AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0009890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009890 MtrunA17_Chr1g0158881 93.520 787 10 4 1 755 1 778 0.0 1471
Msa0009890 MtrunA17_Chr3g0135721 48.287 642 244 11 166 751 66 675 0.0 559
Msa0009890 MtrunA17_Chr3g0135761 50.404 619 226 13 179 748 79 665 0.0 559
Msa0009890 MtrunA17_Chr5g0432631 56.250 480 158 7 291 731 195 661 2.57e-172 517
Msa0009890 MtrunA17_Chr8g0362771 54.584 469 167 6 325 751 225 689 8.64e-169 503
Msa0009890 MtrunA17_Chr5g0432641 52.941 442 170 4 328 731 182 623 6.63e-144 437
Msa0009890 MtrunA17_Chr4g0052411 47.884 449 184 3 337 736 230 677 6.74e-127 394
Msa0009890 MtrunA17_Chr2g0297281 47.991 448 184 4 337 736 287 733 9.56e-126 392
Msa0009890 MtrunA17_Chr7g0217421 53.552 366 164 3 328 689 32 395 1.37e-125 380
Msa0009890 MtrunA17_Chr3g0143721 47.473 455 186 4 330 732 244 697 2.19e-125 390
Msa0009890 MtrunA17_Chr7g0248361 48.209 363 177 4 333 687 189 548 1.94e-105 336
Msa0009890 MtrunA17_Chr6g0476861 44.643 392 196 5 306 687 173 553 2.52e-104 334
Msa0009890 MtrunA17_Chr7g0260601 40.741 486 227 10 307 740 214 690 5.71e-103 332
Msa0009890 MtrunA17_Chr4g0031821 40.260 539 257 12 269 749 254 785 6.62e-103 334
Msa0009890 MtrunA17_Chr5g0432391 43.823 429 152 6 332 724 49 424 5.10e-99 313
Msa0009890 MtrunA17_Chr5g0429571 49.311 363 164 9 337 683 314 672 1.72e-94 311
Msa0009890 MtrunA17_Chr3g0104211 48.199 361 171 7 337 683 305 663 1.32e-93 309
Msa0009890 MtrunA17_Chr3g0094871 45.378 357 171 6 338 687 13 352 1.21e-92 296
Msa0009890 MtrunA17_Chr2g0331161 39.908 436 212 10 338 731 417 844 5.32e-80 274
Msa0009890 MtrunA17_Chr8g0388371 43.478 368 184 7 338 684 406 770 1.23e-79 274
Msa0009890 MtrunA17_Chr1g0168321 41.047 363 166 5 333 687 161 483 1.25e-79 264
Msa0009890 MtrunA17_Chr3g0135791 48.638 257 92 2 524 745 7 258 3.91e-74 243
Msa0009890 MtrunA17_Chr6g0456351 49.259 270 134 2 327 593 308 577 7.02e-71 243
Msa0009890 MtrunA17_Chr3g0135781 60.440 182 63 3 313 493 40 213 5.70e-65 215
Msa0009890 MtrunA17_Chr3g0129971 35.828 441 237 9 332 727 292 731 1.50e-58 213
Msa0009890 MtrunA17_Chr3g0135741 60.448 134 53 0 524 657 5 138 8.56e-53 179
Msa0009890 MtrunA17_Chr8g0357301 32.552 384 211 7 339 688 473 842 1.46e-51 194
Msa0009890 MtrunA17_Chr1g0180791 40.856 257 143 4 311 562 457 709 1.35e-50 190
Msa0009890 MtrunA17_Chr1g0180791 42.601 223 126 2 338 558 207 429 1.54e-44 172
Msa0009890 MtrunA17_Chr2g0327121 40.625 256 143 4 312 562 460 711 6.29e-50 188
Msa0009890 MtrunA17_Chr2g0327121 42.601 223 126 2 338 558 209 431 5.00e-45 173
Msa0009890 MtrunA17_Chr1g0192151 43.578 218 118 2 332 544 163 380 2.49e-49 179
Msa0009890 MtrunA17_Chr4g0014731 43.578 218 118 2 332 544 164 381 3.57e-49 179
Msa0009890 MtrunA17_Chr3g0141901 43.111 225 121 3 337 555 137 360 3.69e-49 178
Msa0009890 MtrunA17_Chr7g0264521 39.689 257 146 4 311 562 458 710 4.37e-49 185
Msa0009890 MtrunA17_Chr7g0264521 42.152 223 127 2 338 558 208 430 3.57e-44 171
Msa0009890 MtrunA17_Chr3g0145011 42.667 225 122 3 337 555 140 363 1.08e-48 177
Msa0009890 MtrunA17_Chr4g0050561 38.976 254 149 2 337 584 157 410 1.32e-48 177
Msa0009890 MtrunA17_Chr8g0345461 36.863 255 156 2 332 581 161 415 1.97e-47 174
Msa0009890 MtrunA17_Chr7g0255651 42.918 233 117 4 337 557 283 511 8.05e-47 176
Msa0009890 MtrunA17_Chr7g0255651 30.841 214 135 5 355 557 29 240 2.19e-19 92.8
Msa0009890 MtrunA17_Chr1g0182711 37.600 250 147 3 335 577 187 434 6.44e-46 170
Msa0009890 MtrunA17_Chr7g0262801 37.600 250 147 3 335 577 186 433 8.80e-46 169
Msa0009890 MtrunA17_Chr1g0200081 36.471 255 156 3 332 581 171 424 3.17e-45 168
Msa0009890 MtrunA17_Chr3g0108321 43.979 191 98 3 332 515 155 343 4.00e-43 160
Msa0009890 MtrunA17_Chr2g0277831 41.593 226 127 4 334 555 532 756 6.74e-43 167
Msa0009890 MtrunA17_Chr2g0277831 43.636 220 119 2 338 552 245 464 3.00e-41 162
Msa0009890 MtrunA17_Chr7g0255721 39.516 248 146 3 327 570 676 923 6.82e-42 164
Msa0009890 MtrunA17_Chr7g0255721 39.801 201 119 2 364 562 413 613 3.15e-31 131
Msa0009890 MtrunA17_Chr7g0255691 40.948 232 129 3 337 560 287 518 9.10e-41 157
Msa0009890 MtrunA17_Chr7g0255691 36.681 229 129 6 341 558 22 245 1.79e-27 117
Msa0009890 MtrunA17_Chr3g0086411 37.586 290 146 10 331 599 211 486 8.36e-39 150
Msa0009890 MtrunA17_Chr3g0086411 38.728 173 76 5 423 583 7 161 1.08e-20 96.3
Msa0009890 MtrunA17_Chr7g0255641 37.097 248 152 3 327 570 649 896 6.54e-38 152
Msa0009890 MtrunA17_Chr7g0255641 39.512 205 114 6 351 551 411 609 1.97e-29 125
Msa0009890 MtrunA17_Chr4g0026631 40.773 233 122 10 325 548 116 341 1.11e-37 146
Msa0009890 MtrunA17_Chr2g0316851 38.197 233 134 5 332 555 590 821 6.95e-37 149
Msa0009890 MtrunA17_Chr8g0387641 38.934 244 137 7 323 558 507 746 1.93e-36 147
Msa0009890 MtrunA17_Chr4g0043381 34.866 261 164 4 338 592 839 1099 3.63e-36 147
Msa0009890 MtrunA17_Chr1g0190401 27.912 498 246 14 340 730 681 1172 5.32e-36 146
Msa0009890 MtrunA17_Chr2g0321241 38.793 232 128 8 325 548 121 346 1.15e-35 140
Msa0009890 MtrunA17_Chr3g0086401 37.860 243 129 5 338 558 387 629 1.19e-35 144
Msa0009890 MtrunA17_Chr3g0086401 37.555 229 128 5 332 548 88 313 6.15e-32 132
Msa0009890 MtrunA17_Chr1g0202381 38.819 237 135 7 325 554 456 689 1.44e-35 144
Msa0009890 MtrunA17_Chr6g0462581 40.164 244 133 8 323 558 486 724 2.11e-35 144
Msa0009890 MtrunA17_Chr1g0202371 37.815 238 139 7 323 554 383 617 2.34e-34 140
Msa0009890 MtrunA17_Chr5g0397121 36.641 262 149 8 310 558 481 738 8.87e-34 139
Msa0009890 MtrunA17_Chr1g0195741 38.912 239 133 7 323 552 924 1158 1.50e-33 139
Msa0009890 MtrunA17_Chr1g0204031 38.174 241 139 8 325 558 545 782 1.55e-33 138
Msa0009890 MtrunA17_Chr4g0004121 33.550 307 176 9 295 577 195 497 6.11e-33 134
Msa0009890 MtrunA17_Chr6g0459561 36.864 236 138 7 325 553 371 602 7.05e-33 135
Msa0009890 MtrunA17_Chr3g0116131 37.657 239 136 7 323 552 888 1122 1.53e-32 135
Msa0009890 MtrunA17_Chr1g0195731 36.820 239 138 7 323 552 920 1154 1.54e-32 135
Msa0009890 MtrunA17_Chr5g0432671 55.455 110 45 1 532 641 3 108 4.03e-32 120
Msa0009890 MtrunA17_Chr7g0255901 35.371 229 141 5 334 556 638 865 5.34e-32 133
Msa0009890 MtrunA17_Chr4g0033451 34.444 270 166 6 337 597 381 648 2.36e-31 132
Msa0009890 MtrunA17_Chr2g0327231 40.828 169 92 4 327 490 340 505 3.49e-31 128
Msa0009890 MtrunA17_Chr4g0052271 37.168 226 133 6 334 554 118 339 4.48e-31 126
Msa0009890 MtrunA17_Chr4g0038101 37.004 227 135 5 338 558 723 947 6.31e-31 130
Msa0009890 MtrunA17_Chr3g0127431 37.387 222 128 6 338 552 86 303 6.84e-29 119
Msa0009890 MtrunA17_Chr3g0127401 33.091 275 160 8 338 595 83 350 6.72e-28 116
Msa0009890 MtrunA17_Chr6g0459541 30.435 276 148 9 323 562 29 296 4.04e-27 113
Msa0009890 MtrunA17_Chr7g0246111 36.199 221 133 6 338 553 214 431 1.53e-26 114
Msa0009890 MtrunA17_Chr6g0459551 35.678 199 119 7 318 513 84 276 1.10e-24 107
Msa0009890 MtrunA17_Chr2g0289231 30.888 259 157 6 298 545 268 515 3.71e-23 104
Msa0009890 MtrunA17_Chr4g0047411 33.493 209 121 5 361 552 202 409 1.77e-21 99.8
Msa0009890 MtrunA17_Chr5g0432681 47.000 100 40 3 645 731 1 100 2.06e-15 75.1
Msa0009890 MtrunA17_Chr8g0392971 38.144 97 59 1 541 636 51 147 5.52e-14 70.1
Msa0009890 MtrunA17_Chr4g0039781 28.761 226 126 8 373 570 370 588 6.36e-12 68.9
Msa0009890 MtrunA17_Chr4g0062081 41.558 77 43 2 340 414 11 87 3.93e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0009890 AT5G53170.1 73.123 759 152 7 42 755 55 806 0.0 1057
Msa0009890 AT2G26140.1 50.322 622 222 10 177 744 80 668 0.0 571
Msa0009890 AT5G15250.1 48.107 449 183 3 337 736 222 669 4.33e-131 405
Msa0009890 AT1G06430.1 48.214 448 183 4 337 736 218 664 4.57e-126 392
Msa0009890 AT1G06430.3 48.214 448 183 4 337 736 218 664 4.57e-126 392
Msa0009890 AT1G06430.2 48.214 448 183 4 337 736 218 664 4.57e-126 392
Msa0009890 AT2G30950.4 47.991 448 184 4 337 736 229 675 8.67e-125 389
Msa0009890 AT2G30950.1 47.991 448 184 4 337 736 225 671 1.16e-124 389
Msa0009890 AT2G30950.2 47.991 448 184 4 337 736 225 671 1.16e-124 389
Msa0009890 AT2G30950.3 47.991 448 184 4 337 736 225 671 1.16e-124 389
Msa0009890 AT5G42270.1 47.033 455 188 5 330 732 242 695 4.43e-123 385
Msa0009890 AT1G50250.1 46.374 455 191 4 330 732 254 707 9.37e-123 384
Msa0009890 AT1G07510.1 42.105 456 208 11 333 738 321 770 8.04e-103 334
Msa0009890 AT2G29080.1 43.304 448 199 9 333 731 316 757 2.34e-102 333
Msa0009890 AT3G47060.1 48.641 368 167 10 337 687 323 685 8.11e-95 313
Msa0009890 AT5G58870.1 47.956 367 171 9 337 687 327 689 1.96e-94 312
Msa0009890 AT5G15250.2 54.422 294 106 4 337 603 222 514 4.50e-94 303
Msa0009890 AT4G23940.1 43.935 371 184 8 338 687 429 796 1.82e-79 274
Msa0009890 AT3G16290.1 37.358 439 233 6 338 738 409 843 7.36e-77 266
Msa0009890 AT3G02450.1 51.210 248 118 2 338 582 333 580 2.10e-71 245
Msa0009890 AT5G64580.1 32.768 531 285 15 266 727 221 748 9.64e-59 214
Msa0009890 AT3G05530.1 44.495 218 116 2 332 544 164 381 4.10e-50 182
Msa0009890 AT1G79560.1 30.909 385 218 8 338 688 492 862 6.71e-50 189
Msa0009890 AT1G79560.3 30.909 385 218 7 338 688 492 862 7.24e-50 189
Msa0009890 AT1G79560.2 30.909 385 218 8 338 688 492 862 7.39e-50 189
Msa0009890 AT1G45000.1 43.556 225 120 3 337 555 137 360 6.03e-49 177
Msa0009890 AT3G53230.1 39.676 247 143 3 321 562 464 709 1.58e-48 184
Msa0009890 AT3G53230.1 41.704 223 128 2 338 558 207 429 1.07e-43 170
Msa0009890 AT5G19990.2 38.976 254 149 2 337 584 101 354 2.33e-48 175
Msa0009890 AT5G43010.1 42.667 225 122 3 337 555 137 360 5.44e-48 175
Msa0009890 AT1G53780.3 37.354 257 152 4 332 581 332 586 5.84e-48 179
Msa0009890 AT1G53780.1 37.354 257 152 4 332 581 333 587 6.28e-48 179
Msa0009890 AT1G53780.4 37.354 257 152 4 332 581 333 587 6.28e-48 179
Msa0009890 AT1G53780.2 37.354 257 152 4 332 581 354 608 6.98e-48 180
Msa0009890 AT5G20000.1 38.976 254 149 2 337 584 159 412 7.51e-48 175
Msa0009890 AT5G19990.1 38.976 254 149 2 337 584 159 412 7.66e-48 175
Msa0009890 AT5G19990.3 38.976 254 149 2 337 584 159 412 7.66e-48 175
Msa0009890 AT1G09100.1 43.119 218 119 2 332 544 163 380 9.05e-48 175
Msa0009890 AT5G03340.1 39.676 247 143 3 321 562 463 708 1.26e-47 181
Msa0009890 AT5G03340.1 42.152 223 127 2 338 558 206 428 3.90e-44 171
Msa0009890 AT1G53750.1 32.249 338 218 5 253 581 80 415 2.80e-47 174
Msa0009890 AT3G09840.1 39.919 248 142 3 321 562 463 709 2.02e-46 178
Msa0009890 AT3G09840.1 42.152 223 127 2 338 558 206 428 3.20e-44 171
Msa0009890 AT3G56690.1 41.423 239 136 3 327 561 712 950 6.05e-45 174
Msa0009890 AT3G56690.1 35.610 205 130 2 351 553 397 601 4.08e-33 137
Msa0009890 AT5G58290.1 35.587 281 165 4 282 555 105 376 1.75e-44 165
Msa0009890 AT4G29040.1 36.000 250 151 3 335 577 184 431 1.49e-43 164
Msa0009890 AT2G20140.1 36.694 248 152 2 335 577 184 431 1.66e-43 164
Msa0009890 AT3G01610.2 43.534 232 117 4 337 555 231 461 2.52e-40 159
Msa0009890 AT3G01610.2 41.071 224 128 4 338 558 527 749 6.30e-36 146
Msa0009890 AT3G01610.1 43.534 232 117 4 337 555 231 461 2.98e-40 159
Msa0009890 AT3G01610.1 41.071 224 128 4 338 558 527 749 6.75e-36 145
Msa0009890 AT2G03670.1 40.870 230 130 2 325 548 272 501 8.24e-40 156
Msa0009890 AT2G03670.1 31.579 247 161 3 340 578 23 269 2.87e-27 117
Msa0009890 AT1G64110.2 39.754 244 135 7 323 558 504 743 4.07e-37 149
Msa0009890 AT1G64110.4 39.754 244 135 7 323 558 504 743 4.07e-37 149
Msa0009890 AT1G64110.5 39.754 244 135 7 323 558 502 741 4.35e-37 149
Msa0009890 AT1G64110.3 39.754 244 135 7 323 558 502 741 4.35e-37 149
Msa0009890 AT1G64110.1 39.754 244 135 7 323 558 499 738 4.39e-37 149
Msa0009890 AT5G08470.3 37.611 226 133 3 338 558 834 1056 2.26e-36 148
Msa0009890 AT5G08470.1 37.611 226 133 3 338 558 843 1065 2.65e-36 147
Msa0009890 AT3G15120.2 39.224 232 131 5 333 555 723 953 4.62e-36 147
Msa0009890 AT3G15120.1 39.224 232 131 5 333 555 713 943 4.99e-36 147
Msa0009890 AT4G28000.3 38.525 244 137 8 323 558 503 741 1.12e-35 145
Msa0009890 AT4G28000.1 38.525 244 137 8 323 558 501 739 1.18e-35 145
Msa0009890 AT4G28000.2 38.525 244 137 8 323 558 503 741 1.19e-35 145
Msa0009890 AT2G27600.1 38.362 232 129 8 325 548 118 343 5.87e-35 139
Msa0009890 AT3G04340.1 27.565 497 255 14 338 731 783 1277 1.48e-34 142
Msa0009890 AT1G05910.1 33.013 312 187 8 295 597 348 646 6.96e-34 140
Msa0009890 AT5G52882.1 38.115 244 138 8 323 558 500 738 9.33e-34 139
Msa0009890 AT1G03000.1 34.934 229 142 5 334 556 654 881 2.06e-33 138
Msa0009890 AT1G80350.1 35.379 277 157 8 295 553 189 461 3.35e-33 135
Msa0009890 AT4G02480.1 37.657 239 136 7 323 552 946 1180 6.28e-33 137
Msa0009890 AT1G02890.1 37.238 239 137 7 323 552 927 1161 7.73e-33 137
Msa0009890 AT2G34560.1 36.842 228 132 7 334 554 99 321 3.08e-32 129
Msa0009890 AT2G34560.2 36.842 228 132 7 334 554 108 330 3.93e-32 129
Msa0009890 AT2G45500.4 38.298 235 132 8 338 564 82 311 4.93e-32 128
Msa0009890 AT2G45500.3 38.298 235 132 8 338 564 82 311 4.93e-32 128
Msa0009890 AT3G27120.1 36.864 236 138 7 325 553 389 620 5.62e-32 133
Msa0009890 AT2G45500.2 38.298 235 132 8 338 564 215 444 4.17e-31 128
Msa0009890 AT2G45500.5 38.298 235 132 8 338 564 225 454 4.48e-31 128
Msa0009890 AT2G45500.1 38.298 235 132 8 338 564 219 448 4.62e-31 128
Msa0009890 AT1G50140.2 37.004 227 135 5 338 558 691 915 1.82e-30 129
Msa0009890 AT1G50140.5 37.004 227 135 5 338 558 691 915 1.82e-30 129
Msa0009890 AT1G50140.3 37.004 227 135 5 338 558 713 937 2.09e-30 129
Msa0009890 AT1G50140.1 37.004 227 135 5 338 558 713 937 2.09e-30 129
Msa0009890 AT1G50140.4 37.004 227 135 5 338 558 713 937 2.09e-30 129
Msa0009890 AT4G24860.3 35.366 246 147 6 325 562 804 1045 4.59e-30 128
Msa0009890 AT4G24860.1 35.366 246 147 6 325 562 806 1047 4.80e-30 128
Msa0009890 AT4G24860.2 35.366 246 147 6 325 562 802 1043 5.36e-30 128
Msa0009890 AT4G24860.4 35.366 246 147 6 325 562 779 1020 5.95e-30 127
Msa0009890 AT3G19740.1 36.564 227 136 5 338 558 703 927 3.72e-29 125
Msa0009890 AT2G03670.2 31.579 247 161 3 340 578 23 269 4.68e-28 118
Msa0009890 AT2G03670.2 38.816 152 87 2 325 470 272 423 1.95e-18 89.0
Msa0009890 AT5G53540.1 32.246 276 161 10 338 595 86 353 1.18e-26 113
Msa0009890 AT1G45000.2 44.286 140 71 3 337 470 137 275 1.46e-26 112
Msa0009890 AT1G62130.1 34.553 246 139 8 324 562 738 968 2.18e-26 116
Msa0009890 AT1G62130.2 34.553 246 139 8 324 562 731 961 2.53e-26 116
Msa0009890 AT4G04180.1 32.927 246 134 9 337 568 317 545 4.75e-26 114
Msa0009890 AT4G04180.2 32.927 246 134 9 337 568 312 540 4.75e-26 114
Msa0009890 AT4G27680.1 35.586 222 132 6 338 552 83 300 3.04e-25 109
Msa0009890 AT4G04910.1 34.615 208 118 5 361 551 239 445 3.24e-21 99.4
Msa0009890 AT1G02890.2 33.617 235 123 7 323 552 927 1133 2.61e-20 97.1
Msa0009890 AT5G08470.2 34.459 148 89 3 338 480 843 987 1.56e-18 91.3

Find 217 sgRNAs with CRISPR-Local

Find 647 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCAAAAGACCGAATAATTA+TGG 0.162907 1_1:-14737024 Msa0009890:CDS
CTGTACGTCTGTCAGGTTTA+TGG 0.212295 1_1:-14740702 Msa0009890:intron
TGTGAAAGCTCTTCTGAAAA+AGG 0.225750 1_1:-14734985 Msa0009890:intron
ACTTCCTTGTTTAGCTCCTT+TGG 0.240049 1_1:+14740599 None:intergenic
CTTCCTTGTTTAGCTCCTTT+GGG 0.240432 1_1:+14740600 None:intergenic
TGTATTACTGTACTAATTAT+AGG 0.249409 1_1:-14734596 Msa0009890:three_prime_UTR
TCTTATCATAAGATGATTAT+AGG 0.256040 1_1:-14734494 Msa0009890:three_prime_UTR
TGCTTTAATATCTACATTAT+CGG 0.257297 1_1:+14737275 None:intergenic
TCTTCTTGTTCCTGTTGTTC+TGG 0.277378 1_1:+14734664 None:intergenic
GAGGAATCTGGAAAACCTTC+TGG 0.290339 1_1:-14742336 Msa0009890:CDS
CTGTTCATGCTCAGGTTTGT+TGG 0.298475 1_1:-14738056 Msa0009890:intron
TCGGAGATAGGTTCGGGATT+AGG 0.299455 1_1:+14744037 None:intergenic
CAGTTGAATTTAACGGTTCT+AGG 0.302745 1_1:+14744002 None:intergenic
TTGGGTGGGATTGGTTCTTC+AGG 0.312707 1_1:-14740647 Msa0009890:CDS
TTGGAGGCAGGAGAAGAAAT+TGG 0.328754 1_1:-14743777 Msa0009890:CDS
TGTACGTCTGTCAGGTTTAT+GGG 0.331741 1_1:-14740701 Msa0009890:intron
TGGTTGATTGGTGGCCGTTT+TGG 0.339106 1_1:-14743796 Msa0009890:CDS
GTTGCAGAAGAACTTATCTT+TGG 0.341319 1_1:-14735579 Msa0009890:CDS
TACGACGGCGCCAATTTCAT+TGG 0.341590 1_1:-14744305 Msa0009890:five_prime_UTR
CGACCACGTACATCTGGATT+TGG 0.346610 1_1:+14737339 None:intergenic
GTATTACTGTACTAATTATA+GGG 0.346984 1_1:-14734595 Msa0009890:three_prime_UTR
GTAACCTTATCCAATGAAAT+TGG 0.349461 1_1:+14744295 None:intergenic
GATGTGCACCGTCGGTATTA+AGG 0.351938 1_1:+14735733 None:intergenic
ATGCCCCGTGGATCTGCTTT+AGG 0.353616 1_1:-14735690 Msa0009890:CDS
TTTCAGGGGATTCTTCTGAC+TGG 0.361761 1_1:-14739504 Msa0009890:intron
AGCTCGTCTTGATGTTTGTA+TGG 0.361815 1_1:-14735610 Msa0009890:CDS
ATTCTTCTGACTGGGGCACC+TGG 0.362651 1_1:-14739495 Msa0009890:CDS
GCAGCCGTTGCACGTGGTTA+TGG 0.373039 1_1:-14741082 Msa0009890:intron
TATCTTCCTGATGAGGAATC+TGG 0.373257 1_1:-14742348 Msa0009890:CDS
GCTCTGTACCCATAATTATT+CGG 0.373668 1_1:+14737015 None:intergenic
GCAAAAGACCGAATAATTAT+GGG 0.375666 1_1:-14737023 Msa0009890:CDS
TTCAGGGGATTCTTCTGACT+GGG 0.379915 1_1:-14739503 Msa0009890:intron
AGTAGAACGAACTCAAACTA+TGG 0.380268 1_1:-14744233 Msa0009890:exon
GCTGTAGGGAATAATATTAA+TGG 0.382293 1_1:-14737674 Msa0009890:intron
CACGATCATATGCATCTCTA+AGG 0.382357 1_1:+14735006 None:intergenic
GAATTTAACGGTTCTAGGTT+AGG 0.386512 1_1:+14744007 None:intergenic
ACGTGGTCGGCAAGAAATAT+TGG 0.387425 1_1:-14737325 Msa0009890:CDS
CTGACTGGGGCACCTGGAAC+TGG 0.388772 1_1:-14739489 Msa0009890:CDS
TTAAGAAGAGTAGAGGGGTT+AGG 0.394457 1_1:+14744157 None:intergenic
ATGATTGTTGCCTTGTGAAT+TGG 0.395594 1_1:+14735711 None:intergenic
GGCTGCTTCTCAGATATTCC+AGG 0.398346 1_1:+14741099 None:intergenic
GCACCAACTTCTTGTTGAAA+TGG 0.405004 1_1:-14737785 Msa0009890:CDS
GAGTAGAGGGGTTAGGAATG+AGG 0.406531 1_1:+14744164 None:intergenic
CAACTTCTTGTTGAAATGGA+TGG 0.407414 1_1:-14737781 Msa0009890:CDS
GGCGCCAATTTCATTGGATA+AGG 0.409282 1_1:-14744299 Msa0009890:five_prime_UTR
ATGCTCAGGTTTGTTGGAGT+TGG 0.412642 1_1:-14738050 Msa0009890:intron
CGTGGTACCCCAGGATTCAA+TGG 0.413046 1_1:-14737246 Msa0009890:CDS
CCGTAGCTGTTGGATTGGTC+TGG 0.413106 1_1:-14740808 Msa0009890:intron
TCTTGCCGACCACGTACATC+TGG 0.413497 1_1:+14737333 None:intergenic
GGGATTGGTTCTTCAGGTGT+TGG 0.413971 1_1:-14740641 Msa0009890:CDS
CCAGCTAAATTTACTCGCCT+TGG 0.415935 1_1:-14739933 Msa0009890:CDS
AAGTTGGTGCAATGTCTTCT+TGG 0.418332 1_1:+14737798 None:intergenic
AGGGGTTAGGAATGAGGAAT+GGG 0.419576 1_1:+14744170 None:intergenic
AGAGCTGGATCAAGAATATC+AGG 0.419594 1_1:+14737637 None:intergenic
GAGTTGAAACAGCGGGCATC+TGG 0.423089 1_1:-14741147 Msa0009890:CDS
CACCTGCCCCATTGAATCCT+GGG 0.423171 1_1:+14737238 None:intergenic
TCGTGCCGGTTCGGAATTTG+AGG 0.426524 1_1:-14739206 Msa0009890:CDS
ATCGGAAGCTTGGGTGGGAT+TGG 0.428528 1_1:-14740656 Msa0009890:CDS
TATTGATGTCTCATCATTTG+AGG 0.429070 1_1:+14735650 None:intergenic
ATGTGCACCGTCGGTATTAA+GGG 0.434842 1_1:+14735734 None:intergenic
TCACCTGCCCCATTGAATCC+TGG 0.435358 1_1:+14737237 None:intergenic
GCTATTAAAGCTGCGGTTGA+AGG 0.440549 1_1:-14737080 Msa0009890:CDS
GGGACCTTGAAGGCTATTGC+TGG 0.440814 1_1:-14739253 Msa0009890:intron
ACGATTACTTCTCCCGTATC+GGG 0.444184 1_1:-14734698 Msa0009890:CDS
GAGTGAAGGGAACGCGCGGG+TGG 0.445306 1_1:+14744107 None:intergenic
AGTGCAGAGAAGGGGAGTGA+AGG 0.448276 1_1:+14744093 None:intergenic
ATGAAGAGAAGGTGGAGAGT+GGG 0.449965 1_1:-14743910 Msa0009890:CDS
TTAGGAGAATCGTCGGAGAT+AGG 0.451508 1_1:+14744025 None:intergenic
TGAGGTTTAAGAAGAGTAGA+GGG 0.454074 1_1:+14744151 None:intergenic
AGGAAAACTTCCAGAACAAC+AGG 0.454950 1_1:-14734674 Msa0009890:CDS
GGTCGGGATAATGTCACAAC+TGG 0.455133 1_1:-14735558 Msa0009890:CDS
TGAAGGGAACGCGCGGGTGG+AGG 0.460103 1_1:+14744110 None:intergenic
CCAAGGCGAGTAAATTTAGC+TGG 0.460716 1_1:+14739933 None:intergenic
GTGGTACCCCAGGATTCAAT+GGG 0.461743 1_1:-14737245 Msa0009890:CDS
GTTTACCGTAGCTGTTGGAT+TGG 0.462751 1_1:-14740813 Msa0009890:CDS
AACTTCTTGTTGAAATGGAT+GGG 0.469351 1_1:-14737780 Msa0009890:CDS
GGACCTTTGTCATCGTTAGC+AGG 0.472984 1_1:+14734431 None:intergenic
GTGCTGTAGTATTCTAATAG+TGG 0.473458 1_1:+14734410 None:intergenic
GAATCGTCGGAGATAGGTTC+GGG 0.475079 1_1:+14744031 None:intergenic
GACGATTACTTCTCCCGTAT+CGG 0.475761 1_1:-14734699 Msa0009890:CDS
GCTAAATTTACTCGCCTTGG+AGG 0.476125 1_1:-14739930 Msa0009890:CDS
TTACTGAGGCCGATGCGAAT+CGG 0.479188 1_1:-14743745 Msa0009890:CDS
ACCTTCTGGAATTCCCTCCT+TGG 0.479898 1_1:-14742322 Msa0009890:intron
ATTGATGTCTCATCATTTGA+GGG 0.480191 1_1:+14735651 None:intergenic
AACGCGCGGGTGGAGGCGCG+TGG 0.482203 1_1:+14744117 None:intergenic
AGAATCGTCGGAGATAGGTT+CGG 0.482753 1_1:+14744030 None:intergenic
CGGCTGTAGGTTTATCATGC+AGG 0.484405 1_1:+14737295 None:intergenic
TGATAAAGATATTTGAAGAA+AGG 0.484840 1_1:-14742443 Msa0009890:CDS
GCAAGAACTTGAGGAGGTTG+TGG 0.486955 1_1:-14739970 Msa0009890:CDS
TTTCGGAATTGGTTGATTGG+TGG 0.487125 1_1:-14743805 Msa0009890:CDS
CATCTCCTCAAATTCCGAAC+CGG 0.488253 1_1:+14739201 None:intergenic
TACACTAGATCTGGCAAACC+TGG 0.489864 1_1:-14737114 Msa0009890:intron
GAGAGTGGGGAAAAGAAAGA+TGG 0.490945 1_1:-14743896 Msa0009890:CDS
CAGAAGAACTTATCTTTGGT+CGG 0.491737 1_1:-14735575 Msa0009890:CDS
ATTGATGAAATTGATGCCGT+TGG 0.494452 1_1:-14737850 Msa0009890:CDS
AGAAGAACTTATCTTTGGTC+GGG 0.494681 1_1:-14735574 Msa0009890:CDS
CAAGGAAGTGATGCCAGAAA+AGG 0.496681 1_1:-14740585 Msa0009890:intron
GGTTTGTTGGAGTTGGTGCT+CGG 0.497437 1_1:-14738043 Msa0009890:CDS
GTGCAGAGAAGGGGAGTGAA+GGG 0.498083 1_1:+14744094 None:intergenic
GAGGGGTTAGGAATGAGGAA+TGG 0.499225 1_1:+14744169 None:intergenic
AGCAGAAGGGGATCTTGTAT+TGG 0.499724 1_1:-14734641 Msa0009890:CDS
TTCGGGATTAGGTTCGGAGT+GGG 0.500209 1_1:+14744048 None:intergenic
GATAAAGATATTTGAAGAAA+GGG 0.501718 1_1:-14742442 Msa0009890:CDS
AGATGGGAGATTACCGATAG+TGG 0.503474 1_1:-14743879 Msa0009890:CDS
CATCCATTTCAACAAGAAGT+TGG 0.504444 1_1:+14737782 None:intergenic
ATGAGGTTTAAGAAGAGTAG+AGG 0.505014 1_1:+14744150 None:intergenic
TTCCTTGTTTAGCTCCTTTG+GGG 0.505068 1_1:+14740601 None:intergenic
CGGGTTGAAAAGTGCAGAGA+AGG 0.506860 1_1:+14744083 None:intergenic
GAAATTAACAGCTTCTCAGT+TGG 0.510238 1_1:-14737051 Msa0009890:CDS
GATAGGTTCGGGATTAGGTT+CGG 0.513792 1_1:+14744042 None:intergenic
TACCGAGCTTGCGCAATACA+TGG 0.515301 1_1:-14735511 Msa0009890:intron
AGAGTGGGGAAAAGAAAGAT+GGG 0.515765 1_1:-14743895 Msa0009890:CDS
GCTCGTCTTGATGTTTGTAT+GGG 0.515952 1_1:-14735609 Msa0009890:CDS
TTCTTCTCCTGCCTCCAAAA+CGG 0.516546 1_1:+14743782 None:intergenic
ACCCCAGGATTCAATGGGGC+AGG 0.516888 1_1:-14737240 Msa0009890:intron
ATGAGGAATGGGAAGAGAAG+AGG 0.517503 1_1:+14744181 None:intergenic
TTGTTGAGCTTAATAAGCAC+AGG 0.518276 1_1:-14743694 Msa0009890:intron
CTACCAGGTCTCGTTAGAGC+TGG 0.519457 1_1:+14737622 None:intergenic
TGAAGAGAAGGTGGAGAGTG+GGG 0.524186 1_1:-14743909 Msa0009890:CDS
GGAGTGGGGAAGTGTAGTAT+CGG 0.524882 1_1:+14744063 None:intergenic
CCGTGGATCTGCTTTAGGAA+TGG 0.526051 1_1:-14735685 Msa0009890:CDS
AAGGCTATTGCTGGAGAAGC+CGG 0.527024 1_1:-14739244 Msa0009890:CDS
GCAATAGCCCGTGGTACCCC+AGG 0.527714 1_1:-14737255 Msa0009890:CDS
TAACCTTGCTAAGAGACACT+TGG 0.529492 1_1:+14734240 None:intergenic
TATTAAAATGAAGAATACAT+AGG 0.530822 1_1:+14734301 None:intergenic
CCTTTGGCAGCTTTCCTCCA+AGG 0.531093 1_1:+14739916 None:intergenic
CATTGAATCCTGGGGTACCA+CGG 0.536347 1_1:+14737247 None:intergenic
GATAAGAATTGCATGGGCTA+AGG 0.537144 1_1:+14734510 None:intergenic
AAGAATTGCATGGGCTAAGG+AGG 0.537451 1_1:+14734513 None:intergenic
TAATAGCAGCAATGTTCACC+AGG 0.538384 1_1:+14737096 None:intergenic
TGTACAGTATAAATTCCTAC+AGG 0.539689 1_1:-14734565 Msa0009890:three_prime_UTR
TTTGCTACACAGATATTCAA+AGG 0.539756 1_1:+14734458 None:intergenic
ATTGAATCCTGGGGTACCAC+GGG 0.540112 1_1:+14737248 None:intergenic
ATCTTATGATAAGAATTGCA+TGG 0.542431 1_1:+14734503 None:intergenic
AAATACATCGGAAGCTTGGG+TGG 0.543361 1_1:-14740662 Msa0009890:CDS
TACCATGTATTGCGCAAGCT+CGG 0.544845 1_1:+14735509 None:intergenic
CTTTGGGTGAGAGCGAAAGA+AGG 0.545221 1_1:-14743842 Msa0009890:CDS
AATATCTTTATCACAGACTC+AGG 0.545857 1_1:+14742453 None:intergenic
GATGAAGAGAAGGTGGAGAG+TGG 0.547117 1_1:-14743911 Msa0009890:CDS
CGTCTTGATGTTTGTATGGG+AGG 0.550296 1_1:-14735606 Msa0009890:CDS
CAGGAACAAGAAGAAGCAGA+AGG 0.551151 1_1:-14734655 Msa0009890:CDS
CATTCCTAAAGCAGATCCAC+GGG 0.552648 1_1:+14735686 None:intergenic
GTTGCAAGAGTTGAAACAGC+GGG 0.557627 1_1:-14741154 Msa0009890:CDS
ACGCGCGGGTGGAGGCGCGT+GGG 0.560316 1_1:+14744118 None:intergenic
TCAGGGGATTCTTCTGACTG+GGG 0.564763 1_1:-14739502 Msa0009890:intron
ATATCTACATTATCGGCTGT+AGG 0.564889 1_1:+14737282 None:intergenic
AATTGGCGCCGTCGTACATG+TGG 0.566322 1_1:+14744312 None:intergenic
GAGTGGGGAAGTGTAGTATC+GGG 0.566611 1_1:+14744064 None:intergenic
GGGTTGAAAAGTGCAGAGAA+GGG 0.566719 1_1:+14744084 None:intergenic
GGAACAAGAAGAAGCAGAAG+GGG 0.569059 1_1:-14734653 Msa0009890:CDS
AGGAACAAGAAGAAGCAGAA+GGG 0.570827 1_1:-14734654 Msa0009890:CDS
TTTACCATAACCACGTGCAA+CGG 0.572472 1_1:+14741078 None:intergenic
AAGTGTTGATGAAGAGAAGG+TGG 0.574549 1_1:-14743918 Msa0009890:CDS
CTGTTTCCTAGTTGATCCAA+CGG 0.575192 1_1:+14737834 None:intergenic
GGATGGGTTTGAGCAGAATG+AGG 0.575670 1_1:-14737764 Msa0009890:intron
AACCTTGCTAAGAGACACTT+GGG 0.575927 1_1:+14734241 None:intergenic
CGCGTGGGATTGAAGTGATG+AGG 0.576028 1_1:+14744133 None:intergenic
ACCAAGGAGGGAATTCCAGA+AGG 0.577989 1_1:+14742321 None:intergenic
GAGGTTTAAGAAGAGTAGAG+GGG 0.578192 1_1:+14744152 None:intergenic
GACCCAAGTGTCTCTTAGCA+AGG 0.579015 1_1:-14734243 Msa0009890:three_prime_UTR
TCTTATGATAAGAATTGCAT+GGG 0.579510 1_1:+14734504 None:intergenic
AGCGAAAGAAGGATTGAAGA+GGG 0.579753 1_1:-14743831 Msa0009890:CDS
TTACTTCTCCCGTATCGGGA+AGG 0.581959 1_1:-14734694 Msa0009890:CDS
AGGGGAGTGAAGGGAACGCG+CGG 0.583037 1_1:+14744103 None:intergenic
TGAGGCCGATGCGAATCGGT+TGG 0.585106 1_1:-14743741 Msa0009890:CDS
GGGGAGTGAAGGGAACGCGC+GGG 0.588088 1_1:+14744104 None:intergenic
TGAAAGTGTTGATGAAGAGA+AGG 0.588112 1_1:-14743921 Msa0009890:CDS
AAAACATGAATTACCAAGGA+GGG 0.590298 1_1:+14742309 None:intergenic
GAATACTACAGCACTTGCTG+AGG 0.594415 1_1:-14734401 Msa0009890:three_prime_UTR
GACAGAGCTGTGGACAGTAG+AGG 0.595203 1_1:-14742420 Msa0009890:CDS
TTCTAGGTTAGGAGAATCGT+CGG 0.595504 1_1:+14744018 None:intergenic
CCTTGGAGGAAAGCTGCCAA+AGG 0.602817 1_1:-14739916 Msa0009890:intron
TGCAGAATATCTTCCTGATG+AGG 0.603402 1_1:-14742355 Msa0009890:CDS
CCATTCCTAAAGCAGATCCA+CGG 0.603684 1_1:+14735685 None:intergenic
AGCATCCAACCGATTCGCAT+CGG 0.603784 1_1:+14743736 None:intergenic
TCGGGATTAGGTTCGGAGTG+GGG 0.606691 1_1:+14744049 None:intergenic
TATTAAGGGCAACAATTGCA+TGG 0.607650 1_1:+14735748 None:intergenic
AGAATATCTTCGAGCACTAG+TGG 0.608927 1_1:-14742391 Msa0009890:CDS
GGTGCAATGTCTTCTTGGTG+TGG 0.614778 1_1:+14737803 None:intergenic
ATTGTTGCCCTTAATACCGA+CGG 0.614887 1_1:-14735741 Msa0009890:CDS
TGATGCAAAGCAAGAACTTG+AGG 0.615992 1_1:-14739979 Msa0009890:CDS
GCTGCTTCTCAGATATTCCA+GGG 0.618273 1_1:+14741100 None:intergenic
AAGTTCATCTTATACCCCAA+AGG 0.619333 1_1:-14740615 Msa0009890:CDS
GAGCGAAAGAAGGATTGAAG+AGG 0.620742 1_1:-14743832 Msa0009890:CDS
CGGTGCACATCCAATTCACA+AGG 0.623940 1_1:-14735721 Msa0009890:CDS
GATCCAGCTCTAACGAGACC+TGG 0.626768 1_1:-14737625 Msa0009890:CDS
CCAGACCAATCCAACAGCTA+CGG 0.628119 1_1:+14740808 None:intergenic
CATTGCTGCTATTAAAGCTG+CGG 0.632069 1_1:-14737087 Msa0009890:CDS
TACCCCAAAGGAGCTAAACA+AGG 0.634360 1_1:-14740603 Msa0009890:CDS
ACATGTCGATCAAATCTACC+AGG 0.635247 1_1:+14737607 None:intergenic
TATTACTGTACTAATTATAG+GGG 0.638093 1_1:-14734594 Msa0009890:three_prime_UTR
GGTTGAAAAGTGCAGAGAAG+GGG 0.641080 1_1:+14744085 None:intergenic
AATACATCGGAAGCTTGGGT+GGG 0.641750 1_1:-14740661 Msa0009890:CDS
TGAAGAAAGGGACAGAGCTG+TGG 0.642216 1_1:-14742430 Msa0009890:CDS
TCATCAATGAAAATAATGCA+AGG 0.645297 1_1:+14737865 None:intergenic
TGGATCAACTAGGAAACAGT+GGG 0.648027 1_1:-14737830 Msa0009890:CDS
TGAGAAGCAGCCGTTGCACG+TGG 0.648811 1_1:-14741088 Msa0009890:CDS
AGAATTGCATGGGCTAAGGA+GGG 0.648945 1_1:+14734514 None:intergenic
GTGAATTGGATGTGCACCGT+CGG 0.649686 1_1:+14735725 None:intergenic
AATACTACAGCACTTGCTGA+GGG 0.653077 1_1:-14734400 Msa0009890:three_prime_UTR
ACCTGCCCCATTGAATCCTG+GGG 0.654030 1_1:+14737239 None:intergenic
CAAATCCAGATGTACGTGGT+CGG 0.656095 1_1:-14737338 Msa0009890:CDS
GATATTAAAGCAATAGCCCG+TGG 0.657393 1_1:-14737264 Msa0009890:CDS
AATCCTGCTAACGATGACAA+AGG 0.657812 1_1:-14734434 Msa0009890:three_prime_UTR
TTGGATCAACTAGGAAACAG+TGG 0.663653 1_1:-14737831 Msa0009890:CDS
TGCAAAGCAAGAACTTGAGG+AGG 0.665232 1_1:-14739976 Msa0009890:CDS
TCAACTAGGAAACAGTGGGA+GGG 0.665391 1_1:-14737826 Msa0009890:CDS
ATCAACTAGGAAACAGTGGG+AGG 0.670980 1_1:-14737827 Msa0009890:CDS
GTTCGGGATTAGGTTCGGAG+TGG 0.678284 1_1:+14744047 None:intergenic
TTGATGCCGTTGGATCAACT+AGG 0.681667 1_1:-14737840 Msa0009890:CDS
CTTACTGCTTATCATGAGAG+CGG 0.684706 1_1:-14735771 Msa0009890:CDS
ATTGGCGAAGTTGATTACTG+AGG 0.692137 1_1:-14743759 Msa0009890:CDS
GTACCAAATCCAGATGTACG+TGG 0.724171 1_1:-14737342 Msa0009890:CDS
AGTTGCAAGAGTTGAAACAG+CGG 0.728453 1_1:-14741155 Msa0009890:CDS
AAGGCAACAATCATGCCCCG+TGG 0.731484 1_1:-14735702 Msa0009890:CDS
ATTCCTAAAGCAGATCCACG+GGG 0.770989 1_1:+14735687 None:intergenic
TGGTACCCCAGGATTCAATG+GGG 0.791131 1_1:-14737244 Msa0009890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATCAAAAAAATTTGTATA+AGG + chr1_1:14737122-14737141 None:intergenic 10.0%
!! AATTATGATTATATAATACA+TGG + chr1_1:14738482-14738501 None:intergenic 10.0%
!! TTAAATAAAGTTTAATATGT+TGG - chr1_1:14740441-14740460 Msa0009890:intron 10.0%
!!! ATTTTTAGTATTTTAATGTT+AGG + chr1_1:14741847-14741866 None:intergenic 10.0%
!! ACATTATATAAAAAAAAGAT+TGG + chr1_1:14741935-14741954 None:intergenic 10.0%
!!! TATATTTTTTGTTATATTGT+TGG + chr1_1:14742123-14742142 None:intergenic 10.0%
!!! CAAATATTTTATCAATTTTT+TGG - chr1_1:14742640-14742659 Msa0009890:intron 10.0%
!!! TTTTTAGACAAATATTTTAT+TGG - chr1_1:14744198-14744217 Msa0009890:CDS 10.0%
!!! TATTATTCATAAGTTTGTTA+AGG - chr1_1:14735102-14735121 Msa0009890:intron 15.0%
!! GACAAAAAAAAAAAAAAGAT+TGG - chr1_1:14735325-14735344 Msa0009890:intron 15.0%
!! AAAAAAAAAAAAAAGATTGG+AGG - chr1_1:14735328-14735347 Msa0009890:intron 15.0%
!!! TTGTTGTTATAAATGTTTTT+AGG - chr1_1:14735487-14735506 Msa0009890:intron 15.0%
!! TATAGGAAAAGATAAAATAA+AGG - chr1_1:14735715-14735734 Msa0009890:CDS 15.0%
!! CATGTAAAATAGTTTATTAA+AGG + chr1_1:14735910-14735929 None:intergenic 15.0%
!!! ATGAACATAATAGTTATTTT+CGG - chr1_1:14735998-14736017 Msa0009890:intron 15.0%
!! AAAAAATTAGAAAAAAGTCA+AGG + chr1_1:14736604-14736623 None:intergenic 15.0%
!! AATAATCAAACAATAGAATT+GGG + chr1_1:14737622-14737641 None:intergenic 15.0%
!! AAATGTAGTAAGTATTATAT+TGG + chr1_1:14738283-14738302 None:intergenic 15.0%
!!! AATAATTCATTTGATAGTAT+TGG + chr1_1:14738389-14738408 None:intergenic 15.0%
!! ATAATAATAATGAAGTTCAA+TGG + chr1_1:14739252-14739271 None:intergenic 15.0%
!! AAGGAAAATTAAAAAAACAT+AGG - chr1_1:14741075-14741094 Msa0009890:intron 15.0%
!! TATATTATATACACATTAAC+CGG + chr1_1:14741145-14741164 None:intergenic 15.0%
!! TAATGTGTATATAATATAGA+TGG - chr1_1:14741147-14741166 Msa0009890:CDS 15.0%
!! TAACATTTGAAAATTATGAA+CGG - chr1_1:14741987-14742006 Msa0009890:intron 15.0%
!!! TTACACTTTTTAAATGATAA+AGG - chr1_1:14742255-14742274 Msa0009890:intron 15.0%
!! TTATTTGTATTGAAAATTGA+GGG - chr1_1:14742387-14742406 Msa0009890:CDS 15.0%
!! TATAGATGAAAATAGAAAAT+TGG - chr1_1:14742472-14742491 Msa0009890:intron 15.0%
!! AATAAAATAGACACAAAAAA+TGG + chr1_1:14742666-14742685 None:intergenic 15.0%
!!! TCTATTTTATTTAGCATAAT+TGG - chr1_1:14742675-14742694 Msa0009890:intron 15.0%
!! CATAAATTCATTGAAAAAAT+TGG - chr1_1:14743671-14743690 Msa0009890:intron 15.0%
!! TATTAAAATGAAGAATACAT+AGG + chr1_1:14744249-14744268 None:intergenic 15.0%
!!! TTTACATTTTGTATTGTGTT+TGG - chr1_1:14734945-14734964 Msa0009890:intron 20.0%
!! AGTATATGAAAAAACAACTT+AGG - chr1_1:14735126-14735145 Msa0009890:intron 20.0%
!!! AATGTATTAGCTATTTCTAT+AGG - chr1_1:14735698-14735717 Msa0009890:CDS 20.0%
!! AATGAAAAAACATATGATAG+TGG + chr1_1:14736061-14736080 None:intergenic 20.0%
!! TGATAAAGATATTTGAAGAA+AGG - chr1_1:14736104-14736123 Msa0009890:intron 20.0%
!! GATAAAGATATTTGAAGAAA+GGG - chr1_1:14736105-14736124 Msa0009890:intron 20.0%
!! TTAAAGCAATTTGATCAAAA+CGG + chr1_1:14736383-14736402 None:intergenic 20.0%
!! CGAAAAATTCATTTAAACAA+AGG - chr1_1:14736535-14736554 Msa0009890:intron 20.0%
!!! AAAATTATCATCTAAGATGA+CGG - chr1_1:14736731-14736750 Msa0009890:intron 20.0%
!!! ATTCAAACATGATTTAAGTT+GGG - chr1_1:14736769-14736788 Msa0009890:intron 20.0%
!!! AGCAAATCTTTTTTCTTATT+AGG + chr1_1:14737093-14737112 None:intergenic 20.0%
!! TAATAAGAAAAAAGATTTGC+TGG - chr1_1:14737092-14737111 Msa0009890:CDS 20.0%
!! ATTTCAGTTCATAATTTACT+TGG - chr1_1:14737331-14737350 Msa0009890:CDS 20.0%
!! GAATAATCAAACAATAGAAT+TGG + chr1_1:14737623-14737642 None:intergenic 20.0%
!! TCTACTACAATATTACAATA+TGG - chr1_1:14738025-14738044 Msa0009890:CDS 20.0%
!!! GCATATAGATTATTTTCTTT+TGG - chr1_1:14738047-14738066 Msa0009890:intron 20.0%
!! AATACATGATTGAATAGTTT+AGG - chr1_1:14738072-14738091 Msa0009890:intron 20.0%
!!! TAAATTTAGCTGGATTTTTT+AGG + chr1_1:14738607-14738626 None:intergenic 20.0%
!!! AATATTTTGTTTATGAAGTC+AGG - chr1_1:14739005-14739024 Msa0009890:intron 20.0%
!! TCCAAAAATTATTCAAATAG+AGG + chr1_1:14739565-14739584 None:intergenic 20.0%
!! CTAAGAGAAATAAGAAATTA+TGG + chr1_1:14740292-14740311 None:intergenic 20.0%
!!! TTTTCTTCTTTATCTTTTGT+AGG - chr1_1:14740657-14740676 Msa0009890:CDS 20.0%
!!! ATTTATCATTTTTATGCTGT+AGG - chr1_1:14740858-14740877 Msa0009890:CDS 20.0%
!!! TTTATCATTTTTATGCTGTA+GGG - chr1_1:14740859-14740878 Msa0009890:CDS 20.0%
!! TCTTCGTAAATTCATTTATA+GGG + chr1_1:14740988-14741007 None:intergenic 20.0%
!! ACAAATTAAACAAGAGAAAA+AGG - chr1_1:14741056-14741075 Msa0009890:intron 20.0%
!! ATATTATATACACATTAACC+GGG + chr1_1:14741144-14741163 None:intergenic 20.0%
!! TGCTTTAATATCTACATTAT+CGG + chr1_1:14741275-14741294 None:intergenic 20.0%
!!! ACTATTTCATTGATAGTATA+TGG + chr1_1:14741901-14741920 None:intergenic 20.0%
!!! GTTCATAATTTTCAAATGTT+AGG + chr1_1:14741988-14742007 None:intergenic 20.0%
!! ATCATTGAAATAGATAATCA+TGG + chr1_1:14742099-14742118 None:intergenic 20.0%
!! ATTGTAGAAAAAGTTGTTTA+AGG - chr1_1:14742182-14742201 Msa0009890:intron 20.0%
!! TTGTAGAAAAAGTTGTTTAA+GGG - chr1_1:14742183-14742202 Msa0009890:intron 20.0%
!! GTTATTTGTATTGAAAATTG+AGG - chr1_1:14742386-14742405 Msa0009890:CDS 20.0%
!! CTAACAATTGAAATTATGTT+TGG - chr1_1:14743433-14743452 Msa0009890:intron 20.0%
!! TGTTTGATATATATACTGTT+TGG - chr1_1:14743712-14743731 Msa0009890:CDS 20.0%
!! GCTAAAAAAAATGACAAAAA+TGG + chr1_1:14743759-14743778 None:intergenic 20.0%
!! TGTATTACTGTACTAATTAT+AGG - chr1_1:14743951-14743970 Msa0009890:CDS 20.0%
!! GTATTACTGTACTAATTATA+GGG - chr1_1:14743952-14743971 Msa0009890:CDS 20.0%
!! TATTACTGTACTAATTATAG+GGG - chr1_1:14743953-14743972 Msa0009890:CDS 20.0%
!! TCTTATCATAAGATGATTAT+AGG - chr1_1:14744053-14744072 Msa0009890:CDS 20.0%
!! TCGTTTTCAGTTGAATTTAA+CGG + chr1_1:14734555-14734574 None:intergenic 25.0%
!!! TGTCTTTTTGATTGTAATGT+AGG - chr1_1:14734904-14734923 Msa0009890:intron 25.0%
! TAATGTAGGAATAAGTTAGA+AGG - chr1_1:14734918-14734937 Msa0009890:intron 25.0%
! TTGTATTGTGTTTGGAAAAT+TGG - chr1_1:14734953-14734972 Msa0009890:intron 25.0%
! TGTATTGTGTTTGGAAAATT+GGG - chr1_1:14734954-14734973 Msa0009890:intron 25.0%
! AAAATAAGCTCAATCTAAAC+GGG + chr1_1:14735053-14735072 None:intergenic 25.0%
! CAAAATAAGCTCAATCTAAA+CGG + chr1_1:14735054-14735073 None:intergenic 25.0%
!! TGCTTGGGAAAATTTAAAAT+TGG - chr1_1:14735364-14735383 Msa0009890:intron 25.0%
! AAATTAGAGAAAGAACACTT+AGG - chr1_1:14735393-14735412 Msa0009890:intron 25.0%
! AACACTTAGGTTTACTATTT+GGG - chr1_1:14735406-14735425 Msa0009890:intron 25.0%
! TAGCTTCTGTTATGAAAATT+AGG - chr1_1:14735517-14735536 Msa0009890:CDS 25.0%
! AGCTTCTGTTATGAAAATTA+GGG - chr1_1:14735518-14735537 Msa0009890:CDS 25.0%
! TAGTTTATTAAAGGTCTGTT+AGG + chr1_1:14735901-14735920 None:intergenic 25.0%
! AAGAAAAACATGAATTACCA+AGG + chr1_1:14736245-14736264 None:intergenic 25.0%
! TTAACAAATGTCTGTCTATT+AGG - chr1_1:14736399-14736418 Msa0009890:intron 25.0%
! TAAGGTAAAAACTAGAGTAA+GGG + chr1_1:14736447-14736466 None:intergenic 25.0%
! TTAAGGTAAAAACTAGAGTA+AGG + chr1_1:14736448-14736467 None:intergenic 25.0%
! TTCATTTAAACAAAGGAATC+TGG - chr1_1:14736542-14736561 Msa0009890:intron 25.0%
! TCATTTAAACAAAGGAATCT+GGG - chr1_1:14736543-14736562 Msa0009890:intron 25.0%
!!! CTAATTTTTTAGCCGAATTT+CGG - chr1_1:14736614-14736633 Msa0009890:intron 25.0%
!!! AGTAAAAGAAAGTCATTTTG+AGG + chr1_1:14736648-14736667 None:intergenic 25.0%
! CATTCAAACATGATTTAAGT+TGG - chr1_1:14736768-14736787 Msa0009890:intron 25.0%
!!! TTCAAACATGATTTAAGTTG+GGG - chr1_1:14736770-14736789 Msa0009890:intron 25.0%
!!! AGCTCAATTTTAGTAAAATG+AGG - chr1_1:14736942-14736961 Msa0009890:intron 25.0%
! AAGAAAGTTCATGTTAACAA+AGG + chr1_1:14737283-14737302 None:intergenic 25.0%
!!! CTTTTTTTTTATGCTTTGAG+TGG - chr1_1:14737507-14737526 Msa0009890:intron 25.0%
! TATACGTAAGAGTAGATTAA+CGG + chr1_1:14737993-14738012 None:intergenic 25.0%
!!! ACACGTGAACATTTATTTTA+CGG - chr1_1:14738151-14738170 Msa0009890:intron 25.0%
! ATATACTTCAAGAACTAATG+GGG + chr1_1:14738366-14738385 None:intergenic 25.0%
! GATATACTTCAAGAACTAAT+GGG + chr1_1:14738367-14738386 None:intergenic 25.0%
!! AAAGTTTTTACATTCTGCAA+GGG + chr1_1:14738527-14738546 None:intergenic 25.0%
!! AAAAGTTTTTACATTCTGCA+AGG + chr1_1:14738528-14738547 None:intergenic 25.0%
!! GCAGAATGTAAAAACTTTTA+AGG - chr1_1:14738529-14738548 Msa0009890:intron 25.0%
!!! AAAACTTTTAAGGATGTGAA+AGG - chr1_1:14738539-14738558 Msa0009890:intron 25.0%
!! CAATAACTTTTATAGACCTT+TGG + chr1_1:14738650-14738669 None:intergenic 25.0%
! CAAAGGTCTATAAAAGTTAT+TGG - chr1_1:14738648-14738667 Msa0009890:intron 25.0%
!! ATTCTATAGTCCTATACTTT+TGG - chr1_1:14739109-14739128 Msa0009890:intron 25.0%
!! TTCTATAGTCCTATACTTTT+GGG - chr1_1:14739110-14739129 Msa0009890:intron 25.0%
!! GCCTCTATTTGAATAATTTT+TGG - chr1_1:14739561-14739580 Msa0009890:intron 25.0%
! TTCACAAACTTGTAGTTATT+TGG + chr1_1:14739635-14739654 None:intergenic 25.0%
! AATTTAACAAGCAAAAGTCA+AGG - chr1_1:14739708-14739727 Msa0009890:intron 25.0%
! AAAAAAAAACACCCTTAATG+CGG - chr1_1:14739887-14739906 Msa0009890:intron 25.0%
! CAGGGAAAAAAATAAAAACA+AGG - chr1_1:14739933-14739952 Msa0009890:CDS 25.0%
!! TCTATTTTACGGGTATTTTT+GGG - chr1_1:14740162-14740181 Msa0009890:intron 25.0%
! ATTGTAATGTTCAAATTGTC+TGG + chr1_1:14740238-14740257 None:intergenic 25.0%
!! TAAATTTGATCTGTGTCTTT+TGG - chr1_1:14740378-14740397 Msa0009890:intron 25.0%
! ATAAAGTTTAATATGTTGGC+TGG - chr1_1:14740445-14740464 Msa0009890:intron 25.0%
! TCATCAATGAAAATAATGCA+AGG + chr1_1:14740685-14740704 None:intergenic 25.0%
! CTTCGTAAATTCATTTATAG+GGG + chr1_1:14740987-14741006 None:intergenic 25.0%
! CTCTTCGTAAATTCATTTAT+AGG + chr1_1:14740989-14741008 None:intergenic 25.0%
!!! AATTTGTTAATTCTTGCGAT+AGG + chr1_1:14741043-14741062 None:intergenic 25.0%
!! TTCATTGATAGTATATGGAA+TGG + chr1_1:14741896-14741915 None:intergenic 25.0%
!! ATAGATAATCATGGTTAGTT+TGG + chr1_1:14742090-14742109 None:intergenic 25.0%
! TCTACAATAAAGATTGTTGT+TGG + chr1_1:14742170-14742189 None:intergenic 25.0%
!! AAGTTGTTTAAGGGTATAAT+TGG - chr1_1:14742192-14742211 Msa0009890:intron 25.0%
!! AGTTGTTTAAGGGTATAATT+GGG - chr1_1:14742193-14742212 Msa0009890:intron 25.0%
!!! TTGAAAATTGAGGGTATTTT+TGG - chr1_1:14742396-14742415 Msa0009890:CDS 25.0%
!! TTAGAAATTACTCTAGGAAA+TGG + chr1_1:14742601-14742620 None:intergenic 25.0%
! ATGCTCAGTTATGTTATTAA+TGG - chr1_1:14742738-14742757 Msa0009890:intron 25.0%
! ATGAATTTATGTACCTCAAA+AGG + chr1_1:14743662-14743681 None:intergenic 25.0%
! ATCAAACATTGCATAATTCA+GGG + chr1_1:14743700-14743719 None:intergenic 25.0%
! TATCAAACATTGCATAATTC+AGG + chr1_1:14743701-14743720 None:intergenic 25.0%
!!! TCATTTTTTTTAGCATGAGA+AGG - chr1_1:14743765-14743784 Msa0009890:CDS 25.0%
! GATTAAAAAAAACTACCTGT+AGG + chr1_1:14744000-14744019 None:intergenic 25.0%
! TCTTATGATAAGAATTGCAT+GGG + chr1_1:14744046-14744065 None:intergenic 25.0%
! ATCTTATGATAAGAATTGCA+TGG + chr1_1:14744047-14744066 None:intergenic 25.0%
AAAAAAATCCACATGTACGA+CGG - chr1_1:14734227-14734246 Msa0009890:three_prime_UTR 30.0%
GTAACCTTATCCAATGAAAT+TGG + chr1_1:14734255-14734274 None:intergenic 30.0%
GTATTGTGTTTGGAAAATTG+GGG - chr1_1:14734955-14734974 Msa0009890:intron 30.0%
!! TAGTTTGGTTTGAAGATTGT+AGG - chr1_1:14734980-14734999 Msa0009890:intron 30.0%
TCGAGTGATTAAAGAACTTT+AGG - chr1_1:14735026-14735045 Msa0009890:intron 30.0%
CGAGTGATTAAAGAACTTTA+GGG - chr1_1:14735027-14735046 Msa0009890:intron 30.0%
CAAAATAAGCTCAATCCAAA+CGG - chr1_1:14735228-14735247 Msa0009890:intron 30.0%
AAAATAAGCTCAATCCAAAC+GGG - chr1_1:14735229-14735248 Msa0009890:intron 30.0%
CCAAAACAAATTCTCTCAAA+CGG + chr1_1:14735273-14735292 None:intergenic 30.0%
!!! TTTTTTTTGTCTTGCCTTAG+TGG + chr1_1:14735316-14735335 None:intergenic 30.0%
GAACACTTAGGTTTACTATT+TGG - chr1_1:14735405-14735424 Msa0009890:intron 30.0%
AGCAGTACTATACTAATTCT+AGG + chr1_1:14735438-14735457 None:intergenic 30.0%
!! GGTTCTAAGATTAAGAAAAG+AGG - chr1_1:14735539-14735558 Msa0009890:CDS 30.0%
ATAAGTTATTCACCCAAACA+GGG + chr1_1:14735639-14735658 None:intergenic 30.0%
AATAAGTTATTCACCCAAAC+AGG + chr1_1:14735640-14735659 None:intergenic 30.0%
GAACTTAAGAAAACAGCTTA+TGG + chr1_1:14735829-14735848 None:intergenic 30.0%
!!! TTTTCTAAGATAGTGACACA+TGG + chr1_1:14735945-14735964 None:intergenic 30.0%
!! ACATAATAGTTATTTTCGGC+TGG - chr1_1:14736002-14736021 Msa0009890:intron 30.0%
!! CATAATAGTTATTTTCGGCT+GGG - chr1_1:14736003-14736022 Msa0009890:intron 30.0%
AATATCTTTATCACAGACTC+AGG + chr1_1:14736097-14736116 None:intergenic 30.0%
AAAACATGAATTACCAAGGA+GGG + chr1_1:14736241-14736260 None:intergenic 30.0%
AAAAACATGAATTACCAAGG+AGG + chr1_1:14736242-14736261 None:intergenic 30.0%
! TGTAGCTATTTGTTGATACT+AGG - chr1_1:14736357-14736376 Msa0009890:intron 30.0%
! TTTTTACCTTAAGCTGCTTA+TGG - chr1_1:14736456-14736475 Msa0009890:intron 30.0%
!!! TTTTGGGATAGTTGTTCATT+GGG - chr1_1:14736479-14736498 Msa0009890:intron 30.0%
TTAGAAAAAAGTCAAGGATC+AGG + chr1_1:14736598-14736617 None:intergenic 30.0%
!! AAAAGAAAGTCATTTTGAGG+CGG + chr1_1:14736645-14736664 None:intergenic 30.0%
AACACAACCATAATGCTAAT+AGG - chr1_1:14736699-14736718 Msa0009890:intron 30.0%
TGTGAAACCTATTAGCATTA+TGG + chr1_1:14736709-14736728 None:intergenic 30.0%
!! TCAAACATGATTTAAGTTGG+GGG - chr1_1:14736771-14736790 Msa0009890:intron 30.0%
! AAACAGCATTACAACTTTTG+TGG + chr1_1:14736883-14736902 None:intergenic 30.0%
ACAAAAGTTGTAATGCTGTT+TGG - chr1_1:14736882-14736901 Msa0009890:intron 30.0%
!!! TAAGCTCTTGTTGGTTTTTA+GGG + chr1_1:14736922-14736941 None:intergenic 30.0%
!!! TTAAGCTCTTGTTGGTTTTT+AGG + chr1_1:14736923-14736942 None:intergenic 30.0%
AAATGAGGATACAAAGTCAA+TGG - chr1_1:14736957-14736976 Msa0009890:intron 30.0%
TCAATGGTAGACATACAATA+GGG - chr1_1:14736973-14736992 Msa0009890:intron 30.0%
TGAGACACACATATAAGTAT+AGG + chr1_1:14737537-14737556 None:intergenic 30.0%
!!! ATGAAGCTGCTTCATTTTTT+AGG - chr1_1:14737653-14737672 Msa0009890:CDS 30.0%
TTGAGAAAAAGAGAGAGATA+GGG + chr1_1:14737781-14737800 None:intergenic 30.0%
ATTGAGAAAAAGAGAGAGAT+AGG + chr1_1:14737782-14737801 None:intergenic 30.0%
GAATACAAGTATGCATCAAA+GGG + chr1_1:14737822-14737841 None:intergenic 30.0%
ATACGTAAGAGTAGATTAAC+GGG + chr1_1:14737992-14738011 None:intergenic 30.0%
TGTGTATTAGCAAGAAATCT+GGG - chr1_1:14738095-14738114 Msa0009890:intron 30.0%
!!! CACGTGAACATTTATTTTAC+GGG - chr1_1:14738152-14738171 Msa0009890:intron 30.0%
TATACTTCAAGAACTAATGG+GGG + chr1_1:14738365-14738384 None:intergenic 30.0%
GGATATACTTCAAGAACTAA+TGG + chr1_1:14738368-14738387 None:intergenic 30.0%
AGCTTCCATATGACAAATAA+GGG + chr1_1:14738422-14738441 None:intergenic 30.0%
CTCTTGCATATACGATATAT+CGG - chr1_1:14738440-14738459 Msa0009890:intron 30.0%
! AAGTTTTTACATTCTGCAAG+GGG + chr1_1:14738526-14738545 None:intergenic 30.0%
CTAACAAACATGTAAAGCTT+TGG - chr1_1:14738835-14738854 Msa0009890:intron 30.0%
! TTTTATCTAGGCACGTATAA+AGG + chr1_1:14738945-14738964 None:intergenic 30.0%
CTATAGAATTTAACTGACCT+TGG + chr1_1:14739098-14739117 None:intergenic 30.0%
! CAAAAACTTCCCAAAAGTAT+AGG + chr1_1:14739122-14739141 None:intergenic 30.0%
!! CTATACTTTTGGGAAGTTTT+TGG - chr1_1:14739120-14739139 Msa0009890:intron 30.0%
!! TTTTTGGAAGGACTTAAATC+CGG - chr1_1:14739136-14739155 Msa0009890:intron 30.0%
!! ATCTGATTGTTTGCTATATC+TGG - chr1_1:14739273-14739292 Msa0009890:intron 30.0%
!! TCTGATTGTTTGCTATATCT+GGG - chr1_1:14739274-14739293 Msa0009890:intron 30.0%
TGCTAGATTATGTTAAGAAG+TGG - chr1_1:14739381-14739400 Msa0009890:intron 30.0%
GCTAGATTATGTTAAGAAGT+GGG - chr1_1:14739382-14739401 Msa0009890:intron 30.0%
! AAGGGTATATTCTGTTATTC+TGG - chr1_1:14739422-14739441 Msa0009890:intron 30.0%
!!! TGACAACTTGTCACTTTTTA+TGG + chr1_1:14739672-14739691 None:intergenic 30.0%
! TAGTTTTTGCAGAATAGAGA+AGG - chr1_1:14740085-14740104 Msa0009890:intron 30.0%
! CTCTATTTTACGGGTATTTT+TGG - chr1_1:14740161-14740180 Msa0009890:intron 30.0%
! TCTTATTTCTCTTAGATCTG+TGG - chr1_1:14740297-14740316 Msa0009890:intron 30.0%
! AAAGCAACAAACCTTCTTTT+TGG + chr1_1:14740555-14740574 None:intergenic 30.0%
! GTGTGTTGGTAAACTAAAAT+AGG + chr1_1:14740604-14740623 None:intergenic 30.0%
!!! ATTTTAGTTTACCAACACAC+AGG - chr1_1:14740604-14740623 Msa0009890:CDS 30.0%
AACTTCTTGTTGAAATGGAT+GGG - chr1_1:14740767-14740786 Msa0009890:intron 30.0%
GCTGTAGGGAATAATATTAA+TGG - chr1_1:14740873-14740892 Msa0009890:CDS 30.0%
GATTGAAATAGAAACTGGAA+AGG + chr1_1:14741109-14741128 None:intergenic 30.0%
GTAAGATGACTAACAAATTC+TGG - chr1_1:14741169-14741188 Msa0009890:intron 30.0%
! AGTATATGATTCGCATTGAT+TGG + chr1_1:14741372-14741391 None:intergenic 30.0%
TATATCACATACACTAGATC+TGG - chr1_1:14741424-14741443 Msa0009890:intron 30.0%
TGCAAAAGACCGAATAATTA+TGG - chr1_1:14741523-14741542 Msa0009890:intron 30.0%
GCAAAAGACCGAATAATTAT+GGG - chr1_1:14741524-14741543 Msa0009890:intron 30.0%
GCGAAAAACAATGTTTGTAT+CGG - chr1_1:14741553-14741572 Msa0009890:intron 30.0%
AAAAACAATGTTTGTATCGG+AGG - chr1_1:14741556-14741575 Msa0009890:intron 30.0%
TGTAGGAATATGTATATGTC+AGG - chr1_1:14741595-14741614 Msa0009890:intron 30.0%
AACATAGGTTTACAACTACA+GGG + chr1_1:14741733-14741752 None:intergenic 30.0%
ATGTTAGGCAATAAAAAGAG+TGG + chr1_1:14741973-14741992 None:intergenic 30.0%
! TAAGGGTATAATTGGGATAA+TGG - chr1_1:14742200-14742219 Msa0009890:intron 30.0%
GCAACTAACTATTCATTAGA+TGG + chr1_1:14742502-14742521 None:intergenic 30.0%
!! AGTTGATAGGATAGGTAAAT+TGG - chr1_1:14742543-14742562 Msa0009890:intron 30.0%
ATTGATGTCTCATCATTTGA+GGG + chr1_1:14742899-14742918 None:intergenic 30.0%
TATTGATGTCTCATCATTTG+AGG + chr1_1:14742900-14742919 None:intergenic 30.0%
CACAAATGAACATCAACAAA+AGG + chr1_1:14743153-14743172 None:intergenic 30.0%
AGCAGAAAGTAAGATATATC+TGG + chr1_1:14743208-14743227 None:intergenic 30.0%
!!! GTATTTTAACTCTCTTCACA+AGG - chr1_1:14743289-14743308 Msa0009890:intron 30.0%
AATCGGACCAATTCATATAA+AGG - chr1_1:14743337-14743356 Msa0009890:intron 30.0%
!! TTAGTTGATTTGCTCTTCTA+AGG - chr1_1:14743457-14743476 Msa0009890:intron 30.0%
GACATCAACAATCAAATTCA+TGG - chr1_1:14743479-14743498 Msa0009890:intron 30.0%
! GAATCAAAAGTAACCTTTTG+AGG - chr1_1:14743646-14743665 Msa0009890:intron 30.0%
TGTACAGTATAAATTCCTAC+AGG - chr1_1:14743982-14744001 Msa0009890:CDS 30.0%
TTTGCTACACAGATATTCAA+AGG + chr1_1:14744092-14744111 None:intergenic 30.0%
AGTAGAACGAACTCAAACTA+TGG - chr1_1:14734314-14734333 Msa0009890:three_prime_UTR 35.0%
TGAGGTTTAAGAAGAGTAGA+GGG + chr1_1:14734399-14734418 None:intergenic 35.0%
ATGAGGTTTAAGAAGAGTAG+AGG + chr1_1:14734400-14734419 None:intergenic 35.0%
!! GAATTTAACGGTTCTAGGTT+AGG + chr1_1:14734543-14734562 None:intergenic 35.0%
CAGTTGAATTTAACGGTTCT+AGG + chr1_1:14734548-14734567 None:intergenic 35.0%
!! TGAAAGTGTTGATGAAGAGA+AGG - chr1_1:14734626-14734645 Msa0009890:exon 35.0%
CCAATCAAAAACACCACTAT+CGG + chr1_1:14734684-14734703 None:intergenic 35.0%
!! CGATAGTGGTGTTTTTGATT+GGG - chr1_1:14734682-14734701 Msa0009890:CDS 35.0%
TTGTTGAGCTTAATAAGCAC+AGG - chr1_1:14734853-14734872 Msa0009890:intron 35.0%
TGGAAAATTGGGGTTTAGTT+TGG - chr1_1:14734965-14734984 Msa0009890:intron 35.0%
AAATAAGCTCAATCCAAACG+GGG - chr1_1:14735230-14735249 Msa0009890:intron 35.0%
!! CCGTTTGAGAGAATTTGTTT+TGG - chr1_1:14735270-14735289 Msa0009890:intron 35.0%
AAGAAAAGAGGAAGAGAAAC+TGG - chr1_1:14735551-14735570 Msa0009890:CDS 35.0%
TCCAAAGATGCAATACACTT+AGG - chr1_1:14735613-14735632 Msa0009890:CDS 35.0%
TGGGTTTGTAATTCTTGAGA+TGG - chr1_1:14736022-14736041 Msa0009890:intron 35.0%
! CTTAAGCTGCTTATGGTTTT+GGG - chr1_1:14736463-14736482 Msa0009890:intron 35.0%
!!! GTTTTGGGATAGTTGTTCAT+TGG - chr1_1:14736478-14736497 Msa0009890:intron 35.0%
!! CAAAGGAATCTGGGATTTTT+CGG - chr1_1:14736552-14736571 Msa0009890:intron 35.0%
TTCGGCCAAAATTCTGTAAA+AGG - chr1_1:14736570-14736589 Msa0009890:intron 35.0%
TCGGCCAAAATTCTGTAAAA+GGG - chr1_1:14736571-14736590 Msa0009890:intron 35.0%
! AGGACCCTTTTACAGAATTT+TGG + chr1_1:14736578-14736597 None:intergenic 35.0%
!!! ATTTTTTAGCCGAATTTCGG+AGG - chr1_1:14736617-14736636 Msa0009890:intron 35.0%
TTAGCATTATGGTTGTGTTC+AGG + chr1_1:14736698-14736717 None:intergenic 35.0%
!! TCTAAGATGACGGAGAAATT+AGG - chr1_1:14736741-14736760 Msa0009890:intron 35.0%
!! CTAAGATGACGGAGAAATTA+GGG - chr1_1:14736742-14736761 Msa0009890:intron 35.0%
!! TAAGATGACGGAGAAATTAG+GGG - chr1_1:14736743-14736762 Msa0009890:intron 35.0%
AATTGAGCTTAAGCTCTTGT+TGG + chr1_1:14736931-14736950 None:intergenic 35.0%
GTCAATGGTAGACATACAAT+AGG - chr1_1:14736972-14736991 Msa0009890:intron 35.0%
ATGCATTTGAGAGGAAAGTA+AGG - chr1_1:14737006-14737025 Msa0009890:CDS 35.0%
ATAATGACGTTGTTTGACCA+AGG - chr1_1:14737056-14737075 Msa0009890:CDS 35.0%
ATTTCTCCGAAATATGCTTC+TGG - chr1_1:14737178-14737197 Msa0009890:intron 35.0%
! TCAGATCCAGAAGCATATTT+CGG + chr1_1:14737187-14737206 None:intergenic 35.0%
!! ATTTTGTTTACCGTAGCTGT+TGG - chr1_1:14737729-14737748 Msa0009890:intron 35.0%
GGAATACAAGTATGCATCAA+AGG + chr1_1:14737823-14737842 None:intergenic 35.0%
GCTGCACTTCAAAAATACAT+CGG - chr1_1:14737873-14737892 Msa0009890:intron 35.0%
TCAAAAATACATCGGAAGCT+TGG - chr1_1:14737881-14737900 Msa0009890:intron 35.0%
CAAAAATACATCGGAAGCTT+GGG - chr1_1:14737882-14737901 Msa0009890:intron 35.0%
AAGTTCATCTTATACCCCAA+AGG - chr1_1:14737932-14737951 Msa0009890:intron 35.0%
!!! ATTAACGGGTTAACCTTTTC+TGG + chr1_1:14737978-14737997 None:intergenic 35.0%
GTGTGTATTAGCAAGAAATC+TGG - chr1_1:14738094-14738113 Msa0009890:intron 35.0%
GTCGATGAAATAGTTAGCAA+TGG + chr1_1:14738311-14738330 None:intergenic 35.0%
CCATATGACAAATAAGGGTA+AGG + chr1_1:14738417-14738436 None:intergenic 35.0%
! CCTTACCCTTATTTGTCATA+TGG - chr1_1:14738414-14738433 Msa0009890:intron 35.0%
GAGCTTCCATATGACAAATA+AGG + chr1_1:14738423-14738442 None:intergenic 35.0%
ATCAGTTCCTAAACAGTGAT+TGG + chr1_1:14738771-14738790 None:intergenic 35.0%
! TCATGCTTGTTAGTGCAATT+TGG - chr1_1:14738978-14738997 Msa0009890:intron 35.0%
! CTAAGATGATCCTCTTTTCA+GGG - chr1_1:14739028-14739047 Msa0009890:intron 35.0%
! TAAGATGATCCTCTTTTCAG+GGG - chr1_1:14739029-14739048 Msa0009890:intron 35.0%
!! ACTTTTGGGAAGTTTTTGGA+AGG - chr1_1:14739124-14739143 Msa0009890:intron 35.0%
ACGATAGAAAAATGGAACAC+CGG + chr1_1:14739325-14739344 None:intergenic 35.0%
GCACATGATATGCTAGAAAA+GGG - chr1_1:14739404-14739423 Msa0009890:intron 35.0%
GCTCTATTATCATGAAACAG+AGG - chr1_1:14739859-14739878 Msa0009890:intron 35.0%
CTATTATCATGAAACAGAGG+AGG - chr1_1:14739862-14739881 Msa0009890:intron 35.0%
TTTGCAGAATAGAGAAGGAA+AGG - chr1_1:14740090-14740109 Msa0009890:intron 35.0%
TTGCAGAATAGAGAAGGAAA+GGG - chr1_1:14740091-14740110 Msa0009890:intron 35.0%
CCGTAAAATAGAGTCTGTTA+GGG + chr1_1:14740154-14740173 None:intergenic 35.0%
! CCCTAACAGACTCTATTTTA+CGG - chr1_1:14740151-14740170 Msa0009890:intron 35.0%
! CCTAACAGACTCTATTTTAC+GGG - chr1_1:14740152-14740171 Msa0009890:intron 35.0%
ACAACAGATGTACTACAATG+CGG + chr1_1:14740198-14740217 None:intergenic 35.0%
! GTTTAATATGTTGGCTGGTA+TGG - chr1_1:14740450-14740469 Msa0009890:intron 35.0%
! TCATATTTCTGTTCATGCTC+AGG - chr1_1:14740483-14740502 Msa0009890:intron 35.0%
ATTTCAAGCAGCCAAAAAGA+AGG - chr1_1:14740541-14740560 Msa0009890:intron 35.0%
ATTGATGAAATTGATGCCGT+TGG - chr1_1:14740697-14740716 Msa0009890:intron 35.0%
CATCCATTTCAACAAGAAGT+TGG + chr1_1:14740768-14740787 None:intergenic 35.0%
CAACTTCTTGTTGAAATGGA+TGG - chr1_1:14740766-14740785 Msa0009890:intron 35.0%
TCCAGTTTCTATTTCAATCC+AGG - chr1_1:14741110-14741129 Msa0009890:CDS 35.0%
ACCTGGATTGAAATAGAAAC+TGG + chr1_1:14741114-14741133 None:intergenic 35.0%
! ATATCTACATTATCGGCTGT+AGG + chr1_1:14741268-14741287 None:intergenic 35.0%
!! ATATGATTCGCATTGATTGG+AGG + chr1_1:14741369-14741388 None:intergenic 35.0%
ATTACAGAGAACATCAGTCA+GGG + chr1_1:14741404-14741423 None:intergenic 35.0%
AATTACAGAGAACATCAGTC+AGG + chr1_1:14741405-14741424 None:intergenic 35.0%
GAAATTAACAGCTTCTCAGT+TGG - chr1_1:14741496-14741515 Msa0009890:intron 35.0%
GCTCTGTACCCATAATTATT+CGG + chr1_1:14741535-14741554 None:intergenic 35.0%
! GAGTCAAAAAAGGTATGTGT+AGG - chr1_1:14741578-14741597 Msa0009890:intron 35.0%
!! AGTTTGCTACTTAAGAACTG+TGG - chr1_1:14741624-14741643 Msa0009890:intron 35.0%
TTAAGATAATGCAGCACAGA+AGG + chr1_1:14741696-14741715 None:intergenic 35.0%
GAACATAGGTTTACAACTAC+AGG + chr1_1:14741734-14741753 None:intergenic 35.0%
CTGTTGTAAACTCAGAACAT+AGG + chr1_1:14741748-14741767 None:intergenic 35.0%
! CTATGTTCTGAGTTTACAAC+AGG - chr1_1:14741746-14741765 Msa0009890:intron 35.0%
TGAGTTTACAACAGGCTTAT+AGG - chr1_1:14741754-14741773 Msa0009890:intron 35.0%
TTGCTAAATCAGTTGTTAGC+TGG - chr1_1:14742518-14742537 Msa0009890:intron 35.0%
! TTACTCTAGGAAATGGTTCA+AGG + chr1_1:14742594-14742613 None:intergenic 35.0%
AGCAGGTTAGAAATTACTCT+AGG + chr1_1:14742607-14742626 None:intergenic 35.0%
!!! TTTGTTTTTGAGCAATCAGC+AGG + chr1_1:14742624-14742643 None:intergenic 35.0%
GCATAATTGGATTGTTGTGT+TGG - chr1_1:14742688-14742707 Msa0009890:intron 35.0%
TATTAAGGGCAACAATTGCA+TGG + chr1_1:14742802-14742821 None:intergenic 35.0%
ATGATTGTTGCCTTGTGAAT+TGG + chr1_1:14742839-14742858 None:intergenic 35.0%
GTTGCAGAAGAACTTATCTT+TGG - chr1_1:14742968-14742987 Msa0009890:intron 35.0%
CAGAAGAACTTATCTTTGGT+CGG - chr1_1:14742972-14742991 Msa0009890:intron 35.0%
AGAAGAACTTATCTTTGGTC+GGG - chr1_1:14742973-14742992 Msa0009890:intron 35.0%
GTTGATGTTCATTTGTGACT+TGG - chr1_1:14743156-14743175 Msa0009890:intron 35.0%
! TTCACAAGGTATCAAGTTGT+GGG - chr1_1:14743303-14743322 Msa0009890:intron 35.0%
GGTCTCTCCTTTATATGAAT+TGG + chr1_1:14743347-14743366 None:intergenic 35.0%
! TGTGAAAGCTCTTCTGAAAA+AGG - chr1_1:14743562-14743581 Msa0009890:intron 35.0%
GTGCTGTAGTATTCTAATAG+TGG + chr1_1:14744140-14744159 None:intergenic 35.0%
!!! TGCTGAGGGCAATATTTTTT+TGG - chr1_1:14744161-14744180 Msa0009890:CDS 35.0%
! CTCTTTCACTCTGTGTTTTG+AGG + chr1_1:14734293-14734312 None:intergenic 40.0%
TTAAGAAGAGTAGAGGGGTT+AGG + chr1_1:14734393-14734412 None:intergenic 40.0%
GAGGTTTAAGAAGAGTAGAG+GGG + chr1_1:14734398-14734417 None:intergenic 40.0%
TTCTAGGTTAGGAGAATCGT+CGG + chr1_1:14734532-14734551 None:intergenic 40.0%
!! AAGTGTTGATGAAGAGAAGG+TGG - chr1_1:14734629-14734648 Msa0009890:exon 40.0%
AGAGTGGGGAAAAGAAAGAT+GGG - chr1_1:14734652-14734671 Msa0009890:CDS 40.0%
!! CCGATAGTGGTGTTTTTGAT+TGG - chr1_1:14734681-14734700 Msa0009890:CDS 40.0%
!! TGGTGTTTTTGATTGGGCTT+TGG - chr1_1:14734688-14734707 Msa0009890:CDS 40.0%
!! GGTGTTTTTGATTGGGCTTT+GGG - chr1_1:14734689-14734708 Msa0009890:CDS 40.0%
AGCGAAAGAAGGATTGAAGA+GGG - chr1_1:14734716-14734735 Msa0009890:CDS 40.0%
! CGTTTTCGGAATTGGTTGAT+TGG - chr1_1:14734739-14734758 Msa0009890:CDS 40.0%
TTTCGGAATTGGTTGATTGG+TGG - chr1_1:14734742-14734761 Msa0009890:CDS 40.0%
! ATTGGCGAAGTTGATTACTG+AGG - chr1_1:14734788-14734807 Msa0009890:intron 40.0%
TGTAGGACATGTAAACCAAG+TGG - chr1_1:14734997-14735016 Msa0009890:CDS 40.0%
AAACGGTTCGTCTCTAACTA+AGG + chr1_1:14735256-14735275 None:intergenic 40.0%
! AGGACATGCAACAATTTGCT+TGG - chr1_1:14735348-14735367 Msa0009890:intron 40.0%
! GGACATGCAACAATTTGCTT+GGG - chr1_1:14735349-14735368 Msa0009890:intron 40.0%
GCCTAAGTGTATTGCATCTT+TGG + chr1_1:14735617-14735636 None:intergenic 40.0%
AATACACTTAGGCCCTGTTT+GGG - chr1_1:14735624-14735643 Msa0009890:CDS 40.0%
!! GCTGTTTTCATATGCTATCG+TGG - chr1_1:14735763-14735782 Msa0009890:CDS 40.0%
CTCGCAAATCTTATGTCTGT+TGG - chr1_1:14735860-14735879 Msa0009890:intron 40.0%
AGAATATCTTCGAGCACTAG+TGG - chr1_1:14736156-14736175 Msa0009890:intron 40.0%
TGCAGAATATCTTCCTGATG+AGG - chr1_1:14736192-14736211 Msa0009890:intron 40.0%
TATCTTCCTGATGAGGAATC+TGG - chr1_1:14736199-14736218 Msa0009890:intron 40.0%
AGTGCTTCATTGTTCACTAG+TGG - chr1_1:14736306-14736325 Msa0009890:intron 40.0%
TAGCTACAAAACAAGATGCC+TGG + chr1_1:14736345-14736364 None:intergenic 40.0%
CCAAAACCATAAGCAGCTTA+AGG + chr1_1:14736465-14736484 None:intergenic 40.0%
! CCTTAAGCTGCTTATGGTTT+TGG - chr1_1:14736462-14736481 Msa0009890:intron 40.0%
! GACTTTCTTTTACTACCGAG+AGG - chr1_1:14736654-14736673 Msa0009890:intron 40.0%
! TGTGTTCAGGTTATGAGACT+TGG + chr1_1:14736685-14736704 None:intergenic 40.0%
!! AAGATGACGGAGAAATTAGG+GGG - chr1_1:14736744-14736763 Msa0009890:intron 40.0%
!! TGATTTAAGTTGGGGGAATG+AGG - chr1_1:14736778-14736797 Msa0009890:intron 40.0%
GAGAAGTGAATGCATTTGAG+AGG - chr1_1:14736997-14737016 Msa0009890:CDS 40.0%
AGTTGCAAGAGTTGAAACAG+CGG - chr1_1:14737392-14737411 Msa0009890:intron 40.0%
TTTACCATAACCACGTGCAA+CGG + chr1_1:14737472-14737491 None:intergenic 40.0%
TACAAGTATGCATCAAAGGG+TGG + chr1_1:14737819-14737838 None:intergenic 40.0%
TGTACGTCTGTCAGGTTTAT+GGG - chr1_1:14737846-14737865 Msa0009890:CDS 40.0%
! TTCCTTGTTTAGCTCCTTTG+GGG + chr1_1:14737949-14737968 None:intergenic 40.0%
! CTTCCTTGTTTAGCTCCTTT+GGG + chr1_1:14737950-14737969 None:intergenic 40.0%
! ACTTCCTTGTTTAGCTCCTT+TGG + chr1_1:14737951-14737970 None:intergenic 40.0%
TGTCCAACTTTCTTGTTGAC+TGG + chr1_1:14738333-14738352 None:intergenic 40.0%
TGATGCAAAGCAAGAACTTG+AGG - chr1_1:14738568-14738587 Msa0009890:intron 40.0%
CTCTAGTCCAATCACTGTTT+AGG - chr1_1:14738761-14738780 Msa0009890:intron 40.0%
! GCTAAGATGATCCTCTTTTC+AGG - chr1_1:14739027-14739046 Msa0009890:intron 40.0%
!! GTTCCATTTTTCTATCGTGC+CGG - chr1_1:14739327-14739346 Msa0009890:intron 40.0%
!!! ATTTTTCTATCGTGCCGGTT+CGG - chr1_1:14739332-14739351 Msa0009890:intron 40.0%
GGCACATGATATGCTAGAAA+AGG - chr1_1:14739403-14739422 Msa0009890:intron 40.0%
AACGACTATGTTGTCAATCG+TGG - chr1_1:14739478-14739497 Msa0009890:CDS 40.0%
ATGTTGTCAATCGTGGATAG+TGG - chr1_1:14739485-14739504 Msa0009890:CDS 40.0%
! CTATCCTGGTATACCAGTTT+TGG + chr1_1:14739527-14739546 None:intergenic 40.0%
ATGAAGTTGCCATGACTGAA+CGG - chr1_1:14739805-14739824 Msa0009890:intron 40.0%
TTGTCCGAATAGAACAGAGA+AGG + chr1_1:14739913-14739932 None:intergenic 40.0%
TCTGTTCTATTCGGACAACA+GGG - chr1_1:14739915-14739934 Msa0009890:intron 40.0%
TCTGCAAGCAGAACAAGAAA+GGG + chr1_1:14740049-14740068 None:intergenic 40.0%
TTCTGCAAGCAGAACAAGAA+AGG + chr1_1:14740050-14740069 None:intergenic 40.0%
TTCTTGTTCTGCTTGCAGAA+TGG - chr1_1:14740050-14740069 Msa0009890:intron 40.0%
! TGCTTGCAGAATGGATGTTT+TGG - chr1_1:14740059-14740078 Msa0009890:intron 40.0%
AGAGAAGGAAAGGGAATGTT+AGG - chr1_1:14740100-14740119 Msa0009890:intron 40.0%
GAGAAGGAAAGGGAATGTTA+GGG - chr1_1:14740101-14740120 Msa0009890:intron 40.0%
CCCGTAAAATAGAGTCTGTT+AGG + chr1_1:14740155-14740174 None:intergenic 40.0%
CAACAGATGTACTACAATGC+GGG + chr1_1:14740197-14740216 None:intergenic 40.0%
CTGTTTCCTAGTTGATCCAA+CGG + chr1_1:14740716-14740735 None:intergenic 40.0%
TTGGATCAACTAGGAAACAG+TGG - chr1_1:14740716-14740735 Msa0009890:intron 40.0%
TGGATCAACTAGGAAACAGT+GGG - chr1_1:14740717-14740736 Msa0009890:intron 40.0%
!! AAGTTGGTGCAATGTCTTCT+TGG + chr1_1:14740752-14740771 None:intergenic 40.0%
GCACCAACTTCTTGTTGAAA+TGG - chr1_1:14740762-14740781 Msa0009890:intron 40.0%
AGAGCTGGATCAAGAATATC+AGG + chr1_1:14740913-14740932 None:intergenic 40.0%
ACATGTCGATCAAATCTACC+AGG + chr1_1:14740943-14740962 None:intergenic 40.0%
! CTGGATTTGGTACAACAATC+TGG + chr1_1:14741198-14741217 None:intergenic 40.0%
GATATTAAAGCAATAGCCCG+TGG - chr1_1:14741283-14741302 Msa0009890:intron 40.0%
TAATAGCAGCAATGTTCACC+AGG + chr1_1:14741454-14741473 None:intergenic 40.0%
CATTGCTGCTATTAAAGCTG+CGG - chr1_1:14741460-14741479 Msa0009890:intron 40.0%
TGTATCGGAGGAGTCAAAAA+AGG - chr1_1:14741568-14741587 Msa0009890:intron 40.0%
TTACAACTACAGGGAAGACT+CGG + chr1_1:14741724-14741743 None:intergenic 40.0%
! CTACCCCTTTCAACACTTTT+GGG + chr1_1:14742436-14742455 None:intergenic 40.0%
! ACTACCCCTTTCAACACTTT+TGG + chr1_1:14742437-14742456 None:intergenic 40.0%
!! TTGTTAGCTGGTGAGTTGAT+AGG - chr1_1:14742530-14742549 Msa0009890:intron 40.0%
AGGAAATGGTTCAAGGTACA+GGG + chr1_1:14742587-14742606 None:intergenic 40.0%
TAGGAAATGGTTCAAGGTAC+AGG + chr1_1:14742588-14742607 None:intergenic 40.0%
CATAACTGAGCATGCATCAA+TGG + chr1_1:14742731-14742750 None:intergenic 40.0%
CTTACTGCTTATCATGAGAG+CGG - chr1_1:14742776-14742795 Msa0009890:intron 40.0%
ATTGTTGCCCTTAATACCGA+CGG - chr1_1:14742806-14742825 Msa0009890:intron 40.0%
AGCTCGTCTTGATGTTTGTA+TGG - chr1_1:14742937-14742956 Msa0009890:intron 40.0%
GCTCGTCTTGATGTTTGTAT+GGG - chr1_1:14742938-14742957 Msa0009890:intron 40.0%
! CTTCACAAGGTATCAAGTTG+TGG - chr1_1:14743302-14743321 Msa0009890:intron 40.0%
TGTGGGATGAGTGATACAAT+CGG - chr1_1:14743320-14743339 Msa0009890:intron 40.0%
AGTTTAACAACCTGCAGAAC+AGG + chr1_1:14743521-14743540 None:intergenic 40.0%
CACGATCATATGCATCTCTA+AGG + chr1_1:14743544-14743563 None:intergenic 40.0%
AGGAAAACTTCCAGAACAAC+AGG - chr1_1:14743873-14743892 Msa0009890:CDS 40.0%
TCTTCTTGTTCCTGTTGTTC+TGG + chr1_1:14743886-14743905 None:intergenic 40.0%
AGGAACAAGAAGAAGCAGAA+GGG - chr1_1:14743893-14743912 Msa0009890:CDS 40.0%
! GATAAGAATTGCATGGGCTA+AGG + chr1_1:14744040-14744059 None:intergenic 40.0%
AATCCTGCTAACGATGACAA+AGG - chr1_1:14744113-14744132 Msa0009890:CDS 40.0%
! AATACTACAGCACTTGCTGA+GGG - chr1_1:14744147-14744166 Msa0009890:CDS 40.0%
AACCTTGCTAAGAGACACTT+GGG + chr1_1:14744309-14744328 None:intergenic 40.0%
TAACCTTGCTAAGAGACACT+TGG + chr1_1:14744310-14744329 None:intergenic 40.0%
GGCGCCAATTTCATTGGATA+AGG - chr1_1:14734248-14734267 Msa0009890:three_prime_UTR 45.0%
ATGAGGAATGGGAAGAGAAG+AGG + chr1_1:14734369-14734388 None:intergenic 45.0%
AGGGGTTAGGAATGAGGAAT+GGG + chr1_1:14734380-14734399 None:intergenic 45.0%
! GGTTGAAAAGTGCAGAGAAG+GGG + chr1_1:14734465-14734484 None:intergenic 45.0%
! GGGTTGAAAAGTGCAGAGAA+GGG + chr1_1:14734466-14734485 None:intergenic 45.0%
GATAGGTTCGGGATTAGGTT+CGG + chr1_1:14734508-14734527 None:intergenic 45.0%
AGAATCGTCGGAGATAGGTT+CGG + chr1_1:14734520-14734539 None:intergenic 45.0%
TTAGGAGAATCGTCGGAGAT+AGG + chr1_1:14734525-14734544 None:intergenic 45.0%
ATGAAGAGAAGGTGGAGAGT+GGG - chr1_1:14734637-14734656 Msa0009890:CDS 45.0%
GAGAGTGGGGAAAAGAAAGA+TGG - chr1_1:14734651-14734670 Msa0009890:CDS 45.0%
AGATGGGAGATTACCGATAG+TGG - chr1_1:14734668-14734687 Msa0009890:CDS 45.0%
GAGCGAAAGAAGGATTGAAG+AGG - chr1_1:14734715-14734734 Msa0009890:CDS 45.0%
!!! AGGATTGAAGAGGGCGTTTT+CGG - chr1_1:14734725-14734744 Msa0009890:CDS 45.0%
TTCTTCTCCTGCCTCCAAAA+CGG + chr1_1:14734768-14734787 None:intergenic 45.0%
TTGGAGGCAGGAGAAGAAAT+TGG - chr1_1:14734770-14734789 Msa0009890:CDS 45.0%
GGACATGTAAACCAAGTGGT+TGG - chr1_1:14735001-14735020 Msa0009890:CDS 45.0%
!! TAGTGGCTCTAAGTTCAGTC+AGG + chr1_1:14735299-14735318 None:intergenic 45.0%
GACTGAACTTAGAGCCACTA+AGG - chr1_1:14735299-14735318 Msa0009890:intron 45.0%
CAATACACTTAGGCCCTGTT+TGG - chr1_1:14735623-14735642 Msa0009890:CDS 45.0%
! GGTTTTCCAGATTCCTCATC+AGG + chr1_1:14736208-14736227 None:intergenic 45.0%
GAGGAATCTGGAAAACCTTC+TGG - chr1_1:14736211-14736230 Msa0009890:intron 45.0%
GCTTCATTGTTCACTAGTGG+AGG - chr1_1:14736309-14736328 Msa0009890:intron 45.0%
TCATTGTTCACTAGTGGAGG+TGG - chr1_1:14736312-14736331 Msa0009890:intron 45.0%
!! AGATGACGGAGAAATTAGGG+GGG - chr1_1:14736745-14736764 Msa0009890:intron 45.0%
!! TTTAAGTTGGGGGAATGAGG+TGG - chr1_1:14736781-14736800 Msa0009890:intron 45.0%
ATTAGGTTCGTCAACGACCT+TGG + chr1_1:14737076-14737095 None:intergenic 45.0%
GTTGCAAGAGTTGAAACAGC+GGG - chr1_1:14737393-14737412 Msa0009890:intron 45.0%
! GATGAGACTTTTCTGAACCC+TGG - chr1_1:14737430-14737449 Msa0009890:intron 45.0%
GCTGCTTCTCAGATATTCCA+GGG + chr1_1:14737450-14737469 None:intergenic 45.0%
GTTTACCGTAGCTGTTGGAT+TGG - chr1_1:14737734-14737753 Msa0009890:intron 45.0%
GAGAGAGATAGGGAAACTAG+AGG + chr1_1:14737771-14737790 None:intergenic 45.0%
ATTCCTACTGTACGTCTGTC+AGG - chr1_1:14737838-14737857 Msa0009890:CDS 45.0%
AAACCTGACAGACGTACAGT+AGG + chr1_1:14737844-14737863 None:intergenic 45.0%
CTGTACGTCTGTCAGGTTTA+TGG - chr1_1:14737845-14737864 Msa0009890:CDS 45.0%
AAATACATCGGAAGCTTGGG+TGG - chr1_1:14737885-14737904 Msa0009890:intron 45.0%
AATACATCGGAAGCTTGGGT+GGG - chr1_1:14737886-14737905 Msa0009890:intron 45.0%
TACCCCAAAGGAGCTAAACA+AGG - chr1_1:14737944-14737963 Msa0009890:intron 45.0%
CAAGGAAGTGATGCCAGAAA+AGG - chr1_1:14737962-14737981 Msa0009890:intron 45.0%
TGGGTTGTCAGTGAGTATCT+TGG - chr1_1:14738114-14738133 Msa0009890:intron 45.0%
CGACCAGTCAACAAGAAAGT+TGG - chr1_1:14738327-14738346 Msa0009890:intron 45.0%
ACTTCAAGAACTAATGGGGG+TGG + chr1_1:14738362-14738381 None:intergenic 45.0%
TGCAAAGCAAGAACTTGAGG+AGG - chr1_1:14738571-14738590 Msa0009890:intron 45.0%
CCAAGGCGAGTAAATTTAGC+TGG + chr1_1:14738617-14738636 None:intergenic 45.0%
CCAGCTAAATTTACTCGCCT+TGG - chr1_1:14738614-14738633 Msa0009890:intron 45.0%
GCTAAATTTACTCGCCTTGG+AGG - chr1_1:14738617-14738636 Msa0009890:intron 45.0%
CAGAAGAATCCCCTGAAAAG+AGG + chr1_1:14739041-14739060 None:intergenic 45.0%
TTTCAGGGGATTCTTCTGAC+TGG - chr1_1:14739043-14739062 Msa0009890:intron 45.0%
TTCAGGGGATTCTTCTGACT+GGG - chr1_1:14739044-14739063 Msa0009890:intron 45.0%
! AGCAGAGTTTTTCCAGTTCC+AGG + chr1_1:14739073-14739092 None:intergenic 45.0%
TGGAAAAACTCTGCTAGCCA+AGG - chr1_1:14739078-14739097 Msa0009890:intron 45.0%
AAGGACTTAAATCCGGACTC+TGG - chr1_1:14739143-14739162 Msa0009890:intron 45.0%
CACAGATAAGAACCAGAGTC+CGG + chr1_1:14739158-14739177 None:intergenic 45.0%
! TGCTATATCTGGGACCTTGA+AGG - chr1_1:14739284-14739303 Msa0009890:intron 45.0%
TTCTCCAGCAATAGCCTTCA+AGG + chr1_1:14739301-14739320 None:intergenic 45.0%
GAACCGGCACGATAGAAAAA+TGG + chr1_1:14739333-14739352 None:intergenic 45.0%
CATCTCCTCAAATTCCGAAC+CGG + chr1_1:14739349-14739368 None:intergenic 45.0%
TGGTATACCAGGATAGCATG+TGG - chr1_1:14739531-14739550 Msa0009890:intron 45.0%
TATACCAGGATAGCATGTGG+TGG - chr1_1:14739534-14739553 Msa0009890:intron 45.0%
ATACCAGGATAGCATGTGGT+GGG - chr1_1:14739535-14739554 Msa0009890:intron 45.0%
AACAGAGAAGGCCGCATTAA+GGG + chr1_1:14739901-14739920 None:intergenic 45.0%
CTCTGTTCTATTCGGACAAC+AGG - chr1_1:14739914-14739933 Msa0009890:intron 45.0%
! TGCACTGAAATTGTGCTGCT+CGG - chr1_1:14739974-14739993 Msa0009890:CDS 45.0%
AGAATACAGATGCAGTGGCA+GGG - chr1_1:14739997-14740016 Msa0009890:CDS 45.0%
AACAAGAAAGGGAACCTCTG+CGG + chr1_1:14740038-14740057 None:intergenic 45.0%
AGTACATCTGTTGTGCCACA+AGG - chr1_1:14740204-14740223 Msa0009890:intron 45.0%
GTACATCTGTTGTGCCACAA+GGG - chr1_1:14740205-14740224 Msa0009890:intron 45.0%
AGATCTGTGGCGCTATACAT+TGG - chr1_1:14740310-14740329 Msa0009890:intron 45.0%
! TGTTGGCTGGTATGGATGAT+AGG - chr1_1:14740458-14740477 Msa0009890:intron 45.0%
CTGTTCATGCTCAGGTTTGT+TGG - chr1_1:14740491-14740510 Msa0009890:intron 45.0%
!! ATGCTCAGGTTTGTTGGAGT+TGG - chr1_1:14740497-14740516 Msa0009890:intron 45.0%
CATGTAGAAGTCCTGTGTGT+TGG + chr1_1:14740618-14740637 None:intergenic 45.0%
TTGATGCCGTTGGATCAACT+AGG - chr1_1:14740707-14740726 Msa0009890:intron 45.0%
ATCAACTAGGAAACAGTGGG+AGG - chr1_1:14740720-14740739 Msa0009890:intron 45.0%
TCAACTAGGAAACAGTGGGA+GGG - chr1_1:14740721-14740740 Msa0009890:intron 45.0%
GTACCAAATCCAGATGTACG+TGG - chr1_1:14741205-14741224 Msa0009890:intron 45.0%
CAAATCCAGATGTACGTGGT+CGG - chr1_1:14741209-14741228 Msa0009890:intron 45.0%
ACGTGGTCGGCAAGAAATAT+TGG - chr1_1:14741222-14741241 Msa0009890:intron 45.0%
TACACTAGATCTGGCAAACC+TGG - chr1_1:14741433-14741452 Msa0009890:intron 45.0%
GCTATTAAAGCTGCGGTTGA+AGG - chr1_1:14741467-14741486 Msa0009890:intron 45.0%
TACAACTACAGGGAAGACTC+GGG + chr1_1:14741723-14741742 None:intergenic 45.0%
!! TCCAGCCCAAAAGTGTTGAA+AGG - chr1_1:14742428-14742447 Msa0009890:CDS 45.0%
!! CCAGCCCAAAAGTGTTGAAA+GGG - chr1_1:14742429-14742448 Msa0009890:CDS 45.0%
!! CAGCCCAAAAGTGTTGAAAG+GGG - chr1_1:14742430-14742449 Msa0009890:CDS 45.0%
!! AGCTGGTGAGTTGATAGGAT+AGG - chr1_1:14742535-14742554 Msa0009890:intron 45.0%
ATGTGCACCGTCGGTATTAA+GGG + chr1_1:14742816-14742835 None:intergenic 45.0%
ATTCCTAAAGCAGATCCACG+GGG + chr1_1:14742863-14742882 None:intergenic 45.0%
CATTCCTAAAGCAGATCCAC+GGG + chr1_1:14742864-14742883 None:intergenic 45.0%
CCATTCCTAAAGCAGATCCA+CGG + chr1_1:14742865-14742884 None:intergenic 45.0%
CGTCTTGATGTTTGTATGGG+AGG - chr1_1:14742941-14742960 Msa0009890:intron 45.0%
TACCATGTATTGCGCAAGCT+CGG + chr1_1:14743041-14743060 None:intergenic 45.0%
! TATGCTGCTTCCCTGTTATG+TGG - chr1_1:14743062-14743081 Msa0009890:intron 45.0%
GCTGCACTTTCCACATAACA+GGG + chr1_1:14743075-14743094 None:intergenic 45.0%
AGCTGCACTTTCCACATAAC+AGG + chr1_1:14743076-14743095 None:intergenic 45.0%
CGTGACTGCATTTCAGAACT+TGG + chr1_1:14743368-14743387 None:intergenic 45.0%
GACGATTACTTCTCCCGTAT+CGG - chr1_1:14743848-14743867 Msa0009890:CDS 45.0%
ACGATTACTTCTCCCGTATC+GGG - chr1_1:14743849-14743868 Msa0009890:CDS 45.0%
! GAAGTTTTCCTTCCCGATAC+GGG + chr1_1:14743864-14743883 None:intergenic 45.0%
! GGAAGTTTTCCTTCCCGATA+CGG + chr1_1:14743865-14743884 None:intergenic 45.0%
CAGGAACAAGAAGAAGCAGA+AGG - chr1_1:14743892-14743911 Msa0009890:CDS 45.0%
GGAACAAGAAGAAGCAGAAG+GGG - chr1_1:14743894-14743913 Msa0009890:CDS 45.0%
AGCAGAAGGGGATCTTGTAT+TGG - chr1_1:14743906-14743925 Msa0009890:CDS 45.0%
! AGAATTGCATGGGCTAAGGA+GGG + chr1_1:14744036-14744055 None:intergenic 45.0%
! AAGAATTGCATGGGCTAAGG+AGG + chr1_1:14744037-14744056 None:intergenic 45.0%
! GAATACTACAGCACTTGCTG+AGG - chr1_1:14744146-14744165 Msa0009890:CDS 45.0%
!!! TTTTTTTTTTTTTTTTATCT+AGG + chr1_1:14738957-14738976 None:intergenic 5.0%
!! ATAAAAATGATAAATAAATT+TGG + chr1_1:14740853-14740872 None:intergenic 5.0%
TACGACGGCGCCAATTTCAT+TGG - chr1_1:14734242-14734261 Msa0009890:three_prime_UTR 50.0%
GAGGGGTTAGGAATGAGGAA+TGG + chr1_1:14734381-14734400 None:intergenic 50.0%
GAGTAGAGGGGTTAGGAATG+AGG + chr1_1:14734386-14734405 None:intergenic 50.0%
! CGGGTTGAAAAGTGCAGAGA+AGG + chr1_1:14734467-14734486 None:intergenic 50.0%
! GAGTGGGGAAGTGTAGTATC+GGG + chr1_1:14734486-14734505 None:intergenic 50.0%
! GGAGTGGGGAAGTGTAGTAT+CGG + chr1_1:14734487-14734506 None:intergenic 50.0%
TTCGGGATTAGGTTCGGAGT+GGG + chr1_1:14734502-14734521 None:intergenic 50.0%
TCGGAGATAGGTTCGGGATT+AGG + chr1_1:14734513-14734532 None:intergenic 50.0%
GAATCGTCGGAGATAGGTTC+GGG + chr1_1:14734519-14734538 None:intergenic 50.0%
GATGAAGAGAAGGTGGAGAG+TGG - chr1_1:14734636-14734655 Msa0009890:CDS 50.0%
TGAAGAGAAGGTGGAGAGTG+GGG - chr1_1:14734638-14734657 Msa0009890:CDS 50.0%
CTTTGGGTGAGAGCGAAAGA+AGG - chr1_1:14734705-14734724 Msa0009890:CDS 50.0%
!!! GAAGAGGGCGTTTTCGGAAT+TGG - chr1_1:14734731-14734750 Msa0009890:CDS 50.0%
!! TGGTTGATTGGTGGCCGTTT+TGG - chr1_1:14734751-14734770 Msa0009890:CDS 50.0%
!! TTGATTGGTGGCCGTTTTGG+AGG - chr1_1:14734754-14734773 Msa0009890:CDS 50.0%
TTACTGAGGCCGATGCGAAT+CGG - chr1_1:14734802-14734821 Msa0009890:intron 50.0%
!! AGCATCCAACCGATTCGCAT+CGG + chr1_1:14734814-14734833 None:intergenic 50.0%
ATCACTCGAGTCCAACCACT+TGG + chr1_1:14735015-14735034 None:intergenic 50.0%
TCTCTAACTAAGGCCCCGTT+TGG + chr1_1:14735246-14735265 None:intergenic 50.0%
TGAAGAAAGGGACAGAGCTG+TGG - chr1_1:14736117-14736136 Msa0009890:intron 50.0%
!! ACCTTCTGGAATTCCCTCCT+TGG - chr1_1:14736225-14736244 Msa0009890:intron 50.0%
ACCAAGGAGGGAATTCCAGA+AGG + chr1_1:14736229-14736248 None:intergenic 50.0%
!! TGAGACTTGGTTCTGCCTCT+CGG + chr1_1:14736672-14736691 None:intergenic 50.0%
GGGGGAATGAGGTGGAAAAA+TGG - chr1_1:14736789-14736808 Msa0009890:intron 50.0%
GGCTGCTTCTCAGATATTCC+AGG + chr1_1:14737451-14737470 None:intergenic 50.0%
CCAGACCAATCCAACAGCTA+CGG + chr1_1:14737742-14737761 None:intergenic 50.0%
!! TTGGGTGGGATTGGTTCTTC+AGG - chr1_1:14737900-14737919 Msa0009890:intron 50.0%
!! GGGATTGGTTCTTCAGGTGT+TGG - chr1_1:14737906-14737925 Msa0009890:intron 50.0%
AGTTTCCTTATCCAGTGCCC+CGG + chr1_1:14738196-14738215 None:intergenic 50.0%
GCAAGAACTTGAGGAGGTTG+TGG - chr1_1:14738577-14738596 Msa0009890:intron 50.0%
TCAGGGGATTCTTCTGACTG+GGG - chr1_1:14739045-14739064 Msa0009890:intron 50.0%
AAGGCTATTGCTGGAGAAGC+CGG - chr1_1:14739303-14739322 Msa0009890:intron 50.0%
AAGTTGCCATGACTGAACGG+AGG - chr1_1:14739808-14739827 Msa0009890:intron 50.0%
GAACAGAGAAGGCCGCATTA+AGG + chr1_1:14739902-14739921 None:intergenic 50.0%
GCGGCCTTCTCTGTTCTATT+CGG - chr1_1:14739906-14739925 Msa0009890:intron 50.0%
CTCGGAGAATACAGATGCAG+TGG - chr1_1:14739992-14740011 Msa0009890:CDS 50.0%
GAGAATACAGATGCAGTGGC+AGG - chr1_1:14739996-14740015 Msa0009890:CDS 50.0%
TGTCTGGACTCATTCCCTTG+TGG + chr1_1:14740222-14740241 None:intergenic 50.0%
!! GGTTTGTTGGAGTTGGTGCT+CGG - chr1_1:14740504-14740523 Msa0009890:intron 50.0%
GGTGCAATGTCTTCTTGGTG+TGG + chr1_1:14740747-14740766 None:intergenic 50.0%
! GGATGGGTTTGAGCAGAATG+AGG - chr1_1:14740783-14740802 Msa0009890:intron 50.0%
TCAATCCAGGTCGTTCTACC+CGG - chr1_1:14741123-14741142 Msa0009890:CDS 50.0%
ATTAACCGGGTAGAACGACC+TGG + chr1_1:14741131-14741150 None:intergenic 50.0%
CGACCACGTACATCTGGATT+TGG + chr1_1:14741211-14741230 None:intergenic 50.0%
CGGCTGTAGGTTTATCATGC+AGG + chr1_1:14741255-14741274 None:intergenic 50.0%
! ATTGAATCCTGGGGTACCAC+GGG + chr1_1:14741302-14741321 None:intergenic 50.0%
! CATTGAATCCTGGGGTACCA+CGG + chr1_1:14741303-14741322 None:intergenic 50.0%
GTGGTACCCCAGGATTCAAT+GGG - chr1_1:14741302-14741321 Msa0009890:intron 50.0%
TGGTACCCCAGGATTCAATG+GGG - chr1_1:14741303-14741322 Msa0009890:intron 50.0%
! CCCTTTCAACACTTTTGGGC+TGG + chr1_1:14742432-14742451 None:intergenic 50.0%
GATGTGCACCGTCGGTATTA+AGG + chr1_1:14742817-14742836 None:intergenic 50.0%
GTGAATTGGATGTGCACCGT+CGG + chr1_1:14742825-14742844 None:intergenic 50.0%
CGGTGCACATCCAATTCACA+AGG - chr1_1:14742826-14742845 Msa0009890:intron 50.0%
!! CCGTGGATCTGCTTTAGGAA+TGG - chr1_1:14742862-14742881 Msa0009890:intron 50.0%
GGTCGGGATAATGTCACAAC+TGG - chr1_1:14742989-14743008 Msa0009890:intron 50.0%
TACCGAGCTTGCGCAATACA+TGG - chr1_1:14743036-14743055 Msa0009890:intron 50.0%
! GCAGTCACGTATTGATGCAG+AGG - chr1_1:14743379-14743398 Msa0009890:intron 50.0%
! CTGAGCTTTTCCTGTTCTGC+AGG - chr1_1:14743508-14743527 Msa0009890:intron 50.0%
TTACTTCTCCCGTATCGGGA+AGG - chr1_1:14743853-14743872 Msa0009890:CDS 50.0%
GGACCTTTGTCATCGTTAGC+AGG + chr1_1:14744119-14744138 None:intergenic 50.0%
GACCCAAGTGTCTCTTAGCA+AGG - chr1_1:14744304-14744323 Msa0009890:five_prime_UTR 50.0%
AATTGGCGCCGTCGTACATG+TGG + chr1_1:14734238-14734257 None:intergenic 55.0%
CGCGTGGGATTGAAGTGATG+AGG + chr1_1:14734417-14734436 None:intergenic 55.0%
GTGCAGAGAAGGGGAGTGAA+GGG + chr1_1:14734456-14734475 None:intergenic 55.0%
AGTGCAGAGAAGGGGAGTGA+AGG + chr1_1:14734457-14734476 None:intergenic 55.0%
TCGGGATTAGGTTCGGAGTG+GGG + chr1_1:14734501-14734520 None:intergenic 55.0%
GTTCGGGATTAGGTTCGGAG+TGG + chr1_1:14734503-14734522 None:intergenic 55.0%
GACAGAGCTGTGGACAGTAG+AGG - chr1_1:14736127-14736146 Msa0009890:intron 55.0%
GAGGCGGTTCCTCCGAAATT+CGG + chr1_1:14736629-14736648 None:intergenic 55.0%
GAGTTGAAACAGCGGGCATC+TGG - chr1_1:14737400-14737419 Msa0009890:intron 55.0%
!! CCGTAGCTGTTGGATTGGTC+TGG - chr1_1:14737739-14737758 Msa0009890:intron 55.0%
ATCGGAAGCTTGGGTGGGAT+TGG - chr1_1:14737891-14737910 Msa0009890:intron 55.0%
GTCATGTTAACCAGTGCCCC+CGG - chr1_1:14738174-14738193 Msa0009890:intron 55.0%
TCATGTTAACCAGTGCCCCC+GGG - chr1_1:14738175-14738194 Msa0009890:intron 55.0%
TTTCCTTATCCAGTGCCCCG+GGG + chr1_1:14738194-14738213 None:intergenic 55.0%
GTTTCCTTATCCAGTGCCCC+GGG + chr1_1:14738195-14738214 None:intergenic 55.0%
CCTTTGGCAGCTTTCCTCCA+AGG + chr1_1:14738634-14738653 None:intergenic 55.0%
CCTTGGAGGAAAGCTGCCAA+AGG - chr1_1:14738631-14738650 Msa0009890:intron 55.0%
! ATTCTTCTGACTGGGGCACC+TGG - chr1_1:14739052-14739071 Msa0009890:intron 55.0%
GGGACCTTGAAGGCTATTGC+TGG - chr1_1:14739294-14739313 Msa0009890:intron 55.0%
!! TCGTGCCGGTTCGGAATTTG+AGG - chr1_1:14739341-14739360 Msa0009890:intron 55.0%
CATCCCACCACATGCTATCC+TGG + chr1_1:14739541-14739560 None:intergenic 55.0%
! CAGGATAGCATGTGGTGGGA+TGG - chr1_1:14739539-14739558 Msa0009890:intron 55.0%
TTGCCATGACTGAACGGAGG+AGG - chr1_1:14739811-14739830 Msa0009890:intron 55.0%
TGCCATGACTGAACGGAGGA+GGG - chr1_1:14739812-14739831 Msa0009890:intron 55.0%
TTCCCTCCTCCGTTCAGTCA+TGG + chr1_1:14739817-14739836 None:intergenic 55.0%
AGATGCAGTGGCAGGGTTGA+CGG - chr1_1:14740004-14740023 Msa0009890:CDS 55.0%
! GATCCAGCTCTAACGAGACC+TGG - chr1_1:14740922-14740941 Msa0009890:intron 55.0%
CTACCAGGTCTCGTTAGAGC+TGG + chr1_1:14740928-14740947 None:intergenic 55.0%
TCTTGCCGACCACGTACATC+TGG + chr1_1:14741217-14741236 None:intergenic 55.0%
CGTGGTACCCCAGGATTCAA+TGG - chr1_1:14741301-14741320 Msa0009890:intron 55.0%
ACCTGCCCCATTGAATCCTG+GGG + chr1_1:14741311-14741330 None:intergenic 55.0%
CACCTGCCCCATTGAATCCT+GGG + chr1_1:14741312-14741331 None:intergenic 55.0%
TCACCTGCCCCATTGAATCC+TGG + chr1_1:14741313-14741332 None:intergenic 55.0%
AAGGCAACAATCATGCCCCG+TGG - chr1_1:14742845-14742864 Msa0009890:intron 55.0%
ATGCCCCGTGGATCTGCTTT+AGG - chr1_1:14742857-14742876 Msa0009890:intron 55.0%
!!! TTGGTGGCCGTTTTGGAGGC+AGG - chr1_1:14734758-14734777 Msa0009890:CDS 60.0%
TGAGGCCGATGCGAATCGGT+TGG - chr1_1:14734806-14734825 Msa0009890:intron 60.0%
AGTGGAGGTGGAGTGCAACC+AGG - chr1_1:14736324-14736343 Msa0009890:intron 60.0%
TGAGAAGCAGCCGTTGCACG+TGG - chr1_1:14737459-14737478 Msa0009890:intron 60.0%
GCAGCCGTTGCACGTGGTTA+TGG - chr1_1:14737465-14737484 Msa0009890:intron 60.0%
CATGTTAACCAGTGCCCCCG+GGG - chr1_1:14738176-14738195 Msa0009890:intron 60.0%
TTCCTTATCCAGTGCCCCGG+GGG + chr1_1:14738193-14738212 None:intergenic 60.0%
ACCCCAGGATTCAATGGGGC+AGG - chr1_1:14741307-14741326 Msa0009890:intron 60.0%
AGGGGAGTGAAGGGAACGCG+CGG + chr1_1:14734447-14734466 None:intergenic 65.0%
! CTGACTGGGGCACCTGGAAC+TGG - chr1_1:14739058-14739077 Msa0009890:intron 65.0%
TGCAGTGGCAGGGTTGACGG+TGG - chr1_1:14740007-14740026 Msa0009890:CDS 65.0%
GCAATAGCCCGTGGTACCCC+AGG - chr1_1:14741292-14741311 Msa0009890:intron 65.0%
TGAAGGGAACGCGCGGGTGG+AGG + chr1_1:14734440-14734459 None:intergenic 70.0%
GAGTGAAGGGAACGCGCGGG+TGG + chr1_1:14734443-14734462 None:intergenic 70.0%
GGGGAGTGAAGGGAACGCGC+GGG + chr1_1:14734446-14734465 None:intergenic 70.0%
!! TGCCCCCGGGGCACTGGATA+AGG - chr1_1:14738188-14738207 Msa0009890:intron 70.0%
TGACGGTGGCTGCTCCGCAG+AGG - chr1_1:14740021-14740040 Msa0009890:intron 70.0%
AACCAGTGCCCCCGGGGCAC+TGG - chr1_1:14738182-14738201 Msa0009890:intron 75.0%
! ATCCAGTGCCCCGGGGGCAC+TGG + chr1_1:14738187-14738206 None:intergenic 75.0%
!! ACGCGCGGGTGGAGGCGCGT+GGG + chr1_1:14734432-14734451 None:intergenic 80.0%
!! AACGCGCGGGTGGAGGCGCG+TGG + chr1_1:14734433-14734452 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 14734224 14744345 14734224 ID=Msa0009890;Name=Msa0009890
chr1_1 mRNA 14734224 14744345 14734224 ID=Msa0009890-mRNA-1;Parent=Msa0009890;Name=Msa0009890-mRNA-1;_AED=0.09;_eAED=0.09;_QI=109|0.93|1|1|1|1|16|412|755
chr1_1 exon 14734224 14734791 14734224 ID=Msa0009890-mRNA-1:exon:5467;Parent=Msa0009890-mRNA-1
chr1_1 exon 14734986 14735039 14734986 ID=Msa0009890-mRNA-1:exon:5466;Parent=Msa0009890-mRNA-1
chr1_1 exon 14735512 14735793 14735512 ID=Msa0009890-mRNA-1:exon:5465;Parent=Msa0009890-mRNA-1
chr1_1 exon 14736980 14737128 14736980 ID=Msa0009890-mRNA-1:exon:5464;Parent=Msa0009890-mRNA-1
chr1_1 exon 14737241 14737370 14737241 ID=Msa0009890-mRNA-1:exon:5463;Parent=Msa0009890-mRNA-1
chr1_1 exon 14737609 14737689 14737609 ID=Msa0009890-mRNA-1:exon:5462;Parent=Msa0009890-mRNA-1
chr1_1 exon 14737765 14737890 14737765 ID=Msa0009890-mRNA-1:exon:5461;Parent=Msa0009890-mRNA-1
chr1_1 exon 14738007 14738064 14738007 ID=Msa0009890-mRNA-1:exon:5460;Parent=Msa0009890-mRNA-1
chr1_1 exon 14739202 14739263 14739202 ID=Msa0009890-mRNA-1:exon:5459;Parent=Msa0009890-mRNA-1
chr1_1 exon 14739470 14739520 14739470 ID=Msa0009890-mRNA-1:exon:5458;Parent=Msa0009890-mRNA-1
chr1_1 exon 14739917 14740036 14739917 ID=Msa0009890-mRNA-1:exon:5457;Parent=Msa0009890-mRNA-1
chr1_1 exon 14740586 14740709 14740586 ID=Msa0009890-mRNA-1:exon:5456;Parent=Msa0009890-mRNA-1
chr1_1 exon 14740809 14740894 14740809 ID=Msa0009890-mRNA-1:exon:5455;Parent=Msa0009890-mRNA-1
chr1_1 exon 14741083 14741175 14741083 ID=Msa0009890-mRNA-1:exon:5454;Parent=Msa0009890-mRNA-1
chr1_1 exon 14742323 14742476 14742323 ID=Msa0009890-mRNA-1:exon:5453;Parent=Msa0009890-mRNA-1
chr1_1 exon 14743695 14744345 14743695 ID=Msa0009890-mRNA-1:exon:5452;Parent=Msa0009890-mRNA-1
chr1_1 five_prime_UTR 14744237 14744345 14744237 ID=Msa0009890-mRNA-1:five_prime_utr;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14743695 14744236 14743695 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14742323 14742476 14742323 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14741083 14741175 14741083 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14740809 14740894 14740809 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14740586 14740709 14740586 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14739917 14740036 14739917 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14739470 14739520 14739470 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14739202 14739263 14739202 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14738007 14738064 14738007 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14737765 14737890 14737765 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14737609 14737689 14737609 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14737241 14737370 14737241 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14736980 14737128 14736980 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14735512 14735793 14735512 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14734986 14735039 14734986 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 CDS 14734636 14734791 14734636 ID=Msa0009890-mRNA-1:cds;Parent=Msa0009890-mRNA-1
chr1_1 three_prime_UTR 14734224 14734635 14734224 ID=Msa0009890-mRNA-1:three_prime_utr;Parent=Msa0009890-mRNA-1
Gene Sequence

>Msa0009890

ATGGCAACACTTCAAGCTTCTCTTCTCTCTAAACCTCTTCTCTTCCCATTCCTCATTCCTAACCCCTCTACTCTTCTTAAACCTCATCACTTCAATCCCACGCGCCTCCACCCGCGCGTTCCCTTCACTCCCCTTCTCTGCACTTTTCAACCCGATACTACACTTCCCCACTCCGAACCTAATCCCGAACCTATCTCCGACGATTCTCCTAACCTAGAACCGTTAAATTCAACTGAAAACGATTCTGTTACGATTCTTGATTCAAATTCTTCGAATGAATCGAATTCGAGATTTGAAAGTGTTGATGAAGAGAAGGTGGAGAGTGGGGAAAAGAAAGATGGGAGATTACCGATAGTGGTGTTTTTGATTGGGCTTTGGGTGAGAGCGAAAGAAGGATTGAAGAGGGCGTTTTCGGAATTGGTTGATTGGTGGCCGTTTTGGAGGCAGGAGAAGAAATTGGCGAAGTTGATTACTGAGGCCGATGCGAATCGGTTGGATGCTGCTAAGCAAACTGCGCTTTTTGTTGAGCTTAATAAGCACAGTCCTGAGTCTGTGATAAAGATATTTGAAGAAAGGGACAGAGCTGTGGACAGTAGAGGAGTTGCAGAATATCTTCGAGCACTAGTGGTCACTAATGCTATTGCAGAATATCTTCCTGATGAGGAATCTGGAAAACCTTCTGGAATTCCCTCCTTGTTGCAAGAGTTGAAACAGCGGGCATCTGGTAACATAGATGAGACTTTTCTGAACCCTGGAATATCTGAGAAGCAGCCGTTGCACGTGGTTATGGTTGATCAGAAAGTATCAAACAAGTCACGTTTCGCACAAGAGCTTATCTCAACTATTTTGTTTACCGTAGCTGTTGGATTGGTCTGGTTTATGGGTGCTGCTGCACTTCAAAAATACATCGGAAGCTTGGGTGGGATTGGTTCTTCAGGTGTTGGTTCAAGTTCATCTTATACCCCAAAGGAGCTAAACAAGGAAGTGATGCCAGAAAAGAATGTAAAAACTTTTAAGGATGTGAAAGGTTGTGATGATGCAAAGCAAGAACTTGAGGAGGTTGTGGAGTACCTAAAAAATCCAGCTAAATTTACTCGCCTTGGAGGAAAGCTGCCAAAGGGGATTCTTCTGACTGGGGCACCTGGAACTGGAAAAACTCTGCTAGCCAAGGCTATTGCTGGAGAAGCCGGTGTTCCATTTTTCTATCGTGCCGGTTCGGAATTTGAGGAGATGTTTGTTGGAGTTGGTGCTCGGCGTGTAAGATCGTTATTTCAAGCAGCCAAAAAGAAGGCTCCTTGCATTATTTTCATTGATGAAATTGATGCCGTTGGATCAACTAGGAAACAGTGGGAGGGCCACACCAAGAAGACATTGCACCAACTTCTTGTTGAAATGGATGGGTTTGAGCAGAATGAGGGAATAATATTAATGGCTGCAACAAACTTGCCTGATATTCTTGATCCAGCTCTAACGAGACCTGGTAGATTTGATCGACATATTGTTGTACCAAATCCAGATGTACGTGGTCGGCAAGAAATATTGGAACTCTACCTGCATGATAAACCTACAGCCGATAATGTAGATATTAAAGCAATAGCCCGTGGTACCCCAGGATTCAATGGGGCAGATCTGGCAAACCTGGTGAACATTGCTGCTATTAAAGCTGCGGTTGAAGGTGCAGAGAAATTAACAGCTTCTCAGTTGGAGTTTGCAAAAGACCGAATAATTATGGGTACAGAGCGAAAAACAATGTTTGTATCGGAGGAGTCAAAAAAGCTTACTGCTTATCATGAGAGCGGCCATGCAATTGTTGCCCTTAATACCGACGGTGCACATCCAATTCACAAGGCAACAATCATGCCCCGTGGATCTGCTTTAGGAATGGTTACTCAGCTTCCCTCAAATGATGAGACATCAATAAGTAAGAAGCAGTTGTTAGCTCGTCTTGATGTTTGTATGGGAGGACGAGTTGCAGAAGAACTTATCTTTGGTCGGGATAATGTCACAACTGGAGCTAGTAGTGATCTTCAATCAGCTACCGAGCTTGCGCAATACATGGTTGTTAAACTCCTTAGAGATGCATATGATCGTGTGAAAGCTCTTCTGAAAAAGCATGAGAAGGCATTACATACGCTTGCAAATGCATTATTAGAGTGTGAGACACTTAGTGCAGAAGAAATCAGACGATTACTTCTCCCGTATCGGGAAGGAAAACTTCCAGAACAACAGGAACAAGAAGAAGCAGAAGGGGATCTTGTATTGGCGTAA
Protein sequence

>Msa0009890

MATLQASLLSKPLLFPFLIPNPSTLLKPHHFNPTRLHPRVPFTPLLCTFQPDTTLPHSEPNPEPISDDSPNLEPLNSTENDSVTILDSNSSNESNSRFESVDEEKVESGEKKDGRLPIVVFLIGLWVRAKEGLKRAFSELVDWWPFWRQEKKLAKLITEADANRLDAAKQTALFVELNKHSPESVIKIFEERDRAVDSRGVAEYLRALVVTNAIAEYLPDEESGKPSGIPSLLQELKQRASGNIDETFLNPGISEKQPLHVVMVDQKVSNKSRFAQELISTILFTVAVGLVWFMGAAALQKYIGSLGGIGSSGVGSSSSYTPKELNKEVMPEKNVKTFKDVKGCDDAKQELEEVVEYLKNPAKFTRLGGKLPKGILLTGAPGTGKTLLAKAIAGEAGVPFFYRAGSEFEEMFVGVGARRVRSLFQAAKKKAPCIIFIDEIDAVGSTRKQWEGHTKKTLHQLLVEMDGFEQNEGIILMAATNLPDILDPALTRPGRFDRHIVVPNPDVRGRQEILELYLHDKPTADNVDIKAIARGTPGFNGADLANLVNIAAIKAAVEGAEKLTASQLEFAKDRIIMGTERKTMFVSEESKKLTAYHESGHAIVALNTDGAHPIHKATIMPRGSALGMVTQLPSNDETSISKKQLLARLDVCMGGRVAEELIFGRDNVTTGASSDLQSATELAQYMVVKLLRDAYDRVKALLKKHEKALHTLANALLECETLSAEEIRRLLLPYREGKLPEQQEQEEAEGDLVLA*