Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061853.t1 | XP_003625462.1 | 95.7 | 139 | 5 | 1 | 1 | 139 | 1 | 138 | 2.00E-64 | 255 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061853.t1 | Q41228 | 55.3 | 141 | 61 | 1 | 1 | 139 | 1 | 141 | 2.5e-31 | 136.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061853.t1 | G7KZJ5 | 95.7 | 139 | 5 | 1 | 1 | 139 | 1 | 138 | 1.5e-64 | 255.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene061853 | 0.825387 | 4.82E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene061853 | 0.896028 | 5.46E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene061853 | 0.854511 | 1.17E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene061853 | 0.864614 | 1.07E-64 | -1.69E-46 |
| MS.gene049222 | MS.gene061853 | 0.899756 | 1.45E-77 | -1.69E-46 |
| MS.gene049232 | MS.gene061853 | 0.815272 | 1.01E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene061853 | 0.903762 | 2.48E-79 | -1.69E-46 |
| MS.gene049320 | MS.gene061853 | 0.930987 | 7.34E-94 | -1.69E-46 |
| MS.gene04939 | MS.gene061853 | 0.80784 | 4.15E-50 | -1.69E-46 |
| MS.gene049427 | MS.gene061853 | 0.804431 | 2.17E-49 | -1.69E-46 |
| MS.gene049609 | MS.gene061853 | 0.915962 | 3.15E-85 | -1.69E-46 |
| MS.gene049611 | MS.gene061853 | -0.800319 | 1.52E-48 | -1.69E-46 |
| MS.gene049615 | MS.gene061853 | 0.806304 | 8.78E-50 | -1.69E-46 |
| MS.gene049633 | MS.gene061853 | 0.869736 | 2.48E-66 | -1.69E-46 |
| MS.gene049634 | MS.gene061853 | -0.80998 | 1.45E-50 | -1.69E-46 |
| MS.gene049805 | MS.gene061853 | 0.851202 | 1.03E-60 | -1.69E-46 |
| MS.gene05010 | MS.gene061853 | 0.864505 | 1.16E-64 | -1.69E-46 |
| MS.gene050163 | MS.gene061853 | 0.886196 | 4.22E-72 | -1.69E-46 |
| MS.gene050165 | MS.gene061853 | 0.886774 | 2.55E-72 | -1.69E-46 |
| MS.gene050170 | MS.gene061853 | 0.814645 | 1.39E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene061853 | 0.830723 | 2.50E-55 | -1.69E-46 |
| MS.gene050333 | MS.gene061853 | 0.883096 | 5.99E-71 | -1.69E-46 |
| MS.gene050432 | MS.gene061853 | 0.820199 | 7.78E-53 | -1.69E-46 |
| MS.gene050444 | MS.gene061853 | 0.860984 | 1.41E-63 | -1.69E-46 |
| MS.gene050496 | MS.gene061853 | 0.836952 | 6.92E-57 | -1.69E-46 |
| MS.gene050504 | MS.gene061853 | 0.887679 | 1.15E-72 | -1.69E-46 |
| MS.gene050518 | MS.gene061853 | 0.879363 | 1.32E-69 | -1.69E-46 |
| MS.gene050538 | MS.gene061853 | 0.838459 | 2.84E-57 | -1.69E-46 |
| MS.gene050577 | MS.gene061853 | 0.841523 | 4.51E-58 | -1.69E-46 |
| MS.gene050593 | MS.gene061853 | 0.871596 | 6.06E-67 | -1.69E-46 |
| MS.gene050612 | MS.gene061853 | 0.907643 | 4.06E-81 | -1.69E-46 |
| MS.gene050662 | MS.gene061853 | 0.809792 | 1.59E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene061853 | 0.894304 | 2.80E-75 | -1.69E-46 |
| MS.gene050690 | MS.gene061853 | 0.818941 | 1.51E-52 | -1.69E-46 |
| MS.gene050699 | MS.gene061853 | 0.912135 | 2.76E-83 | -1.69E-46 |
| MS.gene050747 | MS.gene061853 | 0.851837 | 6.84E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene061853 | 0.816104 | 6.57E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene061853 | 0.817593 | 3.04E-52 | -1.69E-46 |
| MS.gene050772 | MS.gene061853 | 0.924371 | 7.70E-90 | -1.69E-46 |
| MS.gene05079 | MS.gene061853 | -0.812077 | 5.08E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene061853 | 0.868826 | 4.89E-66 | -1.69E-46 |
| MS.gene05081 | MS.gene061853 | 0.817099 | 3.93E-52 | -1.69E-46 |
| MS.gene050868 | MS.gene061853 | 0.847327 | 1.24E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene061853 | 0.843481 | 1.36E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene061853 | 0.810861 | 9.34E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene061853 | 0.816929 | 4.29E-52 | -1.69E-46 |
| MS.gene050950 | MS.gene061853 | 0.847616 | 1.03E-59 | -1.69E-46 |
| MS.gene050986 | MS.gene061853 | 0.898509 | 4.95E-77 | -1.69E-46 |
| MS.gene05100 | MS.gene061853 | 0.860277 | 2.31E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene061853 | 0.839065 | 1.98E-57 | -1.69E-46 |
| MS.gene051127 | MS.gene061853 | -0.803118 | 4.06E-49 | -1.69E-46 |
| MS.gene051138 | MS.gene061853 | -0.800061 | 1.72E-48 | -1.69E-46 |
| MS.gene051167 | MS.gene061853 | -0.802166 | 6.38E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene061853 | 0.891825 | 2.79E-74 | -1.69E-46 |
| MS.gene051268 | MS.gene061853 | 0.800804 | 1.21E-48 | -1.69E-46 |
| MS.gene051317 | MS.gene061853 | 0.834931 | 2.25E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene061853 | -0.809391 | 1.94E-50 | -1.69E-46 |
| MS.gene051366 | MS.gene061853 | -0.817241 | 3.65E-52 | -1.69E-46 |
| MS.gene051434 | MS.gene061853 | 0.807129 | 5.88E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene061853 | 0.867237 | 1.59E-65 | -1.69E-46 |
| MS.gene051617 | MS.gene061853 | 0.8385 | 2.77E-57 | -1.69E-46 |
| MS.gene051666 | MS.gene061853 | 0.875704 | 2.50E-68 | -1.69E-46 |
| MS.gene051692 | MS.gene061853 | 0.804102 | 2.54E-49 | -1.69E-46 |
| MS.gene051694 | MS.gene061853 | 0.831006 | 2.13E-55 | -1.69E-46 |
| MS.gene051810 | MS.gene061853 | 0.907784 | 3.48E-81 | -1.69E-46 |
| MS.gene051838 | MS.gene061853 | 0.843685 | 1.20E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene061853 | 0.882924 | 6.92E-71 | -1.69E-46 |
| MS.gene051874 | MS.gene061853 | 0.809481 | 1.85E-50 | -1.69E-46 |
| MS.gene051949 | MS.gene061853 | 0.885782 | 6.04E-72 | -1.69E-46 |
| MS.gene052164 | MS.gene061853 | 0.851737 | 7.30E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene061853 | 0.849802 | 2.56E-60 | -1.69E-46 |
| MS.gene052379 | MS.gene061853 | 0.845479 | 3.96E-59 | -1.69E-46 |
| MS.gene052421 | MS.gene061853 | 0.801371 | 9.29E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene061853 | 0.810898 | 9.17E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene061853 | 0.818888 | 1.55E-52 | -1.69E-46 |
| MS.gene052486 | MS.gene061853 | 0.818902 | 1.54E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene061853 | 0.801558 | 8.51E-49 | -1.69E-46 |
| MS.gene052503 | MS.gene061853 | 0.837507 | 4.99E-57 | -1.69E-46 |
| MS.gene052504 | MS.gene061853 | 0.817465 | 3.25E-52 | -1.69E-46 |
| MS.gene052506 | MS.gene061853 | 0.846966 | 1.56E-59 | -1.69E-46 |
| MS.gene052510 | MS.gene061853 | 0.812459 | 4.20E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene061853 | 0.857191 | 1.93E-62 | -1.69E-46 |
| MS.gene052820 | MS.gene061853 | 0.805452 | 1.33E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene061853 | 0.864035 | 1.62E-64 | -1.69E-46 |
| MS.gene052823 | MS.gene061853 | 0.827059 | 1.93E-54 | -1.69E-46 |
| MS.gene052825 | MS.gene061853 | 0.824358 | 8.43E-54 | -1.69E-46 |
| MS.gene052870 | MS.gene061853 | 0.839435 | 1.59E-57 | -1.69E-46 |
| MS.gene052872 | MS.gene061853 | 0.845383 | 4.20E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene061853 | 0.849567 | 2.98E-60 | -1.69E-46 |
| MS.gene052966 | MS.gene061853 | 0.854736 | 1.01E-61 | -1.69E-46 |
| MS.gene053009 | MS.gene061853 | 0.854608 | 1.10E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene061853 | 0.814612 | 1.41E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene061853 | 0.867205 | 1.62E-65 | -1.69E-46 |
| MS.gene053203 | MS.gene061853 | 0.869371 | 3.26E-66 | -1.69E-46 |
| MS.gene053207 | MS.gene061853 | 0.909078 | 8.47E-82 | -1.69E-46 |
| MS.gene053209 | MS.gene061853 | 0.812644 | 3.82E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene061853 | 0.90084 | 4.90E-78 | -1.69E-46 |
| MS.gene053286 | MS.gene061853 | 0.895215 | 1.18E-75 | -1.69E-46 |
| MS.gene053322 | MS.gene061853 | 0.841918 | 3.55E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene061853 | -0.815592 | 8.54E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene061853 | 0.833299 | 5.78E-56 | -1.69E-46 |
| MS.gene053449 | MS.gene061853 | 0.821762 | 3.40E-53 | -1.69E-46 |
| MS.gene053479 | MS.gene061853 | 0.828182 | 1.04E-54 | -1.69E-46 |
| MS.gene053480 | MS.gene061853 | 0.813132 | 2.99E-51 | -1.69E-46 |
| MS.gene053561 | MS.gene061853 | -0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene061853 | 0.878412 | 2.87E-69 | -1.69E-46 |
| MS.gene053632 | MS.gene061853 | 0.882847 | 7.39E-71 | -1.69E-46 |
| MS.gene053824 | MS.gene061853 | 0.853313 | 2.60E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene061853 | 0.886362 | 3.65E-72 | -1.69E-46 |
| MS.gene054376 | MS.gene061853 | 0.80441 | 2.19E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene061853 | 0.807871 | 4.09E-50 | -1.69E-46 |
| MS.gene054595 | MS.gene061853 | 0.826552 | 2.55E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene061853 | 0.912946 | 1.09E-83 | -1.69E-46 |
| MS.gene054642 | MS.gene061853 | 0.912304 | 2.27E-83 | -1.69E-46 |
| MS.gene054706 | MS.gene061853 | -0.810593 | 1.07E-50 | -1.69E-46 |
| MS.gene05470 | MS.gene061853 | 0.856139 | 3.94E-62 | -1.69E-46 |
| MS.gene054927 | MS.gene061853 | 0.848258 | 6.87E-60 | -1.69E-46 |
| MS.gene05494 | MS.gene061853 | 0.809726 | 1.64E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene061853 | 0.881634 | 2.04E-70 | -1.69E-46 |
| MS.gene054959 | MS.gene061853 | -0.801562 | 8.49E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene061853 | 0.841836 | 3.73E-58 | -1.69E-46 |
| MS.gene055154 | MS.gene061853 | -0.831255 | 1.85E-55 | -1.69E-46 |
| MS.gene055206 | MS.gene061853 | 0.885161 | 1.03E-71 | -1.69E-46 |
| MS.gene055212 | MS.gene061853 | 0.846855 | 1.67E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene061853 | 0.832626 | 8.49E-56 | -1.69E-46 |
| MS.gene055254 | MS.gene061853 | 0.820938 | 5.27E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene061853 | 0.871446 | 6.79E-67 | -1.69E-46 |
| MS.gene055362 | MS.gene061853 | 0.929736 | 4.53E-93 | -1.69E-46 |
| MS.gene055397 | MS.gene061853 | 0.839995 | 1.14E-57 | -1.69E-46 |
| MS.gene055499 | MS.gene061853 | 0.842941 | 1.90E-58 | -1.69E-46 |
| MS.gene055502 | MS.gene061853 | 0.888866 | 4.04E-73 | -1.69E-46 |
| MS.gene055577 | MS.gene061853 | 0.905728 | 3.16E-80 | -1.69E-46 |
| MS.gene055636 | MS.gene061853 | 0.822353 | 2.48E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene061853 | 0.82976 | 4.30E-55 | -1.69E-46 |
| MS.gene055647 | MS.gene061853 | 0.829065 | 6.34E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene061853 | 0.905005 | 6.77E-80 | -1.69E-46 |
| MS.gene055748 | MS.gene061853 | 0.864155 | 1.49E-64 | -1.69E-46 |
| MS.gene055750 | MS.gene061853 | 0.848848 | 4.72E-60 | -1.69E-46 |
| MS.gene055751 | MS.gene061853 | 0.865204 | 7.00E-65 | -1.69E-46 |
| MS.gene055776 | MS.gene061853 | 0.862387 | 5.26E-64 | -1.69E-46 |
| MS.gene05589 | MS.gene061853 | 0.843005 | 1.83E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene061853 | 0.889486 | 2.32E-73 | -1.69E-46 |
| MS.gene055941 | MS.gene061853 | 0.864914 | 8.63E-65 | -1.69E-46 |
| MS.gene055956 | MS.gene061853 | -0.837962 | 3.81E-57 | -1.69E-46 |
| MS.gene056083 | MS.gene061853 | 0.869989 | 2.05E-66 | -1.69E-46 |
| MS.gene056374 | MS.gene061853 | 0.88878 | 4.36E-73 | -1.69E-46 |
| MS.gene056449 | MS.gene061853 | 0.805279 | 1.44E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene061853 | 0.830939 | 2.21E-55 | -1.69E-46 |
| MS.gene056504 | MS.gene061853 | 0.869296 | 3.44E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene061853 | 0.859413 | 4.21E-63 | -1.69E-46 |
| MS.gene056511 | MS.gene061853 | 0.801323 | 9.51E-49 | -1.69E-46 |
| MS.gene056549 | MS.gene061853 | 0.800431 | 1.45E-48 | -1.69E-46 |
| MS.gene056550 | MS.gene061853 | -0.802876 | 4.56E-49 | -1.69E-46 |
| MS.gene05664 | MS.gene061853 | 0.81309 | 3.05E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene061853 | 0.91168 | 4.62E-83 | -1.69E-46 |
| MS.gene05666 | MS.gene061853 | 0.813669 | 2.28E-51 | -1.69E-46 |
| MS.gene056692 | MS.gene061853 | 0.866001 | 3.92E-65 | -1.69E-46 |
| MS.gene056897 | MS.gene061853 | 0.80892 | 2.44E-50 | -1.69E-46 |
| MS.gene056898 | MS.gene061853 | 0.80318 | 3.94E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene061853 | 0.81156 | 6.59E-51 | -1.69E-46 |
| MS.gene056947 | MS.gene061853 | 0.809949 | 1.47E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene061853 | 0.862415 | 5.15E-64 | -1.69E-46 |
| MS.gene057129 | MS.gene061853 | 0.878656 | 2.35E-69 | -1.69E-46 |
| MS.gene057196 | MS.gene061853 | 0.837477 | 5.08E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene061853 | 0.848313 | 6.64E-60 | -1.69E-46 |
| MS.gene057331 | MS.gene061853 | 0.910927 | 1.08E-82 | -1.69E-46 |
| MS.gene057332 | MS.gene061853 | 0.8263 | 2.93E-54 | -1.69E-46 |
| MS.gene057416 | MS.gene061853 | 0.886774 | 2.55E-72 | -1.69E-46 |
| MS.gene057658 | MS.gene061853 | 0.858081 | 1.05E-62 | -1.69E-46 |
| MS.gene057734 | MS.gene061853 | 0.825898 | 3.65E-54 | -1.69E-46 |
| MS.gene057831 | MS.gene061853 | 0.832199 | 1.08E-55 | -1.69E-46 |
| MS.gene057856 | MS.gene061853 | 0.815572 | 8.63E-52 | -1.69E-46 |
| MS.gene057857 | MS.gene061853 | 0.82214 | 2.78E-53 | -1.69E-46 |
| MS.gene057926 | MS.gene061853 | 0.855869 | 4.72E-62 | -1.69E-46 |
| MS.gene058006 | MS.gene061853 | 0.819488 | 1.13E-52 | -1.69E-46 |
| MS.gene058019 | MS.gene061853 | 0.839526 | 1.50E-57 | -1.69E-46 |
| MS.gene058130 | MS.gene061853 | 0.806987 | 6.30E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene061853 | 0.844082 | 9.42E-59 | -1.69E-46 |
| MS.gene058334 | MS.gene061853 | -0.806678 | 7.32E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene061853 | 0.840058 | 1.09E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene061853 | 0.853044 | 3.10E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene061853 | 0.922902 | 5.37E-89 | -1.69E-46 |
| MS.gene058544 | MS.gene061853 | 0.87289 | 2.25E-67 | -1.69E-46 |
| MS.gene058723 | MS.gene061853 | 0.943118 | 2.14E-102 | -1.69E-46 |
| MS.gene058773 | MS.gene061853 | 0.911162 | 8.30E-83 | -1.69E-46 |
| MS.gene058838 | MS.gene061853 | 0.886946 | 2.20E-72 | -1.69E-46 |
| MS.gene05883 | MS.gene061853 | 0.803451 | 3.46E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene061853 | 0.914239 | 2.42E-84 | -1.69E-46 |
| MS.gene059023 | MS.gene061853 | 0.877907 | 4.31E-69 | -1.69E-46 |
| MS.gene059029 | MS.gene061853 | 0.866537 | 2.65E-65 | -1.69E-46 |
| MS.gene059079 | MS.gene061853 | 0.810155 | 1.33E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene061853 | 0.86659 | 2.55E-65 | -1.69E-46 |
| MS.gene05934 | MS.gene061853 | 0.855688 | 5.33E-62 | -1.69E-46 |
| MS.gene059367 | MS.gene061853 | 0.807575 | 4.73E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene061853 | 0.826124 | 3.22E-54 | -1.69E-46 |
| MS.gene059667 | MS.gene061853 | 0.826283 | 2.95E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene061853 | 0.920278 | 1.57E-87 | -1.69E-46 |
| MS.gene059718 | MS.gene061853 | 0.917003 | 9.00E-86 | -1.69E-46 |
| MS.gene059756 | MS.gene061853 | 0.851727 | 7.35E-61 | -1.69E-46 |
| MS.gene059801 | MS.gene061853 | 0.821787 | 3.35E-53 | -1.69E-46 |
| MS.gene059865 | MS.gene061853 | 0.8793 | 1.39E-69 | -1.69E-46 |
| MS.gene059902 | MS.gene061853 | 0.882858 | 7.32E-71 | -1.69E-46 |
| MS.gene059960 | MS.gene061853 | 0.840613 | 7.82E-58 | -1.69E-46 |
| MS.gene060193 | MS.gene061853 | 0.825664 | 4.14E-54 | -1.69E-46 |
| MS.gene060337 | MS.gene061853 | -0.803695 | 3.08E-49 | -1.69E-46 |
| MS.gene060341 | MS.gene061853 | 0.817647 | 2.96E-52 | -1.69E-46 |
| MS.gene060482 | MS.gene061853 | 0.824894 | 6.30E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene061853 | 0.84725 | 1.30E-59 | -1.69E-46 |
| MS.gene060728 | MS.gene061853 | 0.823621 | 1.25E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene061853 | 0.898127 | 7.19E-77 | -1.69E-46 |
| MS.gene060778 | MS.gene061853 | 0.810409 | 1.17E-50 | -1.69E-46 |
| MS.gene06077 | MS.gene061853 | 0.860973 | 1.42E-63 | -1.69E-46 |
| MS.gene060804 | MS.gene061853 | 0.863455 | 2.46E-64 | -1.69E-46 |
| MS.gene060818 | MS.gene061853 | 0.833946 | 3.98E-56 | -1.69E-46 |
| MS.gene060835 | MS.gene061853 | 0.872374 | 3.34E-67 | -1.69E-46 |
| MS.gene060837 | MS.gene061853 | 0.803745 | 3.01E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene061853 | 0.875826 | 2.27E-68 | -1.69E-46 |
| MS.gene060982 | MS.gene061853 | 0.851313 | 9.63E-61 | -1.69E-46 |
| MS.gene061041 | MS.gene061853 | 0.843822 | 1.11E-58 | -1.69E-46 |
| MS.gene061134 | MS.gene061853 | 0.800776 | 1.23E-48 | -1.69E-46 |
| MS.gene061150 | MS.gene061853 | 0.884637 | 1.62E-71 | -1.69E-46 |
| MS.gene061200 | MS.gene061853 | 0.843669 | 1.22E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061853.t1 | MTR_7g099390 | 95.683 | 139 | 5 | 1 | 1 | 139 | 1 | 138 | 5.46e-93 | 265 |
| MS.gene061853.t1 | MTR_1g069235 | 57.971 | 138 | 47 | 3 | 11 | 138 | 11 | 147 | 8.70e-34 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061853.t1 | AT2G20260 | 52.667 | 150 | 48 | 3 | 6 | 139 | 3 | 145 | 4.08e-38 | 126 |
| MS.gene061853.t1 | AT4G28750 | 66.355 | 107 | 25 | 1 | 43 | 138 | 35 | 141 | 5.45e-32 | 111 |
Find 29 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTCACCTAATAATGTTTC+AGG | 0.245319 | 7.4:+11096853 | MS.gene061853:CDS |
| CCAATTCTAGACTTGTTGTT+AGG | 0.258382 | 7.4:+11096944 | MS.gene061853:CDS |
| CTGTTGCCTGAAACATTATT+AGG | 0.270995 | 7.4:-11096859 | None:intergenic |
| ACACACCTTAGCACCTCTTT+TGG | 0.283501 | 7.4:-11097043 | None:intergenic |
| TTGTTGAATCTTACCACAAC+TGG | 0.285947 | 7.4:-11097626 | None:intergenic |
| ACAACTGGGTAGCGAGTATT+AGG | 0.348189 | 7.4:-11097611 | None:intergenic |
| AACATAGCATCAGCAGCTTC+AGG | 0.370983 | 7.4:+11096823 | MS.gene061853:CDS |
| TCCTACTGGTTCAATGGTAT+TGG | 0.371489 | 7.4:+11097471 | MS.gene061853:CDS |
| TTCTGTTGTTGCTGTTGATC+AGG | 0.388075 | 7.4:+11097494 | MS.gene061853:CDS |
| CCTAACAACAAGTCTAGAAT+TGG | 0.406311 | 7.4:-11096944 | None:intergenic |
| ATCAACAAACAACTATGCTT+TGG | 0.412222 | 7.4:+11097667 | MS.gene061853:CDS |
| TTGGTGTTCTTTGTAGTAGT+AGG | 0.427451 | 7.4:-11096925 | None:intergenic |
| CTATGCTTTGGATGAGATTG+AGG | 0.451083 | 7.4:+11097679 | MS.gene061853:CDS |
| CAATTCTAGACTTGTTGTTA+GGG | 0.467358 | 7.4:+11096945 | MS.gene061853:CDS |
| AAAGAATCCTACTGGTTCAA+TGG | 0.482430 | 7.4:+11097465 | MS.gene061853:CDS |
| TGGTGTTCTTTGTAGTAGTA+GGG | 0.490325 | 7.4:-11096924 | None:intergenic |
| TTCTTAGAAAAGAATCCTAC+TGG | 0.502179 | 7.4:+11097457 | MS.gene061853:CDS |
| GCTGCAACACCAACTGTTGA+AGG | 0.512678 | 7.4:+11096982 | MS.gene061853:CDS |
| CCACCAATTGGTCCCAAAAG+AGG | 0.526898 | 7.4:+11097030 | MS.gene061853:CDS |
| ACATAGCATCAGCAGCTTCA+GGG | 0.527887 | 7.4:+11096824 | MS.gene061853:CDS |
| ACTTGTTGTTAGGGCATCTG+AGG | 0.546313 | 7.4:+11096954 | MS.gene061853:CDS |
| TGGTCCCAAAAGAGGTGCTA+AGG | 0.552862 | 7.4:+11097038 | MS.gene061853:CDS |
| TGTTGTTAGGGCATCTGAGG+AGG | 0.552889 | 7.4:+11096957 | MS.gene061853:CDS |
| GCTGCCTCACCTTCAACAGT+TGG | 0.556449 | 7.4:-11096991 | None:intergenic |
| TAATACTCGCTACCCAGTTG+TGG | 0.602018 | 7.4:+11097613 | MS.gene061853:CDS |
| TGTTGAATCTTACCACAACT+GGG | 0.616418 | 7.4:-11097625 | None:intergenic |
| AACACCAACTGTTGAAGGTG+AGG | 0.628187 | 7.4:+11096987 | MS.gene061853:CDS |
| ATTAGCATCTAGAATGAACA+TGG | 0.637216 | 7.4:+11096894 | MS.gene061853:CDS |
| ACCAATACCATTGAACCAGT+AGG | 0.681839 | 7.4:-11097472 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAAGTATACTTTCATA+CGG | - | chr7.4:11097108-11097127 | None:intergenic | 15.0% |
| !!! | CTAAGTTTTATTTATTTTGT+TGG | + | chr7.4:11097414-11097433 | MS.gene061853:intron | 15.0% |
| !!! | GTAGTTTTTTTTTAGAAATA+TGG | + | chr7.4:11097129-11097148 | MS.gene061853:intron | 15.0% |
| !!! | TTTTTTAGAAATATGGAATT+GGG | + | chr7.4:11097136-11097155 | MS.gene061853:intron | 15.0% |
| !!! | TTTTTTTAGAAATATGGAAT+TGG | + | chr7.4:11097135-11097154 | MS.gene061853:intron | 15.0% |
| !! | AATTTCCAAATTACAAACTA+GGG | - | chr7.4:11097200-11097219 | None:intergenic | 20.0% |
| !! | ATTATAAACTGATAGTAACT+TGG | + | chr7.4:11097341-11097360 | MS.gene061853:intron | 20.0% |
| !! | ATTCTTACTAGAAAAAACTA+AGG | - | chr7.4:11097172-11097191 | None:intergenic | 20.0% |
| !! | TTCTTACTAGAAAAAACTAA+GGG | - | chr7.4:11097171-11097190 | None:intergenic | 20.0% |
| !!! | GTTTTTTCTAGTAAGAATTA+TGG | + | chr7.4:11097174-11097193 | MS.gene061853:intron | 20.0% |
| !!! | TGTTTTTCCTACTAAATTAT+TGG | - | chr7.4:11097382-11097401 | None:intergenic | 20.0% |
| ! | CAATTTCCAAATTACAAACT+AGG | - | chr7.4:11097201-11097220 | None:intergenic | 25.0% |
| ! | TTCATACGGCATAATTTATT+TGG | - | chr7.4:11097094-11097113 | None:intergenic | 25.0% |
| ! | TTGTCAACCAATAATTTAGT+AGG | + | chr7.4:11097372-11097391 | MS.gene061853:intron | 25.0% |
| !! | CTAGTTTGTAATTTGGAAAT+TGG | + | chr7.4:11097199-11097218 | MS.gene061853:intron | 25.0% |
| ATCAACAAACAACTATGCTT+TGG | + | chr7.4:11097667-11097686 | MS.gene061853:CDS | 30.0% | |
| ATCCTACACAACACAATAAA+AGG | - | chr7.4:11097591-11097610 | None:intergenic | 30.0% | |
| CTACTTCAAAATCAATCATG+TGG | + | chr7.4:11097529-11097548 | MS.gene061853:intron | 30.0% | |
| GAAATATGGAATTGGGAAAA+TGG | + | chr7.4:11097143-11097162 | MS.gene061853:intron | 30.0% | |
| TTCTTAGAAAAGAATCCTAC+TGG | + | chr7.4:11097457-11097476 | MS.gene061853:CDS | 30.0% | |
| TTGTCACCTAATAATGTTTC+AGG | + | chr7.4:11096853-11096872 | MS.gene061853:CDS | 30.0% | |
| ! | ATTAGCATCTAGAATGAACA+TGG | + | chr7.4:11096894-11096913 | MS.gene061853:CDS | 30.0% |
| ! | TTCCTTTTATTGTGTTGTGT+AGG | + | chr7.4:11097586-11097605 | MS.gene061853:intron | 30.0% |
| !! | CAATTCTAGACTTGTTGTTA+GGG | + | chr7.4:11096945-11096964 | MS.gene061853:CDS | 30.0% |
| !!! | CACATGATTGATTTTGAAGT+AGG | - | chr7.4:11097531-11097550 | None:intergenic | 30.0% |
| !!! | TTTTGTTGGTTCTACTTAAC+AGG | + | chr7.4:11097428-11097447 | MS.gene061853:intron | 30.0% |
| CTGTTGCCTGAAACATTATT+AGG | - | chr7.4:11096862-11096881 | None:intergenic | 35.0% | |
| TGGTGTTCTTTGTAGTAGTA+GGG | - | chr7.4:11096927-11096946 | None:intergenic | 35.0% | |
| TGTTGAATCTTACCACAACT+GGG | - | chr7.4:11097628-11097647 | None:intergenic | 35.0% | |
| TTGTTGAATCTTACCACAAC+TGG | - | chr7.4:11097629-11097648 | None:intergenic | 35.0% | |
| ! | CCTAACAACAAGTCTAGAAT+TGG | - | chr7.4:11096947-11096966 | None:intergenic | 35.0% |
| ! | TATGGCCCTAGTTTGTAATT+TGG | + | chr7.4:11097192-11097211 | MS.gene061853:intron | 35.0% |
| ! | TGGTTCTACTTAACAGGTTA+AGG | + | chr7.4:11097434-11097453 | MS.gene061853:intron | 35.0% |
| ! | TTGGTGTTCTTTGTAGTAGT+AGG | - | chr7.4:11096928-11096947 | None:intergenic | 35.0% |
| !! | AAAGAATCCTACTGGTTCAA+TGG | + | chr7.4:11097465-11097484 | MS.gene061853:CDS | 35.0% |
| !! | CCAATTCTAGACTTGTTGTT+AGG | + | chr7.4:11096944-11096963 | MS.gene061853:CDS | 35.0% |
| ACCAATACCATTGAACCAGT+AGG | - | chr7.4:11097475-11097494 | None:intergenic | 40.0% | |
| ! | CTATGCTTTGGATGAGATTG+AGG | + | chr7.4:11097679-11097698 | MS.gene061853:CDS | 40.0% |
| ! | TTCTGTTGTTGCTGTTGATC+AGG | + | chr7.4:11097494-11097513 | MS.gene061853:CDS | 40.0% |
| !! | TCCTACTGGTTCAATGGTAT+TGG | + | chr7.4:11097471-11097490 | MS.gene061853:CDS | 40.0% |
| AAAATCAAGCCCCCACCAAT+TGG | + | chr7.4:11097018-11097037 | MS.gene061853:CDS | 45.0% | |
| AACACCAACTGTTGAAGGTG+AGG | + | chr7.4:11096987-11097006 | MS.gene061853:CDS | 45.0% | |
| AACATAGCATCAGCAGCTTC+AGG | + | chr7.4:11096823-11096842 | MS.gene061853:CDS | 45.0% | |
| ACAACTGGGTAGCGAGTATT+AGG | - | chr7.4:11097614-11097633 | None:intergenic | 45.0% | |
| ACATAGCATCAGCAGCTTCA+GGG | + | chr7.4:11096824-11096843 | MS.gene061853:CDS | 45.0% | |
| TAATACTCGCTACCCAGTTG+TGG | + | chr7.4:11097613-11097632 | MS.gene061853:CDS | 45.0% | |
| ! | ACACACCTTAGCACCTCTTT+TGG | - | chr7.4:11097046-11097065 | None:intergenic | 45.0% |
| ! | ATTGGTGGGGGCTTGATTTT+TGG | - | chr7.4:11097018-11097037 | None:intergenic | 45.0% |
| ! | CACACCTTAGCACCTCTTTT+GGG | - | chr7.4:11097045-11097064 | None:intergenic | 45.0% |
| !! | ACTTGTTGTTAGGGCATCTG+AGG | + | chr7.4:11096954-11096973 | MS.gene061853:CDS | 45.0% |
| !!! | CTCTTTTGGGACCAATTGGT+GGG | - | chr7.4:11097032-11097051 | None:intergenic | 45.0% |
| !!! | TCTTTTGGGACCAATTGGTG+GGG | - | chr7.4:11097031-11097050 | None:intergenic | 45.0% |
| !! | AATTATCATATAAATTAAAA+AGG | - | chr7.4:11097245-11097264 | None:intergenic | 5.0% |
| !! | ATTATCATATAAATTAAAAA+GGG | - | chr7.4:11097244-11097263 | None:intergenic | 5.0% |
| CCACCAATTGGTCCCAAAAG+AGG | + | chr7.4:11097030-11097049 | MS.gene061853:CDS | 50.0% | |
| GCTGCAACACCAACTGTTGA+AGG | + | chr7.4:11096982-11097001 | MS.gene061853:CDS | 50.0% | |
| ! | TGTTGTTAGGGCATCTGAGG+AGG | + | chr7.4:11096957-11096976 | MS.gene061853:CDS | 50.0% |
| !! | TGGTCCCAAAAGAGGTGCTA+AGG | + | chr7.4:11097038-11097057 | MS.gene061853:CDS | 50.0% |
| !!! | CCTCTTTTGGGACCAATTGG+TGG | - | chr7.4:11097033-11097052 | None:intergenic | 50.0% |
| !!! | CTTTTGGGACCAATTGGTGG+GGG | - | chr7.4:11097030-11097049 | None:intergenic | 50.0% |
| !!! | GCACCTCTTTTGGGACCAAT+TGG | - | chr7.4:11097036-11097055 | None:intergenic | 50.0% |
| GCTGCCTCACCTTCAACAGT+TGG | - | chr7.4:11096994-11097013 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 11096811 | 11097712 | 11096811 | ID=MS.gene061853 |
| chr7.4 | mRNA | 11096811 | 11097712 | 11096811 | ID=MS.gene061853.t1;Parent=MS.gene061853 |
| chr7.4 | exon | 11096811 | 11097059 | 11096811 | ID=MS.gene061853.t1.exon1;Parent=MS.gene061853.t1 |
| chr7.4 | CDS | 11096811 | 11097059 | 11096811 | ID=cds.MS.gene061853.t1;Parent=MS.gene061853.t1 |
| chr7.4 | exon | 11097450 | 11097515 | 11097450 | ID=MS.gene061853.t1.exon2;Parent=MS.gene061853.t1 |
| chr7.4 | CDS | 11097450 | 11097515 | 11097450 | ID=cds.MS.gene061853.t1;Parent=MS.gene061853.t1 |
| chr7.4 | exon | 11097608 | 11097712 | 11097608 | ID=MS.gene061853.t1.exon3;Parent=MS.gene061853.t1 |
| chr7.4 | CDS | 11097608 | 11097712 | 11097608 | ID=cds.MS.gene061853.t1;Parent=MS.gene061853.t1 |
| Gene Sequence |
| Protein sequence |
