Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47833.t1 | RHN58791.1 | 99.2 | 120 | 1 | 0 | 1 | 120 | 228 | 347 | 2.60E-60 | 241.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47833.t1 | Q07473 | 94.2 | 120 | 7 | 0 | 1 | 120 | 171 | 290 | 6.5e-60 | 231.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47833.t1 | B7FIZ5 | 99.2 | 120 | 1 | 0 | 1 | 120 | 170 | 289 | 1.9e-60 | 241.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene47833 | 0.82598 | 3.49E-54 | -1.69E-46 |
| MS.gene049171 | MS.gene47833 | 0.896991 | 2.17E-76 | -1.69E-46 |
| MS.gene049173 | MS.gene47833 | 0.827316 | 1.67E-54 | -1.69E-46 |
| MS.gene049217 | MS.gene47833 | 0.851207 | 1.03E-60 | -1.69E-46 |
| MS.gene049222 | MS.gene47833 | 0.88097 | 3.54E-70 | -1.69E-46 |
| MS.gene049232 | MS.gene47833 | 0.848278 | 6.79E-60 | -1.69E-46 |
| MS.gene049285 | MS.gene47833 | 0.909583 | 4.85E-82 | -1.69E-46 |
| MS.gene049320 | MS.gene47833 | 0.936687 | 1.17E-97 | -1.69E-46 |
| MS.gene049427 | MS.gene47833 | 0.817537 | 3.13E-52 | -1.69E-46 |
| MS.gene049609 | MS.gene47833 | 0.910212 | 2.41E-82 | -1.69E-46 |
| MS.gene049615 | MS.gene47833 | 0.824565 | 7.54E-54 | -1.69E-46 |
| MS.gene049627 | MS.gene47833 | 0.843116 | 1.71E-58 | -1.69E-46 |
| MS.gene049633 | MS.gene47833 | 0.850764 | 1.38E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene47833 | 0.867076 | 1.79E-65 | -1.69E-46 |
| MS.gene05010 | MS.gene47833 | 0.894683 | 1.96E-75 | -1.69E-46 |
| MS.gene050163 | MS.gene47833 | 0.885611 | 7.00E-72 | -1.69E-46 |
| MS.gene050165 | MS.gene47833 | 0.867044 | 1.83E-65 | -1.69E-46 |
| MS.gene050170 | MS.gene47833 | 0.833745 | 4.47E-56 | -1.69E-46 |
| MS.gene050323 | MS.gene47833 | 0.833736 | 4.49E-56 | -1.69E-46 |
| MS.gene050333 | MS.gene47833 | 0.85759 | 1.47E-62 | -1.69E-46 |
| MS.gene050381 | MS.gene47833 | -0.806443 | 8.21E-50 | -1.69E-46 |
| MS.gene050496 | MS.gene47833 | 0.830551 | 2.76E-55 | -1.69E-46 |
| MS.gene050502 | MS.gene47833 | 0.802437 | 5.61E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene47833 | 0.901825 | 1.81E-78 | -1.69E-46 |
| MS.gene050518 | MS.gene47833 | 0.893167 | 8.08E-75 | -1.69E-46 |
| MS.gene050538 | MS.gene47833 | 0.828207 | 1.02E-54 | -1.69E-46 |
| MS.gene050547 | MS.gene47833 | -0.808085 | 3.68E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene47833 | 0.873917 | 1.01E-67 | -1.69E-46 |
| MS.gene050593 | MS.gene47833 | 0.857677 | 1.39E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene47833 | 0.907716 | 3.75E-81 | -1.69E-46 |
| MS.gene050647 | MS.gene47833 | -0.801854 | 7.40E-49 | -1.69E-46 |
| MS.gene050662 | MS.gene47833 | 0.8236 | 1.27E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene47833 | 0.874911 | 4.66E-68 | -1.69E-46 |
| MS.gene050686 | MS.gene47833 | 0.807282 | 5.46E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene47833 | 0.924883 | 3.88E-90 | -1.69E-46 |
| MS.gene050747 | MS.gene47833 | 0.880812 | 4.03E-70 | -1.69E-46 |
| MS.gene050767 | MS.gene47833 | 0.809717 | 1.65E-50 | -1.69E-46 |
| MS.gene050770 | MS.gene47833 | 0.809836 | 1.55E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene47833 | 0.927327 | 1.37E-91 | -1.69E-46 |
| MS.gene05080 | MS.gene47833 | 0.836976 | 6.82E-57 | -1.69E-46 |
| MS.gene050868 | MS.gene47833 | 0.846091 | 2.70E-59 | -1.69E-46 |
| MS.gene050871 | MS.gene47833 | 0.843122 | 1.70E-58 | -1.69E-46 |
| MS.gene050883 | MS.gene47833 | -0.82246 | 2.34E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene47833 | 0.883525 | 4.17E-71 | -1.69E-46 |
| MS.gene050986 | MS.gene47833 | 0.918168 | 2.17E-86 | -1.69E-46 |
| MS.gene05100 | MS.gene47833 | 0.86232 | 5.51E-64 | -1.69E-46 |
| MS.gene05105 | MS.gene47833 | 0.801356 | 9.36E-49 | -1.69E-46 |
| MS.gene051127 | MS.gene47833 | -0.835152 | 1.98E-56 | -1.69E-46 |
| MS.gene051228 | MS.gene47833 | 0.814027 | 1.90E-51 | -1.69E-46 |
| MS.gene051317 | MS.gene47833 | 0.834252 | 3.34E-56 | -1.69E-46 |
| MS.gene051364 | MS.gene47833 | -0.805613 | 1.23E-49 | -1.69E-46 |
| MS.gene051366 | MS.gene47833 | -0.803678 | 3.11E-49 | -1.69E-46 |
| MS.gene051387 | MS.gene47833 | 0.814692 | 1.35E-51 | -1.69E-46 |
| MS.gene051509 | MS.gene47833 | 0.820538 | 6.51E-53 | -1.69E-46 |
| MS.gene051551 | MS.gene47833 | 0.904684 | 9.48E-80 | -1.69E-46 |
| MS.gene051666 | MS.gene47833 | 0.837917 | 3.92E-57 | -1.69E-46 |
| MS.gene051692 | MS.gene47833 | 0.830325 | 3.13E-55 | -1.69E-46 |
| MS.gene051694 | MS.gene47833 | 0.850678 | 1.45E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene47833 | 0.893935 | 3.95E-75 | -1.69E-46 |
| MS.gene051838 | MS.gene47833 | 0.811947 | 5.43E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene47833 | 0.854108 | 1.53E-61 | -1.69E-46 |
| MS.gene052164 | MS.gene47833 | 0.854554 | 1.14E-61 | -1.69E-46 |
| MS.gene052271 | MS.gene47833 | 0.859539 | 3.86E-63 | -1.69E-46 |
| MS.gene052322 | MS.gene47833 | 0.802393 | 5.73E-49 | -1.69E-46 |
| MS.gene052379 | MS.gene47833 | 0.809549 | 1.79E-50 | -1.69E-46 |
| MS.gene052421 | MS.gene47833 | 0.815994 | 6.95E-52 | -1.69E-46 |
| MS.gene052481 | MS.gene47833 | 0.816061 | 6.71E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene47833 | 0.830819 | 2.37E-55 | -1.69E-46 |
| MS.gene052484 | MS.gene47833 | 0.808811 | 2.58E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene47833 | 0.838 | 3.73E-57 | -1.69E-46 |
| MS.gene052501 | MS.gene47833 | 0.823807 | 1.14E-53 | -1.69E-46 |
| MS.gene052503 | MS.gene47833 | 0.855163 | 7.59E-62 | -1.69E-46 |
| MS.gene052504 | MS.gene47833 | 0.835096 | 2.05E-56 | -1.69E-46 |
| MS.gene052505 | MS.gene47833 | 0.812594 | 3.92E-51 | -1.69E-46 |
| MS.gene052506 | MS.gene47833 | 0.855309 | 6.88E-62 | -1.69E-46 |
| MS.gene052615 | MS.gene47833 | 0.892949 | 9.90E-75 | -1.69E-46 |
| MS.gene052670 | MS.gene47833 | 0.813739 | 2.20E-51 | -1.69E-46 |
| MS.gene052820 | MS.gene47833 | 0.808828 | 2.56E-50 | -1.69E-46 |
| MS.gene052822 | MS.gene47833 | 0.86356 | 2.28E-64 | -1.69E-46 |
| MS.gene052823 | MS.gene47833 | 0.850743 | 1.39E-60 | -1.69E-46 |
| MS.gene052825 | MS.gene47833 | 0.847129 | 1.41E-59 | -1.69E-46 |
| MS.gene052916 | MS.gene47833 | 0.863184 | 2.98E-64 | -1.69E-46 |
| MS.gene052966 | MS.gene47833 | 0.850523 | 1.61E-60 | -1.69E-46 |
| MS.gene052982 | MS.gene47833 | 0.826381 | 2.80E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene47833 | 0.849027 | 4.21E-60 | -1.69E-46 |
| MS.gene053018 | MS.gene47833 | 0.802181 | 6.34E-49 | -1.69E-46 |
| MS.gene053104 | MS.gene47833 | 0.823105 | 1.66E-53 | -1.69E-46 |
| MS.gene053203 | MS.gene47833 | 0.894321 | 2.75E-75 | -1.69E-46 |
| MS.gene053207 | MS.gene47833 | 0.89733 | 1.56E-76 | -1.69E-46 |
| MS.gene053213 | MS.gene47833 | 0.939867 | 6.16E-100 | -1.69E-46 |
| MS.gene053286 | MS.gene47833 | 0.93553 | 7.34E-97 | -1.69E-46 |
| MS.gene053322 | MS.gene47833 | 0.840489 | 8.43E-58 | -1.69E-46 |
| MS.gene053420 | MS.gene47833 | -0.812105 | 5.01E-51 | -1.69E-46 |
| MS.gene053436 | MS.gene47833 | 0.889419 | 2.46E-73 | -1.69E-46 |
| MS.gene053479 | MS.gene47833 | 0.820532 | 6.53E-53 | -1.69E-46 |
| MS.gene053480 | MS.gene47833 | 0.819004 | 1.46E-52 | -1.69E-46 |
| MS.gene053549 | MS.gene47833 | -0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene47833 | -0.81188 | 5.61E-51 | -1.69E-46 |
| MS.gene053574 | MS.gene47833 | 0.905191 | 5.57E-80 | -1.69E-46 |
| MS.gene053626 | MS.gene47833 | 0.835841 | 1.33E-56 | -1.69E-46 |
| MS.gene053632 | MS.gene47833 | 0.859384 | 4.29E-63 | -1.69E-46 |
| MS.gene053824 | MS.gene47833 | 0.841101 | 5.83E-58 | -1.69E-46 |
| MS.gene053916 | MS.gene47833 | 0.832934 | 7.12E-56 | -1.69E-46 |
| MS.gene054376 | MS.gene47833 | 0.800595 | 1.34E-48 | -1.69E-46 |
| MS.gene054408 | MS.gene47833 | 0.869757 | 2.44E-66 | -1.69E-46 |
| MS.gene054595 | MS.gene47833 | 0.856502 | 3.08E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene47833 | 0.898365 | 5.70E-77 | -1.69E-46 |
| MS.gene054642 | MS.gene47833 | 0.91787 | 3.13E-86 | -1.69E-46 |
| MS.gene054708 | MS.gene47833 | -0.803502 | 3.38E-49 | -1.69E-46 |
| MS.gene05470 | MS.gene47833 | 0.865503 | 5.63E-65 | -1.69E-46 |
| MS.gene054927 | MS.gene47833 | 0.853594 | 2.16E-61 | -1.69E-46 |
| MS.gene054954 | MS.gene47833 | 0.9012 | 3.41E-78 | -1.69E-46 |
| MS.gene05505 | MS.gene47833 | 0.834036 | 3.78E-56 | -1.69E-46 |
| MS.gene055139 | MS.gene47833 | -0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene055154 | MS.gene47833 | -0.848585 | 5.58E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene47833 | 0.853629 | 2.11E-61 | -1.69E-46 |
| MS.gene055212 | MS.gene47833 | 0.824943 | 6.14E-54 | -1.69E-46 |
| MS.gene055224 | MS.gene47833 | 0.817809 | 2.72E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene47833 | 0.863135 | 3.09E-64 | -1.69E-46 |
| MS.gene055362 | MS.gene47833 | 0.943718 | 7.25E-103 | -1.69E-46 |
| MS.gene055397 | MS.gene47833 | 0.808789 | 2.61E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene47833 | 0.848572 | 5.63E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene47833 | 0.886513 | 3.20E-72 | -1.69E-46 |
| MS.gene055577 | MS.gene47833 | 0.875059 | 4.15E-68 | -1.69E-46 |
| MS.gene055629 | MS.gene47833 | 0.816183 | 6.31E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene47833 | 0.801657 | 8.12E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene47833 | 0.854901 | 9.04E-62 | -1.69E-46 |
| MS.gene055722 | MS.gene47833 | 0.911436 | 6.09E-83 | -1.69E-46 |
| MS.gene055748 | MS.gene47833 | 0.830807 | 2.38E-55 | -1.69E-46 |
| MS.gene055750 | MS.gene47833 | 0.827927 | 1.19E-54 | -1.69E-46 |
| MS.gene055751 | MS.gene47833 | 0.826622 | 2.45E-54 | -1.69E-46 |
| MS.gene055776 | MS.gene47833 | 0.851541 | 8.30E-61 | -1.69E-46 |
| MS.gene05589 | MS.gene47833 | 0.842266 | 2.87E-58 | -1.69E-46 |
| MS.gene05592 | MS.gene47833 | 0.854128 | 1.51E-61 | -1.69E-46 |
| MS.gene055941 | MS.gene47833 | 0.826901 | 2.10E-54 | -1.69E-46 |
| MS.gene055956 | MS.gene47833 | -0.816561 | 5.19E-52 | -1.69E-46 |
| MS.gene056040 | MS.gene47833 | 0.810234 | 1.28E-50 | -1.69E-46 |
| MS.gene056083 | MS.gene47833 | 0.882984 | 6.58E-71 | -1.69E-46 |
| MS.gene056374 | MS.gene47833 | 0.928344 | 3.30E-92 | -1.69E-46 |
| MS.gene056409 | MS.gene47833 | 0.817854 | 2.66E-52 | -1.69E-46 |
| MS.gene056448 | MS.gene47833 | 0.815563 | 8.67E-52 | -1.69E-46 |
| MS.gene056487 | MS.gene47833 | 0.804215 | 2.40E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene47833 | 0.879849 | 8.90E-70 | -1.69E-46 |
| MS.gene056510 | MS.gene47833 | 0.880206 | 6.64E-70 | -1.69E-46 |
| MS.gene056549 | MS.gene47833 | 0.802447 | 5.59E-49 | -1.69E-46 |
| MS.gene056550 | MS.gene47833 | -0.8284 | 9.18E-55 | -1.69E-46 |
| MS.gene056610 | MS.gene47833 | 0.843532 | 1.32E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene47833 | 0.913594 | 5.13E-84 | -1.69E-46 |
| MS.gene05666 | MS.gene47833 | 0.808397 | 3.16E-50 | -1.69E-46 |
| MS.gene056692 | MS.gene47833 | 0.857566 | 1.50E-62 | -1.69E-46 |
| MS.gene056878 | MS.gene47833 | 0.828729 | 7.65E-55 | -1.69E-46 |
| MS.gene056946 | MS.gene47833 | 0.805063 | 1.60E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene47833 | 0.813099 | 3.04E-51 | -1.69E-46 |
| MS.gene057076 | MS.gene47833 | 0.820837 | 5.55E-53 | -1.69E-46 |
| MS.gene057086 | MS.gene47833 | 0.821305 | 4.33E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene47833 | 0.86384 | 1.87E-64 | -1.69E-46 |
| MS.gene057196 | MS.gene47833 | 0.831035 | 2.10E-55 | -1.69E-46 |
| MS.gene057331 | MS.gene47833 | 0.909161 | 7.73E-82 | -1.69E-46 |
| MS.gene057416 | MS.gene47833 | 0.914915 | 1.09E-84 | -1.69E-46 |
| MS.gene057658 | MS.gene47833 | 0.831187 | 1.92E-55 | -1.69E-46 |
| MS.gene057734 | MS.gene47833 | 0.805837 | 1.10E-49 | -1.69E-46 |
| MS.gene057831 | MS.gene47833 | 0.852377 | 4.80E-61 | -1.69E-46 |
| MS.gene058006 | MS.gene47833 | 0.81415 | 1.78E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene47833 | 0.831866 | 1.31E-55 | -1.69E-46 |
| MS.gene058130 | MS.gene47833 | 0.843481 | 1.36E-58 | -1.69E-46 |
| MS.gene058323 | MS.gene47833 | 0.856117 | 3.99E-62 | -1.69E-46 |
| MS.gene058334 | MS.gene47833 | -0.802847 | 4.62E-49 | -1.69E-46 |
| MS.gene058338 | MS.gene47833 | 0.826024 | 3.40E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene47833 | 0.858359 | 8.69E-63 | -1.69E-46 |
| MS.gene058419 | MS.gene47833 | 0.919358 | 4.97E-87 | -1.69E-46 |
| MS.gene058544 | MS.gene47833 | 0.903723 | 2.58E-79 | -1.69E-46 |
| MS.gene058723 | MS.gene47833 | 0.884806 | 1.40E-71 | -1.69E-46 |
| MS.gene058773 | MS.gene47833 | 0.901414 | 2.75E-78 | -1.69E-46 |
| MS.gene058838 | MS.gene47833 | 0.868934 | 4.51E-66 | -1.69E-46 |
| MS.gene05883 | MS.gene47833 | 0.872373 | 3.34E-67 | -1.69E-46 |
| MS.gene059022 | MS.gene47833 | 0.937251 | 4.70E-98 | -1.69E-46 |
| MS.gene059023 | MS.gene47833 | 0.866855 | 2.10E-65 | -1.69E-46 |
| MS.gene059029 | MS.gene47833 | 0.833911 | 4.06E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene47833 | 0.813922 | 2.00E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene47833 | 0.813011 | 3.18E-51 | -1.69E-46 |
| MS.gene059367 | MS.gene47833 | 0.816095 | 6.60E-52 | -1.69E-46 |
| MS.gene059536 | MS.gene47833 | 0.837437 | 5.20E-57 | -1.69E-46 |
| MS.gene059667 | MS.gene47833 | 0.821891 | 3.17E-53 | -1.69E-46 |
| MS.gene059677 | MS.gene47833 | 0.912631 | 1.56E-83 | -1.69E-46 |
| MS.gene059718 | MS.gene47833 | 0.912465 | 1.89E-83 | -1.69E-46 |
| MS.gene059756 | MS.gene47833 | 0.863137 | 3.09E-64 | -1.69E-46 |
| MS.gene059801 | MS.gene47833 | 0.825477 | 4.59E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene47833 | 0.813447 | 2.55E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene47833 | 0.895547 | 8.64E-76 | -1.69E-46 |
| MS.gene059902 | MS.gene47833 | 0.856823 | 2.48E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene47833 | 0.820902 | 5.37E-53 | -1.69E-46 |
| MS.gene06000 | MS.gene47833 | 0.810344 | 1.21E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene47833 | 0.880352 | 5.89E-70 | -1.69E-46 |
| MS.gene060703 | MS.gene47833 | 0.830624 | 2.64E-55 | -1.69E-46 |
| MS.gene060728 | MS.gene47833 | 0.810875 | 9.27E-51 | -1.69E-46 |
| MS.gene060762 | MS.gene47833 | 0.880835 | 3.96E-70 | -1.69E-46 |
| MS.gene060778 | MS.gene47833 | 0.826503 | 2.62E-54 | -1.69E-46 |
| MS.gene06077 | MS.gene47833 | 0.905792 | 2.95E-80 | -1.69E-46 |
| MS.gene060804 | MS.gene47833 | 0.825902 | 3.64E-54 | -1.69E-46 |
| MS.gene060818 | MS.gene47833 | 0.801147 | 1.03E-48 | -1.69E-46 |
| MS.gene060835 | MS.gene47833 | 0.84409 | 9.38E-59 | -1.69E-46 |
| MS.gene060837 | MS.gene47833 | 0.815797 | 7.69E-52 | -1.69E-46 |
| MS.gene06092 | MS.gene47833 | 0.887895 | 9.55E-73 | -1.69E-46 |
| MS.gene060982 | MS.gene47833 | 0.864127 | 1.52E-64 | -1.69E-46 |
| MS.gene061134 | MS.gene47833 | 0.842099 | 3.18E-58 | -1.69E-46 |
| MS.gene061150 | MS.gene47833 | 0.900266 | 8.70E-78 | -1.69E-46 |
| MS.gene061171 | MS.gene47833 | 0.828393 | 9.22E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene47833 | 0.843322 | 1.50E-58 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47833.t1 | MTR_4g015570 | 99.167 | 120 | 1 | 0 | 1 | 120 | 170 | 289 | 6.57e-83 | 244 |
| MS.gene47833.t1 | MTR_3g070340 | 82.524 | 103 | 18 | 0 | 1 | 103 | 173 | 275 | 2.66e-54 | 171 |
| MS.gene47833.t1 | MTR_6g033320 | 49.541 | 109 | 52 | 3 | 7 | 113 | 127 | 234 | 2.97e-29 | 106 |
| MS.gene47833.t1 | MTR_6g060175 | 43.802 | 121 | 64 | 3 | 3 | 120 | 153 | 272 | 5.00e-25 | 95.9 |
| MS.gene47833.t1 | MTR_6g060175 | 43.802 | 121 | 64 | 3 | 3 | 120 | 163 | 282 | 6.57e-25 | 95.9 |
| MS.gene47833.t1 | MTR_2g081090 | 44.545 | 110 | 55 | 3 | 6 | 109 | 113 | 222 | 1.02e-21 | 86.3 |
| MS.gene47833.t1 | MTR_6g012110 | 45.133 | 113 | 55 | 4 | 6 | 112 | 142 | 253 | 1.80e-21 | 86.3 |
| MS.gene47833.t1 | MTR_6g012080 | 45.133 | 113 | 55 | 4 | 6 | 112 | 142 | 253 | 1.94e-21 | 86.3 |
| MS.gene47833.t1 | MTR_6g011880 | 45.133 | 113 | 55 | 4 | 6 | 112 | 142 | 253 | 2.34e-21 | 85.9 |
| MS.gene47833.t1 | MTR_2g081090 | 44.545 | 110 | 55 | 3 | 6 | 109 | 140 | 249 | 2.35e-21 | 85.9 |
| MS.gene47833.t1 | MTR_6g011890 | 45.133 | 113 | 55 | 4 | 6 | 112 | 142 | 253 | 2.39e-21 | 85.9 |
| MS.gene47833.t1 | MTR_6g011870 | 45.133 | 113 | 55 | 4 | 6 | 112 | 142 | 253 | 2.42e-21 | 85.9 |
| MS.gene47833.t1 | MTR_6g043600 | 46.018 | 113 | 54 | 4 | 6 | 112 | 106 | 217 | 3.53e-21 | 84.7 |
| MS.gene47833.t1 | MTR_4g094605 | 46.018 | 113 | 54 | 4 | 6 | 112 | 143 | 254 | 4.46e-21 | 85.1 |
| MS.gene47833.t1 | MTR_1g026550 | 52.055 | 73 | 35 | 0 | 47 | 119 | 257 | 329 | 1.31e-20 | 85.1 |
| MS.gene47833.t1 | MTR_3g101670 | 40.000 | 120 | 53 | 1 | 20 | 120 | 146 | 265 | 3.15e-20 | 83.2 |
| MS.gene47833.t1 | MTR_5g097280 | 43.363 | 113 | 51 | 5 | 6 | 109 | 142 | 250 | 7.89e-19 | 79.3 |
| MS.gene47833.t1 | MTR_2g042720 | 37.815 | 119 | 56 | 3 | 19 | 119 | 148 | 266 | 8.36e-19 | 79.3 |
| MS.gene47833.t1 | MTR_3g435460 | 38.843 | 121 | 52 | 3 | 17 | 120 | 76 | 191 | 8.73e-18 | 75.1 |
| MS.gene47833.t1 | MTR_8g023790 | 38.983 | 118 | 54 | 2 | 19 | 118 | 149 | 266 | 1.37e-17 | 75.9 |
| MS.gene47833.t1 | MTR_3g435460 | 38.843 | 121 | 52 | 3 | 17 | 120 | 137 | 252 | 2.68e-17 | 75.1 |
| MS.gene47833.t1 | MTR_5g098770 | 44.444 | 72 | 40 | 0 | 47 | 118 | 21 | 92 | 4.54e-17 | 70.9 |
| MS.gene47833.t1 | MTR_5g098785 | 36.207 | 116 | 55 | 2 | 20 | 116 | 158 | 273 | 2.05e-16 | 73.2 |
| MS.gene47833.t1 | MTR_5g098780 | 36.207 | 116 | 55 | 2 | 20 | 116 | 156 | 271 | 2.68e-16 | 72.8 |
| MS.gene47833.t1 | MTR_2g436960 | 50.000 | 72 | 31 | 2 | 47 | 118 | 33 | 99 | 3.92e-14 | 63.5 |
| MS.gene47833.t1 | MTR_2g008610 | 37.607 | 117 | 40 | 4 | 15 | 99 | 142 | 257 | 2.16e-12 | 62.0 |
| MS.gene47833.t1 | MTR_0003s0060 | 44.118 | 68 | 34 | 1 | 53 | 120 | 31 | 94 | 2.23e-11 | 56.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47833.t1 | AT3G08940 | 94.167 | 120 | 7 | 0 | 1 | 120 | 168 | 287 | 6.87e-79 | 234 |
| MS.gene47833.t1 | AT5G01530 | 94.167 | 120 | 7 | 0 | 1 | 120 | 171 | 290 | 1.09e-78 | 233 |
| MS.gene47833.t1 | AT2G40100 | 80.583 | 103 | 19 | 1 | 1 | 103 | 172 | 273 | 2.84e-52 | 166 |
| MS.gene47833.t1 | AT3G54890 | 52.252 | 111 | 50 | 3 | 7 | 115 | 126 | 235 | 2.97e-32 | 114 |
| MS.gene47833.t1 | AT4G10340 | 44.628 | 121 | 63 | 3 | 3 | 120 | 154 | 273 | 2.38e-24 | 94.4 |
| MS.gene47833.t1 | AT1G29920 | 47.368 | 114 | 52 | 5 | 6 | 112 | 143 | 255 | 4.99e-23 | 90.5 |
| MS.gene47833.t1 | AT1G29910 | 47.368 | 114 | 52 | 5 | 6 | 112 | 143 | 255 | 4.99e-23 | 90.5 |
| MS.gene47833.t1 | AT1G29930 | 47.368 | 114 | 52 | 5 | 6 | 112 | 143 | 255 | 4.99e-23 | 90.5 |
| MS.gene47833.t1 | AT2G34430 | 47.368 | 114 | 52 | 4 | 6 | 112 | 142 | 254 | 6.46e-23 | 90.1 |
| MS.gene47833.t1 | AT2G34420 | 47.368 | 114 | 52 | 4 | 6 | 112 | 141 | 253 | 6.91e-23 | 90.1 |
| MS.gene47833.t1 | AT5G54270 | 46.364 | 110 | 53 | 2 | 6 | 109 | 141 | 250 | 1.22e-22 | 89.4 |
| MS.gene47833.t1 | AT1G76570 | 58.824 | 68 | 28 | 0 | 47 | 114 | 255 | 322 | 5.30e-21 | 85.9 |
| MS.gene47833.t1 | AT1G45474 | 39.516 | 124 | 55 | 1 | 17 | 120 | 131 | 254 | 9.36e-21 | 84.3 |
| MS.gene47833.t1 | AT1G45474 | 39.516 | 124 | 55 | 1 | 17 | 120 | 131 | 254 | 9.36e-21 | 84.3 |
| MS.gene47833.t1 | AT2G05070 | 44.248 | 113 | 50 | 5 | 6 | 109 | 142 | 250 | 4.66e-19 | 80.1 |
| MS.gene47833.t1 | AT2G05100 | 44.248 | 113 | 50 | 5 | 6 | 109 | 142 | 250 | 4.85e-19 | 80.1 |
| MS.gene47833.t1 | AT3G27690 | 43.363 | 113 | 51 | 5 | 6 | 109 | 175 | 283 | 2.05e-18 | 78.6 |
| MS.gene47833.t1 | AT3G27690 | 43.363 | 113 | 51 | 5 | 6 | 109 | 143 | 251 | 2.53e-18 | 78.2 |
| MS.gene47833.t1 | AT3G61470 | 38.983 | 118 | 54 | 2 | 19 | 118 | 138 | 255 | 3.12e-17 | 75.1 |
| MS.gene47833.t1 | AT3G47470 | 38.655 | 119 | 51 | 3 | 17 | 118 | 138 | 251 | 3.26e-17 | 74.7 |
| MS.gene47833.t1 | AT1G61520 | 35.345 | 116 | 56 | 2 | 20 | 116 | 99 | 214 | 5.81e-17 | 73.6 |
| MS.gene47833.t1 | AT1G61520 | 35.345 | 116 | 56 | 2 | 20 | 116 | 154 | 269 | 1.18e-16 | 73.6 |
| MS.gene47833.t1 | AT1G61520 | 35.345 | 116 | 56 | 2 | 20 | 116 | 154 | 269 | 1.18e-16 | 73.6 |
| MS.gene47833.t1 | AT5G28450 | 45.783 | 83 | 44 | 1 | 37 | 118 | 89 | 171 | 1.04e-15 | 69.3 |
| MS.gene47833.t1 | AT3G54890 | 47.222 | 72 | 36 | 2 | 7 | 77 | 126 | 196 | 1.31e-15 | 70.1 |
| MS.gene47833.t1 | AT1G19150 | 36.134 | 119 | 58 | 3 | 19 | 119 | 151 | 269 | 2.86e-15 | 70.1 |
| MS.gene47833.t1 | AT1G15820 | 37.607 | 117 | 40 | 4 | 15 | 99 | 139 | 254 | 1.58e-12 | 62.4 |
| MS.gene47833.t1 | AT2G05100 | 42.000 | 100 | 45 | 5 | 6 | 96 | 142 | 237 | 4.40e-12 | 61.6 |
Find 25 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGATCGAAGTTCTAGTAAT+TGG | 0.298063 | 4.4:+84920791 | MS.gene47833:CDS |
| TCTCTATCACAACACTTATC+TGG | 0.311866 | 4.4:+84920771 | MS.gene47833:CDS |
| CTTGCTATGGTTGCTTTCCT+TGG | 0.358398 | 4.4:+84920956 | MS.gene47833:CDS |
| GTAAAGGACCACTTAACAAT+TGG | 0.364076 | 4.4:+84921005 | MS.gene47833:CDS |
| TTTCAGGTTGAGCTAGTAGA+AGG | 0.373969 | 4.4:+84920719 | None:intergenic |
| AAAGAAAGCAACACTTCAAT+TGG | 0.404848 | 4.4:+84920913 | MS.gene47833:CDS |
| CATCAAGCTCAGCATTTCTC+TGG | 0.414677 | 4.4:-84920826 | None:intergenic |
| GCTGTTCAAGCTGCTGCTAC+TGG | 0.427306 | 4.4:+84920983 | MS.gene47833:CDS |
| GTAGAAGGATCAACATATCT+TGG | 0.431470 | 4.4:+84920734 | MS.gene47833:CDS |
| CAAGCTGCTGCTACTGGTAA+AGG | 0.448841 | 4.4:+84920989 | MS.gene47833:CDS |
| GGAAAATTCTTTGACCCACT+TGG | 0.458494 | 4.4:+84920872 | MS.gene47833:CDS |
| ATAAGTGTTGTGATAGAGAA+TGG | 0.479242 | 4.4:-84920767 | None:intergenic |
| GGAAGAAAAGGTATCAATGA+TGG | 0.486648 | 4.4:-84921059 | None:intergenic |
| CAAGAACTAAGAGGAAGAAA+AGG | 0.500205 | 4.4:-84921071 | None:intergenic |
| TAAAGGACCACTTAACAATT+GGG | 0.525889 | 4.4:+84921006 | MS.gene47833:CDS |
| TGAGTAGCCCAATTGTTAAG+TGG | 0.534802 | 4.4:-84921013 | None:intergenic |
| TGAGTTAATCAAGAACTAAG+AGG | 0.538848 | 4.4:-84921080 | None:intergenic |
| CAAACATGCTCGTCTTGCTA+TGG | 0.544135 | 4.4:+84920943 | MS.gene47833:CDS |
| GTTGTGATAGAGAATGGAAG+TGG | 0.611749 | 4.4:-84920761 | None:intergenic |
| TCAATGATGGTAGTGTGAAG+AGG | 0.631393 | 4.4:-84921046 | None:intergenic |
| GGTCAGATGCTAAGCCAAGT+GGG | 0.631916 | 4.4:-84920886 | None:intergenic |
| GGGTCAGATGCTAAGCCAAG+TGG | 0.635931 | 4.4:-84920887 | None:intergenic |
| CAGCTTGAACAGCAAAACCA+AGG | 0.638361 | 4.4:-84920973 | None:intergenic |
| GAAAAGAGACTATACCCAGG+TGG | 0.723166 | 4.4:+84920851 | MS.gene47833:CDS |
| GCAGAAAAGAGACTATACCC+AGG | 0.746677 | 4.4:+84920848 | MS.gene47833:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAAGAAAGCAACACTTCAAT+TGG | + | chr4.4:84920913-84920932 | MS.gene47833:CDS | 30.0% | |
| TAAAGGACCACTTAACAATT+GGG | + | chr4.4:84921006-84921025 | MS.gene47833:CDS | 30.0% | |
| ! | ATAAGTGTTGTGATAGAGAA+TGG | - | chr4.4:84920770-84920789 | None:intergenic | 30.0% |
| GTAAAGGACCACTTAACAAT+TGG | + | chr4.4:84921005-84921024 | MS.gene47833:CDS | 35.0% | |
| GTAGAAGGATCAACATATCT+TGG | + | chr4.4:84920734-84920753 | MS.gene47833:CDS | 35.0% | |
| TCTCTATCACAACACTTATC+TGG | + | chr4.4:84920771-84920790 | MS.gene47833:CDS | 35.0% | |
| ! | TGATACCTTTTCTTCCTCTT+AGG | + | chr4.4:84921066-84921085 | MS.gene47833:CDS | 35.0% |
| ! | TGGATCGAAGTTCTAGTAAT+TGG | + | chr4.4:84920791-84920810 | MS.gene47833:CDS | 35.0% |
| !! | GGAAGAAAAGGTATCAATGA+TGG | - | chr4.4:84921062-84921081 | None:intergenic | 35.0% |
| !!! | GAAGTGTTGCTTTCTTTTCT+GGG | - | chr4.4:84920910-84920929 | None:intergenic | 35.0% |
| !!! | TGAAGTGTTGCTTTCTTTTC+TGG | - | chr4.4:84920911-84920930 | None:intergenic | 35.0% |
| GGAAAATTCTTTGACCCACT+TGG | + | chr4.4:84920872-84920891 | MS.gene47833:CDS | 40.0% | |
| GTTGTGATAGAGAATGGAAG+TGG | - | chr4.4:84920764-84920783 | None:intergenic | 40.0% | |
| TGAGTAGCCCAATTGTTAAG+TGG | - | chr4.4:84921016-84921035 | None:intergenic | 40.0% | |
| ! | GGTCAAAGAATTTTCCACCT+GGG | - | chr4.4:84920868-84920887 | None:intergenic | 40.0% |
| ! | TCAATGATGGTAGTGTGAAG+AGG | - | chr4.4:84921049-84921068 | None:intergenic | 40.0% |
| CAAACATGCTCGTCTTGCTA+TGG | + | chr4.4:84920943-84920962 | MS.gene47833:CDS | 45.0% | |
| CAGCTTGAACAGCAAAACCA+AGG | - | chr4.4:84920976-84920995 | None:intergenic | 45.0% | |
| CATCAAGCTCAGCATTTCTC+TGG | - | chr4.4:84920829-84920848 | None:intergenic | 45.0% | |
| GAAAAGAGACTATACCCAGG+TGG | + | chr4.4:84920851-84920870 | MS.gene47833:CDS | 45.0% | |
| GCAGAAAAGAGACTATACCC+AGG | + | chr4.4:84920848-84920867 | MS.gene47833:CDS | 45.0% | |
| ! | CTTGCTATGGTTGCTTTCCT+TGG | + | chr4.4:84920956-84920975 | MS.gene47833:CDS | 45.0% |
| ! | GGGTCAAAGAATTTTCCACC+TGG | - | chr4.4:84920869-84920888 | None:intergenic | 45.0% |
| CAAGCTGCTGCTACTGGTAA+AGG | + | chr4.4:84920989-84921008 | MS.gene47833:CDS | 50.0% | |
| GGTCAGATGCTAAGCCAAGT+GGG | - | chr4.4:84920889-84920908 | None:intergenic | 50.0% | |
| GCTGTTCAAGCTGCTGCTAC+TGG | + | chr4.4:84920983-84921002 | MS.gene47833:CDS | 55.0% | |
| GGGTCAGATGCTAAGCCAAG+TGG | - | chr4.4:84920890-84920909 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 84920725 | 84921087 | 84920725 | ID=MS.gene47833 |
| chr4.4 | mRNA | 84920725 | 84921087 | 84920725 | ID=MS.gene47833.t1;Parent=MS.gene47833 |
| chr4.4 | exon | 84920725 | 84921087 | 84920725 | ID=MS.gene47833.t1.exon1;Parent=MS.gene47833.t1 |
| chr4.4 | CDS | 84920725 | 84921087 | 84920725 | ID=cds.MS.gene47833.t1;Parent=MS.gene47833.t1 |
| Gene Sequence |
| Protein sequence |
