Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33500.t1 | RHN58791.1 | 99.3 | 289 | 2 | 0 | 1 | 289 | 59 | 347 | 1.30E-161 | 578.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33500.t1 | Q07473 | 86.9 | 290 | 37 | 1 | 1 | 289 | 1 | 290 | 6.0e-144 | 511.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33500.t1 | B7FIZ5 | 99.3 | 289 | 2 | 0 | 1 | 289 | 1 | 289 | 9.2e-162 | 578.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene33500 | 0.91278 | 1.31E-83 | -1.69E-46 |
| MS.gene049173 | MS.gene33500 | 0.861551 | 9.47E-64 | -1.69E-46 |
| MS.gene049181 | MS.gene33500 | -0.815624 | 8.40E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene33500 | 0.865831 | 4.44E-65 | -1.69E-46 |
| MS.gene049222 | MS.gene33500 | 0.89658 | 3.22E-76 | -1.69E-46 |
| MS.gene049232 | MS.gene33500 | 0.899765 | 1.43E-77 | -1.69E-46 |
| MS.gene049281 | MS.gene33500 | -0.821992 | 3.01E-53 | -1.69E-46 |
| MS.gene049285 | MS.gene33500 | 0.943136 | 2.07E-102 | -1.69E-46 |
| MS.gene049312 | MS.gene33500 | -0.819038 | 1.43E-52 | -1.69E-46 |
| MS.gene049313 | MS.gene33500 | -0.827192 | 1.79E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene33500 | 0.952449 | 2.36E-110 | -1.69E-46 |
| MS.gene04939 | MS.gene33500 | 0.834354 | 3.15E-56 | -1.69E-46 |
| MS.gene049483 | MS.gene33500 | -0.806424 | 8.28E-50 | -1.69E-46 |
| MS.gene049600 | MS.gene33500 | 0.830532 | 2.79E-55 | -1.69E-46 |
| MS.gene049609 | MS.gene33500 | 0.858416 | 8.37E-63 | -1.69E-46 |
| MS.gene049611 | MS.gene33500 | -0.800543 | 1.37E-48 | -1.69E-46 |
| MS.gene049627 | MS.gene33500 | 0.86266 | 4.33E-64 | -1.69E-46 |
| MS.gene049633 | MS.gene33500 | 0.860811 | 1.59E-63 | -1.69E-46 |
| MS.gene049805 | MS.gene33500 | 0.805727 | 1.16E-49 | -1.69E-46 |
| MS.gene049865 | MS.gene33500 | 0.81538 | 9.53E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene33500 | 0.930217 | 2.26E-93 | -1.69E-46 |
| MS.gene050163 | MS.gene33500 | 0.921843 | 2.12E-88 | -1.69E-46 |
| MS.gene050165 | MS.gene33500 | 0.91951 | 4.12E-87 | -1.69E-46 |
| MS.gene050170 | MS.gene33500 | 0.87571 | 2.49E-68 | -1.69E-46 |
| MS.gene050216 | MS.gene33500 | 0.846734 | 1.80E-59 | -1.69E-46 |
| MS.gene050323 | MS.gene33500 | 0.889917 | 1.58E-73 | -1.69E-46 |
| MS.gene050333 | MS.gene33500 | 0.882789 | 7.76E-71 | -1.69E-46 |
| MS.gene050381 | MS.gene33500 | -0.830054 | 3.65E-55 | -1.69E-46 |
| MS.gene050444 | MS.gene33500 | 0.826524 | 2.59E-54 | -1.69E-46 |
| MS.gene050496 | MS.gene33500 | 0.911113 | 8.78E-83 | -1.69E-46 |
| MS.gene050502 | MS.gene33500 | 0.805369 | 1.38E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene33500 | 0.956087 | 6.72E-114 | -1.69E-46 |
| MS.gene050518 | MS.gene33500 | 0.92266 | 7.36E-89 | -1.69E-46 |
| MS.gene050577 | MS.gene33500 | 0.905323 | 4.85E-80 | -1.69E-46 |
| MS.gene050612 | MS.gene33500 | 0.94533 | 3.73E-104 | -1.69E-46 |
| MS.gene050662 | MS.gene33500 | 0.81057 | 1.08E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene33500 | 0.914882 | 1.14E-84 | -1.69E-46 |
| MS.gene050699 | MS.gene33500 | 0.936282 | 2.23E-97 | -1.69E-46 |
| MS.gene050747 | MS.gene33500 | 0.842012 | 3.35E-58 | -1.69E-46 |
| MS.gene050772 | MS.gene33500 | 0.890537 | 9.01E-74 | -1.69E-46 |
| MS.gene05080 | MS.gene33500 | 0.841074 | 5.92E-58 | -1.69E-46 |
| MS.gene050868 | MS.gene33500 | 0.884727 | 1.50E-71 | -1.69E-46 |
| MS.gene050871 | MS.gene33500 | 0.884956 | 1.23E-71 | -1.69E-46 |
| MS.gene050876 | MS.gene33500 | 0.885755 | 6.18E-72 | -1.69E-46 |
| MS.gene05087 | MS.gene33500 | 0.824636 | 7.25E-54 | -1.69E-46 |
| MS.gene050883 | MS.gene33500 | -0.842486 | 2.51E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene33500 | 0.8549 | 9.04E-62 | -1.69E-46 |
| MS.gene050950 | MS.gene33500 | 0.841345 | 5.03E-58 | -1.69E-46 |
| MS.gene050986 | MS.gene33500 | 0.963365 | 5.37E-122 | -1.69E-46 |
| MS.gene05100 | MS.gene33500 | 0.894195 | 3.10E-75 | -1.69E-46 |
| MS.gene051044 | MS.gene33500 | -0.807324 | 5.34E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene33500 | -0.855059 | 8.13E-62 | -1.69E-46 |
| MS.gene051138 | MS.gene33500 | -0.811486 | 6.83E-51 | -1.69E-46 |
| MS.gene051228 | MS.gene33500 | 0.807694 | 4.46E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene33500 | 0.857596 | 1.47E-62 | -1.69E-46 |
| MS.gene051317 | MS.gene33500 | 0.877456 | 6.19E-69 | -1.69E-46 |
| MS.gene051364 | MS.gene33500 | -0.823624 | 1.25E-53 | -1.69E-46 |
| MS.gene051366 | MS.gene33500 | -0.817679 | 2.91E-52 | -1.69E-46 |
| MS.gene051509 | MS.gene33500 | 0.8286 | 8.21E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene33500 | 0.929299 | 8.49E-93 | -1.69E-46 |
| MS.gene051564 | MS.gene33500 | 0.842397 | 2.65E-58 | -1.69E-46 |
| MS.gene051566 | MS.gene33500 | 0.813074 | 3.08E-51 | -1.69E-46 |
| MS.gene051651 | MS.gene33500 | -0.80616 | 9.41E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene33500 | 0.809825 | 1.56E-50 | -1.69E-46 |
| MS.gene051810 | MS.gene33500 | 0.908821 | 1.12E-81 | -1.69E-46 |
| MS.gene051858 | MS.gene33500 | 0.826111 | 3.25E-54 | -1.69E-46 |
| MS.gene051946 | MS.gene33500 | -0.814835 | 1.26E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene33500 | 0.859586 | 3.73E-63 | -1.69E-46 |
| MS.gene052164 | MS.gene33500 | 0.889756 | 1.82E-73 | -1.69E-46 |
| MS.gene052271 | MS.gene33500 | 0.85434 | 1.31E-61 | -1.69E-46 |
| MS.gene052379 | MS.gene33500 | 0.806149 | 9.46E-50 | -1.69E-46 |
| MS.gene052482 | MS.gene33500 | 0.881758 | 1.84E-70 | -1.69E-46 |
| MS.gene052486 | MS.gene33500 | 0.89053 | 9.06E-74 | -1.69E-46 |
| MS.gene052503 | MS.gene33500 | 0.871759 | 5.35E-67 | -1.69E-46 |
| MS.gene052504 | MS.gene33500 | 0.808575 | 2.89E-50 | -1.69E-46 |
| MS.gene052506 | MS.gene33500 | 0.833467 | 5.25E-56 | -1.69E-46 |
| MS.gene052615 | MS.gene33500 | 0.849749 | 2.65E-60 | -1.69E-46 |
| MS.gene052670 | MS.gene33500 | 0.802868 | 4.57E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene33500 | 0.849242 | 3.67E-60 | -1.69E-46 |
| MS.gene052823 | MS.gene33500 | 0.871753 | 5.37E-67 | -1.69E-46 |
| MS.gene052825 | MS.gene33500 | 0.865503 | 5.63E-65 | -1.69E-46 |
| MS.gene052872 | MS.gene33500 | 0.808755 | 2.65E-50 | -1.69E-46 |
| MS.gene052916 | MS.gene33500 | 0.841102 | 5.82E-58 | -1.69E-46 |
| MS.gene052937 | MS.gene33500 | -0.817363 | 3.43E-52 | -1.69E-46 |
| MS.gene052966 | MS.gene33500 | 0.87517 | 3.80E-68 | -1.69E-46 |
| MS.gene053203 | MS.gene33500 | 0.890768 | 7.31E-74 | -1.69E-46 |
| MS.gene053207 | MS.gene33500 | 0.853301 | 2.62E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene33500 | 0.917441 | 5.29E-86 | -1.69E-46 |
| MS.gene053286 | MS.gene33500 | 0.925348 | 2.07E-90 | -1.69E-46 |
| MS.gene053420 | MS.gene33500 | -0.845934 | 2.98E-59 | -1.69E-46 |
| MS.gene053436 | MS.gene33500 | 0.863154 | 3.05E-64 | -1.69E-46 |
| MS.gene053479 | MS.gene33500 | 0.834867 | 2.34E-56 | -1.69E-46 |
| MS.gene053480 | MS.gene33500 | 0.853093 | 3.00E-61 | -1.69E-46 |
| MS.gene053549 | MS.gene33500 | -0.837642 | 4.61E-57 | -1.69E-46 |
| MS.gene053561 | MS.gene33500 | -0.823445 | 1.38E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene33500 | 0.872511 | 3.01E-67 | -1.69E-46 |
| MS.gene053626 | MS.gene33500 | 0.815131 | 1.08E-51 | -1.69E-46 |
| MS.gene053632 | MS.gene33500 | 0.867075 | 1.79E-65 | -1.69E-46 |
| MS.gene053633 | MS.gene33500 | 0.82296 | 1.79E-53 | -1.69E-46 |
| MS.gene053824 | MS.gene33500 | 0.854176 | 1.47E-61 | -1.69E-46 |
| MS.gene053916 | MS.gene33500 | 0.82468 | 7.08E-54 | -1.69E-46 |
| MS.gene054003 | MS.gene33500 | 0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene054056 | MS.gene33500 | -0.801394 | 9.19E-49 | -1.69E-46 |
| MS.gene054408 | MS.gene33500 | 0.832063 | 1.17E-55 | -1.69E-46 |
| MS.gene054595 | MS.gene33500 | 0.881092 | 3.20E-70 | -1.69E-46 |
| MS.gene054600 | MS.gene33500 | 0.905926 | 2.56E-80 | -1.69E-46 |
| MS.gene054616 | MS.gene33500 | -0.820459 | 6.78E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene33500 | 0.919078 | 7.05E-87 | -1.69E-46 |
| MS.gene054706 | MS.gene33500 | -0.822598 | 2.17E-53 | -1.69E-46 |
| MS.gene054708 | MS.gene33500 | -0.818465 | 1.93E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene33500 | 0.909778 | 3.91E-82 | -1.69E-46 |
| MS.gene054927 | MS.gene33500 | 0.807541 | 4.81E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene33500 | 0.96064 | 8.71E-119 | -1.69E-46 |
| MS.gene054959 | MS.gene33500 | -0.822764 | 1.99E-53 | -1.69E-46 |
| MS.gene055154 | MS.gene33500 | -0.842484 | 2.51E-58 | -1.69E-46 |
| MS.gene055206 | MS.gene33500 | 0.816471 | 5.44E-52 | -1.69E-46 |
| MS.gene055212 | MS.gene33500 | 0.843595 | 1.27E-58 | -1.69E-46 |
| MS.gene055224 | MS.gene33500 | 0.806406 | 8.35E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene33500 | 0.95997 | 4.95E-118 | -1.69E-46 |
| MS.gene055502 | MS.gene33500 | 0.918233 | 2.01E-86 | -1.69E-46 |
| MS.gene055577 | MS.gene33500 | 0.89757 | 1.24E-76 | -1.69E-46 |
| MS.gene055629 | MS.gene33500 | 0.802993 | 4.31E-49 | -1.69E-46 |
| MS.gene055634 | MS.gene33500 | 0.82203 | 2.95E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene33500 | 0.817488 | 3.21E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene33500 | 0.808623 | 2.83E-50 | -1.69E-46 |
| MS.gene055722 | MS.gene33500 | 0.868299 | 7.24E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene33500 | 0.887829 | 1.01E-72 | -1.69E-46 |
| MS.gene055750 | MS.gene33500 | 0.885271 | 9.39E-72 | -1.69E-46 |
| MS.gene055751 | MS.gene33500 | 0.901136 | 3.63E-78 | -1.69E-46 |
| MS.gene055776 | MS.gene33500 | 0.937174 | 5.31E-98 | -1.69E-46 |
| MS.gene055849 | MS.gene33500 | 0.830252 | 3.26E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene33500 | 0.905944 | 2.51E-80 | -1.69E-46 |
| MS.gene055941 | MS.gene33500 | 0.85145 | 8.81E-61 | -1.69E-46 |
| MS.gene055942 | MS.gene33500 | -0.830748 | 2.47E-55 | -1.69E-46 |
| MS.gene055956 | MS.gene33500 | -0.803549 | 3.31E-49 | -1.69E-46 |
| MS.gene056046 | MS.gene33500 | 0.857628 | 1.43E-62 | -1.69E-46 |
| MS.gene056083 | MS.gene33500 | 0.847727 | 9.63E-60 | -1.69E-46 |
| MS.gene056311 | MS.gene33500 | -0.808893 | 2.48E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene33500 | 0.90001 | 1.12E-77 | -1.69E-46 |
| MS.gene056387 | MS.gene33500 | 0.810429 | 1.16E-50 | -1.69E-46 |
| MS.gene056409 | MS.gene33500 | 0.833824 | 4.27E-56 | -1.69E-46 |
| MS.gene056446 | MS.gene33500 | 0.82309 | 1.67E-53 | -1.69E-46 |
| MS.gene056449 | MS.gene33500 | 0.804977 | 1.67E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene33500 | 0.82396 | 1.05E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene33500 | 0.948167 | 1.61E-106 | -1.69E-46 |
| MS.gene056510 | MS.gene33500 | 0.93248 | 8.00E-95 | -1.69E-46 |
| MS.gene056549 | MS.gene33500 | 0.809037 | 2.31E-50 | -1.69E-46 |
| MS.gene056550 | MS.gene33500 | -0.844928 | 5.58E-59 | -1.69E-46 |
| MS.gene056610 | MS.gene33500 | 0.829176 | 5.96E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene33500 | 0.948257 | 1.35E-106 | -1.69E-46 |
| MS.gene056692 | MS.gene33500 | 0.870377 | 1.53E-66 | -1.69E-46 |
| MS.gene056761 | MS.gene33500 | -0.819765 | 9.78E-53 | -1.69E-46 |
| MS.gene056878 | MS.gene33500 | 0.830452 | 2.91E-55 | -1.69E-46 |
| MS.gene056898 | MS.gene33500 | 0.829795 | 4.22E-55 | -1.69E-46 |
| MS.gene056946 | MS.gene33500 | 0.804762 | 1.85E-49 | -1.69E-46 |
| MS.gene057014 | MS.gene33500 | -0.839637 | 1.41E-57 | -1.69E-46 |
| MS.gene057076 | MS.gene33500 | 0.812624 | 3.86E-51 | -1.69E-46 |
| MS.gene057086 | MS.gene33500 | 0.806834 | 6.79E-50 | -1.69E-46 |
| MS.gene057129 | MS.gene33500 | 0.808589 | 2.88E-50 | -1.69E-46 |
| MS.gene057331 | MS.gene33500 | 0.838788 | 2.34E-57 | -1.69E-46 |
| MS.gene057416 | MS.gene33500 | 0.85253 | 4.35E-61 | -1.69E-46 |
| MS.gene05753 | MS.gene33500 | 0.80867 | 2.76E-50 | -1.69E-46 |
| MS.gene057658 | MS.gene33500 | 0.843585 | 1.28E-58 | -1.69E-46 |
| MS.gene057831 | MS.gene33500 | 0.871887 | 4.85E-67 | -1.69E-46 |
| MS.gene057857 | MS.gene33500 | 0.814602 | 1.42E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene33500 | 0.807658 | 4.54E-50 | -1.69E-46 |
| MS.gene05787 | MS.gene33500 | 0.824439 | 8.07E-54 | -1.69E-46 |
| MS.gene057926 | MS.gene33500 | 0.813926 | 2.00E-51 | -1.69E-46 |
| MS.gene057986 | MS.gene33500 | 0.832746 | 7.93E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene33500 | 0.811165 | 8.03E-51 | -1.69E-46 |
| MS.gene058111 | MS.gene33500 | -0.800664 | 1.30E-48 | -1.69E-46 |
| MS.gene058117 | MS.gene33500 | -0.807893 | 4.05E-50 | -1.69E-46 |
| MS.gene058157 | MS.gene33500 | 0.820026 | 8.52E-53 | -1.69E-46 |
| MS.gene058171 | MS.gene33500 | -0.809393 | 1.93E-50 | -1.69E-46 |
| MS.gene058175 | MS.gene33500 | -0.807465 | 4.99E-50 | -1.69E-46 |
| MS.gene058268 | MS.gene33500 | -0.812913 | 3.34E-51 | -1.69E-46 |
| MS.gene058269 | MS.gene33500 | -0.811836 | 5.73E-51 | -1.69E-46 |
| MS.gene058334 | MS.gene33500 | -0.854519 | 1.17E-61 | -1.69E-46 |
| MS.gene058338 | MS.gene33500 | 0.835873 | 1.30E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene33500 | 0.850835 | 1.31E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene33500 | 0.931034 | 6.85E-94 | -1.69E-46 |
| MS.gene058544 | MS.gene33500 | 0.886884 | 2.32E-72 | -1.69E-46 |
| MS.gene058719 | MS.gene33500 | 0.849726 | 2.69E-60 | -1.69E-46 |
| MS.gene058723 | MS.gene33500 | 0.873778 | 1.13E-67 | -1.69E-46 |
| MS.gene058773 | MS.gene33500 | 0.911379 | 6.50E-83 | -1.69E-46 |
| MS.gene058838 | MS.gene33500 | 0.859684 | 3.49E-63 | -1.69E-46 |
| MS.gene058978 | MS.gene33500 | -0.816641 | 4.98E-52 | -1.69E-46 |
| MS.gene059022 | MS.gene33500 | 0.966701 | 2.84E-126 | -1.69E-46 |
| MS.gene059023 | MS.gene33500 | 0.889246 | 2.87E-73 | -1.69E-46 |
| MS.gene059029 | MS.gene33500 | 0.828461 | 8.88E-55 | -1.69E-46 |
| MS.gene05912 | MS.gene33500 | 0.842183 | 3.02E-58 | -1.69E-46 |
| MS.gene05913 | MS.gene33500 | 0.867036 | 1.84E-65 | -1.69E-46 |
| MS.gene05914 | MS.gene33500 | 0.802394 | 5.73E-49 | -1.69E-46 |
| MS.gene059367 | MS.gene33500 | 0.843902 | 1.05E-58 | -1.69E-46 |
| MS.gene059667 | MS.gene33500 | 0.828529 | 8.55E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene33500 | 0.949261 | 1.82E-107 | -1.69E-46 |
| MS.gene059718 | MS.gene33500 | 0.916961 | 9.47E-86 | -1.69E-46 |
| MS.gene059756 | MS.gene33500 | 0.886294 | 3.88E-72 | -1.69E-46 |
| MS.gene059801 | MS.gene33500 | 0.839908 | 1.20E-57 | -1.69E-46 |
| MS.gene059837 | MS.gene33500 | 0.878236 | 3.31E-69 | -1.69E-46 |
| MS.gene059865 | MS.gene33500 | 0.943508 | 1.06E-102 | -1.69E-46 |
| MS.gene059902 | MS.gene33500 | 0.821518 | 3.87E-53 | -1.69E-46 |
| MS.gene059916 | MS.gene33500 | -0.813961 | 1.96E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene33500 | 0.873452 | 1.45E-67 | -1.69E-46 |
| MS.gene060337 | MS.gene33500 | -0.850939 | 1.23E-60 | -1.69E-46 |
| MS.gene060341 | MS.gene33500 | 0.833761 | 4.43E-56 | -1.69E-46 |
| MS.gene060482 | MS.gene33500 | 0.862767 | 4.01E-64 | -1.69E-46 |
| MS.gene060526 | MS.gene33500 | 0.801522 | 8.66E-49 | -1.69E-46 |
| MS.gene060595 | MS.gene33500 | -0.832554 | 8.85E-56 | -1.69E-46 |
| MS.gene060602 | MS.gene33500 | -0.814131 | 1.80E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene33500 | 0.93918 | 1.96E-99 | -1.69E-46 |
| MS.gene060728 | MS.gene33500 | 0.827469 | 1.54E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene33500 | 0.907693 | 3.85E-81 | -1.69E-46 |
| MS.gene060778 | MS.gene33500 | 0.896725 | 2.80E-76 | -1.69E-46 |
| MS.gene06077 | MS.gene33500 | 0.94064 | 1.65E-100 | -1.69E-46 |
| MS.gene060835 | MS.gene33500 | 0.808614 | 2.84E-50 | -1.69E-46 |
| MS.gene06092 | MS.gene33500 | 0.834837 | 2.38E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene33500 | 0.918483 | 1.47E-86 | -1.69E-46 |
| MS.gene061134 | MS.gene33500 | 0.818964 | 1.49E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene33500 | 0.888808 | 4.25E-73 | -1.69E-46 |
| MS.gene061200 | MS.gene33500 | 0.800058 | 1.72E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33500.t1 | MTR_4g015570 | 99.308 | 289 | 2 | 0 | 1 | 289 | 1 | 289 | 0.0 | 587 |
| MS.gene33500.t1 | MTR_3g070340 | 70.566 | 265 | 74 | 1 | 12 | 272 | 11 | 275 | 8.49e-134 | 380 |
| MS.gene33500.t1 | MTR_6g033320 | 40.000 | 230 | 90 | 5 | 57 | 282 | 49 | 234 | 2.30e-44 | 151 |
| MS.gene33500.t1 | MTR_2g042720 | 34.615 | 260 | 92 | 7 | 53 | 288 | 61 | 266 | 1.44e-38 | 137 |
| MS.gene33500.t1 | MTR_8g023790 | 33.205 | 259 | 95 | 5 | 53 | 287 | 62 | 266 | 9.28e-35 | 127 |
| MS.gene33500.t1 | MTR_3g101670 | 30.795 | 302 | 131 | 5 | 13 | 289 | 17 | 265 | 1.21e-34 | 126 |
| MS.gene33500.t1 | MTR_6g060175 | 33.452 | 281 | 116 | 10 | 35 | 289 | 47 | 282 | 1.82e-34 | 126 |
| MS.gene33500.t1 | MTR_3g435460 | 30.671 | 313 | 132 | 8 | 1 | 289 | 1 | 252 | 2.69e-31 | 117 |
| MS.gene33500.t1 | MTR_6g012110 | 33.446 | 296 | 136 | 10 | 3 | 281 | 2 | 253 | 7.38e-31 | 116 |
| MS.gene33500.t1 | MTR_6g012080 | 32.770 | 296 | 138 | 10 | 3 | 281 | 2 | 253 | 8.46e-31 | 116 |
| MS.gene33500.t1 | MTR_4g094605 | 34.228 | 298 | 132 | 11 | 3 | 281 | 2 | 254 | 2.44e-30 | 115 |
| MS.gene33500.t1 | MTR_6g011870 | 33.670 | 297 | 134 | 11 | 3 | 281 | 2 | 253 | 1.31e-29 | 113 |
| MS.gene33500.t1 | MTR_6g011880 | 33.670 | 297 | 134 | 11 | 3 | 281 | 2 | 253 | 2.02e-29 | 112 |
| MS.gene33500.t1 | MTR_2g081090 | 35.622 | 233 | 92 | 7 | 61 | 278 | 33 | 222 | 3.19e-29 | 111 |
| MS.gene33500.t1 | MTR_2g081090 | 35.622 | 233 | 92 | 7 | 61 | 278 | 60 | 249 | 4.19e-29 | 112 |
| MS.gene33500.t1 | MTR_6g011890 | 32.432 | 296 | 139 | 10 | 3 | 281 | 2 | 253 | 8.26e-29 | 111 |
| MS.gene33500.t1 | MTR_1g026550 | 31.111 | 315 | 139 | 12 | 5 | 288 | 62 | 329 | 1.20e-28 | 112 |
| MS.gene33500.t1 | MTR_2g008610 | 31.818 | 308 | 115 | 9 | 4 | 268 | 2 | 257 | 1.22e-28 | 110 |
| MS.gene33500.t1 | MTR_6g060175 | 31.673 | 281 | 111 | 10 | 35 | 289 | 47 | 272 | 1.33e-28 | 110 |
| MS.gene33500.t1 | MTR_5g097280 | 32.836 | 268 | 109 | 11 | 35 | 278 | 30 | 250 | 2.00e-26 | 104 |
| MS.gene33500.t1 | MTR_5g098785 | 29.710 | 276 | 122 | 7 | 39 | 286 | 43 | 274 | 1.88e-25 | 102 |
| MS.gene33500.t1 | MTR_5g098780 | 30.000 | 280 | 121 | 7 | 35 | 286 | 40 | 272 | 2.68e-25 | 102 |
| MS.gene33500.t1 | MTR_3g435460 | 37.017 | 181 | 75 | 5 | 132 | 289 | 27 | 191 | 2.75e-25 | 100 |
| MS.gene33500.t1 | MTR_6g043600 | 41.830 | 153 | 68 | 6 | 136 | 281 | 79 | 217 | 2.76e-23 | 95.5 |
| MS.gene33500.t1 | MTR_5g098770 | 45.070 | 71 | 39 | 0 | 216 | 286 | 21 | 91 | 2.89e-15 | 70.5 |
| MS.gene33500.t1 | MTR_2g436960 | 50.000 | 72 | 31 | 2 | 216 | 287 | 33 | 99 | 5.90e-13 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33500.t1 | AT3G08940 | 87.004 | 277 | 33 | 2 | 14 | 289 | 13 | 287 | 2.39e-178 | 493 |
| MS.gene33500.t1 | AT5G01530 | 87.726 | 277 | 33 | 1 | 14 | 289 | 14 | 290 | 3.35e-174 | 483 |
| MS.gene33500.t1 | AT2G40100 | 70.189 | 265 | 74 | 2 | 12 | 272 | 10 | 273 | 1.25e-132 | 377 |
| MS.gene33500.t1 | AT3G08940 | 77.326 | 172 | 36 | 2 | 15 | 185 | 14 | 183 | 4.58e-90 | 267 |
| MS.gene33500.t1 | AT2G40100 | 64.024 | 164 | 55 | 1 | 12 | 171 | 10 | 173 | 3.21e-71 | 218 |
| MS.gene33500.t1 | AT3G54890 | 41.453 | 234 | 87 | 6 | 57 | 285 | 48 | 236 | 4.89e-47 | 158 |
| MS.gene33500.t1 | AT1G19150 | 33.846 | 260 | 94 | 6 | 53 | 288 | 64 | 269 | 5.35e-35 | 127 |
| MS.gene33500.t1 | AT4G10340 | 35.573 | 253 | 102 | 8 | 53 | 289 | 66 | 273 | 8.98e-35 | 127 |
| MS.gene33500.t1 | AT3G61470 | 33.977 | 259 | 93 | 6 | 53 | 287 | 51 | 255 | 1.28e-34 | 126 |
| MS.gene33500.t1 | AT1G45474 | 32.830 | 265 | 99 | 5 | 51 | 289 | 43 | 254 | 2.08e-34 | 125 |
| MS.gene33500.t1 | AT1G45474 | 32.830 | 265 | 99 | 5 | 51 | 289 | 43 | 254 | 2.08e-34 | 125 |
| MS.gene33500.t1 | AT2G34420 | 34.333 | 300 | 128 | 11 | 3 | 281 | 2 | 253 | 8.53e-33 | 121 |
| MS.gene33500.t1 | AT1G29930 | 35.099 | 302 | 125 | 13 | 3 | 281 | 2 | 255 | 1.73e-32 | 120 |
| MS.gene33500.t1 | AT1G29920 | 35.099 | 302 | 125 | 13 | 3 | 281 | 2 | 255 | 3.62e-32 | 120 |
| MS.gene33500.t1 | AT1G29910 | 35.099 | 302 | 125 | 13 | 3 | 281 | 2 | 255 | 3.62e-32 | 120 |
| MS.gene33500.t1 | AT1G76570 | 34.304 | 309 | 126 | 12 | 5 | 283 | 61 | 322 | 4.10e-32 | 121 |
| MS.gene33500.t1 | AT3G47470 | 30.645 | 310 | 129 | 8 | 4 | 287 | 2 | 251 | 7.46e-32 | 119 |
| MS.gene33500.t1 | AT3G54890 | 37.629 | 194 | 72 | 5 | 57 | 246 | 48 | 196 | 1.49e-30 | 114 |
| MS.gene33500.t1 | AT5G54270 | 33.696 | 276 | 108 | 8 | 35 | 278 | 18 | 250 | 1.94e-30 | 115 |
| MS.gene33500.t1 | AT2G34430 | 44.785 | 163 | 74 | 6 | 134 | 281 | 93 | 254 | 6.03e-30 | 114 |
| MS.gene33500.t1 | AT1G15820 | 33.704 | 270 | 75 | 9 | 40 | 268 | 48 | 254 | 4.36e-29 | 111 |
| MS.gene33500.t1 | AT1G61520 | 30.435 | 276 | 119 | 7 | 39 | 286 | 40 | 270 | 6.20e-28 | 108 |
| MS.gene33500.t1 | AT1G61520 | 30.435 | 276 | 119 | 7 | 39 | 286 | 40 | 270 | 6.20e-28 | 108 |
| MS.gene33500.t1 | AT2G05070 | 33.108 | 296 | 125 | 13 | 7 | 278 | 4 | 250 | 2.32e-27 | 107 |
| MS.gene33500.t1 | AT2G05100 | 34.363 | 259 | 96 | 11 | 47 | 278 | 39 | 250 | 1.80e-26 | 105 |
| MS.gene33500.t1 | AT3G27690 | 33.110 | 299 | 130 | 13 | 3 | 278 | 32 | 283 | 3.07e-26 | 105 |
| MS.gene33500.t1 | AT3G27690 | 33.220 | 295 | 127 | 13 | 7 | 278 | 4 | 251 | 7.65e-26 | 103 |
| MS.gene33500.t1 | AT1G61520 | 29.388 | 245 | 102 | 6 | 70 | 286 | 14 | 215 | 1.97e-20 | 87.8 |
| MS.gene33500.t1 | AT2G05100 | 32.927 | 246 | 91 | 11 | 47 | 265 | 39 | 237 | 2.36e-19 | 86.7 |
| MS.gene33500.t1 | AT5G28450 | 45.783 | 83 | 44 | 1 | 206 | 287 | 89 | 171 | 6.22e-14 | 68.9 |
Find 84 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATTGAAGTTCTAGTAAT+TGG | 0.183569 | 4.2:+85557702 | MS.gene33500:CDS |
| CTTACTGTTGAGTGGCTTAC+TGG | 0.200165 | 4.2:+85556817 | MS.gene33500:CDS |
| CTTGATCTCGATGGTTTCTT+TGG | 0.211241 | 4.2:-85556255 | None:intergenic |
| GGAAGTTTGGTCGGAGATTA+CGG | 0.284629 | 4.2:+85556562 | MS.gene33500:CDS |
| GGATTTGATCCATTCGGTTT+GGG | 0.286594 | 4.2:+85556583 | MS.gene33500:CDS |
| GGCTGCAGCGGTGGCGGTTG+CGG | 0.291908 | 4.2:-85556139 | None:intergenic |
| ACCTCACTGTAAGGCTGAAA+TGG | 0.350160 | 4.2:-85556721 | None:intergenic |
| CTTGCTATGGTTGCTTTCCT+TGG | 0.358398 | 4.2:+85557867 | MS.gene33500:CDS |
| CGGATTTGATCCATTCGGTT+TGG | 0.362578 | 4.2:+85556582 | MS.gene33500:CDS |
| GTAAAGGACCACTTAACAAT+TGG | 0.364076 | 4.2:+85557916 | MS.gene33500:CDS |
| TTCCAAAGCCAAATCGGGCT+TGG | 0.364220 | 4.2:-85556218 | None:intergenic |
| CACTCCGGTGACTTTGCTCC+GGG | 0.367189 | 4.2:-85556532 | None:intergenic |
| TCTTCTTTCCAAAGCCAAAT+CGG | 0.368050 | 4.2:-85556224 | None:intergenic |
| GGCTTGGATCCTACCCGAAT+TGG | 0.370873 | 4.2:-85556202 | None:intergenic |
| ATCCAAGCCCGATTTGGCTT+TGG | 0.371097 | 4.2:+85556216 | MS.gene33500:CDS |
| CATCAAGTTCTGCATTTCTC+TGG | 0.373438 | 4.2:-85557737 | None:intergenic |
| TTTCAGGTTGAGCTAGTAGA+AGG | 0.373969 | 4.2:+85557630 | MS.gene33500:intron |
| TTTGCTCCGGGGTACCATAA+TGG | 0.383572 | 4.2:-85556520 | None:intergenic |
| GTGAGTTGATTCATGGTAGA+TGG | 0.391291 | 4.2:+85556770 | MS.gene33500:CDS |
| CTTCTTTCCAAAGCCAAATC+GGG | 0.397487 | 4.2:-85556223 | None:intergenic |
| GGTAGGATCCAAGCCCGATT+TGG | 0.398525 | 4.2:+85556210 | MS.gene33500:CDS |
| AGGGAATGTGAGTTGATTCA+TGG | 0.400554 | 4.2:+85556763 | MS.gene33500:CDS |
| AACTTGGCAAAGAATCTTGC+CGG | 0.404071 | 4.2:+85556652 | MS.gene33500:CDS |
| AAAGAAAGCAACACTTCAAT+TGG | 0.404848 | 4.2:+85557824 | MS.gene33500:CDS |
| CCGCGAAGTTCAATCCAATT+CGG | 0.405011 | 4.2:+85556188 | MS.gene33500:CDS |
| TCTCAATCACAACACTAATC+TGG | 0.407508 | 4.2:+85557682 | MS.gene33500:CDS |
| CGCGAAGTTCAATCCAATTC+GGG | 0.412313 | 4.2:+85556189 | MS.gene33500:CDS |
| GCTGTTCAAGCTGCTGCTAC+TGG | 0.427306 | 4.2:+85557894 | MS.gene33500:CDS |
| GTAGAAGGATCAACATATCT+TGG | 0.431470 | 4.2:+85557645 | MS.gene33500:CDS |
| CCACTCCGGTGACTTTGCTC+CGG | 0.432695 | 4.2:-85556533 | None:intergenic |
| TGGGCTATGCTTGCTACTCT+TGG | 0.438475 | 4.2:+85556790 | MS.gene33500:CDS |
| CCGGAGATGTGATCGGAACT+AGG | 0.444206 | 4.2:+85556671 | MS.gene33500:CDS |
| GGAGTGGCTAGACGGAAGTT+TGG | 0.446982 | 4.2:+85556549 | MS.gene33500:CDS |
| CAAGCTGCTGCTACTGGTAA+AGG | 0.448841 | 4.2:+85557900 | MS.gene33500:CDS |
| ATTAGTGTTGTGATTGAGAA+TGG | 0.460015 | 4.2:-85557678 | None:intergenic |
| CAGGTACTGATCGTCCATTA+TGG | 0.471652 | 4.2:+85556506 | MS.gene33500:intron |
| TGGATTGAACTTCGCGGAGG+CGG | 0.476462 | 4.2:-85556182 | None:intergenic |
| CGACTCGCTTGATCAGAACT+TGG | 0.480675 | 4.2:+85556636 | MS.gene33500:CDS |
| TCAAATTGCAAATACTCTGC+TGG | 0.481835 | 4.2:-85556610 | None:intergenic |
| GGAAAATTCTTTGACCCACT+TGG | 0.485517 | 4.2:+85557783 | MS.gene33500:CDS |
| GGAAGAAAAGGTATCAATGA+TGG | 0.486648 | 4.2:-85557970 | None:intergenic |
| TGCAGCGGTGGCGGTTGCGG+CGG | 0.492945 | 4.2:-85556136 | None:intergenic |
| CAAGAACTAAGAGGAAGAAA+AGG | 0.500205 | 4.2:-85557982 | None:intergenic |
| GGATTGAACTTCGCGGAGGC+GGG | 0.511648 | 4.2:-85556181 | None:intergenic |
| CCTAGTTCCGATCACATCTC+CGG | 0.525368 | 4.2:-85556671 | None:intergenic |
| GATTACGGATTTGATCCATT+CGG | 0.525387 | 4.2:+85556577 | MS.gene33500:CDS |
| TAAAGGACCACTTAACAATT+GGG | 0.525889 | 4.2:+85557917 | MS.gene33500:CDS |
| GGTGTTACATGGCAAGATGC+TGG | 0.526008 | 4.2:+85556838 | MS.gene33500:CDS |
| TGAAGTGGCTGCAGCGGTGG+CGG | 0.531682 | 4.2:-85556145 | None:intergenic |
| TGAGTAGCCCAATTGTTAAG+TGG | 0.534802 | 4.2:-85557924 | None:intergenic |
| TGAGTTAATCAAGAACTAAG+AGG | 0.538848 | 4.2:-85557991 | None:intergenic |
| CAAACATGCTCGTCTTGCTA+TGG | 0.544135 | 4.2:+85557854 | MS.gene33500:CDS |
| AGTGGCTTACTGGTGTTACA+TGG | 0.548988 | 4.2:+85556827 | MS.gene33500:CDS |
| CCGAATTGGATTGAACTTCG+CGG | 0.551574 | 4.2:-85556188 | None:intergenic |
| GTTGTGATTGAGAATGGAAG+TGG | 0.559057 | 4.2:-85557672 | None:intergenic |
| TGGCTAGACGGAAGTTTGGT+CGG | 0.562317 | 4.2:+85556553 | MS.gene33500:CDS |
| AGATGTGATCGGAACTAGGA+CGG | 0.563578 | 4.2:+85556675 | MS.gene33500:CDS |
| TTGGTGCTCTTACTGTTGAG+TGG | 0.568394 | 4.2:+85556809 | MS.gene33500:CDS |
| GATTTGATCCATTCGGTTTG+GGG | 0.569199 | 4.2:+85556584 | MS.gene33500:CDS |
| GCTGGTTTCCCCAAACCGAA+TGG | 0.572303 | 4.2:-85556592 | None:intergenic |
| TGATGAAGTGGCTGCAGCGG+TGG | 0.581298 | 4.2:-85556148 | None:intergenic |
| AATCTTGCCGGAGATGTGAT+CGG | 0.597819 | 4.2:+85556664 | MS.gene33500:CDS |
| TGAGTTGATTCATGGTAGAT+GGG | 0.603160 | 4.2:+85556771 | MS.gene33500:CDS |
| TACATGGCAAGATGCTGGAA+AGG | 0.603751 | 4.2:+85556843 | MS.gene33500:CDS |
| AAGTCACCGGAGTGGCTAGA+CGG | 0.609847 | 4.2:+85556541 | MS.gene33500:CDS |
| GCAGCCACTTCATCATTCAT+CGG | 0.611200 | 4.2:+85556156 | MS.gene33500:CDS |
| TCTCGATGGTTTCTTTGGTG+CGG | 0.615685 | 4.2:-85556250 | None:intergenic |
| AAACTTCCGTCTAGCCACTC+CGG | 0.616068 | 4.2:-85556547 | None:intergenic |
| GTACCCCGGAGCAAAGTCAC+CGG | 0.620014 | 4.2:+85556528 | MS.gene33500:CDS |
| TCAATGATGGTAGTGTGAAG+AGG | 0.631393 | 4.2:-85557957 | None:intergenic |
| CAGCTTGAACAGCAAAACCA+AGG | 0.638361 | 4.2:-85557884 | None:intergenic |
| GGGTCAGATGCTAAACCAAG+TGG | 0.639451 | 4.2:-85557798 | None:intergenic |
| TCCATTTCAGCCTTACAGTG+AGG | 0.649605 | 4.2:+85556720 | MS.gene33500:CDS |
| GAATGATGAAGTGGCTGCAG+CGG | 0.651301 | 4.2:-85556151 | None:intergenic |
| AAGTTCAATCCAATTCGGGT+AGG | 0.656773 | 4.2:+85556193 | MS.gene33500:CDS |
| GGTGCCGATGAATGATGAAG+TGG | 0.658626 | 4.2:-85556160 | None:intergenic |
| GTACTGGGACTTGATCTCGA+TGG | 0.663909 | 4.2:-85556264 | None:intergenic |
| GATCGTCCATTATGGTACCC+CGG | 0.673771 | 4.2:+85556514 | MS.gene33500:CDS |
| GGTCAGATGCTAAACCAAGT+GGG | 0.680824 | 4.2:-85557797 | None:intergenic |
| CCGGAGCAAAGTCACCGGAG+TGG | 0.687601 | 4.2:+85556533 | MS.gene33500:CDS |
| ACTCCGGTGACTTTGCTCCG+GGG | 0.699763 | 4.2:-85556531 | None:intergenic |
| AATTGGATTGAACTTCGCGG+AGG | 0.719272 | 4.2:-85556185 | None:intergenic |
| GAAAAGAGACTATACCCAGG+TGG | 0.723166 | 4.2:+85557762 | MS.gene33500:CDS |
| GCAGAAAAGAGACTATACCC+AGG | 0.746677 | 4.2:+85557759 | MS.gene33500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTTTTTA+GGG | + | chr4.2:85557054-85557073 | MS.gene33500:intron | 0.0% |
| !!! | TTTTTTTTTTTTTTTTTTTT+AGG | + | chr4.2:85557051-85557070 | MS.gene33500:intron | 0.0% |
| !!! | GTTTTGTTTTTTTTTTTTTA+TGG | + | chr4.2:85557108-85557127 | MS.gene33500:intron | 10.0% |
| !!! | TTTTTCTTTTTACATTATAT+TGG | + | chr4.2:85557395-85557414 | MS.gene33500:intron | 10.0% |
| !! | AATCTTTAATTATATCTAAC+AGG | + | chr4.2:85556487-85556506 | MS.gene33500:intron | 15.0% |
| !! | AGTTATAATTAGTTAATAGT+TGG | + | chr4.2:85556357-85556376 | MS.gene33500:intron | 15.0% |
| !!! | AAATTTTGGTATAATTTTTC+AGG | + | chr4.2:85557614-85557633 | MS.gene33500:intron | 15.0% |
| !!! | TTCACTAAATTATGAAATTT+TGG | + | chr4.2:85557600-85557619 | MS.gene33500:intron | 15.0% |
| !! | ATTACAAACATTATATCACA+TGG | + | chr4.2:85557303-85557322 | MS.gene33500:intron | 20.0% |
| !! | TTAATTATATCTAACGTACT+GGG | - | chr4.2:85556282-85556301 | None:intergenic | 20.0% |
| !! | TTCCATTATCATATAATATG+AGG | + | chr4.2:85557483-85557502 | MS.gene33500:intron | 20.0% |
| !! | TTTAATTATATCTAACGTAC+TGG | - | chr4.2:85556283-85556302 | None:intergenic | 20.0% |
| !!! | AAATCTTACTACACTATTTT+AGG | - | chr4.2:85557253-85557272 | None:intergenic | 20.0% |
| !!! | AAGTAAGAAAATAGGTTTTA+TGG | + | chr4.2:85557328-85557347 | MS.gene33500:intron | 20.0% |
| !!! | TTTATGTTTGTTTTGTAAAG+AGG | + | chr4.2:85557176-85557195 | MS.gene33500:intron | 20.0% |
| ! | AATCAAAATGCTTCAAGATA+CGG | - | chr4.2:85557368-85557387 | None:intergenic | 25.0% |
| ! | GTCCTCATATTATATGATAA+TGG | - | chr4.2:85557488-85557507 | None:intergenic | 25.0% |
| AAAGAAAGCAACACTTCAAT+TGG | + | chr4.2:85557824-85557843 | MS.gene33500:CDS | 30.0% | |
| ACATGGTCAAGTAAGAAAAT+AGG | + | chr4.2:85557320-85557339 | MS.gene33500:intron | 30.0% | |
| ATTAGTGTTGTGATTGAGAA+TGG | - | chr4.2:85557681-85557700 | None:intergenic | 30.0% | |
| GTAAAGAGGATAAAAGATAG+TGG | + | chr4.2:85557190-85557209 | MS.gene33500:intron | 30.0% | |
| GTCTTTAATTCAAGTGTGTT+TGG | + | chr4.2:85556969-85556988 | MS.gene33500:intron | 30.0% | |
| TAAAGGACCACTTAACAATT+GGG | + | chr4.2:85557917-85557936 | MS.gene33500:CDS | 30.0% | |
| ! | TGGATTGAAGTTCTAGTAAT+TGG | + | chr4.2:85557702-85557721 | MS.gene33500:CDS | 30.0% |
| ! | TTCTAAAAGAGTTTGTAGCA+AGG | - | chr4.2:85557510-85557529 | None:intergenic | 30.0% |
| GATTACGGATTTGATCCATT+CGG | + | chr4.2:85556577-85556596 | MS.gene33500:CDS | 35.0% | |
| GTAAAGGACCACTTAACAAT+TGG | + | chr4.2:85557916-85557935 | MS.gene33500:CDS | 35.0% | |
| GTAGAAGGATCAACATATCT+TGG | + | chr4.2:85557645-85557664 | MS.gene33500:CDS | 35.0% | |
| TAATTCAAGTGTGTTTGGCT+CGG | + | chr4.2:85556974-85556993 | MS.gene33500:intron | 35.0% | |
| TCAAATTGCAAATACTCTGC+TGG | - | chr4.2:85556613-85556632 | None:intergenic | 35.0% | |
| TCTCAATCACAACACTAATC+TGG | + | chr4.2:85557682-85557701 | MS.gene33500:CDS | 35.0% | |
| TCTTCTTTCCAAAGCCAAAT+CGG | - | chr4.2:85556227-85556246 | None:intergenic | 35.0% | |
| ! | TTTTGGACTTCAGAGGTTTA+GGG | + | chr4.2:85556744-85556763 | MS.gene33500:CDS | 35.0% |
| ! | TTTTTGGACTTCAGAGGTTT+AGG | + | chr4.2:85556743-85556762 | MS.gene33500:CDS | 35.0% |
| !! | GGAAGAAAAGGTATCAATGA+TGG | - | chr4.2:85557973-85557992 | None:intergenic | 35.0% |
| !! | TGAGTTGATTCATGGTAGAT+GGG | + | chr4.2:85556771-85556790 | MS.gene33500:CDS | 35.0% |
| !!! | GAAGTGTTGCTTTCTTTTCT+GGG | - | chr4.2:85557821-85557840 | None:intergenic | 35.0% |
| !!! | TGAAGTGTTGCTTTCTTTTC+TGG | - | chr4.2:85557822-85557841 | None:intergenic | 35.0% |
| AACTTGGCAAAGAATCTTGC+CGG | + | chr4.2:85556652-85556671 | MS.gene33500:CDS | 40.0% | |
| AAGTTCAATCCAATTCGGGT+AGG | + | chr4.2:85556193-85556212 | MS.gene33500:CDS | 40.0% | |
| AGTCCAAAAACCTCACTGTA+AGG | - | chr4.2:85556733-85556752 | None:intergenic | 40.0% | |
| CATCAAGTTCTGCATTTCTC+TGG | - | chr4.2:85557740-85557759 | None:intergenic | 40.0% | |
| CTTCTTTCCAAAGCCAAATC+GGG | - | chr4.2:85556226-85556245 | None:intergenic | 40.0% | |
| CTTGATCTCGATGGTTTCTT+TGG | - | chr4.2:85556258-85556277 | None:intergenic | 40.0% | |
| GGAAAATTCTTTGACCCACT+TGG | + | chr4.2:85557783-85557802 | MS.gene33500:CDS | 40.0% | |
| GGATTTGATCCATTCGGTTT+GGG | + | chr4.2:85556583-85556602 | MS.gene33500:CDS | 40.0% | |
| GTTGTGATTGAGAATGGAAG+TGG | - | chr4.2:85557675-85557694 | None:intergenic | 40.0% | |
| TGAGTAGCCCAATTGTTAAG+TGG | - | chr4.2:85557927-85557946 | None:intergenic | 40.0% | |
| ! | AGATGCTGGAAAGGTTTGTT+TGG | + | chr4.2:85556852-85556871 | MS.gene33500:intron | 40.0% |
| ! | GATTTGATCCATTCGGTTTG+GGG | + | chr4.2:85556584-85556603 | MS.gene33500:CDS | 40.0% |
| ! | GGTCAAAGAATTTTCCACCT+GGG | - | chr4.2:85557779-85557798 | None:intergenic | 40.0% |
| ! | TCAATGATGGTAGTGTGAAG+AGG | - | chr4.2:85557960-85557979 | None:intergenic | 40.0% |
| !! | AGGGAATGTGAGTTGATTCA+TGG | + | chr4.2:85556763-85556782 | MS.gene33500:CDS | 40.0% |
| !! | GTGAGTTGATTCATGGTAGA+TGG | + | chr4.2:85556770-85556789 | MS.gene33500:CDS | 40.0% |
| !! | TTTCAGGTTGAGCTAGTAGA+AGG | + | chr4.2:85557630-85557649 | MS.gene33500:intron | 40.0% |
| AATCTTGCCGGAGATGTGAT+CGG | + | chr4.2:85556664-85556683 | MS.gene33500:CDS | 45.0% | |
| AATTGGATTGAACTTCGCGG+AGG | - | chr4.2:85556188-85556207 | None:intergenic | 45.0% | |
| ACCTCACTGTAAGGCTGAAA+TGG | - | chr4.2:85556724-85556743 | None:intergenic | 45.0% | |
| AGATGTGATCGGAACTAGGA+CGG | + | chr4.2:85556675-85556694 | MS.gene33500:CDS | 45.0% | |
| CAAACATGCTCGTCTTGCTA+TGG | + | chr4.2:85557854-85557873 | MS.gene33500:CDS | 45.0% | |
| CAGCTTGAACAGCAAAACCA+AGG | - | chr4.2:85557887-85557906 | None:intergenic | 45.0% | |
| CCGAATTGGATTGAACTTCG+CGG | - | chr4.2:85556191-85556210 | None:intergenic | 45.0% | |
| CCGCGAAGTTCAATCCAATT+CGG | + | chr4.2:85556188-85556207 | MS.gene33500:CDS | 45.0% | |
| CGCGAAGTTCAATCCAATTC+GGG | + | chr4.2:85556189-85556208 | MS.gene33500:CDS | 45.0% | |
| CGGATTTGATCCATTCGGTT+TGG | + | chr4.2:85556582-85556601 | MS.gene33500:CDS | 45.0% | |
| CTTACTGTTGAGTGGCTTAC+TGG | + | chr4.2:85556817-85556836 | MS.gene33500:CDS | 45.0% | |
| GAAAAGAGACTATACCCAGG+TGG | + | chr4.2:85557762-85557781 | MS.gene33500:CDS | 45.0% | |
| GCAGAAAAGAGACTATACCC+AGG | + | chr4.2:85557759-85557778 | MS.gene33500:CDS | 45.0% | |
| GCAGCCACTTCATCATTCAT+CGG | + | chr4.2:85556156-85556175 | MS.gene33500:CDS | 45.0% | |
| GGAAGTTTGGTCGGAGATTA+CGG | + | chr4.2:85556562-85556581 | MS.gene33500:CDS | 45.0% | |
| GGTCAGATGCTAAACCAAGT+GGG | - | chr4.2:85557800-85557819 | None:intergenic | 45.0% | |
| TACATGGCAAGATGCTGGAA+AGG | + | chr4.2:85556843-85556862 | MS.gene33500:CDS | 45.0% | |
| TCCATTTCAGCCTTACAGTG+AGG | + | chr4.2:85556720-85556739 | MS.gene33500:CDS | 45.0% | |
| TCTCGATGGTTTCTTTGGTG+CGG | - | chr4.2:85556253-85556272 | None:intergenic | 45.0% | |
| ! | CAGCCTTACAGTGAGGTTTT+TGG | + | chr4.2:85556727-85556746 | MS.gene33500:CDS | 45.0% |
| ! | CTTGCTATGGTTGCTTTCCT+TGG | + | chr4.2:85557867-85557886 | MS.gene33500:CDS | 45.0% |
| ! | GGGTCAAAGAATTTTCCACC+TGG | - | chr4.2:85557780-85557799 | None:intergenic | 45.0% |
| ! | TTGGTGCTCTTACTGTTGAG+TGG | + | chr4.2:85556809-85556828 | MS.gene33500:CDS | 45.0% |
| !! | AGTGGCTTACTGGTGTTACA+TGG | + | chr4.2:85556827-85556846 | MS.gene33500:CDS | 45.0% |
| !! | CAGGTACTGATCGTCCATTA+TGG | + | chr4.2:85556506-85556525 | MS.gene33500:intron | 45.0% |
| !! | GTGAGGTTTTTGGACTTCAG+AGG | + | chr4.2:85556737-85556756 | MS.gene33500:CDS | 45.0% |
| !! | TTATAACAAAATAATATTAA+AGG | - | chr4.2:85556320-85556339 | None:intergenic | 5.0% |
| AAACTTCCGTCTAGCCACTC+CGG | - | chr4.2:85556550-85556569 | None:intergenic | 50.0% | |
| CAAGCTGCTGCTACTGGTAA+AGG | + | chr4.2:85557900-85557919 | MS.gene33500:CDS | 50.0% | |
| CCTAGTTCCGATCACATCTC+CGG | - | chr4.2:85556674-85556693 | None:intergenic | 50.0% | |
| CGACTCGCTTGATCAGAACT+TGG | + | chr4.2:85556636-85556655 | MS.gene33500:CDS | 50.0% | |
| GAATGATGAAGTGGCTGCAG+CGG | - | chr4.2:85556154-85556173 | None:intergenic | 50.0% | |
| GATCGTCCATTATGGTACCC+CGG | + | chr4.2:85556514-85556533 | MS.gene33500:CDS | 50.0% | |
| GGGTCAGATGCTAAACCAAG+TGG | - | chr4.2:85557801-85557820 | None:intergenic | 50.0% | |
| GTACTGGGACTTGATCTCGA+TGG | - | chr4.2:85556267-85556286 | None:intergenic | 50.0% | |
| TGGCTAGACGGAAGTTTGGT+CGG | + | chr4.2:85556553-85556572 | MS.gene33500:CDS | 50.0% | |
| TTCCAAAGCCAAATCGGGCT+TGG | - | chr4.2:85556221-85556240 | None:intergenic | 50.0% | |
| ! | GGTGTTACATGGCAAGATGC+TGG | + | chr4.2:85556838-85556857 | MS.gene33500:CDS | 50.0% |
| ! | TGGGCTATGCTTGCTACTCT+TGG | + | chr4.2:85556790-85556809 | MS.gene33500:CDS | 50.0% |
| ! | TTTGCTCCGGGGTACCATAA+TGG | - | chr4.2:85556523-85556542 | None:intergenic | 50.0% |
| !! | ATCCAAGCCCGATTTGGCTT+TGG | + | chr4.2:85556216-85556235 | MS.gene33500:CDS | 50.0% |
| !! | GGTGCCGATGAATGATGAAG+TGG | - | chr4.2:85556163-85556182 | None:intergenic | 50.0% |
| AAGTCACCGGAGTGGCTAGA+CGG | + | chr4.2:85556541-85556560 | MS.gene33500:CDS | 55.0% | |
| CCGGAGATGTGATCGGAACT+AGG | + | chr4.2:85556671-85556690 | MS.gene33500:CDS | 55.0% | |
| GCTGTTCAAGCTGCTGCTAC+TGG | + | chr4.2:85557894-85557913 | MS.gene33500:CDS | 55.0% | |
| GGAGTGGCTAGACGGAAGTT+TGG | + | chr4.2:85556549-85556568 | MS.gene33500:CDS | 55.0% | |
| GGCTTGGATCCTACCCGAAT+TGG | - | chr4.2:85556205-85556224 | None:intergenic | 55.0% | |
| GGTAGGATCCAAGCCCGATT+TGG | + | chr4.2:85556210-85556229 | MS.gene33500:CDS | 55.0% | |
| TGGATTGAACTTCGCGGAGG+CGG | - | chr4.2:85556185-85556204 | None:intergenic | 55.0% | |
| ! | GCTGGTTTCCCCAAACCGAA+TGG | - | chr4.2:85556595-85556614 | None:intergenic | 55.0% |
| ACTCCGGTGACTTTGCTCCG+GGG | - | chr4.2:85556534-85556553 | None:intergenic | 60.0% | |
| CACTCCGGTGACTTTGCTCC+GGG | - | chr4.2:85556535-85556554 | None:intergenic | 60.0% | |
| CCACTCCGGTGACTTTGCTC+CGG | - | chr4.2:85556536-85556555 | None:intergenic | 60.0% | |
| GGATTGAACTTCGCGGAGGC+GGG | - | chr4.2:85556184-85556203 | None:intergenic | 60.0% | |
| GTACCCCGGAGCAAAGTCAC+CGG | + | chr4.2:85556528-85556547 | MS.gene33500:CDS | 60.0% | |
| TGATGAAGTGGCTGCAGCGG+TGG | - | chr4.2:85556151-85556170 | None:intergenic | 60.0% | |
| CCGGAGCAAAGTCACCGGAG+TGG | + | chr4.2:85556533-85556552 | MS.gene33500:CDS | 65.0% | |
| TGAAGTGGCTGCAGCGGTGG+CGG | - | chr4.2:85556148-85556167 | None:intergenic | 65.0% | |
| ! | GGCTGCAGCGGTGGCGGTTG+CGG | - | chr4.2:85556142-85556161 | None:intergenic | 75.0% |
| ! | TGCAGCGGTGGCGGTTGCGG+CGG | - | chr4.2:85556139-85556158 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 85556132 | 85557998 | 85556132 | ID=MS.gene33500 |
| chr4.2 | mRNA | 85556132 | 85557998 | 85556132 | ID=MS.gene33500.t1;Parent=MS.gene33500 |
| chr4.2 | exon | 85556132 | 85556282 | 85556132 | ID=MS.gene33500.t1.exon1;Parent=MS.gene33500.t1 |
| chr4.2 | CDS | 85556132 | 85556282 | 85556132 | ID=cds.MS.gene33500.t1;Parent=MS.gene33500.t1 |
| chr4.2 | exon | 85556509 | 85556864 | 85556509 | ID=MS.gene33500.t1.exon2;Parent=MS.gene33500.t1 |
| chr4.2 | CDS | 85556509 | 85556864 | 85556509 | ID=cds.MS.gene33500.t1;Parent=MS.gene33500.t1 |
| chr4.2 | exon | 85557636 | 85557998 | 85557636 | ID=MS.gene33500.t1.exon3;Parent=MS.gene33500.t1 |
| chr4.2 | CDS | 85557636 | 85557998 | 85557636 | ID=cds.MS.gene33500.t1;Parent=MS.gene33500.t1 |
| Gene Sequence |
| Protein sequence |
