64.7 |
| Msa0381400 | AT1G74230.1 | 45.455 | 77 | 41 | 1 | 10 | 85 | 34 | 110 | 2.02e-11 | 64.7 |
| Msa0381400 | AT4G16280.4 | 26.776 | 183 | 103 | 5 | 7 | 184 | 42 | 198 | 3.40e-11 | 65.1 |
| Msa0381400 | AT4G34110.1 | 24.812 | 266 | 158 | 11 | 12 | 262 | 217 | 455 | 3.40e-11 | 65.1 |
| Msa0381400 | AT4G34110.1 | 21.296 | 216 | 145 | 6 | 12 | 224 | 126 | 319 | 9.57e-11 | 63.9 |
| Msa0381400 | AT4G16280.2 | 26.230 | 183 | 104 | 4 | 7 | 184 | 117 | 273 | 3.93e-11 | 65.1 |
| Msa0381400 | AT1G22910.2 | 36.250 | 80 | 50 | 1 | 6 | 84 | 9 | 88 | 4.29e-11 | 63.2 |
| Msa0381400 | AT1G22910.1 | 36.250 | 80 | 50 | 1 | 6 | 84 | 9 | 88 | 4.74e-11 | 62.8 |
| Msa0381400 | AT4G03110.2 | 25.379 | 264 | 154 | 8 | 11 | 270 | 19 | 243 | 5.54e-11 | 64.3 |
| Msa0381400 | AT2G16940.2 | 27.419 | 186 | 127 | 4 | 6 | 189 | 227 | 406 | 5.77e-11 | 64.3 |
| Msa0381400 | AT5G04280.1 | 40.698 | 86 | 50 | 1 | 118 | 202 | 8 | 93 | 7.11e-11 | 63.2 |
| Msa0381400 | AT4G16280.3 | 26.776 | 183 | 103 | 5 | 7 | 184 | 117 | 273 | 7.18e-11 | 63.9 |
| Msa0381400 | AT2G16940.1 | 27.419 | 186 | 127 | 4 | 6 | 189 | 178 | 357 | 8.34e-11 | 63.9 |
Find 118 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTGATTTGGGGATTT+AGG | 0.140816 | 3_1:+83475034 | Msa0381400:five_prime_UTR |
| ATGCAAAACGTCACCGTATT+TGG | 0.184645 | 3_1:-83475164 | None:intergenic |
| CAAGATACCCATCTTATTCT+TGG | 0.209187 | 3_1:+83475277 | Msa0381400:CDS |
| CGTCACCGTATTTGGTAAAA+TGG | 0.226718 | 3_1:-83475156 | None:intergenic |
| TCAATTGATTTGGGGATTTA+GGG | 0.262100 | 3_1:+83475035 | Msa0381400:five_prime_UTR |
| TAGGTAGTGGTGCCGGAAAT+TGG | 0.271241 | 3_1:+83476188 | Msa0381400:CDS |
| CGGATGTTTATAGGAACTTA+TGG | 0.290314 | 3_1:+83476065 | Msa0381400:CDS |
| CAGTGCCATGAATTTCAAAA+TGG | 0.298628 | 3_1:+83475066 | Msa0381400:exon |
| TGTTGTAGCTGTTCACTTCT+CGG | 0.300233 | 3_1:-83475509 | None:intergenic |
| CAGCTCCATCGGATGTTTAT+AGG | 0.312533 | 3_1:+83476056 | Msa0381400:CDS |
| TACGGGTGGGTATGGGTATG+GGG | 0.336881 | 3_1:+83476021 | Msa0381400:CDS |
| CCTACTAGTGATGGAGTATA+TGG | 0.341321 | 3_1:+83475965 | Msa0381400:CDS |
| ACCCGAATCCCTAGAGGTTT+CGG | 0.349926 | 3_1:+83475211 | Msa0381400:CDS |
| GGTGGTAGTGTTGGAATAGT+AGG | 0.365653 | 3_1:+83476169 | Msa0381400:CDS |
| AGGTAGTGGTGCCGGAAATT+GGG | 0.368504 | 3_1:+83476189 | Msa0381400:CDS |
| CTACGGGTGGGTATGGGTAT+GGG | 0.381893 | 3_1:+83476020 | Msa0381400:CDS |
| CCTACGGGTGGGTATGGGTA+TGG | 0.383326 | 3_1:+83476019 | Msa0381400:CDS |
| TGGTACCCTACGGGTGGGTA+TGG | 0.397098 | 3_1:+83476013 | Msa0381400:CDS |
| AACCGAAACCTCTAGGGATT+CGG | 0.398030 | 3_1:-83475213 | None:intergenic |
| ACCGAAACCTCTAGGGATTC+GGG | 0.400700 | 3_1:-83475212 | None:intergenic |
| ATAAGATATAAGAGTGATAG+AGG | 0.401002 | 3_1:+83475872 | Msa0381400:CDS |
| AAGAGGTACTTTGAGAGGTT+TGG | 0.403952 | 3_1:+83475653 | Msa0381400:CDS |
| AATGTGGGAATGAACATATT+AGG | 0.405130 | 3_1:+83475576 | Msa0381400:CDS |
| AGCTTTAGCAACAGAGTAAA+GGG | 0.407476 | 3_1:+83475009 | Msa0381400:five_prime_UTR |
| ACAAATCCATTGACAATATG+AGG | 0.410512 | 3_1:-83476259 | None:intergenic |
| GACCAGCCTCATATTGTCAA+TGG | 0.418491 | 3_1:+83476253 | Msa0381400:CDS |
| GCTGTATATAGGTAGAAGTT+AGG | 0.446414 | 3_1:+83475477 | Msa0381400:intron |
| TTACCTTTGCCTACTAGTGA+TGG | 0.454799 | 3_1:+83475956 | Msa0381400:CDS |
| AACTGATGTCGTGGTGATGC+AGG | 0.456579 | 3_1:+83475682 | Msa0381400:CDS |
| ACGGGTGGGTATGGGTATGG+GGG | 0.458994 | 3_1:+83476022 | Msa0381400:CDS |
| GTAGGCAGGTGGAGGTTAAG+AGG | 0.461437 | 3_1:+83475804 | Msa0381400:CDS |
| TATGGTGGGCAAATGGTAAC+TGG | 0.461446 | 3_1:+83476088 | Msa0381400:CDS |
| AGAGGGCAGTTCCGAGGGAG+GGG | 0.471408 | 3_1:+83475822 | Msa0381400:CDS |
| GAATAAGATGGGTATCTTGA+AGG | 0.478134 | 3_1:-83475273 | None:intergenic |
| CTATGGTTGTTGGTACCCTA+CGG | 0.479004 | 3_1:+83476003 | Msa0381400:CDS |
| AAGCTTTAGCAACAGAGTAA+AGG | 0.484233 | 3_1:+83475008 | Msa0381400:five_prime_UTR |
| ATTTGTTACAGACCCAAGAA+TGG | 0.485190 | 3_1:-83476221 | None:intergenic |
| AGGGAACATGTTTCCTGCCA+TGG | 0.485899 | 3_1:+83475928 | Msa0381400:CDS |
| GGTACCCTACGGGTGGGTAT+GGG | 0.489172 | 3_1:+83476014 | Msa0381400:CDS |
| TCATGACTTGAATGGTAGGC+AGG | 0.489984 | 3_1:+83475790 | Msa0381400:CDS |
| CAAAATCAATTACAGAATAG+AGG | 0.490800 | 3_1:+83475530 | Msa0381400:CDS |
| AGTTTAAGAGGTACTTTGAG+AGG | 0.492503 | 3_1:+83475648 | Msa0381400:CDS |
| CTTATGGTATGGTGGGCAAA+TGG | 0.494724 | 3_1:+83476081 | Msa0381400:CDS |
| TGGTCCTCAGGCTTATCATC+AGG | 0.495120 | 3_1:+83476108 | Msa0381400:CDS |
| GTAACGAAACCGAAACCTCT+AGG | 0.497010 | 3_1:-83475220 | None:intergenic |
| GGTTAAGAGGGCAGTTCCGA+GGG | 0.504393 | 3_1:+83475817 | Msa0381400:CDS |
| GGTAGTGGTGCCGGAAATTG+GGG | 0.509354 | 3_1:+83476190 | Msa0381400:CDS |
| CCATCTTATTCTTGGACGAA+AGG | 0.510048 | 3_1:+83475285 | Msa0381400:CDS |
| GCTATAGTGGTTACGAATGT+GGG | 0.511670 | 3_1:+83475561 | Msa0381400:CDS |
| TGTCTGTGGAAGAGTTTAAG+AGG | 0.514084 | 3_1:+83475636 | Msa0381400:CDS |
| TTCAATATGCCATCGCCTCA+TGG | 0.514604 | 3_1:+83476286 | Msa0381400:CDS |
| CCTTTCGTCCAAGAATAAGA+TGG | 0.515929 | 3_1:-83475285 | None:intergenic |
| CGTAGGGTACCAACAACCAT+AGG | 0.517439 | 3_1:-83476002 | None:intergenic |
| CATGGTGTAAAGCAGATTGT+TGG | 0.518341 | 3_1:+83476304 | Msa0381400:CDS |
| AGAGGAGCGAATAGCTATAG+TGG | 0.519443 | 3_1:+83475548 | Msa0381400:CDS |
| TGAGGCGATGGCATATTGAA+TGG | 0.519793 | 3_1:-83476283 | None:intergenic |
| GCAAATGGTAACTGGTCCTC+AGG | 0.523351 | 3_1:+83476096 | Msa0381400:CDS |
| GATCAAATCCCTATGGTTGT+TGG | 0.523642 | 3_1:+83475993 | Msa0381400:CDS |
| CCATATACTCCATCACTAGT+AGG | 0.526921 | 3_1:-83475965 | None:intergenic |
| AGCTATAGTGGTTACGAATG+TGG | 0.527900 | 3_1:+83475560 | Msa0381400:CDS |
| GTTTATAGGAACTTATGGTA+TGG | 0.531836 | 3_1:+83476070 | Msa0381400:CDS |
| GAATCAACATTCCCCTCCCT+CGG | 0.539260 | 3_1:-83475833 | None:intergenic |
| CGGGTGGGTATGGGTATGGG+GGG | 0.541423 | 3_1:+83476023 | Msa0381400:CDS |
| CTCTAGGGATTCGGGTGGTG+CGG | 0.543791 | 3_1:-83475204 | None:intergenic |
| TAGGCAGGTGGAGGTTAAGA+GGG | 0.544226 | 3_1:+83475805 | Msa0381400:CDS |
| AATAAGATGGGTATCTTGAA+GGG | 0.544817 | 3_1:-83475272 | None:intergenic |
| TATAGGAACTTATGGTATGG+TGG | 0.545556 | 3_1:+83476073 | Msa0381400:CDS |
| ATGGCAGGAAACATGTTCCC+TGG | 0.546559 | 3_1:-83475926 | None:intergenic |
| ACATGTTCCCTGGACTAGAA+TGG | 0.547477 | 3_1:-83475916 | None:intergenic |
| GAGGGGAATGTTGATTCTGA+GGG | 0.551220 | 3_1:+83475839 | Msa0381400:CDS |
| ATAGGAACTTATGGTATGGT+GGG | 0.551798 | 3_1:+83476074 | Msa0381400:CDS |
| ATCCATTGACAATATGAGGC+TGG | 0.552395 | 3_1:-83476255 | None:intergenic |
| CTTTCGTCCAAGAATAAGAT+GGG | 0.555266 | 3_1:-83475284 | None:intergenic |
| AAAGGTAAAGGAGCCATGGC+AGG | 0.555428 | 3_1:-83475941 | None:intergenic |
| AATGCCACCGACGAAGAGCT+TGG | 0.555484 | 3_1:-83475101 | None:intergenic |
| TATGGTTGTTGGTACCCTAC+GGG | 0.556496 | 3_1:+83476004 | Msa0381400:CDS |
| AGTGATGGAGTATATGGATA+CGG | 0.560073 | 3_1:+83475971 | Msa0381400:CDS |
| AGGCAAAGGTAAAGGAGCCA+TGG | 0.560567 | 3_1:-83475945 | None:intergenic |
| TCACTAGTAGGCAAAGGTAA+AGG | 0.562957 | 3_1:-83475953 | None:intergenic |
| TGCTTTACACCATGAGGCGA+TGG | 0.564045 | 3_1:-83476295 | None:intergenic |
| AAGAGGGCAGTTCCGAGGGA+GGG | 0.564061 | 3_1:+83475821 | Msa0381400:CDS |
| CTTGAATGGTAGGCAGGTGG+AGG | 0.564078 | 3_1:+83475796 | Msa0381400:CDS |
| GAATGGATATGCAGCTCCAT+CGG | 0.572859 | 3_1:+83476045 | Msa0381400:CDS |
| TAAGAGGGCAGTTCCGAGGG+AGG | 0.576798 | 3_1:+83475820 | Msa0381400:CDS |
| GGAGGGGAATGTTGATTCTG+AGG | 0.578456 | 3_1:+83475838 | Msa0381400:CDS |
| TCTTCCACAGACATATTAGC+AGG | 0.580172 | 3_1:-83475626 | None:intergenic |
| ATAGTGTAACTCATAGGCCG+AGG | 0.580477 | 3_1:+83475705 | Msa0381400:CDS |
| ATGTCAAGTGTTGTATATGT+AGG | 0.581727 | 3_1:+83476148 | Msa0381400:CDS |
| TAACGAAACCGAAACCTCTA+GGG | 0.582846 | 3_1:-83475219 | None:intergenic |
| GGTTGTTGGTACCCTACGGG+TGG | 0.587178 | 3_1:+83476007 | Msa0381400:CDS |
| GGAATAGTAGGTAGTGGTGC+CGG | 0.589920 | 3_1:+83476181 | Msa0381400:CDS |
| AGGTTAAGAGGGCAGTTCCG+AGG | 0.593306 | 3_1:+83475816 | Msa0381400:CDS |
| GATAAAGCCAAGCTCTTCGT+CGG | 0.601660 | 3_1:+83475094 | Msa0381400:CDS |
| TGCAGGATAGTGTAACTCAT+AGG | 0.602760 | 3_1:+83475699 | Msa0381400:CDS |
| TAGTGTAACTCATAGGCCGA+GGG | 0.612340 | 3_1:+83475706 | Msa0381400:CDS |
| GGATACGGATCAAATCCCTA+TGG | 0.612447 | 3_1:+83475986 | Msa0381400:CDS |
| CTTGACATAACATTAGCGTA+AGG | 0.614433 | 3_1:-83476133 | None:intergenic |
| GTAGGGTACCAACAACCATA+GGG | 0.623021 | 3_1:-83476001 | None:intergenic |
| GTATATGTAGGTGGTAGTGT+TGG | 0.626577 | 3_1:+83476160 | Msa0381400:CDS |
| AAGTTCCTATAAACATCCGA+TGG | 0.628220 | 3_1:-83476061 | None:intergenic |
| GTTGTTGGTACCCTACGGGT+GGG | 0.634108 | 3_1:+83476008 | Msa0381400:CDS |
| ACTCCATCACTAGTAGGCAA+AGG | 0.634270 | 3_1:-83475959 | None:intergenic |
| CCATACCCATACCCACCCGT+AGG | 0.634708 | 3_1:-83476019 | None:intergenic |
| TGACTTGAATGGTAGGCAGG+TGG | 0.636473 | 3_1:+83475793 | Msa0381400:CDS |
| CATACCCATACCCACCCGTA+GGG | 0.641911 | 3_1:-83476018 | None:intergenic |
| TTTACCTGCTAATATGTCTG+TGG | 0.643615 | 3_1:+83475622 | Msa0381400:CDS |
| AGTGTTGGAATAGTAGGTAG+TGG | 0.645738 | 3_1:+83476175 | Msa0381400:CDS |
| AAAGCCAAGCTCTTCGTCGG+TGG | 0.645926 | 3_1:+83475097 | Msa0381400:CDS |
| TGGTCGAATAACTGATGTCG+TGG | 0.654008 | 3_1:+83475673 | Msa0381400:CDS |
| CGCACCACCCGAATCCCTAG+AGG | 0.656654 | 3_1:+83475205 | Msa0381400:CDS |
| ATATAAGAGTGATAGAGGAG+CGG | 0.665022 | 3_1:+83475877 | Msa0381400:CDS |
| TCAAGTGTTGTATATGTAGG+TGG | 0.672547 | 3_1:+83476151 | Msa0381400:CDS |
| ACAATCTGCTTTACACCATG+AGG | 0.677423 | 3_1:-83476301 | None:intergenic |
| GTGTAACTCATAGGCCGAGG+GGG | 0.683925 | 3_1:+83475708 | Msa0381400:CDS |
| GGCACCTGATGATAAGCCTG+AGG | 0.693812 | 3_1:-83476112 | None:intergenic |
| AGTGTAACTCATAGGCCGAG+GGG | 0.715312 | 3_1:+83475707 | Msa0381400:CDS |
| GAAACCTCTAGGGATTCGGG+TGG | 0.730884 | 3_1:-83475209 | None:intergenic |
| GTAGTGGTGCCGGAAATTGG+GGG | 0.748996 | 3_1:+83476191 | Msa0381400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGTGAAAACAAAAAATTA+AGG | - | chr3_1:83475352-83475371 | None:intergenic | 15.0% |
| !! | AAAGTGAAAACAAAAAATTA+AGG | - | chr3_1:83475352-83475371 | None:intergenic | 15.0% |
| !! | TAAAGGGTTTTCAATTGATT+TGG | + | chr3_1:83475025-83475044 | Msa0381400:five_prime_UTR | 25.0% |
| !!! | AAAGGGTTTTCAATTGATTT+GGG | + | chr3_1:83475026-83475045 | Msa0381400:five_prime_UTR | 25.0% |
| !!! | AGAATCCATTTTGAAATTCA+TGG | - | chr3_1:83475074-83475093 | None:intergenic | 25.0% |
| !! | AAACACCATTTTACCAAATA+CGG | + | chr3_1:83475151-83475170 | Msa0381400:CDS | 25.0% |
| ! | GTAAATTGTGTTTGTTTGAT+TGG | + | chr3_1:83475444-83475463 | Msa0381400:intron | 25.0% |
| ! | CAAAATCAATTACAGAATAG+AGG | + | chr3_1:83475530-83475549 | Msa0381400:CDS | 25.0% |
| ! | ATAAGATATAAGAGTGATAG+AGG | + | chr3_1:83475872-83475891 | Msa0381400:CDS | 25.0% |
| !! | TAAAGGGTTTTCAATTGATT+TGG | + | chr3_1:83475025-83475044 | Msa0381400:five_prime_UTR | 25.0% |
| !!! | AAAGGGTTTTCAATTGATTT+GGG | + | chr3_1:83475026-83475045 | Msa0381400:five_prime_UTR | 25.0% |
| !!! | AGAATCCATTTTGAAATTCA+TGG | - | chr3_1:83475074-83475093 | None:intergenic | 25.0% |
| !! | AAACACCATTTTACCAAATA+CGG | + | chr3_1:83475151-83475170 | Msa0381400:CDS | 25.0% |
| ! | GTAAATTGTGTTTGTTTGAT+TGG | + | chr3_1:83475444-83475463 | Msa0381400:intron | 25.0% |
| ! | CAAAATCAATTACAGAATAG+AGG | + | chr3_1:83475530-83475549 | Msa0381400:CDS | 25.0% |
| ! | ATAAGATATAAGAGTGATAG+AGG | + | chr3_1:83475872-83475891 | Msa0381400:CDS | 25.0% |
| !!! | AAGGGTTTTCAATTGATTTG+GGG | + | chr3_1:83475027-83475046 | Msa0381400:five_prime_UTR | 30.0% |
| !! | TTCAATTGATTTGGGGATTT+AGG | + | chr3_1:83475034-83475053 | Msa0381400:five_prime_UTR | 30.0% |
| !! | TCAATTGATTTGGGGATTTA+GGG | + | chr3_1:83475035-83475054 | Msa0381400:five_prime_UTR | 30.0% |
| AATAAGATGGGTATCTTGAA+GGG | - | chr3_1:83475275-83475294 | None:intergenic | 30.0% | |
| !! | TGTTTGTTTGATTGGTTTCA+TGG | + | chr3_1:83475452-83475471 | Msa0381400:intron | 30.0% |
| AATGTGGGAATGAACATATT+AGG | + | chr3_1:83475576-83475595 | Msa0381400:CDS | 30.0% | |
| ! | AGGACTAAGAAGATTTTTGT+TGG | + | chr3_1:83475596-83475615 | Msa0381400:CDS | 30.0% |
| ! | ACTAAGAAGATTTTTGTTGG+TGG | + | chr3_1:83475599-83475618 | Msa0381400:CDS | 30.0% |
| !! | TACTTTTGATTCTGAAGACT+CGG | + | chr3_1:83475742-83475761 | Msa0381400:CDS | 30.0% |
| ! | ACAAGTTTTCATGACTTGAA+TGG | + | chr3_1:83475782-83475801 | Msa0381400:CDS | 30.0% |
| GTTTATAGGAACTTATGGTA+TGG | + | chr3_1:83476070-83476089 | Msa0381400:CDS | 30.0% | |
| ! | ATGTCAAGTGTTGTATATGT+AGG | + | chr3_1:83476148-83476167 | Msa0381400:CDS | 30.0% |
| ACAAATCCATTGACAATATG+AGG | - | chr3_1:83476262-83476281 | None:intergenic | 30.0% | |
| !!! | TCAAGTTTTAAAGGAAGCAA+TGG | + | chr3_1:83476331-83476350 | Msa0381400:CDS | 30.0% |
| !!! | AAGGGTTTTCAATTGATTTG+GGG | + | chr3_1:83475027-83475046 | Msa0381400:five_prime_UTR | 30.0% |
| !! | TTCAATTGATTTGGGGATTT+AGG | + | chr3_1:83475034-83475053 | Msa0381400:five_prime_UTR | 30.0% |
| !! | TCAATTGATTTGGGGATTTA+GGG | + | chr3_1:83475035-83475054 | Msa0381400:five_prime_UTR | 30.0% |
| AATAAGATGGGTATCTTGAA+GGG | - | chr3_1:83475275-83475294 | None:intergenic | 30.0% | |
| !! | TGTTTGTTTGATTGGTTTCA+TGG | + | chr3_1:83475452-83475471 | Msa0381400:intron | 30.0% |
| AATGTGGGAATGAACATATT+AGG | + | chr3_1:83475576-83475595 | Msa0381400:CDS | 30.0% | |
| ! | AGGACTAAGAAGATTTTTGT+TGG | + | chr3_1:83475596-83475615 | Msa0381400:CDS | 30.0% |
| ! | ACTAAGAAGATTTTTGTTGG+TGG | + | chr3_1:83475599-83475618 | Msa0381400:CDS | 30.0% |
| !! | TACTTTTGATTCTGAAGACT+CGG | + | chr3_1:83475742-83475761 | Msa0381400:CDS | 30.0% |
| ! | ACAAGTTTTCATGACTTGAA+TGG | + | chr3_1:83475782-83475801 | Msa0381400:CDS | 30.0% |
| GTTTATAGGAACTTATGGTA+TGG | + | chr3_1:83476070-83476089 | Msa0381400:CDS | 30.0% | |
| ! | ATGTCAAGTGTTGTATATGT+AGG | + | chr3_1:83476148-83476167 | Msa0381400:CDS | 30.0% |
| ACAAATCCATTGACAATATG+AGG | - | chr3_1:83476262-83476281 | None:intergenic | 30.0% | |
| !!! | TCAAGTTTTAAAGGAAGCAA+TGG | + | chr3_1:83476331-83476350 | Msa0381400:CDS | 30.0% |
| ! | AAGCTTTAGCAACAGAGTAA+AGG | + | chr3_1:83475008-83475027 | Msa0381400:five_prime_UTR | 35.0% |
| ! | AGCTTTAGCAACAGAGTAAA+GGG | + | chr3_1:83475009-83475028 | Msa0381400:five_prime_UTR | 35.0% |
| CAGTGCCATGAATTTCAAAA+TGG | + | chr3_1:83475066-83475085 | Msa0381400:exon | 35.0% | |
| GAATAAGATGGGTATCTTGA+AGG | - | chr3_1:83475276-83475295 | None:intergenic | 35.0% | |
| CAAGATACCCATCTTATTCT+TGG | + | chr3_1:83475277-83475296 | Msa0381400:CDS | 35.0% | |
| CTTTCGTCCAAGAATAAGAT+GGG | - | chr3_1:83475287-83475306 | None:intergenic | 35.0% | |
| TTATTCTTGGACGAAAGGTT+CGG | + | chr3_1:83475290-83475309 | Msa0381400:intron | 35.0% | |
| GTTTCATGGTTGCTGTATAT+AGG | + | chr3_1:83475466-83475485 | Msa0381400:intron | 35.0% | |
| GCTGTATATAGGTAGAAGTT+AGG | + | chr3_1:83475477-83475496 | Msa0381400:intron | 35.0% | |
| TTTACCTGCTAATATGTCTG+TGG | + | chr3_1:83475622-83475641 | Msa0381400:CDS | 35.0% | |
| !! | AGTTTAAGAGGTACTTTGAG+AGG | + | chr3_1:83475648-83475667 | Msa0381400:CDS | 35.0% |
| ! | GTTTTCATGACTTGAATGGT+AGG | + | chr3_1:83475786-83475805 | Msa0381400:CDS | 35.0% |
| ATATAAGAGTGATAGAGGAG+CGG | + | chr3_1:83475877-83475896 | Msa0381400:CDS | 35.0% | |
| ! | AGTGATGGAGTATATGGATA+CGG | + | chr3_1:83475971-83475990 | Msa0381400:CDS | 35.0% |
| AAGTTCCTATAAACATCCGA+TGG | - | chr3_1:83476064-83476083 | None:intergenic | 35.0% | |
| CGGATGTTTATAGGAACTTA+TGG | + | chr3_1:83476065-83476084 | Msa0381400:CDS | 35.0% | |
| TATAGGAACTTATGGTATGG+TGG | + | chr3_1:83476073-83476092 | Msa0381400:CDS | 35.0% | |
| ATAGGAACTTATGGTATGGT+GGG | + | chr3_1:83476074-83476093 | Msa0381400:CDS | 35.0% | |
| CTTGACATAACATTAGCGTA+AGG | - | chr3_1:83476136-83476155 | None:intergenic | 35.0% | |
| ! | TCAAGTGTTGTATATGTAGG+TGG | + | chr3_1:83476151-83476170 | Msa0381400:CDS | 35.0% |
| ! | ATTTGTTACAGACCCAAGAA+TGG | - | chr3_1:83476224-83476243 | None:intergenic | 35.0% |
| ! | AAGCTTTAGCAACAGAGTAA+AGG | + | chr3_1:83475008-83475027 | Msa0381400:five_prime_UTR | 35.0% |
| ! | AGCTTTAGCAACAGAGTAAA+GGG | + | chr3_1:83475009-83475028 | Msa0381400:five_prime_UTR | 35.0% |
| CAGTGCCATGAATTTCAAAA+TGG | + | chr3_1:83475066-83475085 | Msa0381400:exon | 35.0% | |
| GAATAAGATGGGTATCTTGA+AGG | - | chr3_1:83475276-83475295 | None:intergenic | 35.0% | |
| CAAGATACCCATCTTATTCT+TGG | + | chr3_1:83475277-83475296 | Msa0381400:CDS | 35.0% | |
| CTTTCGTCCAAGAATAAGAT+GGG | - | chr3_1:83475287-83475306 | None:intergenic | 35.0% | |
| TTATTCTTGGACGAAAGGTT+CGG | + | chr3_1:83475290-83475309 | Msa0381400:intron | 35.0% | |
| GTTTCATGGTTGCTGTATAT+AGG | + | chr3_1:83475466-83475485 | Msa0381400:intron | 35.0% | |
| GCTGTATATAGGTAGAAGTT+AGG | + | chr3_1:83475477-83475496 | Msa0381400:intron | 35.0% | |
| TTTACCTGCTAATATGTCTG+TGG | + | chr3_1:83475622-83475641 | Msa0381400:CDS | 35.0% | |
| !! | AGTTTAAGAGGTACTTTGAG+AGG | + | chr3_1:83475648-83475667 | Msa0381400:CDS | 35.0% |
| ! | GTTTTCATGACTTGAATGGT+AGG | + | chr3_1:83475786-83475805 | Msa0381400:CDS | 35.0% |
| ATATAAGAGTGATAGAGGAG+CGG | + | chr3_1:83475877-83475896 | Msa0381400:CDS | 35.0% | |
| ! | AGTGATGGAGTATATGGATA+CGG | + | chr3_1:83475971-83475990 | Msa0381400:CDS | 35.0% |
| AAGTTCCTATAAACATCCGA+TGG | - | chr3_1:83476064-83476083 | None:intergenic | 35.0% | |
| CGGATGTTTATAGGAACTTA+TGG | + | chr3_1:83476065-83476084 | Msa0381400:CDS | 35.0% | |
| TATAGGAACTTATGGTATGG+TGG | + | chr3_1:83476073-83476092 | Msa0381400:CDS | 35.0% | |
| ATAGGAACTTATGGTATGGT+GGG | + | chr3_1:83476074-83476093 | Msa0381400:CDS | 35.0% | |
| CTTGACATAACATTAGCGTA+AGG | - | chr3_1:83476136-83476155 | None:intergenic | 35.0% | |
| ! | TCAAGTGTTGTATATGTAGG+TGG | + | chr3_1:83476151-83476170 | Msa0381400:CDS | 35.0% |
| ! | ATTTGTTACAGACCCAAGAA+TGG | - | chr3_1:83476224-83476243 | None:intergenic | 35.0% |
| CGTCACCGTATTTGGTAAAA+TGG | - | chr3_1:83475159-83475178 | None:intergenic | 40.0% | |
| ATGCAAAACGTCACCGTATT+TGG | - | chr3_1:83475167-83475186 | None:intergenic | 40.0% | |
| TAACGAAACCGAAACCTCTA+GGG | - | chr3_1:83475222-83475241 | None:intergenic | 40.0% | |
| CCTTTCGTCCAAGAATAAGA+TGG | - | chr3_1:83475288-83475307 | None:intergenic | 40.0% | |
| CCATCTTATTCTTGGACGAA+AGG | + | chr3_1:83475285-83475304 | Msa0381400:CDS | 40.0% | |
| TGTTGTAGCTGTTCACTTCT+CGG | - | chr3_1:83475512-83475531 | None:intergenic | 40.0% | |
| AGCTATAGTGGTTACGAATG+TGG | + | chr3_1:83475560-83475579 | Msa0381400:CDS | 40.0% | |
| GCTATAGTGGTTACGAATGT+GGG | + | chr3_1:83475561-83475580 | Msa0381400:CDS | 40.0% | |
| TCTTCCACAGACATATTAGC+AGG | - | chr3_1:83475629-83475648 | None:intergenic | 40.0% | |
| TGTCTGTGGAAGAGTTTAAG+AGG | + | chr3_1:83475636-83475655 | Msa0381400:CDS | 40.0% | |
| !! | AAGAGGTACTTTGAGAGGTT+TGG | + | chr3_1:83475653-83475672 | Msa0381400:CDS | 40.0% |
| TGCAGGATAGTGTAACTCAT+AGG | + | chr3_1:83475699-83475718 | Msa0381400:CDS | 40.0% | |
| ! | AGTTTTCACCATTCTAGTCC+AGG | + | chr3_1:83475908-83475927 | Msa0381400:CDS | 40.0% |
| ! | GTTTTCACCATTCTAGTCCA+GGG | + | chr3_1:83475909-83475928 | Msa0381400:CDS | 40.0% |
| TCACTAGTAGGCAAAGGTAA+AGG | - | chr3_1:83475956-83475975 | None:intergenic | 40.0% | |
| TTACCTTTGCCTACTAGTGA+TGG | + | chr3_1:83475956-83475975 | Msa0381400:CDS | 40.0% | |
| CCATATACTCCATCACTAGT+AGG | - | chr3_1:83475968-83475987 | None:intergenic | 40.0% | |
| ! | CCTACTAGTGATGGAGTATA+TGG | + | chr3_1:83475965-83475984 | Msa0381400:CDS | 40.0% |
| GATCAAATCCCTATGGTTGT+TGG | + | chr3_1:83475993-83476012 | Msa0381400:CDS | 40.0% | |
| ! | GTATATGTAGGTGGTAGTGT+TGG | + | chr3_1:83476160-83476179 | Msa0381400:CDS | 40.0% |
| ! | AGTGTTGGAATAGTAGGTAG+TGG | + | chr3_1:83476175-83476194 | Msa0381400:CDS | 40.0% |
| ATCCATTGACAATATGAGGC+TGG | - | chr3_1:83476258-83476277 | None:intergenic | 40.0% | |
| ACAATCTGCTTTACACCATG+AGG | - | chr3_1:83476304-83476323 | None:intergenic | 40.0% | |
| CATGGTGTAAAGCAGATTGT+TGG | + | chr3_1:83476304-83476323 | Msa0381400:CDS | 40.0% | |
| !! | GTTGGCGCTTCAAGTTTTAA+AGG | + | chr3_1:83476322-83476341 | Msa0381400:CDS | 40.0% |
| CGTCACCGTATTTGGTAAAA+TGG | - | chr3_1:83475159-83475178 | None:intergenic | 40.0% | |
| ATGCAAAACGTCACCGTATT+TGG | - | chr3_1:83475167-83475186 | None:intergenic | 40.0% | |
| TAACGAAACCGAAACCTCTA+GGG | - | chr3_1:83475222-83475241 | None:intergenic | 40.0% | |
| CCTTTCGTCCAAGAATAAGA+TGG | - | chr3_1:83475288-83475307 | None:intergenic | 40.0% | |
| CCATCTTATTCTTGGACGAA+AGG | + | chr3_1:83475285-83475304 | Msa0381400:CDS | 40.0% | |
| TGTTGTAGCTGTTCACTTCT+CGG | - | chr3_1:83475512-83475531 | None:intergenic | 40.0% | |
| AGCTATAGTGGTTACGAATG+TGG | + | chr3_1:83475560-83475579 | Msa0381400:CDS | 40.0% | |
| GCTATAGTGGTTACGAATGT+GGG | + | chr3_1:83475561-83475580 | Msa0381400:CDS | 40.0% | |
| TCTTCCACAGACATATTAGC+AGG | - | chr3_1:83475629-83475648 | None:intergenic | 40.0% | |
| TGTCTGTGGAAGAGTTTAAG+AGG | + | chr3_1:83475636-83475655 | Msa0381400:CDS | 40.0% | |
| !! | AAGAGGTACTTTGAGAGGTT+TGG | + | chr3_1:83475653-83475672 | Msa0381400:CDS | 40.0% |
| TGCAGGATAGTGTAACTCAT+AGG | + | chr3_1:83475699-83475718 | Msa0381400:CDS | 40.0% | |
| ! | AGTTTTCACCATTCTAGTCC+AGG | + | chr3_1:83475908-83475927 | Msa0381400:CDS | 40.0% |
| ! | GTTTTCACCATTCTAGTCCA+GGG | + | chr3_1:83475909-83475928 | Msa0381400:CDS | 40.0% |
| TCACTAGTAGGCAAAGGTAA+AGG | - | chr3_1:83475956-83475975 | None:intergenic | 40.0% | |
| TTACCTTTGCCTACTAGTGA+TGG | + | chr3_1:83475956-83475975 | Msa0381400:CDS | 40.0% | |
| CCATATACTCCATCACTAGT+AGG | - | chr3_1:83475968-83475987 | None:intergenic | 40.0% | |
| ! | CCTACTAGTGATGGAGTATA+TGG | + | chr3_1:83475965-83475984 | Msa0381400:CDS | 40.0% |
| GATCAAATCCCTATGGTTGT+TGG | + | chr3_1:83475993-83476012 | Msa0381400:CDS | 40.0% | |
| ! | GTATATGTAGGTGGTAGTGT+TGG | + | chr3_1:83476160-83476179 | Msa0381400:CDS | 40.0% |
| ! | AGTGTTGGAATAGTAGGTAG+TGG | + | chr3_1:83476175-83476194 | Msa0381400:CDS | 40.0% |
| ATCCATTGACAATATGAGGC+TGG | - | chr3_1:83476258-83476277 | None:intergenic | 40.0% | |
| ACAATCTGCTTTACACCATG+AGG | - | chr3_1:83476304-83476323 | None:intergenic | 40.0% | |
| CATGGTGTAAAGCAGATTGT+TGG | + | chr3_1:83476304-83476323 | Msa0381400:CDS | 40.0% | |
| !! | GTTGGCGCTTCAAGTTTTAA+AGG | + | chr3_1:83476322-83476341 | Msa0381400:CDS | 40.0% |
| GATAAAGCCAAGCTCTTCGT+CGG | + | chr3_1:83475094-83475113 | Msa0381400:CDS | 45.0% | |
| ! | AACCGAAACCTCTAGGGATT+CGG | - | chr3_1:83475216-83475235 | None:intergenic | 45.0% |
| GTAACGAAACCGAAACCTCT+AGG | - | chr3_1:83475223-83475242 | None:intergenic | 45.0% | |
| AGAGGAGCGAATAGCTATAG+TGG | + | chr3_1:83475548-83475567 | Msa0381400:CDS | 45.0% | |
| TGGTCGAATAACTGATGTCG+TGG | + | chr3_1:83475673-83475692 | Msa0381400:CDS | 45.0% | |
| ATAGTGTAACTCATAGGCCG+AGG | + | chr3_1:83475705-83475724 | Msa0381400:CDS | 45.0% | |
| TAGTGTAACTCATAGGCCGA+GGG | + | chr3_1:83475706-83475725 | Msa0381400:CDS | 45.0% | |
| GTAATAAACCCAAACCCCCT+CGG | - | chr3_1:83475725-83475744 | None:intergenic | 45.0% | |
| TCATGACTTGAATGGTAGGC+AGG | + | chr3_1:83475790-83475809 | Msa0381400:CDS | 45.0% | |
| !! | GAGGGGAATGTTGATTCTGA+GGG | + | chr3_1:83475839-83475858 | Msa0381400:CDS | 45.0% |
| ! | ACATGTTCCCTGGACTAGAA+TGG | - | chr3_1:83475919-83475938 | None:intergenic | 45.0% |
| ACTCCATCACTAGTAGGCAA+AGG | - | chr3_1:83475962-83475981 | None:intergenic | 45.0% | |
| GGATACGGATCAAATCCCTA+TGG | + | chr3_1:83475986-83476005 | Msa0381400:CDS | 45.0% | |
| ! | GTAGGGTACCAACAACCATA+GGG | - | chr3_1:83476004-83476023 | None:intergenic | 45.0% |
| CTATGGTTGTTGGTACCCTA+CGG | + | chr3_1:83476003-83476022 | Msa0381400:CDS | 45.0% | |
| TATGGTTGTTGGTACCCTAC+GGG | + | chr3_1:83476004-83476023 | Msa0381400:CDS | 45.0% | |
| GAATGGATATGCAGCTCCAT+CGG | + | chr3_1:83476045-83476064 | Msa0381400:CDS | 45.0% | |
| CAGCTCCATCGGATGTTTAT+AGG | + | chr3_1:83476056-83476075 | Msa0381400:CDS | 45.0% | |
| !! | CTTATGGTATGGTGGGCAAA+TGG | + | chr3_1:83476081-83476100 | Msa0381400:CDS | 45.0% |
| !! | TATGGTGGGCAAATGGTAAC+TGG | + | chr3_1:83476088-83476107 | Msa0381400:CDS | 45.0% |
| ! | GGTGGTAGTGTTGGAATAGT+AGG | + | chr3_1:83476169-83476188 | Msa0381400:CDS | 45.0% |
| GGAATTGTACCCCCAATTTC+CGG | - | chr3_1:83476203-83476222 | None:intergenic | 45.0% | |
| ! | TGGGGGTACAATTCCATTCT+TGG | + | chr3_1:83476208-83476227 | Msa0381400:CDS | 45.0% |
| ! | GGGGGTACAATTCCATTCTT+GGG | + | chr3_1:83476209-83476228 | Msa0381400:CDS | 45.0% |
| GACCAGCCTCATATTGTCAA+TGG | + | chr3_1:83476253-83476272 | Msa0381400:CDS | 45.0% | |
| TGAGGCGATGGCATATTGAA+TGG | - | chr3_1:83476286-83476305 | None:intergenic | 45.0% | |
| TTCAATATGCCATCGCCTCA+TGG | + | chr3_1:83476286-83476305 | Msa0381400:CDS | 45.0% | |
| GATAAAGCCAAGCTCTTCGT+CGG | + | chr3_1:83475094-83475113 | Msa0381400:CDS | 45.0% | |
| ! | AACCGAAACCTCTAGGGATT+CGG | - | chr3_1:83475216-83475235 | None:intergenic | 45.0% |
| GTAACGAAACCGAAACCTCT+AGG | - | chr3_1:83475223-83475242 | None:intergenic | 45.0% | |
| AGAGGAGCGAATAGCTATAG+TGG | + | chr3_1:83475548-83475567 | Msa0381400:CDS | 45.0% | |
| TGGTCGAATAACTGATGTCG+TGG | + | chr3_1:83475673-83475692 | Msa0381400:CDS | 45.0% | |
| ATAGTGTAACTCATAGGCCG+AGG | + | chr3_1:83475705-83475724 | Msa0381400:CDS | 45.0% | |
| TAGTGTAACTCATAGGCCGA+GGG | + | chr3_1:83475706-83475725 | Msa0381400:CDS | 45.0% | |
| GTAATAAACCCAAACCCCCT+CGG | - | chr3_1:83475725-83475744 | None:intergenic | 45.0% | |
| TCATGACTTGAATGGTAGGC+AGG | + | chr3_1:83475790-83475809 | Msa0381400:CDS | 45.0% | |
| !! | GAGGGGAATGTTGATTCTGA+GGG | + | chr3_1:83475839-83475858 | Msa0381400:CDS | 45.0% |
| ! | ACATGTTCCCTGGACTAGAA+TGG | - | chr3_1:83475919-83475938 | None:intergenic | 45.0% |
| ACTCCATCACTAGTAGGCAA+AGG | - | chr3_1:83475962-83475981 | None:intergenic | 45.0% | |
| GGATACGGATCAAATCCCTA+TGG | + | chr3_1:83475986-83476005 | Msa0381400:CDS | 45.0% | |
| ! | GTAGGGTACCAACAACCATA+GGG | - | chr3_1:83476004-83476023 | None:intergenic | 45.0% |
| CTATGGTTGTTGGTACCCTA+CGG | + | chr3_1:83476003-83476022 | Msa0381400:CDS | 45.0% | |
| TATGGTTGTTGGTACCCTAC+GGG | + | chr3_1:83476004-83476023 | Msa0381400:CDS | 45.0% | |
| GAATGGATATGCAGCTCCAT+CGG | + | chr3_1:83476045-83476064 | Msa0381400:CDS | 45.0% | |
| CAGCTCCATCGGATGTTTAT+AGG | + | chr3_1:83476056-83476075 | Msa0381400:CDS | 45.0% | |
| !! | CTTATGGTATGGTGGGCAAA+TGG | + | chr3_1:83476081-83476100 | Msa0381400:CDS | 45.0% |
| !! | TATGGTGGGCAAATGGTAAC+TGG | + | chr3_1:83476088-83476107 | Msa0381400:CDS | 45.0% |
| ! | GGTGGTAGTGTTGGAATAGT+AGG | + | chr3_1:83476169-83476188 | Msa0381400:CDS | 45.0% |
| GGAATTGTACCCCCAATTTC+CGG | - | chr3_1:83476203-83476222 | None:intergenic | 45.0% | |
| ! | TGGGGGTACAATTCCATTCT+TGG | + | chr3_1:83476208-83476227 | Msa0381400:CDS | 45.0% |
| ! | GGGGGTACAATTCCATTCTT+GGG | + | chr3_1:83476209-83476228 | Msa0381400:CDS | 45.0% |
| GACCAGCCTCATATTGTCAA+TGG | + | chr3_1:83476253-83476272 | Msa0381400:CDS | 45.0% | |
| TGAGGCGATGGCATATTGAA+TGG | - | chr3_1:83476286-83476305 | None:intergenic | 45.0% | |
| TTCAATATGCCATCGCCTCA+TGG | + | chr3_1:83476286-83476305 | Msa0381400:CDS | 45.0% | |
| ACCCGAATCCCTAGAGGTTT+CGG | + | chr3_1:83475211-83475230 | Msa0381400:CDS | 50.0% | |
| ! | ACCGAAACCTCTAGGGATTC+GGG | - | chr3_1:83475215-83475234 | None:intergenic | 50.0% |
| ! | AACTGATGTCGTGGTGATGC+AGG | + | chr3_1:83475682-83475701 | Msa0381400:CDS | 50.0% |
| AGTGTAACTCATAGGCCGAG+GGG | + | chr3_1:83475707-83475726 | Msa0381400:CDS | 50.0% | |
| TGACTTGAATGGTAGGCAGG+TGG | + | chr3_1:83475793-83475812 | Msa0381400:CDS | 50.0% | |
| TAGGCAGGTGGAGGTTAAGA+GGG | + | chr3_1:83475805-83475824 | Msa0381400:CDS | 50.0% | |
| GAATCAACATTCCCCTCCCT+CGG | - | chr3_1:83475836-83475855 | None:intergenic | 50.0% | |
| !! | GGAGGGGAATGTTGATTCTG+AGG | + | chr3_1:83475838-83475857 | Msa0381400:CDS | 50.0% |
| ATGGCAGGAAACATGTTCCC+TGG | - | chr3_1:83475929-83475948 | None:intergenic | 50.0% | |
| AGGGAACATGTTTCCTGCCA+TGG | + | chr3_1:83475928-83475947 | Msa0381400:CDS | 50.0% | |
| AAAGGTAAAGGAGCCATGGC+AGG | - | chr3_1:83475944-83475963 | None:intergenic | 50.0% | |
| AGGCAAAGGTAAAGGAGCCA+TGG | - | chr3_1:83475948-83475967 | None:intergenic | 50.0% | |
| ! | CGTAGGGTACCAACAACCAT+AGG | - | chr3_1:83476005-83476024 | None:intergenic | 50.0% |
| GCAAATGGTAACTGGTCCTC+AGG | + | chr3_1:83476096-83476115 | Msa0381400:CDS | 50.0% | |
| TGGTCCTCAGGCTTATCATC+AGG | + | chr3_1:83476108-83476127 | Msa0381400:CDS | 50.0% | |
| ! | GGAATAGTAGGTAGTGGTGC+CGG | + | chr3_1:83476181-83476200 | Msa0381400:CDS | 50.0% |
| ! | TAGGTAGTGGTGCCGGAAAT+TGG | + | chr3_1:83476188-83476207 | Msa0381400:CDS | 50.0% |
| ! | AGGTAGTGGTGCCGGAAATT+GGG | + | chr3_1:83476189-83476208 | Msa0381400:CDS | 50.0% |
| TGCTTTACACCATGAGGCGA+TGG | - | chr3_1:83476298-83476317 | None:intergenic | 50.0% | |
| ACCCGAATCCCTAGAGGTTT+CGG | + | chr3_1:83475211-83475230 | Msa0381400:CDS | 50.0% | |
| ! | ACCGAAACCTCTAGGGATTC+GGG | - | chr3_1:83475215-83475234 | None:intergenic | 50.0% |
| ! | AACTGATGTCGTGGTGATGC+AGG | + | chr3_1:83475682-83475701 | Msa0381400:CDS | 50.0% |
| AGTGTAACTCATAGGCCGAG+GGG | + | chr3_1:83475707-83475726 | Msa0381400:CDS | 50.0% | |
| TGACTTGAATGGTAGGCAGG+TGG | + | chr3_1:83475793-83475812 | Msa0381400:CDS | 50.0% | |
| TAGGCAGGTGGAGGTTAAGA+GGG | + | chr3_1:83475805-83475824 | Msa0381400:CDS | 50.0% | |
| GAATCAACATTCCCCTCCCT+CGG | - | chr3_1:83475836-83475855 | None:intergenic | 50.0% | |
| !! | GGAGGGGAATGTTGATTCTG+AGG | + | chr3_1:83475838-83475857 | Msa0381400:CDS | 50.0% |
| ATGGCAGGAAACATGTTCCC+TGG | - | chr3_1:83475929-83475948 | None:intergenic | 50.0% | |
| AGGGAACATGTTTCCTGCCA+TGG | + | chr3_1:83475928-83475947 | Msa0381400:CDS | 50.0% | |
| AAAGGTAAAGGAGCCATGGC+AGG | - | chr3_1:83475944-83475963 | None:intergenic | 50.0% | |
| AGGCAAAGGTAAAGGAGCCA+TGG | - | chr3_1:83475948-83475967 | None:intergenic | 50.0% | |
| ! | CGTAGGGTACCAACAACCAT+AGG | - | chr3_1:83476005-83476024 | None:intergenic | 50.0% |
| GCAAATGGTAACTGGTCCTC+AGG | + | chr3_1:83476096-83476115 | Msa0381400:CDS | 50.0% | |
| TGGTCCTCAGGCTTATCATC+AGG | + | chr3_1:83476108-83476127 | Msa0381400:CDS | 50.0% | |
| ! | GGAATAGTAGGTAGTGGTGC+CGG | + | chr3_1:83476181-83476200 | Msa0381400:CDS | 50.0% |
| ! | TAGGTAGTGGTGCCGGAAAT+TGG | + | chr3_1:83476188-83476207 | Msa0381400:CDS | 50.0% |
| ! | AGGTAGTGGTGCCGGAAATT+GGG | + | chr3_1:83476189-83476208 | Msa0381400:CDS | 50.0% |
| TGCTTTACACCATGAGGCGA+TGG | - | chr3_1:83476298-83476317 | None:intergenic | 50.0% | |
| AAAGCCAAGCTCTTCGTCGG+TGG | + | chr3_1:83475097-83475116 | Msa0381400:CDS | 55.0% | |
| AATGCCACCGACGAAGAGCT+TGG | - | chr3_1:83475104-83475123 | None:intergenic | 55.0% | |
| ! | GAAACCTCTAGGGATTCGGG+TGG | - | chr3_1:83475212-83475231 | None:intergenic | 55.0% |
| GTGTAACTCATAGGCCGAGG+GGG | + | chr3_1:83475708-83475727 | Msa0381400:CDS | 55.0% | |
| CTTGAATGGTAGGCAGGTGG+AGG | + | chr3_1:83475796-83475815 | Msa0381400:CDS | 55.0% | |
| GTAGGCAGGTGGAGGTTAAG+AGG | + | chr3_1:83475804-83475823 | Msa0381400:CDS | 55.0% | |
| AGGTTAAGAGGGCAGTTCCG+AGG | + | chr3_1:83475816-83475835 | Msa0381400:CDS | 55.0% | |
| GGTTAAGAGGGCAGTTCCGA+GGG | + | chr3_1:83475817-83475836 | Msa0381400:CDS | 55.0% | |
| GTTGTTGGTACCCTACGGGT+GGG | + | chr3_1:83476008-83476027 | Msa0381400:CDS | 55.0% | |
| CATACCCATACCCACCCGTA+GGG | - | chr3_1:83476021-83476040 | None:intergenic | 55.0% | |
| CTACGGGTGGGTATGGGTAT+GGG | + | chr3_1:83476020-83476039 | Msa0381400:CDS | 55.0% | |
| TACGGGTGGGTATGGGTATG+GGG | + | chr3_1:83476021-83476040 | Msa0381400:CDS | 55.0% | |
| GGCACCTGATGATAAGCCTG+AGG | - | chr3_1:83476115-83476134 | None:intergenic | 55.0% | |
| ! | GGTAGTGGTGCCGGAAATTG+GGG | + | chr3_1:83476190-83476209 | Msa0381400:CDS | 55.0% |
| ! | GTAGTGGTGCCGGAAATTGG+GGG | + | chr3_1:83476191-83476210 | Msa0381400:CDS | 55.0% |
| AAAGCCAAGCTCTTCGTCGG+TGG | + | chr3_1:83475097-83475116 | Msa0381400:CDS | 55.0% | |
| AATGCCACCGACGAAGAGCT+TGG | - | chr3_1:83475104-83475123 | None:intergenic | 55.0% | |
| ! | GAAACCTCTAGGGATTCGGG+TGG | - | chr3_1:83475212-83475231 | None:intergenic | 55.0% |
| GTGTAACTCATAGGCCGAGG+GGG | + | chr3_1:83475708-83475727 | Msa0381400:CDS | 55.0% | |
| CTTGAATGGTAGGCAGGTGG+AGG | + | chr3_1:83475796-83475815 | Msa0381400:CDS | 55.0% | |
| GTAGGCAGGTGGAGGTTAAG+AGG | + | chr3_1:83475804-83475823 | Msa0381400:CDS | 55.0% | |
| AGGTTAAGAGGGCAGTTCCG+AGG | + | chr3_1:83475816-83475835 | Msa0381400:CDS | 55.0% | |
| GGTTAAGAGGGCAGTTCCGA+GGG | + | chr3_1:83475817-83475836 | Msa0381400:CDS | 55.0% | |
| GTTGTTGGTACCCTACGGGT+GGG | + | chr3_1:83476008-83476027 | Msa0381400:CDS | 55.0% | |
| CATACCCATACCCACCCGTA+GGG | - | chr3_1:83476021-83476040 | None:intergenic | 55.0% | |
| CTACGGGTGGGTATGGGTAT+GGG | + | chr3_1:83476020-83476039 | Msa0381400:CDS | 55.0% | |
| TACGGGTGGGTATGGGTATG+GGG | + | chr3_1:83476021-83476040 | Msa0381400:CDS | 55.0% | |
| GGCACCTGATGATAAGCCTG+AGG | - | chr3_1:83476115-83476134 | None:intergenic | 55.0% | |
| ! | GGTAGTGGTGCCGGAAATTG+GGG | + | chr3_1:83476190-83476209 | Msa0381400:CDS | 55.0% |
| ! | GTAGTGGTGCCGGAAATTGG+GGG | + | chr3_1:83476191-83476210 | Msa0381400:CDS | 55.0% |
| ! | CTCTAGGGATTCGGGTGGTG+CGG | - | chr3_1:83475207-83475226 | None:intergenic | 60.0% |
| ACTCATAGGCCGAGGGGGTT+TGG | + | chr3_1:83475713-83475732 | Msa0381400:CDS | 60.0% | |
| CTCATAGGCCGAGGGGGTTT+GGG | + | chr3_1:83475714-83475733 | Msa0381400:CDS | 60.0% | |
| TAAGAGGGCAGTTCCGAGGG+AGG | + | chr3_1:83475820-83475839 | Msa0381400:CDS | 60.0% | |
| AAGAGGGCAGTTCCGAGGGA+GGG | + | chr3_1:83475821-83475840 | Msa0381400:CDS | 60.0% | |
| GGTTGTTGGTACCCTACGGG+TGG | + | chr3_1:83476007-83476026 | Msa0381400:CDS | 60.0% | |
| TGGTACCCTACGGGTGGGTA+TGG | + | chr3_1:83476013-83476032 | Msa0381400:CDS | 60.0% | |
| GGTACCCTACGGGTGGGTAT+GGG | + | chr3_1:83476014-83476033 | Msa0381400:CDS | 60.0% | |
| CCATACCCATACCCACCCGT+AGG | - | chr3_1:83476022-83476041 | None:intergenic | 60.0% | |
| CCTACGGGTGGGTATGGGTA+TGG | + | chr3_1:83476019-83476038 | Msa0381400:CDS | 60.0% | |
| ACGGGTGGGTATGGGTATGG+GGG | + | chr3_1:83476022-83476041 | Msa0381400:CDS | 60.0% | |
| GGGTATGGGTATGGGGGGAA+TGG | + | chr3_1:83476028-83476047 | Msa0381400:CDS | 60.0% | |
| ! | CTCTAGGGATTCGGGTGGTG+CGG | - | chr3_1:83475207-83475226 | None:intergenic | 60.0% |
| ACTCATAGGCCGAGGGGGTT+TGG | + | chr3_1:83475713-83475732 | Msa0381400:CDS | 60.0% | |
| CTCATAGGCCGAGGGGGTTT+GGG | + | chr3_1:83475714-83475733 | Msa0381400:CDS | 60.0% | |
| TAAGAGGGCAGTTCCGAGGG+AGG | + | chr3_1:83475820-83475839 | Msa0381400:CDS | 60.0% | |
| AAGAGGGCAGTTCCGAGGGA+GGG | + | chr3_1:83475821-83475840 | Msa0381400:CDS | 60.0% | |
| GGTTGTTGGTACCCTACGGG+TGG | + | chr3_1:83476007-83476026 | Msa0381400:CDS | 60.0% | |
| TGGTACCCTACGGGTGGGTA+TGG | + | chr3_1:83476013-83476032 | Msa0381400:CDS | 60.0% | |
| GGTACCCTACGGGTGGGTAT+GGG | + | chr3_1:83476014-83476033 | Msa0381400:CDS | 60.0% | |
| CCATACCCATACCCACCCGT+AGG | - | chr3_1:83476022-83476041 | None:intergenic | 60.0% | |
| CCTACGGGTGGGTATGGGTA+TGG | + | chr3_1:83476019-83476038 | Msa0381400:CDS | 60.0% | |
| ACGGGTGGGTATGGGTATGG+GGG | + | chr3_1:83476022-83476041 | Msa0381400:CDS | 60.0% | |
| GGGTATGGGTATGGGGGGAA+TGG | + | chr3_1:83476028-83476047 | Msa0381400:CDS | 60.0% | |
| CGCACCACCCGAATCCCTAG+AGG | + | chr3_1:83475205-83475224 | Msa0381400:CDS | 65.0% | |
| AGAGGGCAGTTCCGAGGGAG+GGG | + | chr3_1:83475822-83475841 | Msa0381400:CDS | 65.0% | |
| CGGGTGGGTATGGGTATGGG+GGG | + | chr3_1:83476023-83476042 | Msa0381400:CDS | 65.0% | |
| CGCACCACCCGAATCCCTAG+AGG | + | chr3_1:83475205-83475224 | Msa0381400:CDS | 65.0% | |
| AGAGGGCAGTTCCGAGGGAG+GGG | + | chr3_1:83475822-83475841 | Msa0381400:CDS | 65.0% | |
| CGGGTGGGTATGGGTATGGG+GGG | + | chr3_1:83476023-83476042 | Msa0381400:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 83474987 | 83476369 | 83474987 | ID=Msa0381400;Name=Msa0381400 |
| chr3_1 | mRNA | 83474987 | 83476369 | 83474987 | ID=Msa0381400-mRNA-1;Parent=Msa0381400;Name=Msa0381400-mRNA-1;_AED=0.00;_eAED=0.00;_QI=86|1|0.5|1|1|1|2|0|371 |
| chr3_1 | exon | 83474987 | 83475306 | 83474987 | ID=Msa0381400-mRNA-1:exon:21463;Parent=Msa0381400-mRNA-1 |
| chr3_1 | exon | 83475488 | 83476369 | 83475488 | ID=Msa0381400-mRNA-1:exon:21464;Parent=Msa0381400-mRNA-1 |
| chr3_1 | five_prime_UTR | 83474987 | 83475072 | 83474987 | ID=Msa0381400-mRNA-1:five_prime_utr;Parent=Msa0381400-mRNA-1 |
| chr3_1 | CDS | 83475073 | 83475306 | 83475073 | ID=Msa0381400-mRNA-1:cds;Parent=Msa0381400-mRNA-1 |
| chr3_1 | CDS | 83475488 | 83476369 | 83475488 | ID=Msa0381400-mRNA-1:cds;Parent=Msa0381400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
