AlfalfaGEDB | Msa0091440

M. sativa cultivar zhongmu-4 / Msa0091440

KEGG: -
GO: GO:0000154 GO:0000455 GO:0000470 GO:0000488 GO:0000489 GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006139 GO:0006364 GO:0006396 GO:0006412 GO:0006518 GO:0006725 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009451 GO:0009501 GO:0009507 GO:0009536 GO:0009657 GO:0009982 GO:0009987 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0016853 GO:0016866 GO:0019538 GO:0022613 GO:0030490 GO:0031118 GO:0032544 GO:0034470 GO:0034641 GO:0034645 GO:0034660 GO:0042254 GO:0042273 GO:0042274 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043603 GO:0043604 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0071840 GO:0090304 GO:1901360 GO:1901564 GO:1901566 GO:1901576
PFAM: PF01479.28

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091440	XP_024641004.1	95.263	190	9	0	1	190	1	190	8.48e-113	342

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091440	sp\|Q8L960\|SVR1_ARATH	47.500	160	67	4	39	190	47	197	8.44e-30	120

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091440	I3SRW6	95.263	190	9	0	1	190	1	190	5.22e-113	342

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001460	Msa0091440	0.805136	1.544494e-49	-8.615850e-47
Msa0001540	Msa0091440	0.834937	2.244940e-56	-8.615850e-47
Msa0009800	Msa0091440	0.833764	4.420271e-56	-8.615850e-47
Msa0009890	Msa0091440	0.823638	1.243624e-53	-8.615850e-47
Msa0018870	Msa0091440	0.838062	3.594730e-57	-8.615850e-47
Msa0034320	Msa0091440	0.806336	8.643931e-50	-8.615850e-47
Msa0037820	Msa0091440	0.800414	1.457602e-48	-8.615850e-47
Msa0043680	Msa0091440	0.811651	6.293707e-51	-8.615850e-47
Msa0046360	Msa0091440	0.823680	1.215828e-53	-8.615850e-47
Msa0049990	Msa0091440	0.804962	1.679356e-49	-8.615850e-47
Msa0059590	Msa0091440	0.832565	8.789532e-56	-8.615850e-47
Msa0062750	Msa0091440	0.801822	7.511618e-49	-8.615850e-47
Msa0073350	Msa0091440	0.815857	7.457620e-52	-8.615850e-47
Msa0076550	Msa0091440	0.805515	1.286352e-49	-8.615850e-47
Msa0084680	Msa0091440	0.800929	1.144576e-48	-8.615850e-47
Msa0091440	Msa0092660	0.817332	3.483410e-52	-8.615850e-47
Msa0091440	Msa0092680	0.822002	2.989505e-53	-8.615850e-47
Msa0091440	Msa0092730	0.814590	1.425538e-51	-8.615850e-47
Msa0091440	Msa0094700	0.829223	5.805422e-55	-8.615850e-47
Msa0091440	Msa0104190	0.804850	1.772436e-49	-8.615850e-47
Msa0091440	Msa0107460	0.843426	1.411222e-58	-8.615850e-47
Msa0091440	Msa0112290	0.814366	1.597964e-51	-8.615850e-47
Msa0091440	Msa0112340	0.814725	1.330877e-51	-8.615850e-47
Msa0091440	Msa0130800	0.812732	3.655309e-51	-8.615850e-47
Msa0091440	Msa0131390	0.823404	1.410860e-53	-8.615850e-47
Msa0091440	Msa0137600	0.817311	3.522274e-52	-8.615850e-47
Msa0091440	Msa0142000	0.815204	1.042231e-51	-8.615850e-47
Msa0091440	Msa0157020	0.807794	4.247325e-50	-8.615850e-47
Msa0091440	Msa0157350	0.813721	2.218097e-51	-8.615850e-47
Msa0091440	Msa0163300	0.823334	1.465139e-53	-8.615850e-47
Msa0091440	Msa0173610	0.812985	3.218822e-51	-8.615850e-47
Msa0091440	Msa0173760	0.811379	7.211384e-51	-8.615850e-47
Msa0091440	Msa0173850	0.802646	5.083483e-49	-8.615850e-47
Msa0091440	Msa0175280	0.821235	4.497402e-53	-8.615850e-47
Msa0091440	Msa0176710	0.874746	5.306462e-68	-8.615850e-47
Msa0091440	Msa0177490	0.820669	6.069043e-53	-8.615850e-47
Msa0091440	Msa0185550	0.844409	7.694632e-59	-8.615850e-47
Msa0091440	Msa0190840	0.805445	1.330105e-49	-8.615850e-47
Msa0091440	Msa0192020	0.814776	1.296473e-51	-8.615850e-47
Msa0091440	Msa0192710	0.809709	1.654436e-50	-8.615850e-47
Msa0091440	Msa0197900	0.812696	3.723893e-51	-8.615850e-47
Msa0091440	Msa0206940	0.811019	8.632569e-51	-8.615850e-47
Msa0091440	Msa0206970	0.822998	1.754507e-53	-8.615850e-47
Msa0091440	Msa0214730	0.812782	3.565495e-51	-8.615850e-47
Msa0091440	Msa0224960	0.805825	1.107430e-49	-8.615850e-47
Msa0091440	Msa0236350	0.809072	2.266826e-50	-8.615850e-47
Msa0091440	Msa0273550	0.810513	1.110732e-50	-8.615850e-47
Msa0091440	Msa0274870	0.801164	1.024700e-48	-8.615850e-47
Msa0091440	Msa0280140	0.836257	1.040414e-56	-8.615850e-47
Msa0091440	Msa0280500	0.815369	9.576598e-52	-8.615850e-47
Msa0091440	Msa0288220	0.806547	7.799939e-50	-8.615850e-47
Msa0091440	Msa0290600	0.802710	4.930451e-49	-8.615850e-47
Msa0091440	Msa0296000	0.803990	2.677527e-49	-8.615850e-47
Msa0091440	Msa0308430	0.842975	1.861854e-58	-8.615850e-47
Msa0091440	Msa0333900	0.820133	8.058468e-53	-8.615850e-47
Msa0091440	Msa0334020	0.824975	6.032082e-54	-8.615850e-47
Msa0091440	Msa0335740	0.803458	3.452889e-49	-8.615850e-47
Msa0091440	Msa0340440	0.807025	6.182638e-50	-8.615850e-47
Msa0091440	Msa0342620	0.803061	4.173048e-49	-8.615850e-47
Msa0091440	Msa0362840	0.800576	1.350627e-48	-8.615850e-47
Msa0091440	Msa0380360	0.821059	4.937526e-53	-8.615850e-47
Msa0091440	Msa0380420	0.825802	3.842548e-54	-8.615850e-47
Msa0091440	Msa0380440	0.833110	6.438704e-56	-8.615850e-47
Msa0091440	Msa0382500	0.803822	2.901767e-49	-8.615850e-47
Msa0091440	Msa0419030	0.807483	4.944723e-50	-8.615850e-47
Msa0091440	Msa0420800	0.804375	2.226249e-49	-8.615850e-47
Msa0091440	Msa0421100	0.811345	7.335013e-51	-8.615850e-47
Msa0091440	Msa0426480	0.822919	1.830459e-53	-8.615850e-47
Msa0091440	Msa0432680	0.800397	1.468853e-48	-8.615850e-47
Msa0091440	Msa0434630	0.817486	3.216660e-52	-8.615850e-47
Msa0091440	Msa0455200	0.830156	3.441343e-55	-8.615850e-47
Msa0091440	Msa0467080	0.820041	8.456739e-53	-8.615850e-47
Msa0091440	Msa0469270	0.809495	1.839963e-50	-8.615850e-47
Msa0091440	Msa0476150	0.849279	3.581738e-60	-8.615850e-47
Msa0091440	Msa0476180	0.826481	2.649503e-54	-8.615850e-47
Msa0091440	Msa0510540	0.802757	4.820375e-49	-8.615850e-47
Msa0091440	Msa0524510	0.810808	9.586917e-51	-8.615850e-47
Msa0091440	Msa0528740	0.814000	1.925264e-51	-8.615850e-47
Msa0091440	Msa0528870	0.804429	2.169134e-49	-8.615850e-47
Msa0091440	Msa0548710	0.840600	7.888470e-58	-8.615850e-47
Msa0091440	Msa0554170	0.820803	5.653903e-53	-8.615850e-47
Msa0091440	Msa0567290	0.800978	1.118100e-48	-8.615850e-47
Msa0091440	Msa0579610	0.830409	2.984596e-55	-8.615850e-47
Msa0091440	Msa0580360	0.814418	1.556506e-51	-8.615850e-47
Msa0091440	Msa0606140	0.830929	2.225805e-55	-8.615850e-47
Msa0091440	Msa0607300	0.816003	6.916032e-52	-8.615850e-47
Msa0091440	Msa0623270	0.804200	2.421587e-49	-8.615850e-47
Msa0091440	Msa0637850	0.823301	1.491175e-53	-8.615850e-47
Msa0091440	Msa0645040	0.813491	2.491960e-51	-8.615850e-47
Msa0091440	Msa0645780	0.812089	5.052055e-51	-8.615850e-47
Msa0091440	Msa0650360	0.812444	4.226162e-51	-8.615850e-47
Msa0091440	Msa0684520	0.834121	3.599561e-56	-8.615850e-47
Msa0091440	Msa0687540	0.807164	5.778585e-50	-8.615850e-47
Msa0091440	Msa0691100	0.810976	8.818933e-51	-8.615850e-47
Msa0091440	Msa0703760	0.802490	5.472469e-49	-8.615850e-47
Msa0091440	Msa0709480	0.803333	3.664515e-49	-8.615850e-47
Msa0091440	Msa0742170	0.802639	5.098712e-49	-8.615850e-47
Msa0091440	Msa0743100	0.816678	4.884975e-52	-8.615850e-47
Msa0091440	Msa0755570	0.810248	1.266915e-50	-8.615850e-47
Msa0091440	Msa0780750	0.800307	1.532647e-48	-8.615850e-47
Msa0091440	Msa0786050	0.811740	6.018041e-51	-8.615850e-47
Msa0091440	Msa0790180	0.811535	6.669112e-51	-8.615850e-47
Msa0091440	Msa0790830	0.802666	5.035052e-49	-8.615850e-47
Msa0091440	Msa0795850	0.816310	5.908289e-52	-8.615850e-47
Msa0091440	Msa0814760	0.810202	1.295759e-50	-8.615850e-47
Msa0091440	Msa0824140	0.807794	4.246965e-50	-8.615850e-47
Msa0091440	Msa0835030	0.816080	6.648068e-52	-8.615850e-47
Msa0091440	Msa0863250	0.800268	1.560765e-48	-8.615850e-47
Msa0091440	Msa0901140	0.822870	1.879335e-53	-8.615850e-47
Msa0091440	Msa0931730	0.819454	1.151581e-52	-8.615850e-47
Msa0091440	Msa0946650	0.801500	8.745313e-49	-8.615850e-47
Msa0091440	Msa0966410	0.810354	1.201661e-50	-8.615850e-47
Msa0091440	Msa1002980	0.813063	3.094394e-51	-8.615850e-47
Msa0091440	Msa1009790	0.803110	4.076307e-49	-8.615850e-47
Msa0091440	Msa1011240	0.808243	3.408772e-50	-8.615850e-47
Msa0091440	Msa1013510	0.814311	1.643668e-51	-8.615850e-47
Msa0091440	Msa1028460	0.812423	4.271930e-51	-8.615850e-47
Msa0091440	Msa1032970	0.817484	3.220435e-52	-8.615850e-47
Msa0091440	Msa1034460	0.825977	3.491802e-54	-8.615850e-47
Msa0091440	Msa1040390	0.845014	5.288091e-59	-8.615850e-47
Msa0091440	Msa1058980	0.804558	2.039382e-49	-8.615850e-47
Msa0091440	Msa1072080	0.803569	3.274943e-49	-8.615850e-47
Msa0091440	Msa1080620	0.804094	2.547805e-49	-8.615850e-47
Msa0091440	Msa1080690	0.803442	3.478509e-49	-8.615850e-47
Msa0091440	Msa1083140	0.835981	1.222495e-56	-8.615850e-47
Msa0091440	Msa1084490	0.816879	4.404651e-52	-8.615850e-47
Msa0091440	Msa1117690	0.800230	1.588643e-48	-8.615850e-47
Msa0091440	Msa1118390	0.820771	5.752778e-53	-8.615850e-47
Msa0091440	Msa1126310	0.810144	1.333808e-50	-8.615850e-47
Msa0091440	Msa1127900	0.826559	2.538327e-54	-8.615850e-47
Msa0091440	Msa1132820	0.833659	4.697689e-56	-8.615850e-47
Msa0091440	Msa1145370	0.820282	7.448261e-53	-8.615850e-47
Msa0091440	Msa1151120	0.806525	7.885453e-50	-8.615850e-47
Msa0091440	Msa1156210	0.819487	1.131626e-52	-8.615850e-47
Msa0091440	Msa1165810	0.831005	2.132806e-55	-8.615850e-47
Msa0091440	Msa1166180	0.814303	1.650000e-51	-8.615850e-47
Msa0091440	Msa1166280	0.816224	6.174651e-52	-8.615850e-47
Msa0091440	Msa1167160	0.804060	2.589319e-49	-8.615850e-47
Msa0091440	Msa1183610	0.803288	3.744605e-49	-8.615850e-47
Msa0091440	Msa1206440	0.800148	1.650939e-48	-8.615850e-47
Msa0091440	Msa1207280	0.804954	1.685270e-49	-8.615850e-47
Msa0091440	Msa1222580	0.804132	2.501808e-49	-8.615850e-47
Msa0091440	Msa1229050	0.816897	4.364253e-52	-8.615850e-47
Msa0091440	Msa1238710	0.805137	1.543533e-49	-8.615850e-47
Msa0091440	Msa1243860	0.810038	1.406224e-50	-8.615850e-47
Msa0091440	Msa1258940	0.833348	5.617063e-56	-8.615850e-47
Msa0091440	Msa1259470	0.838248	3.218663e-57	-8.615850e-47
Msa0091440	Msa1268250	0.820094	8.223235e-53	-8.615850e-47
Msa0091440	Msa1271490	0.816092	6.608833e-52	-8.615850e-47
Msa0091440	Msa1302750	0.807871	4.089719e-50	-8.615850e-47
Msa0091440	Msa1305650	0.824253	8.921803e-54	-8.615850e-47
Msa0091440	Msa1325980	0.805294	1.430777e-49	-8.615850e-47
Msa0091440	Msa1367600	0.819127	1.367180e-52	-8.615850e-47
Msa0091440	Msa1368730	0.801392	9.201266e-49	-8.615850e-47
Msa0091440	Msa1374810	0.808184	3.508278e-50	-8.615850e-47
Msa0091440	Msa1375600	0.837229	5.878443e-57	-8.615850e-47
Msa0091440	Msa1375630	0.826423	2.735086e-54	-8.615850e-47
Msa0091440	Msa1376530	0.826976	2.018365e-54	-8.615850e-47
Msa0091440	Msa1376560	0.815118	1.088895e-51	-8.615850e-47
Msa0091440	Msa1376590	0.821846	3.249107e-53	-8.615850e-47
Msa0091440	Msa1376640	0.815891	7.326006e-52	-8.615850e-47
Msa0091440	Msa1404370	0.816967	4.207985e-52	-8.615850e-47
Msa0091440	Msa1406880	0.803674	3.113965e-49	-8.615850e-47
Msa0091440	Msa1410170	0.816998	4.140443e-52	-8.615850e-47
Msa0091440	Msa1416460	0.808458	3.066693e-50	-8.615850e-47
Msa0091440	Msa1418600	0.831912	1.275595e-55	-8.615850e-47
Msa0091440	Msa1422490	0.805277	1.442672e-49	-8.615850e-47
Msa0091440	Msa1435910	0.801054	1.079163e-48	-8.615850e-47
Msa0091440	Msa1437320	0.838292	3.135577e-57	-8.615850e-47
Msa0091440	Msa1449680	0.803270	3.776216e-49	-8.615850e-47
Msa0091440	Msa1451840	0.801780	7.661157e-49	-8.615850e-47
Msa0091440	Msa1455120	0.806261	8.962566e-50	-8.615850e-47
Msa0091440	Msa1456830	0.802079	6.651088e-49	-8.615850e-47
Msa0091440	Msa1458330	0.802940	4.418867e-49	-8.615850e-47
Msa0091440	Msa1460650	0.821684	3.542374e-53	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091440	MtrunA17_Chr1g0199231	95.263	190	9	0	1	190	1	190	1.01e-116	342

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0091440	AT2G39140.2	47.500	160	67	4	39	190	47	197	5.67e-31	120
Msa0091440	AT2G39140.1	47.500	160	67	4	39	190	47	197	8.58e-31	120

Find 85 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGAGAAAGAGATGTTGAATT+TGG	0.164387	1_2:+73561661	None:intergenic
TGAGGAGCGGGCTTGGGTTT+GGG	0.169817	1_2:+73561629	None:intergenic
TGAAGAAAAGAGAGCATTTA+AGG	0.186134	1_2:-73560093	Msa0091440:CDS
CTGAGGAGCGGGCTTGGGTT+TGG	0.226899	1_2:+73561628	None:intergenic
AGCCATTTCTTTGAGAAAAC+TGG	0.228183	1_2:+73561499	None:intergenic
GAGGAGCGGGCTTGGGTTTG+GGG	0.258163	1_2:+73561630	None:intergenic
TTTGGGCTGAGGAGCGGGCT+TGG	0.259088	1_2:+73561622	None:intergenic
GGGCTTGGGTTTGGGGTTAG+AGG	0.261689	1_2:+73561637	None:intergenic
AGAAGTAAGTTTGGTTGATT+TGG	0.262141	1_2:+73561724	None:intergenic
CGCTGTCACCGCACGAATCT+TGG	0.269583	1_2:+73561403	None:intergenic
CCATTTCTTCTTCGAATTGC+AGG	0.271506	1_2:+73561792	None:intergenic
GAATTGCAGGGAATTAAAAC+TGG	0.314576	1_2:+73561805	None:intergenic
ATTCTATAATGAAAATATTA+AGG	0.324555	1_2:-73561351	Msa0091440:CDS
TTGGGCTGAGGAGCGGGCTT+GGG	0.325629	1_2:+73561623	None:intergenic
AAAGGCAAGGTTACTGTTAA+CGG	0.361362	1_2:-73560766	Msa0091440:CDS
ATGGGTTCCCTCTCAGGAAT+AGG	0.362298	1_2:+73561901	None:intergenic
TGGGTTCCCTCTCAGGAATA+GGG	0.368952	1_2:+73561902	None:intergenic
ATTCGCCGAAGCTGTAATAT+TGG	0.373491	1_2:-73560180	Msa0091440:CDS
CCTTCGTCATCGTCGTTGTC+GGG	0.377057	1_2:+73561590	None:intergenic
GAAAGAGATGTTGAATTTGG+AGG	0.384878	1_2:+73561664	None:intergenic
CCTGCAATTCGAAGAAGAAA+TGG	0.389883	1_2:-73561792	Msa0091440:exon
GTATGTATGGGTTCCCTCTC+AGG	0.395622	1_2:+73561895	None:intergenic
ATTGTTAAAACAGTAGCTTT+TGG	0.396695	1_2:+73560023	Msa0091430:three_prime_UTR
GATGTTGAATTTGGAGGAGG+AGG	0.399583	1_2:+73561670	None:intergenic
GCGGAAGGTAGAAGTAAGTT+TGG	0.404517	1_2:+73561715	None:intergenic
AGAGAGCATTTAAGGGCAAA+AGG	0.422161	1_2:-73560085	Msa0091440:CDS
TACCCGGAGAATAGTATGTA+TGG	0.426015	1_2:+73561882	None:intergenic
ATCCGTTGGCTTTGCATACC+CGG	0.429354	1_2:+73561866	None:intergenic
ACCTTCGTCATCGTCGTTGT+CGG	0.439627	1_2:+73561589	None:intergenic
CGAAATATCACCTCCGGATG+CGG	0.442888	1_2:+73561295	None:intergenic
TTCGTTTCTATCTTATCCGT+TGG	0.450620	1_2:+73561852	None:intergenic
AGAGATGTTGAATTTGGAGG+AGG	0.451931	1_2:+73561667	None:intergenic
GAAGAAAAGAGAGCATTTAA+GGG	0.456488	1_2:-73560092	Msa0091440:CDS
TTCTGCTTTCAGTTGCATCT+AGG	0.459577	1_2:-73560813	Msa0091440:intron
AGTAAGGTTCTCGCCGCATC+CGG	0.460530	1_2:-73561308	Msa0091440:CDS
AGTAAGTTTGGTTGATTTGG+TGG	0.464128	1_2:+73561727	None:intergenic
AACCTTACTGAGACGAGTAC+CGG	0.477937	1_2:+73561322	None:intergenic
TATAACCAATATTACAGCTT+CGG	0.478200	1_2:+73560175	Msa0091430:three_prime_UTR
CTGCAATTCGAAGAAGAAAT+GGG	0.483274	1_2:-73561791	Msa0091440:exon
TTCTGTCTGTAATACACCTC+AGG	0.490860	1_2:-73560743	Msa0091440:intron
CATTTCTTCTTCGAATTGCA+GGG	0.491259	1_2:+73561793	None:intergenic
GGCTTGGGTTTGGGGTTAGA+GGG	0.491345	1_2:+73561638	None:intergenic
ACTTCAAGAGCATTAAGTAT+AGG	0.496085	1_2:-73560245	Msa0091440:CDS
AACCCATACATACTATTCTC+CGG	0.501645	1_2:-73561885	Msa0091440:five_prime_UTR
GCCATTTCTTTGAGAAAACT+GGG	0.508967	1_2:+73561500	None:intergenic
CTCCGGTACTCGTCTCAGTA+AGG	0.519428	1_2:-73561324	Msa0091440:CDS
AGGAGGAACAAGTGAAGCGA+GGG	0.521264	1_2:+73561687	None:intergenic
TGGATTGTTCGCGGCGAAGA+TGG	0.524610	1_2:-73561551	Msa0091440:CDS
GAGAGCATTTAAGGGCAAAA+GGG	0.530105	1_2:-73560084	Msa0091440:CDS
CTTCGTCATCGTCGTTGTCG+GGG	0.537366	1_2:+73561591	None:intergenic
GAAATGGCTAATGCTCAAAC+CGG	0.538638	1_2:-73561485	Msa0091440:CDS
TCTTTGAGAAAACTGGGAGG+AGG	0.540003	1_2:+73561506	None:intergenic
ACCCATACATACTATTCTCC+GGG	0.545153	1_2:-73561884	Msa0091440:five_prime_UTR
TCAAGAGCATTAAGTATAGG+AGG	0.545897	1_2:-73560242	Msa0091440:CDS
ATGATTCCGTGGATTGTTCG+CGG	0.552805	1_2:-73561560	Msa0091440:CDS
AATGGGTTCAGCGGCAACAA+TGG	0.557684	1_2:-73561774	Msa0091440:CDS
ATAAGTGATGCATTCAATGC+AGG	0.557821	1_2:+73560275	Msa0091430:three_prime_UTR
AAGTTTGGTTGATTTGGTGG+TGG	0.574133	1_2:+73561730	None:intergenic
AAGTGAAGCGAGGGAGAGTG+CGG	0.574272	1_2:+73561696	None:intergenic
CAGATAGCAGAGATGGTAAG+TGG	0.578216	1_2:+73560300	Msa0091430:three_prime_UTR
GAAGCGAGGGAGAGTGCGGA+AGG	0.583385	1_2:+73561700	None:intergenic
GGGTTCCCTCTCAGGAATAG+GGG	0.584648	1_2:+73561903	None:intergenic
TCTTCGCCGCGAACAATCCA+CGG	0.589732	1_2:+73561554	None:intergenic
GCAGGAACAGATAGCAGAGA+TGG	0.591946	1_2:+73560293	Msa0091430:three_prime_UTR
GAAAATATTAAGGAGGACTC+CGG	0.592371	1_2:-73561341	Msa0091440:CDS
TTCGTCATCGTCGTTGTCGG+GGG	0.596006	1_2:+73561592	None:intergenic
GAACACCCCTATTCCTGAGA+GGG	0.597463	1_2:-73561908	Msa0091440:five_prime_UTR
ACCCGGAGAATAGTATGTAT+GGG	0.599191	1_2:+73561883	None:intergenic
GAGGAGGAACAAGTGAAGCG+AGG	0.603213	1_2:+73561686	None:intergenic
TTAAGGGCAAAAGGGCAACC+CGG	0.610503	1_2:-73560076	Msa0091440:CDS
AATTGCAGGGAATTAAAACT+GGG	0.610948	1_2:+73561806	None:intergenic
AAGGTTCTCGCCGCATCCGG+AGG	0.618082	1_2:-73561305	Msa0091440:intron
CGAAGAAGAAATGGGTTCAG+CGG	0.621259	1_2:-73561783	Msa0091440:exon
GCCGCCGCAGTATTCTAAAG+CGG	0.627655	1_2:-73561381	Msa0091440:CDS
CGCAGTATTCTAAAGCGGCT+AGG	0.629068	1_2:-73561376	Msa0091440:CDS
AAGGTCCTCTCATGATTCCG+TGG	0.641693	1_2:-73561571	Msa0091440:CDS
CTCCGGGTATGCAAAGCCAA+CGG	0.645072	1_2:-73561868	Msa0091440:five_prime_UTR
ACAATCCACGGAATCATGAG+AGG	0.656084	1_2:+73561566	None:intergenic
GCCGCTTTAGAATACTGCGG+CGG	0.665649	1_2:+73561380	None:intergenic
CTATAATGAAAATATTAAGG+AGG	0.665956	1_2:-73561348	Msa0091440:CDS
TGAACACCCCTATTCCTGAG+AGG	0.679831	1_2:-73561909	Msa0091440:five_prime_UTR
CCCGACAACGACGATGACGA+AGG	0.693659	1_2:-73561590	Msa0091440:CDS
AAAGGAAACCAAGATTCGTG+CGG	0.715044	1_2:-73561411	Msa0091440:CDS
ATTTCTTTGAGAAAACTGGG+AGG	0.747999	1_2:+73561503	None:intergenic
CTAGCCGCTTTAGAATACTG+CGG	0.799546	1_2:+73561377	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTCTATAATGAAAATATTA+AGG	-	chr1_2:73560567-73560586	Msa0091440:intron	10.0%
!!	CAAAATTGTTTAATAATATT+AGG	-	chr1_2:73560831-73560850	Msa0091440:intron	10.0%
!!!	TTTCTGTTTTTTTTTTTTTT+TGG	+	chr1_2:73560961-73560980	None:intergenic	10.0%
!!	ATTCTATAATGAAAATATTA+AGG	-	chr1_2:73560567-73560586	Msa0091440:intron	10.0%
!!	CAAAATTGTTTAATAATATT+AGG	-	chr1_2:73560831-73560850	Msa0091440:intron	10.0%
!!!	TTTCTGTTTTTTTTTTTTTT+TGG	+	chr1_2:73560961-73560980	None:intergenic	10.0%
!!	AATTCTAATTAATATCTAAC+GGG	+	chr1_2:73561313-73561332	None:intergenic	15.0%
!!	CAATTCTAATTAATATCTAA+CGG	+	chr1_2:73561314-73561333	None:intergenic	15.0%
!!	ATAGATAAAAAAACATTCTA+AGG	-	chr1_2:73561916-73561935	Msa0091440:five_prime_UTR	15.0%
!!	AATTCTAATTAATATCTAAC+GGG	+	chr1_2:73561313-73561332	None:intergenic	15.0%
!!	CAATTCTAATTAATATCTAA+CGG	+	chr1_2:73561314-73561333	None:intergenic	15.0%
!!	CTATAATGAAAATATTAAGG+AGG	-	chr1_2:73560570-73560589	Msa0091440:intron	20.0%
!!	CGTTAGATATTAATTAGAAT+TGG	-	chr1_2:73561312-73561331	Msa0091440:CDS	20.0%
!!	CTATAATGAAAATATTAAGG+AGG	-	chr1_2:73560570-73560589	Msa0091440:intron	20.0%
!!	CGTTAGATATTAATTAGAAT+TGG	-	chr1_2:73561312-73561331	Msa0091440:CDS	20.0%
!!!	TTTTCTTGTTTTTGGTAAGT+TGG	+	chr1_2:73560480-73560499	None:intergenic	25.0%
!!!	TTCACTCTTTTTCTTGTTTT+TGG	+	chr1_2:73560488-73560507	None:intergenic	25.0%
!	AAACAAGAAAAAGAGTGAAA+AGG	-	chr1_2:73560489-73560508	Msa0091440:intron	25.0%
!	GGATAGAAATTGAAAGTAAA+TGG	+	chr1_2:73560652-73560671	None:intergenic	25.0%
!!!	AGTTTTATTAAATGCGTGTT+CGG	-	chr1_2:73560672-73560691	Msa0091440:intron	25.0%
!	AATTTGGAGAAATTTCACAA+TGG	+	chr1_2:73561212-73561231	None:intergenic	25.0%
!	TTGTGAAATTTCTCCAAATT+AGG	-	chr1_2:73561212-73561231	Msa0091440:intron	25.0%
!	GAATTGGTTAAGATTGTTTA+AGG	-	chr1_2:73561328-73561347	Msa0091440:CDS	25.0%
!	TAGTTATGATAGTTAGAAGT+TGG	-	chr1_2:73561363-73561382	Msa0091440:CDS	25.0%
!	GGTTATATTAGTTATACGTT+AGG	-	chr1_2:73561384-73561403	Msa0091440:CDS	25.0%
!	TATAACCAATATTACAGCTT+CGG	+	chr1_2:73561746-73561765	None:intergenic	25.0%
!!!	TGATGATTATGTTTTGTTCT+TGG	+	chr1_2:73561787-73561806	None:intergenic	25.0%
!!	ATTGTTAAAACAGTAGCTTT+TGG	+	chr1_2:73561898-73561917	None:intergenic	25.0%
!!!	TTTTCTTGTTTTTGGTAAGT+TGG	+	chr1_2:73560480-73560499	None:intergenic	25.0%
!!!	TTCACTCTTTTTCTTGTTTT+TGG	+	chr1_2:73560488-73560507	None:intergenic	25.0%
!	AAACAAGAAAAAGAGTGAAA+AGG	-	chr1_2:73560489-73560508	Msa0091440:intron	25.0%
!	GGATAGAAATTGAAAGTAAA+TGG	+	chr1_2:73560652-73560671	None:intergenic	25.0%
!!!	AGTTTTATTAAATGCGTGTT+CGG	-	chr1_2:73560672-73560691	Msa0091440:intron	25.0%
!	AATTTGGAGAAATTTCACAA+TGG	+	chr1_2:73561212-73561231	None:intergenic	25.0%
!	TTGTGAAATTTCTCCAAATT+AGG	-	chr1_2:73561212-73561231	Msa0091440:intron	25.0%
!	GAATTGGTTAAGATTGTTTA+AGG	-	chr1_2:73561328-73561347	Msa0091440:CDS	25.0%
!	TAGTTATGATAGTTAGAAGT+TGG	-	chr1_2:73561363-73561382	Msa0091440:CDS	25.0%
!	GGTTATATTAGTTATACGTT+AGG	-	chr1_2:73561384-73561403	Msa0091440:CDS	25.0%
!	TATAACCAATATTACAGCTT+CGG	+	chr1_2:73561746-73561765	None:intergenic	25.0%
!!!	TGATGATTATGTTTTGTTCT+TGG	+	chr1_2:73561787-73561806	None:intergenic	25.0%
!!	ATTGTTAAAACAGTAGCTTT+TGG	+	chr1_2:73561898-73561917	None:intergenic	25.0%
	AATTGCAGGGAATTAAAACT+GGG	+	chr1_2:73560115-73560134	Msa0091430:three_prime_UTR	30.0%
	AGAAGTAAGTTTGGTTGATT+TGG	+	chr1_2:73560197-73560216	Msa0091430:three_prime_UTR	30.0%
	AGAGAAAGAGATGTTGAATT+TGG	+	chr1_2:73560260-73560279	Msa0091430:three_prime_UTR	30.0%
	GAACACGCATTTAATAAAAC+TGG	+	chr1_2:73560673-73560692	None:intergenic	30.0%
	GACAATGCATAATATATGCA+AGG	-	chr1_2:73560926-73560945	Msa0091440:intron	30.0%
!	TGCGAAGAGCTAATTTTTAA+AGG	-	chr1_2:73561134-73561153	Msa0091440:intron	30.0%
!!	AGAGCTAATTTTTAAAGGCA+AGG	-	chr1_2:73561139-73561158	Msa0091440:intron	30.0%
	TGCTGCTAAAAAACCTAATT+TGG	+	chr1_2:73561228-73561247	None:intergenic	30.0%
	GTTAATATACCATGACTTCA+TGG	-	chr1_2:73561258-73561277	Msa0091440:intron	30.0%
!!	ATCTAACGGGTTAGATAAAA+TGG	+	chr1_2:73561300-73561319	None:intergenic	30.0%
	CTGTTCATCCAAAAAGAATT+TGG	-	chr1_2:73561595-73561614	Msa0091440:CDS	30.0%
!!	ACTTCAAGAGCATTAAGTAT+AGG	-	chr1_2:73561673-73561692	Msa0091440:CDS	30.0%
!!	TGAAGAAAAGAGAGCATTTA+AGG	-	chr1_2:73561825-73561844	Msa0091440:five_prime_UTR	30.0%
!!	GAAGAAAAGAGAGCATTTAA+GGG	-	chr1_2:73561826-73561845	Msa0091440:five_prime_UTR	30.0%
!!	AGTTTTTGTCTAATTTGCAC+CGG	+	chr1_2:73561864-73561883	None:intergenic	30.0%
	AATTGCAGGGAATTAAAACT+GGG	+	chr1_2:73560115-73560134	Msa0091430:three_prime_UTR	30.0%
	AGAAGTAAGTTTGGTTGATT+TGG	+	chr1_2:73560197-73560216	Msa0091430:three_prime_UTR	30.0%
	AGAGAAAGAGATGTTGAATT+TGG	+	chr1_2:73560260-73560279	Msa0091430:three_prime_UTR	30.0%
	GAACACGCATTTAATAAAAC+TGG	+	chr1_2:73560673-73560692	None:intergenic	30.0%
	GACAATGCATAATATATGCA+AGG	-	chr1_2:73560926-73560945	Msa0091440:intron	30.0%
!	TGCGAAGAGCTAATTTTTAA+AGG	-	chr1_2:73561134-73561153	Msa0091440:intron	30.0%
!!	AGAGCTAATTTTTAAAGGCA+AGG	-	chr1_2:73561139-73561158	Msa0091440:intron	30.0%
	TGCTGCTAAAAAACCTAATT+TGG	+	chr1_2:73561228-73561247	None:intergenic	30.0%
	GTTAATATACCATGACTTCA+TGG	-	chr1_2:73561258-73561277	Msa0091440:intron	30.0%
!!	ATCTAACGGGTTAGATAAAA+TGG	+	chr1_2:73561300-73561319	None:intergenic	30.0%
	CTGTTCATCCAAAAAGAATT+TGG	-	chr1_2:73561595-73561614	Msa0091440:CDS	30.0%
!!	ACTTCAAGAGCATTAAGTAT+AGG	-	chr1_2:73561673-73561692	Msa0091440:CDS	30.0%
!!	TGAAGAAAAGAGAGCATTTA+AGG	-	chr1_2:73561825-73561844	Msa0091440:five_prime_UTR	30.0%
!!	GAAGAAAAGAGAGCATTTAA+GGG	-	chr1_2:73561826-73561845	Msa0091440:five_prime_UTR	30.0%
!!	AGTTTTTGTCTAATTTGCAC+CGG	+	chr1_2:73561864-73561883	None:intergenic	30.0%
	AACCCATACATACTATTCTC+CGG	-	chr1_2:73560033-73560052	Msa0091440:CDS	35.0%
	TTCGTTTCTATCTTATCCGT+TGG	+	chr1_2:73560069-73560088	Msa0091430:three_prime_UTR	35.0%
	GAATTGCAGGGAATTAAAAC+TGG	+	chr1_2:73560116-73560135	Msa0091430:three_prime_UTR	35.0%
	CATTTCTTCTTCGAATTGCA+GGG	+	chr1_2:73560128-73560147	Msa0091430:three_prime_UTR	35.0%
	CTGCAATTCGAAGAAGAAAT+GGG	-	chr1_2:73560127-73560146	Msa0091440:CDS	35.0%
!!	AGTAAGTTTGGTTGATTTGG+TGG	+	chr1_2:73560194-73560213	Msa0091430:three_prime_UTR	35.0%
	GAAAGAGATGTTGAATTTGG+AGG	+	chr1_2:73560257-73560276	Msa0091430:three_prime_UTR	35.0%
!	ATTTCTTTGAGAAAACTGGG+AGG	+	chr1_2:73560418-73560437	None:intergenic	35.0%
!	TCCCAGTTTTCTCAAAGAAA+TGG	-	chr1_2:73560417-73560436	Msa0091440:intron	35.0%
!	GCCATTTCTTTGAGAAAACT+GGG	+	chr1_2:73560421-73560440	None:intergenic	35.0%
!	AGCCATTTCTTTGAGAAAAC+TGG	+	chr1_2:73560422-73560441	None:intergenic	35.0%
!!!	CTTCTCTGATTTTTTGGTAC+CGG	+	chr1_2:73560455-73560474	None:intergenic	35.0%
!!!	TTGGTCCTTCTCTGATTTTT+TGG	+	chr1_2:73560461-73560480	None:intergenic	35.0%
	GAAAATATTAAGGAGGACTC+CGG	-	chr1_2:73560577-73560596	Msa0091440:intron	35.0%
	TGCATAATATATGCAAGGTC+TGG	-	chr1_2:73560931-73560950	Msa0091440:intron	35.0%
	GCATAATATATGCAAGGTCT+GGG	-	chr1_2:73560932-73560951	Msa0091440:intron	35.0%
	CATAATATATGCAAGGTCTG+GGG	-	chr1_2:73560933-73560952	Msa0091440:intron	35.0%
!!	GTTTAGCTTGAAAAGTAGAG+AGG	-	chr1_2:73561000-73561019	Msa0091440:intron	35.0%
	ACACATTTAGTCCAGTACTT+TGG	+	chr1_2:73561061-73561080	None:intergenic	35.0%
	AAAGGCAAGGTTACTGTTAA+CGG	-	chr1_2:73561152-73561171	Msa0091440:intron	35.0%
!	GTAAGTGGCCAAATTCTTTT+TGG	+	chr1_2:73561606-73561625	None:intergenic	35.0%
	ATAAGTGATGCATTCAATGC+AGG	+	chr1_2:73561646-73561665	None:intergenic	35.0%
!!	TCAAGAGCATTAAGTATAGG+AGG	-	chr1_2:73561676-73561695	Msa0091440:CDS	35.0%
!!	GTTTTTGTCTAATTTGCACC+GGG	+	chr1_2:73561863-73561882	None:intergenic	35.0%
	AACCCATACATACTATTCTC+CGG	-	chr1_2:73560033-73560052	Msa0091440:CDS	35.0%
	TTCGTTTCTATCTTATCCGT+TGG	+	chr1_2:73560069-73560088	Msa0091430:three_prime_UTR	35.0%
	GAATTGCAGGGAATTAAAAC+TGG	+	chr1_2:73560116-73560135	Msa0091430:three_prime_UTR	35.0%
	CATTTCTTCTTCGAATTGCA+GGG	+	chr1_2:73560128-73560147	Msa0091430:three_prime_UTR	35.0%
	CTGCAATTCGAAGAAGAAAT+GGG	-	chr1_2:73560127-73560146	Msa0091440:CDS	35.0%
!!	AGTAAGTTTGGTTGATTTGG+TGG	+	chr1_2:73560194-73560213	Msa0091430:three_prime_UTR	35.0%
	GAAAGAGATGTTGAATTTGG+AGG	+	chr1_2:73560257-73560276	Msa0091430:three_prime_UTR	35.0%
!	ATTTCTTTGAGAAAACTGGG+AGG	+	chr1_2:73560418-73560437	None:intergenic	35.0%
!	TCCCAGTTTTCTCAAAGAAA+TGG	-	chr1_2:73560417-73560436	Msa0091440:intron	35.0%
!	GCCATTTCTTTGAGAAAACT+GGG	+	chr1_2:73560421-73560440	None:intergenic	35.0%
!	AGCCATTTCTTTGAGAAAAC+TGG	+	chr1_2:73560422-73560441	None:intergenic	35.0%
!!!	CTTCTCTGATTTTTTGGTAC+CGG	+	chr1_2:73560455-73560474	None:intergenic	35.0%
!!!	TTGGTCCTTCTCTGATTTTT+TGG	+	chr1_2:73560461-73560480	None:intergenic	35.0%
	GAAAATATTAAGGAGGACTC+CGG	-	chr1_2:73560577-73560596	Msa0091440:intron	35.0%
	TGCATAATATATGCAAGGTC+TGG	-	chr1_2:73560931-73560950	Msa0091440:intron	35.0%
	GCATAATATATGCAAGGTCT+GGG	-	chr1_2:73560932-73560951	Msa0091440:intron	35.0%
	CATAATATATGCAAGGTCTG+GGG	-	chr1_2:73560933-73560952	Msa0091440:intron	35.0%
!!	GTTTAGCTTGAAAAGTAGAG+AGG	-	chr1_2:73561000-73561019	Msa0091440:intron	35.0%
	ACACATTTAGTCCAGTACTT+TGG	+	chr1_2:73561061-73561080	None:intergenic	35.0%
	AAAGGCAAGGTTACTGTTAA+CGG	-	chr1_2:73561152-73561171	Msa0091440:intron	35.0%
!	GTAAGTGGCCAAATTCTTTT+TGG	+	chr1_2:73561606-73561625	None:intergenic	35.0%
	ATAAGTGATGCATTCAATGC+AGG	+	chr1_2:73561646-73561665	None:intergenic	35.0%
!!	TCAAGAGCATTAAGTATAGG+AGG	-	chr1_2:73561676-73561695	Msa0091440:CDS	35.0%
!!	GTTTTTGTCTAATTTGCACC+GGG	+	chr1_2:73561863-73561882	None:intergenic	35.0%
	ACCCATACATACTATTCTCC+GGG	-	chr1_2:73560034-73560053	Msa0091440:CDS	40.0%
	ACCCGGAGAATAGTATGTAT+GGG	+	chr1_2:73560038-73560057	Msa0091430:three_prime_UTR	40.0%
	TACCCGGAGAATAGTATGTA+TGG	+	chr1_2:73560039-73560058	Msa0091430:three_prime_UTR	40.0%
	CCATTTCTTCTTCGAATTGC+AGG	+	chr1_2:73560129-73560148	Msa0091430:three_prime_UTR	40.0%
	CCTGCAATTCGAAGAAGAAA+TGG	-	chr1_2:73560126-73560145	Msa0091440:CDS	40.0%
!!	AAGTTTGGTTGATTTGGTGG+TGG	+	chr1_2:73560191-73560210	Msa0091430:three_prime_UTR	40.0%
	AGAGATGTTGAATTTGGAGG+AGG	+	chr1_2:73560254-73560273	Msa0091430:three_prime_UTR	40.0%
	GAAATGGCTAATGCTCAAAC+CGG	-	chr1_2:73560433-73560452	Msa0091440:intron	40.0%
	CGGTACCAAAAAATCAGAGA+AGG	-	chr1_2:73560453-73560472	Msa0091440:intron	40.0%
	AAAGGAAACCAAGATTCGTG+CGG	-	chr1_2:73560507-73560526	Msa0091440:intron	40.0%
!	TGGTAACGAAATATCACCTC+CGG	+	chr1_2:73560632-73560651	None:intergenic	40.0%
	TGTAATCAGAATAGCCAGTG+TGG	+	chr1_2:73560713-73560732	None:intergenic	40.0%
	TGAGCTTAGCTCAATTGGTA+AGG	-	chr1_2:73560904-73560923	Msa0091440:intron	40.0%
	TTCTGCTTTCAGTTGCATCT+AGG	-	chr1_2:73561105-73561124	Msa0091440:intron	40.0%
	TTCTGTCTGTAATACACCTC+AGG	-	chr1_2:73561175-73561194	Msa0091440:intron	40.0%
	GGAGAAATTTCACAATGGCA+GGG	+	chr1_2:73561207-73561226	None:intergenic	40.0%
	TGGAGAAATTTCACAATGGC+AGG	+	chr1_2:73561208-73561227	None:intergenic	40.0%
!	AGCTCTAATCCATGAAGTCA+TGG	+	chr1_2:73561270-73561289	None:intergenic	40.0%
	ATTCGCCGAAGCTGTAATAT+TGG	-	chr1_2:73561738-73561757	Msa0091440:CDS	40.0%
!!	AGAGAGCATTTAAGGGCAAA+AGG	-	chr1_2:73561833-73561852	Msa0091440:five_prime_UTR	40.0%
!!	GAGAGCATTTAAGGGCAAAA+GGG	-	chr1_2:73561834-73561853	Msa0091440:five_prime_UTR	40.0%
	ACCCATACATACTATTCTCC+GGG	-	chr1_2:73560034-73560053	Msa0091440:CDS	40.0%
	ACCCGGAGAATAGTATGTAT+GGG	+	chr1_2:73560038-73560057	Msa0091430:three_prime_UTR	40.0%
	TACCCGGAGAATAGTATGTA+TGG	+	chr1_2:73560039-73560058	Msa0091430:three_prime_UTR	40.0%
	CCATTTCTTCTTCGAATTGC+AGG	+	chr1_2:73560129-73560148	Msa0091430:three_prime_UTR	40.0%
	CCTGCAATTCGAAGAAGAAA+TGG	-	chr1_2:73560126-73560145	Msa0091440:CDS	40.0%
!!	AAGTTTGGTTGATTTGGTGG+TGG	+	chr1_2:73560191-73560210	Msa0091430:three_prime_UTR	40.0%
	AGAGATGTTGAATTTGGAGG+AGG	+	chr1_2:73560254-73560273	Msa0091430:three_prime_UTR	40.0%
	GAAATGGCTAATGCTCAAAC+CGG	-	chr1_2:73560433-73560452	Msa0091440:intron	40.0%
	CGGTACCAAAAAATCAGAGA+AGG	-	chr1_2:73560453-73560472	Msa0091440:intron	40.0%
	AAAGGAAACCAAGATTCGTG+CGG	-	chr1_2:73560507-73560526	Msa0091440:intron	40.0%
!	TGGTAACGAAATATCACCTC+CGG	+	chr1_2:73560632-73560651	None:intergenic	40.0%
	TGTAATCAGAATAGCCAGTG+TGG	+	chr1_2:73560713-73560732	None:intergenic	40.0%
	TGAGCTTAGCTCAATTGGTA+AGG	-	chr1_2:73560904-73560923	Msa0091440:intron	40.0%
	TTCTGCTTTCAGTTGCATCT+AGG	-	chr1_2:73561105-73561124	Msa0091440:intron	40.0%
	TTCTGTCTGTAATACACCTC+AGG	-	chr1_2:73561175-73561194	Msa0091440:intron	40.0%
	GGAGAAATTTCACAATGGCA+GGG	+	chr1_2:73561207-73561226	None:intergenic	40.0%
	TGGAGAAATTTCACAATGGC+AGG	+	chr1_2:73561208-73561227	None:intergenic	40.0%
!	AGCTCTAATCCATGAAGTCA+TGG	+	chr1_2:73561270-73561289	None:intergenic	40.0%
	ATTCGCCGAAGCTGTAATAT+TGG	-	chr1_2:73561738-73561757	Msa0091440:CDS	40.0%
!!	AGAGAGCATTTAAGGGCAAA+AGG	-	chr1_2:73561833-73561852	Msa0091440:five_prime_UTR	40.0%
!!	GAGAGCATTTAAGGGCAAAA+GGG	-	chr1_2:73561834-73561853	Msa0091440:five_prime_UTR	40.0%
!	CGAAGAAGAAATGGGTTCAG+CGG	-	chr1_2:73560135-73560154	Msa0091440:CDS	45.0%
	GCGGAAGGTAGAAGTAAGTT+TGG	+	chr1_2:73560206-73560225	Msa0091430:three_prime_UTR	45.0%
	GATGTTGAATTTGGAGGAGG+AGG	+	chr1_2:73560251-73560270	Msa0091430:three_prime_UTR	45.0%
	ACAATCCACGGAATCATGAG+AGG	+	chr1_2:73560355-73560374	Msa0091430:three_prime_UTR	45.0%
!	ATGATTCCGTGGATTGTTCG+CGG	-	chr1_2:73560358-73560377	Msa0091440:intron	45.0%
!	TCTTTGAGAAAACTGGGAGG+AGG	+	chr1_2:73560415-73560434	None:intergenic	45.0%
!!	CTAGCCGCTTTAGAATACTG+CGG	+	chr1_2:73560544-73560563	None:intergenic	45.0%
	AACCTTACTGAGACGAGTAC+CGG	+	chr1_2:73560599-73560618	None:intergenic	45.0%
	AATCAGAATAGCCAGTGTGG+TGG	+	chr1_2:73560710-73560729	None:intergenic	45.0%
	CCAATTGAGCTAAGCTCACT+GGG	+	chr1_2:73560902-73560921	None:intergenic	45.0%
	ACCAATTGAGCTAAGCTCAC+TGG	+	chr1_2:73560903-73560922	None:intergenic	45.0%
	CACCTGATGATCCAAAGTAC+TGG	-	chr1_2:73561047-73561066	Msa0091440:intron	45.0%
	GTCCAGTACTTTGGATCATC+AGG	+	chr1_2:73561052-73561071	None:intergenic	45.0%
	CAGATAGCAGAGATGGTAAG+TGG	+	chr1_2:73561621-73561640	None:intergenic	45.0%
!	CGAAGAAGAAATGGGTTCAG+CGG	-	chr1_2:73560135-73560154	Msa0091440:CDS	45.0%
	GCGGAAGGTAGAAGTAAGTT+TGG	+	chr1_2:73560206-73560225	Msa0091430:three_prime_UTR	45.0%
	GATGTTGAATTTGGAGGAGG+AGG	+	chr1_2:73560251-73560270	Msa0091430:three_prime_UTR	45.0%
	ACAATCCACGGAATCATGAG+AGG	+	chr1_2:73560355-73560374	Msa0091430:three_prime_UTR	45.0%
!	ATGATTCCGTGGATTGTTCG+CGG	-	chr1_2:73560358-73560377	Msa0091440:intron	45.0%
!	TCTTTGAGAAAACTGGGAGG+AGG	+	chr1_2:73560415-73560434	None:intergenic	45.0%
!!	CTAGCCGCTTTAGAATACTG+CGG	+	chr1_2:73560544-73560563	None:intergenic	45.0%
	AACCTTACTGAGACGAGTAC+CGG	+	chr1_2:73560599-73560618	None:intergenic	45.0%
	AATCAGAATAGCCAGTGTGG+TGG	+	chr1_2:73560710-73560729	None:intergenic	45.0%
	CCAATTGAGCTAAGCTCACT+GGG	+	chr1_2:73560902-73560921	None:intergenic	45.0%
	ACCAATTGAGCTAAGCTCAC+TGG	+	chr1_2:73560903-73560922	None:intergenic	45.0%
	CACCTGATGATCCAAAGTAC+TGG	-	chr1_2:73561047-73561066	Msa0091440:intron	45.0%
	GTCCAGTACTTTGGATCATC+AGG	+	chr1_2:73561052-73561071	None:intergenic	45.0%
	CAGATAGCAGAGATGGTAAG+TGG	+	chr1_2:73561621-73561640	None:intergenic	45.0%
	TGAACACCCCTATTCCTGAG+AGG	-	chr1_2:73560009-73560028	Msa0091440:CDS	50.0%
	GAACACCCCTATTCCTGAGA+GGG	-	chr1_2:73560010-73560029	Msa0091440:CDS	50.0%
	TGGGTTCCCTCTCAGGAATA+GGG	+	chr1_2:73560019-73560038	Msa0091430:three_prime_UTR	50.0%
	ATGGGTTCCCTCTCAGGAAT+AGG	+	chr1_2:73560020-73560039	Msa0091430:three_prime_UTR	50.0%
	GTATGTATGGGTTCCCTCTC+AGG	+	chr1_2:73560026-73560045	Msa0091430:three_prime_UTR	50.0%
!!	ATCCGTTGGCTTTGCATACC+CGG	+	chr1_2:73560055-73560074	Msa0091430:three_prime_UTR	50.0%
!	AATGGGTTCAGCGGCAACAA+TGG	-	chr1_2:73560144-73560163	Msa0091440:CDS	50.0%
	AGGAGGAACAAGTGAAGCGA+GGG	+	chr1_2:73560234-73560253	Msa0091430:three_prime_UTR	50.0%
!!	TTGTCGGGGGTTTGGGTTTT+GGG	+	chr1_2:73560316-73560335	Msa0091430:three_prime_UTR	50.0%
	ACCTTCGTCATCGTCGTTGT+CGG	+	chr1_2:73560332-73560351	Msa0091430:three_prime_UTR	50.0%
	AAGGTCCTCTCATGATTCCG+TGG	-	chr1_2:73560347-73560366	Msa0091440:intron	50.0%
!!	CGCAGTATTCTAAAGCGGCT+AGG	-	chr1_2:73560542-73560561	Msa0091440:intron	50.0%
	CGAAATATCACCTCCGGATG+CGG	+	chr1_2:73560626-73560645	None:intergenic	50.0%
	CCCAGTGAGCTTAGCTCAAT+TGG	-	chr1_2:73560899-73560918	Msa0091440:intron	50.0%
	AATGGCAGGGAACAAACCTG+AGG	+	chr1_2:73561194-73561213	None:intergenic	50.0%
	GCAGGAACAGATAGCAGAGA+TGG	+	chr1_2:73561628-73561647	None:intergenic	50.0%
	TTAAGGGCAAAAGGGCAACC+CGG	-	chr1_2:73561842-73561861	Msa0091440:five_prime_UTR	50.0%
	TGAACACCCCTATTCCTGAG+AGG	-	chr1_2:73560009-73560028	Msa0091440:CDS	50.0%
	GAACACCCCTATTCCTGAGA+GGG	-	chr1_2:73560010-73560029	Msa0091440:CDS	50.0%
	TGGGTTCCCTCTCAGGAATA+GGG	+	chr1_2:73560019-73560038	Msa0091430:three_prime_UTR	50.0%
	ATGGGTTCCCTCTCAGGAAT+AGG	+	chr1_2:73560020-73560039	Msa0091430:three_prime_UTR	50.0%
	GTATGTATGGGTTCCCTCTC+AGG	+	chr1_2:73560026-73560045	Msa0091430:three_prime_UTR	50.0%
!!	ATCCGTTGGCTTTGCATACC+CGG	+	chr1_2:73560055-73560074	Msa0091430:three_prime_UTR	50.0%
!	AATGGGTTCAGCGGCAACAA+TGG	-	chr1_2:73560144-73560163	Msa0091440:CDS	50.0%
	AGGAGGAACAAGTGAAGCGA+GGG	+	chr1_2:73560234-73560253	Msa0091430:three_prime_UTR	50.0%
!!	TTGTCGGGGGTTTGGGTTTT+GGG	+	chr1_2:73560316-73560335	Msa0091430:three_prime_UTR	50.0%
	ACCTTCGTCATCGTCGTTGT+CGG	+	chr1_2:73560332-73560351	Msa0091430:three_prime_UTR	50.0%
	AAGGTCCTCTCATGATTCCG+TGG	-	chr1_2:73560347-73560366	Msa0091440:intron	50.0%
!!	CGCAGTATTCTAAAGCGGCT+AGG	-	chr1_2:73560542-73560561	Msa0091440:intron	50.0%
	CGAAATATCACCTCCGGATG+CGG	+	chr1_2:73560626-73560645	None:intergenic	50.0%
	CCCAGTGAGCTTAGCTCAAT+TGG	-	chr1_2:73560899-73560918	Msa0091440:intron	50.0%
	AATGGCAGGGAACAAACCTG+AGG	+	chr1_2:73561194-73561213	None:intergenic	50.0%
	GCAGGAACAGATAGCAGAGA+TGG	+	chr1_2:73561628-73561647	None:intergenic	50.0%
	TTAAGGGCAAAAGGGCAACC+CGG	-	chr1_2:73561842-73561861	Msa0091440:five_prime_UTR	50.0%
	GGGTTCCCTCTCAGGAATAG+GGG	+	chr1_2:73560018-73560037	Msa0091430:three_prime_UTR	55.0%
	CTCCGGGTATGCAAAGCCAA+CGG	-	chr1_2:73560050-73560069	Msa0091440:CDS	55.0%
	AAGTGAAGCGAGGGAGAGTG+CGG	+	chr1_2:73560225-73560244	Msa0091430:three_prime_UTR	55.0%
	GAGGAGGAACAAGTGAAGCG+AGG	+	chr1_2:73560235-73560254	Msa0091430:three_prime_UTR	55.0%
!	GGCTTGGGTTTGGGGTTAGA+GGG	+	chr1_2:73560283-73560302	Msa0091430:three_prime_UTR	55.0%
!!!	TTGGGTTTTGGGCTGAGGAG+CGG	+	chr1_2:73560305-73560324	Msa0091430:three_prime_UTR	55.0%
!!	GTTGTCGGGGGTTTGGGTTT+TGG	+	chr1_2:73560317-73560336	Msa0091430:three_prime_UTR	55.0%
	ATCGTCGTTGTCGGGGGTTT+GGG	+	chr1_2:73560323-73560342	Msa0091430:three_prime_UTR	55.0%
	TTCGTCATCGTCGTTGTCGG+GGG	+	chr1_2:73560329-73560348	Msa0091430:three_prime_UTR	55.0%
	CTTCGTCATCGTCGTTGTCG+GGG	+	chr1_2:73560330-73560349	Msa0091430:three_prime_UTR	55.0%
	CCTTCGTCATCGTCGTTGTC+GGG	+	chr1_2:73560331-73560350	Msa0091430:three_prime_UTR	55.0%
	TCTTCGCCGCGAACAATCCA+CGG	+	chr1_2:73560367-73560386	Msa0091430:three_prime_UTR	55.0%
	TGGATTGTTCGCGGCGAAGA+TGG	-	chr1_2:73560367-73560386	Msa0091440:intron	55.0%
!	GCCGCCGCAGTATTCTAAAG+CGG	-	chr1_2:73560537-73560556	Msa0091440:intron	55.0%
!!	GCCGCTTTAGAATACTGCGG+CGG	+	chr1_2:73560541-73560560	None:intergenic	55.0%
	CTCCGGTACTCGTCTCAGTA+AGG	-	chr1_2:73560594-73560613	Msa0091440:intron	55.0%
	AGTAAGGTTCTCGCCGCATC+CGG	-	chr1_2:73560610-73560629	Msa0091440:intron	55.0%
	CAGAATAGCCAGTGTGGTGG+CGG	+	chr1_2:73560707-73560726	None:intergenic	55.0%
	GGGTTCCCTCTCAGGAATAG+GGG	+	chr1_2:73560018-73560037	Msa0091430:three_prime_UTR	55.0%
	CTCCGGGTATGCAAAGCCAA+CGG	-	chr1_2:73560050-73560069	Msa0091440:CDS	55.0%
	AAGTGAAGCGAGGGAGAGTG+CGG	+	chr1_2:73560225-73560244	Msa0091430:three_prime_UTR	55.0%
	GAGGAGGAACAAGTGAAGCG+AGG	+	chr1_2:73560235-73560254	Msa0091430:three_prime_UTR	55.0%
!	GGCTTGGGTTTGGGGTTAGA+GGG	+	chr1_2:73560283-73560302	Msa0091430:three_prime_UTR	55.0%
!!!	TTGGGTTTTGGGCTGAGGAG+CGG	+	chr1_2:73560305-73560324	Msa0091430:three_prime_UTR	55.0%
!!	GTTGTCGGGGGTTTGGGTTT+TGG	+	chr1_2:73560317-73560336	Msa0091430:three_prime_UTR	55.0%
	ATCGTCGTTGTCGGGGGTTT+GGG	+	chr1_2:73560323-73560342	Msa0091430:three_prime_UTR	55.0%
	TTCGTCATCGTCGTTGTCGG+GGG	+	chr1_2:73560329-73560348	Msa0091430:three_prime_UTR	55.0%
	CTTCGTCATCGTCGTTGTCG+GGG	+	chr1_2:73560330-73560349	Msa0091430:three_prime_UTR	55.0%
	CCTTCGTCATCGTCGTTGTC+GGG	+	chr1_2:73560331-73560350	Msa0091430:three_prime_UTR	55.0%
	TCTTCGCCGCGAACAATCCA+CGG	+	chr1_2:73560367-73560386	Msa0091430:three_prime_UTR	55.0%
	TGGATTGTTCGCGGCGAAGA+TGG	-	chr1_2:73560367-73560386	Msa0091440:intron	55.0%
!	GCCGCCGCAGTATTCTAAAG+CGG	-	chr1_2:73560537-73560556	Msa0091440:intron	55.0%
!!	GCCGCTTTAGAATACTGCGG+CGG	+	chr1_2:73560541-73560560	None:intergenic	55.0%
	CTCCGGTACTCGTCTCAGTA+AGG	-	chr1_2:73560594-73560613	Msa0091440:intron	55.0%
	AGTAAGGTTCTCGCCGCATC+CGG	-	chr1_2:73560610-73560629	Msa0091440:intron	55.0%
	CAGAATAGCCAGTGTGGTGG+CGG	+	chr1_2:73560707-73560726	None:intergenic	55.0%
!	GGGCTTGGGTTTGGGGTTAG+AGG	+	chr1_2:73560284-73560303	Msa0091430:three_prime_UTR	60.0%
!	TGAGGAGCGGGCTTGGGTTT+GGG	+	chr1_2:73560292-73560311	Msa0091430:three_prime_UTR	60.0%
!!!	TGGGTTTTGGGCTGAGGAGC+GGG	+	chr1_2:73560304-73560323	Msa0091430:three_prime_UTR	60.0%
!!!	GGGGTTTGGGTTTTGGGCTG+AGG	+	chr1_2:73560310-73560329	Msa0091430:three_prime_UTR	60.0%
	CATCGTCGTTGTCGGGGGTT+TGG	+	chr1_2:73560324-73560343	Msa0091430:three_prime_UTR	60.0%
	CCCGACAACGACGATGACGA+AGG	-	chr1_2:73560328-73560347	Msa0091440:CDS	60.0%
	CGCTGTCACCGCACGAATCT+TGG	+	chr1_2:73560518-73560537	None:intergenic	60.0%
	GTTTGACTCCGCCACCACAC+TGG	-	chr1_2:73560696-73560715	Msa0091440:intron	60.0%
!	GGGCTTGGGTTTGGGGTTAG+AGG	+	chr1_2:73560284-73560303	Msa0091430:three_prime_UTR	60.0%
!	TGAGGAGCGGGCTTGGGTTT+GGG	+	chr1_2:73560292-73560311	Msa0091430:three_prime_UTR	60.0%
!!!	TGGGTTTTGGGCTGAGGAGC+GGG	+	chr1_2:73560304-73560323	Msa0091430:three_prime_UTR	60.0%
!!!	GGGGTTTGGGTTTTGGGCTG+AGG	+	chr1_2:73560310-73560329	Msa0091430:three_prime_UTR	60.0%
	CATCGTCGTTGTCGGGGGTT+TGG	+	chr1_2:73560324-73560343	Msa0091430:three_prime_UTR	60.0%
	CCCGACAACGACGATGACGA+AGG	-	chr1_2:73560328-73560347	Msa0091440:CDS	60.0%
	CGCTGTCACCGCACGAATCT+TGG	+	chr1_2:73560518-73560537	None:intergenic	60.0%
	GTTTGACTCCGCCACCACAC+TGG	-	chr1_2:73560696-73560715	Msa0091440:intron	60.0%
!	GAAGCGAGGGAGAGTGCGGA+AGG	+	chr1_2:73560221-73560240	Msa0091430:three_prime_UTR	65.0%
!	GAGGAGCGGGCTTGGGTTTG+GGG	+	chr1_2:73560291-73560310	Msa0091430:three_prime_UTR	65.0%
!	CTGAGGAGCGGGCTTGGGTT+TGG	+	chr1_2:73560293-73560312	Msa0091430:three_prime_UTR	65.0%
!	TTGGGCTGAGGAGCGGGCTT+GGG	+	chr1_2:73560298-73560317	Msa0091430:three_prime_UTR	65.0%
!	TTTGGGCTGAGGAGCGGGCT+TGG	+	chr1_2:73560299-73560318	Msa0091430:three_prime_UTR	65.0%
	AAGGTTCTCGCCGCATCCGG+AGG	-	chr1_2:73560613-73560632	Msa0091440:intron	65.0%
!	GAAGCGAGGGAGAGTGCGGA+AGG	+	chr1_2:73560221-73560240	Msa0091430:three_prime_UTR	65.0%
!	GAGGAGCGGGCTTGGGTTTG+GGG	+	chr1_2:73560291-73560310	Msa0091430:three_prime_UTR	65.0%
!	CTGAGGAGCGGGCTTGGGTT+TGG	+	chr1_2:73560293-73560312	Msa0091430:three_prime_UTR	65.0%
!	TTGGGCTGAGGAGCGGGCTT+GGG	+	chr1_2:73560298-73560317	Msa0091430:three_prime_UTR	65.0%
!	TTTGGGCTGAGGAGCGGGCT+TGG	+	chr1_2:73560299-73560318	Msa0091430:three_prime_UTR	65.0%
	AAGGTTCTCGCCGCATCCGG+AGG	-	chr1_2:73560613-73560632	Msa0091440:intron	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_2	gene	73560004	73561936	73560004	ID=Msa0091440;Name=Msa0091440
chr1_2	mRNA	73560004	73561936	73560004	ID=Msa0091440-mRNA-1;Parent=Msa0091440;Name=Msa0091440-mRNA-1;_AED=0.17;_eAED=0.17;_QI=141\|0.5\|0.66\|0.66\|1\|1\|3\|0\|308
chr1_2	exon	73560004	73560360	73560004	ID=Msa0091440-mRNA-1:exon:25826;Parent=Msa0091440-mRNA-1
chr1_2	exon	73560744	73560823	73560744	ID=Msa0091440-mRNA-1:exon:25825;Parent=Msa0091440-mRNA-1
chr1_2	exon	73561306	73561936	73561306	ID=Msa0091440-mRNA-1:exon:25824;Parent=Msa0091440-mRNA-1
chr1_2	five_prime_UTR	73561796	73561936	73561796	ID=Msa0091440-mRNA-1:five_prime_utr;Parent=Msa0091440-mRNA-1
chr1_2	CDS	73561306	73561795	73561306	ID=Msa0091440-mRNA-1:cds;Parent=Msa0091440-mRNA-1
chr1_2	CDS	73560744	73560823	73560744	ID=Msa0091440-mRNA-1:cds;Parent=Msa0091440-mRNA-1
chr1_2	CDS	73560004	73560360	73560004	ID=Msa0091440-mRNA-1:cds;Parent=Msa0091440-mRNA-1

Gene Sequence

>Msa0091440

ATGGGTTCAGCGGCAACAATGGCAATGACAGCACTCTATTTCACCACCACCAAATCAACCAAACTTACTTCTACCTTCCGCACTCTCCCTCGCTTCACTTGTTCCTCCTCCTCCAAATTCAACATCTCTTTCTCTCCCTCTAACCCCAAACCCAAGCCCGCTCCTCAGCCCAAAACCCAAACCCCCGACAACGACGATGACGAAGGTCCTCTCATGATTCCGTGGATTGTTCGCGGCGAAGATGGCAACTTCAAGCTTCTATCAGAGCCTCCTCCCAGTTTTCTCAAAGAAATGGCTAATGCTCAAACCGGTACCAAAAAATCAGAGAAGGACCAACTTACCAAAAACAAGAAAAAGAGTGAAAAGGAAACCAAGATTCGTGCGGTGACAGCGCCGCCGCAGTATTCTAAAGCGGCTAGGAGATTCTATAATGAAAATATTAAGGAGGACTCCGGTACTCGTCTCAGTAAGGTTCTCGCCGCATCCGGAGTTGCATCTAGGAGAAGCTGCGAAGAGCTAATTTTTAAAGGCAAGGTTACTGTTAACGGTTCTGTCTGTAATACACCTCAGTTCTTAATTTATAAGCTGTTCATCCAAAAAGAATTTGGCCACTTACCATCTCTGCTATCTGTTCCTGCATTGAATGCATCACTTATAGTAAAAACTTCAAGAGCATTAAGTATAGGAGGAAGAGAAGAAGACTCTGAAGCTTGCAGAACAAATGTAGTATTCGCCGAAGCTGTAATATTGGTTATATACACTTCTTTCACAGTTCCAAGAACAAAACATAATCATCAGCAAAAACAAATCATCAATGAAGAAAAGAGAGCATTTAAGGGCAAAAGGGCAACCCGGTGCAAATTAGACAAAAACTGCAAAGTTTCACCAAAAGCTACTGTTTTAACAATAGATAAAAAAACATTCTAA

Protein sequence

>Msa0091440

MGSAATMAMTALYFTTTKSTKLTSTFRTLPRFTCSSSSKFNISFSPSNPKPKPAPQPKTQTPDNDDDEGPLMIPWIVRGEDGNFKLLSEPPPSFLKEMANAQTGTKKSEKDQLTKNKKKSEKETKIRAVTAPPQYSKAARRFYNENIKEDSGTRLSKVLAASGVASRRSCEELIFKGKVTVNGSVCNTPQFLIYKLFIQKEFGHLPSLLSVPALNASLIVKTSRALSIGGREEDSEACRTNVVFAEAVILVIYTSFTVPRTKHNHQQKQIINEEKRAFKGKRATRCKLDKNCKVSPKATVLTIDKKTF*