Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193200 | XP_003593680.1 | 97.576 | 165 | 4 | 0 | 1 | 165 | 1 | 165 | 3.13e-108 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193200 | sp|Q13442|HAP28_HUMAN | 54.545 | 77 | 35 | 0 | 62 | 138 | 73 | 149 | 1.40e-19 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193200 | G7IFI0 | 97.576 | 165 | 4 | 0 | 1 | 165 | 1 | 165 | 1.50e-108 | 315 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0193200 | 0.803235 | 3.840234e-49 | -8.615850e-47 |
| Msa0008850 | Msa0193200 | 0.807272 | 5.482115e-50 | -8.615850e-47 |
| Msa0012740 | Msa0193200 | 0.852279 | 5.122510e-61 | -8.615850e-47 |
| Msa0021980 | Msa0193200 | 0.807939 | 3.956058e-50 | -8.615850e-47 |
| Msa0026120 | Msa0193200 | 0.804160 | 2.468136e-49 | -8.615850e-47 |
| Msa0030030 | Msa0193200 | 0.853369 | 2.500917e-61 | -8.615850e-47 |
| Msa0032040 | Msa0193200 | 0.831185 | 1.926495e-55 | -8.615850e-47 |
| Msa0036150 | Msa0193200 | 0.807873 | 4.085987e-50 | -8.615850e-47 |
| Msa0038310 | Msa0193200 | 0.801817 | 7.527739e-49 | -8.615850e-47 |
| Msa0039200 | Msa0193200 | 0.849200 | 3.766282e-60 | -8.615850e-47 |
| Msa0040190 | Msa0193200 | 0.846470 | 2.128190e-59 | -8.615850e-47 |
| Msa0047760 | Msa0193200 | 0.816802 | 4.584010e-52 | -8.615850e-47 |
| Msa0051100 | Msa0193200 | 0.805294 | 1.431149e-49 | -8.615850e-47 |
| Msa0053480 | Msa0193200 | 0.857531 | 1.531480e-62 | -8.615850e-47 |
| Msa0056550 | Msa0193200 | 0.841848 | 3.705644e-58 | -8.615850e-47 |
| Msa0056720 | Msa0193200 | 0.833505 | 5.131352e-56 | -8.615850e-47 |
| Msa0070090 | Msa0193200 | 0.816963 | 4.218124e-52 | -8.615850e-47 |
| Msa0072710 | Msa0193200 | 0.802949 | 4.399878e-49 | -8.615850e-47 |
| Msa0074760 | Msa0193200 | 0.808537 | 2.949788e-50 | -8.615850e-47 |
| Msa0075850 | Msa0193200 | 0.829235 | 5.766151e-55 | -8.615850e-47 |
| Msa0077330 | Msa0193200 | 0.845977 | 2.899556e-59 | -8.615850e-47 |
| Msa0084550 | Msa0193200 | 0.809747 | 1.623593e-50 | -8.615850e-47 |
| Msa0085240 | Msa0193200 | 0.812800 | 3.533221e-51 | -8.615850e-47 |
| Msa0086820 | Msa0193200 | 0.850013 | 2.233811e-60 | -8.615850e-47 |
| Msa0087880 | Msa0193200 | 0.842807 | 2.063399e-58 | -8.615850e-47 |
| Msa0095240 | Msa0193200 | 0.809361 | 1.965363e-50 | -8.615850e-47 |
| Msa0103060 | Msa0193200 | 0.823281 | 1.506822e-53 | -8.615850e-47 |
| Msa0120980 | Msa0193200 | 0.806770 | 6.998905e-50 | -8.615850e-47 |
| Msa0130620 | Msa0193200 | 0.810138 | 1.337795e-50 | -8.615850e-47 |
| Msa0133670 | Msa0193200 | 0.845884 | 3.073649e-59 | -8.615850e-47 |
| Msa0133880 | Msa0193200 | 0.850149 | 2.045930e-60 | -8.615850e-47 |
| Msa0134550 | Msa0193200 | 0.832113 | 1.137631e-55 | -8.615850e-47 |
| Msa0140910 | Msa0193200 | 0.823745 | 1.173968e-53 | -8.615850e-47 |
| Msa0143210 | Msa0193200 | 0.805118 | 1.557925e-49 | -8.615850e-47 |
| Msa0155030 | Msa0193200 | 0.808987 | 2.363894e-50 | -8.615850e-47 |
| Msa0156780 | Msa0193200 | 0.831459 | 1.649392e-55 | -8.615850e-47 |
| Msa0164630 | Msa0193200 | 0.813531 | 2.442189e-51 | -8.615850e-47 |
| Msa0166580 | Msa0193200 | 0.816883 | 4.395061e-52 | -8.615850e-47 |
| Msa0169960 | Msa0193200 | 0.848030 | 7.945102e-60 | -8.615850e-47 |
| Msa0175480 | Msa0193200 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
| Msa0176530 | Msa0193200 | 0.810066 | 1.386326e-50 | -8.615850e-47 |
| Msa0177570 | Msa0193200 | 0.805198 | 1.499070e-49 | -8.615850e-47 |
| Msa0181290 | Msa0193200 | 0.856435 | 3.223810e-62 | -8.615850e-47 |
| Msa0181410 | Msa0193200 | 0.802316 | 5.945304e-49 | -8.615850e-47 |
| Msa0184030 | Msa0193200 | 0.805628 | 1.217824e-49 | -8.615850e-47 |
| Msa0184120 | Msa0193200 | 0.850211 | 1.966306e-60 | -8.615850e-47 |
| Msa0185110 | Msa0193200 | 0.842933 | 1.910199e-58 | -8.615850e-47 |
| Msa0189050 | Msa0193200 | 0.804405 | 2.194297e-49 | -8.615850e-47 |
| Msa0190980 | Msa0193200 | 0.811107 | 8.257900e-51 | -8.615850e-47 |
| Msa0193200 | Msa0206600 | 0.827442 | 1.561215e-54 | -8.615850e-47 |
| Msa0193200 | Msa0211010 | 0.855956 | 4.453930e-62 | -8.615850e-47 |
| Msa0193200 | Msa0212960 | 0.802829 | 4.659370e-49 | -8.615850e-47 |
| Msa0193200 | Msa0213090 | 0.833455 | 5.280279e-56 | -8.615850e-47 |
| Msa0193200 | Msa0221860 | 0.808463 | 3.059632e-50 | -8.615850e-47 |
| Msa0193200 | Msa0231310 | 0.807006 | 6.240714e-50 | -8.615850e-47 |
| Msa0193200 | Msa0251140 | 0.814219 | 1.722646e-51 | -8.615850e-47 |
| Msa0193200 | Msa0251670 | 0.841319 | 5.108680e-58 | -8.615850e-47 |
| Msa0193200 | Msa0253370 | 0.846941 | 1.582649e-59 | -8.615850e-47 |
| Msa0193200 | Msa0256170 | 0.825029 | 5.857692e-54 | -8.615850e-47 |
| Msa0193200 | Msa0268460 | 0.818571 | 1.828852e-52 | -8.615850e-47 |
| Msa0193200 | Msa0269100 | 0.827476 | 1.532301e-54 | -8.615850e-47 |
| Msa0193200 | Msa0272420 | 0.820403 | 6.988165e-53 | -8.615850e-47 |
| Msa0193200 | Msa0273060 | 0.906897 | 9.073680e-81 | -8.615850e-47 |
| Msa0193200 | Msa0290650 | 0.831473 | 1.636162e-55 | -8.615850e-47 |
| Msa0193200 | Msa0295840 | 0.803159 | 3.981075e-49 | -8.615850e-47 |
| Msa0193200 | Msa0306130 | 0.816364 | 5.746136e-52 | -8.615850e-47 |
| Msa0193200 | Msa0309160 | 0.803253 | 3.807668e-49 | -8.615850e-47 |
| Msa0193200 | Msa0311620 | 0.801934 | 7.122244e-49 | -8.615850e-47 |
| Msa0193200 | Msa0312570 | 0.811842 | 5.719948e-51 | -8.615850e-47 |
| Msa0193200 | Msa0312780 | 0.823616 | 1.258617e-53 | -8.615850e-47 |
| Msa0193200 | Msa0323630 | 0.819650 | 1.039077e-52 | -8.615850e-47 |
| Msa0193200 | Msa0330270 | 0.822117 | 2.812378e-53 | -8.615850e-47 |
| Msa0193200 | Msa0330400 | 0.851724 | 7.365107e-61 | -8.615850e-47 |
| Msa0193200 | Msa0336270 | 0.840325 | 9.308405e-58 | -8.615850e-47 |
| Msa0193200 | Msa0344240 | 0.804196 | 2.425544e-49 | -8.615850e-47 |
| Msa0193200 | Msa0365360 | 0.856473 | 3.141137e-62 | -8.615850e-47 |
| Msa0193200 | Msa0370510 | 0.808807 | 2.583198e-50 | -8.615850e-47 |
| Msa0193200 | Msa0371610 | 0.820170 | 7.900804e-53 | -8.615850e-47 |
| Msa0193200 | Msa0372250 | 0.803317 | 3.693117e-49 | -8.615850e-47 |
| Msa0193200 | Msa0379720 | 0.801079 | 1.066478e-48 | -8.615850e-47 |
| Msa0193200 | Msa0390950 | 0.820399 | 7.002088e-53 | -8.615850e-47 |
| Msa0193200 | Msa0398620 | 0.843841 | 1.093309e-58 | -8.615850e-47 |
| Msa0193200 | Msa0402640 | 0.802976 | 4.345369e-49 | -8.615850e-47 |
| Msa0193200 | Msa0411000 | 0.823330 | 1.468178e-53 | -8.615850e-47 |
| Msa0193200 | Msa0413040 | 0.836896 | 7.151716e-57 | -8.615850e-47 |
| Msa0193200 | Msa0417130 | 0.821255 | 4.450040e-53 | -8.615850e-47 |
| Msa0193200 | Msa0418000 | 0.810764 | 9.799276e-51 | -8.615850e-47 |
| Msa0193200 | Msa0421100 | 0.815652 | 8.283946e-52 | -8.615850e-47 |
| Msa0193200 | Msa0423600 | 0.843995 | 9.944172e-59 | -8.615850e-47 |
| Msa0193200 | Msa0427050 | 0.836229 | 1.057563e-56 | -8.615850e-47 |
| Msa0193200 | Msa0429100 | 0.814157 | 1.777621e-51 | -8.615850e-47 |
| Msa0193200 | Msa0429130 | 0.812633 | 3.842518e-51 | -8.615850e-47 |
| Msa0193200 | Msa0431940 | 0.807005 | 6.244544e-50 | -8.615850e-47 |
| Msa0193200 | Msa0440110 | 0.821013 | 5.059540e-53 | -8.615850e-47 |
| Msa0193200 | Msa0457370 | 0.823643 | 1.240177e-53 | -8.615850e-47 |
| Msa0193200 | Msa0459120 | 0.825741 | 3.972460e-54 | -8.615850e-47 |
| Msa0193200 | Msa0463960 | 0.813551 | 2.417486e-51 | -8.615850e-47 |
| Msa0193200 | Msa0465050 | 0.804357 | 2.245540e-49 | -8.615850e-47 |
| Msa0193200 | Msa0466100 | 0.807147 | 5.826052e-50 | -8.615850e-47 |
| Msa0193200 | Msa0470650 | 0.819621 | 1.054842e-52 | -8.615850e-47 |
| Msa0193200 | Msa0471080 | 0.802295 | 6.002375e-49 | -8.615850e-47 |
| Msa0193200 | Msa0471090 | 0.806210 | 9.188568e-50 | -8.615850e-47 |
| Msa0193200 | Msa0475740 | 0.811938 | 5.450546e-51 | -8.615850e-47 |
| Msa0193200 | Msa0475830 | 0.845418 | 4.112170e-59 | -8.615850e-47 |
| Msa0193200 | Msa0498830 | 0.803499 | 3.386317e-49 | -8.615850e-47 |
| Msa0193200 | Msa0504630 | 0.815498 | 8.962482e-52 | -8.615850e-47 |
| Msa0193200 | Msa0505660 | 0.802422 | 5.652668e-49 | -8.615850e-47 |
| Msa0193200 | Msa0511890 | 0.836486 | 9.097424e-57 | -8.615850e-47 |
| Msa0193200 | Msa0513500 | 0.822599 | 2.173689e-53 | -8.615850e-47 |
| Msa0193200 | Msa0514390 | 0.811898 | 5.559797e-51 | -8.615850e-47 |
| Msa0193200 | Msa0515680 | 0.802626 | 5.130603e-49 | -8.615850e-47 |
| Msa0193200 | Msa0516480 | 0.804963 | 1.678363e-49 | -8.615850e-47 |
| Msa0193200 | Msa0526570 | 0.821284 | 4.382174e-53 | -8.615850e-47 |
| Msa0193200 | Msa0558890 | 0.801398 | 9.177419e-49 | -8.615850e-47 |
| Msa0193200 | Msa0563140 | 0.824268 | 8.849109e-54 | -8.615850e-47 |
| Msa0193200 | Msa0566010 | 0.806529 | 7.870888e-50 | -8.615850e-47 |
| Msa0193200 | Msa0568490 | 0.825247 | 5.202793e-54 | -8.615850e-47 |
| Msa0193200 | Msa0568810 | 0.806657 | 7.395010e-50 | -8.615850e-47 |
| Msa0193200 | Msa0587060 | 0.811830 | 5.754527e-51 | -8.615850e-47 |
| Msa0193200 | Msa0595240 | 0.800299 | 1.538105e-48 | -8.615850e-47 |
| Msa0193200 | Msa0596230 | 0.800842 | 1.192022e-48 | -8.615850e-47 |
| Msa0193200 | Msa0597300 | 0.806809 | 6.869582e-50 | -8.615850e-47 |
| Msa0193200 | Msa0598250 | 0.813696 | 2.246180e-51 | -8.615850e-47 |
| Msa0193200 | Msa0606060 | 0.826387 | 2.789046e-54 | -8.615850e-47 |
| Msa0193200 | Msa0607440 | 0.823530 | 1.318074e-53 | -8.615850e-47 |
| Msa0193200 | Msa0618260 | 0.811536 | 6.666825e-51 | -8.615850e-47 |
| Msa0193200 | Msa0622390 | 0.801889 | 7.277568e-49 | -8.615850e-47 |
| Msa0193200 | Msa0626890 | 0.827099 | 1.885888e-54 | -8.615850e-47 |
| Msa0193200 | Msa0635470 | 0.847805 | 9.167187e-60 | -8.615850e-47 |
| Msa0193200 | Msa0635990 | 0.816591 | 5.110107e-52 | -8.615850e-47 |
| Msa0193200 | Msa0639030 | 0.805442 | 1.332533e-49 | -8.615850e-47 |
| Msa0193200 | Msa0647000 | 0.834134 | 3.571634e-56 | -8.615850e-47 |
| Msa0193200 | Msa0653710 | 0.801407 | 9.136723e-49 | -8.615850e-47 |
| Msa0193200 | Msa0657820 | 0.825306 | 5.036379e-54 | -8.615850e-47 |
| Msa0193200 | Msa0657860 | 0.830535 | 2.780664e-55 | -8.615850e-47 |
| Msa0193200 | Msa0668630 | 0.810197 | 1.299508e-50 | -8.615850e-47 |
| Msa0193200 | Msa0685880 | 0.824543 | 7.627018e-54 | -8.615850e-47 |
| Msa0193200 | Msa0686610 | 0.815012 | 1.149860e-51 | -8.615850e-47 |
| Msa0193200 | Msa0687320 | 0.840837 | 6.834196e-58 | -8.615850e-47 |
| Msa0193200 | Msa0714020 | 0.830475 | 2.875885e-55 | -8.615850e-47 |
| Msa0193200 | Msa0714160 | 0.826437 | 2.713528e-54 | -8.615850e-47 |
| Msa0193200 | Msa0714200 | 0.802883 | 4.541849e-49 | -8.615850e-47 |
| Msa0193200 | Msa0721150 | 0.822772 | 1.981294e-53 | -8.615850e-47 |
| Msa0193200 | Msa0726610 | 0.806430 | 8.257686e-50 | -8.615850e-47 |
| Msa0193200 | Msa0736930 | 0.820814 | 5.620744e-53 | -8.615850e-47 |
| Msa0193200 | Msa0738600 | 0.836256 | 1.041255e-56 | -8.615850e-47 |
| Msa0193200 | Msa0739610 | 0.827649 | 1.392183e-54 | -8.615850e-47 |
| Msa0193200 | Msa0755590 | 0.810756 | 9.841363e-51 | -8.615850e-47 |
| Msa0193200 | Msa0756440 | 0.814289 | 1.661747e-51 | -8.615850e-47 |
| Msa0193200 | Msa0756480 | 0.817972 | 2.498195e-52 | -8.615850e-47 |
| Msa0193200 | Msa0761760 | 0.826708 | 2.338452e-54 | -8.615850e-47 |
| Msa0193200 | Msa0766880 | 0.814921 | 1.204237e-51 | -8.615850e-47 |
| Msa0193200 | Msa0778030 | 0.831425 | 1.681558e-55 | -8.615850e-47 |
| Msa0193200 | Msa0778580 | 0.801046 | 1.083006e-48 | -8.615850e-47 |
| Msa0193200 | Msa0782330 | 0.810092 | 1.369028e-50 | -8.615850e-47 |
| Msa0193200 | Msa0804060 | 0.815832 | 7.553472e-52 | -8.615850e-47 |
| Msa0193200 | Msa0804340 | 0.820153 | 7.970686e-53 | -8.615850e-47 |
| Msa0193200 | Msa0815380 | 0.862023 | 6.797635e-64 | -8.615850e-47 |
| Msa0193200 | Msa0815950 | 0.817837 | 2.680218e-52 | -8.615850e-47 |
| Msa0193200 | Msa0818950 | 0.841020 | 6.121356e-58 | -8.615850e-47 |
| Msa0193200 | Msa0834160 | 0.811212 | 7.837458e-51 | -8.615850e-47 |
| Msa0193200 | Msa0835510 | 0.821308 | 4.326615e-53 | -8.615850e-47 |
| Msa0193200 | Msa0835550 | 0.834669 | 2.622902e-56 | -8.615850e-47 |
| Msa0193200 | Msa0836200 | 0.820837 | 5.553389e-53 | -8.615850e-47 |
| Msa0193200 | Msa0839730 | 0.816294 | 5.954951e-52 | -8.615850e-47 |
| Msa0193200 | Msa0841980 | 0.804343 | 2.260513e-49 | -8.615850e-47 |
| Msa0193200 | Msa0842240 | 0.814696 | 1.350845e-51 | -8.615850e-47 |
| Msa0193200 | Msa0842270 | 0.811170 | 8.004320e-51 | -8.615850e-47 |
| Msa0193200 | Msa0855520 | 0.871560 | 6.228345e-67 | -8.615850e-47 |
| Msa0193200 | Msa0860270 | 0.820565 | 6.413048e-53 | -8.615850e-47 |
| Msa0193200 | Msa0868040 | 0.813372 | 2.645950e-51 | -8.615850e-47 |
| Msa0193200 | Msa0882340 | 0.804094 | 2.547211e-49 | -8.615850e-47 |
| Msa0193200 | Msa0883410 | 0.812889 | 3.377119e-51 | -8.615850e-47 |
| Msa0193200 | Msa0883430 | 0.830484 | 2.861582e-55 | -8.615850e-47 |
| Msa0193200 | Msa0883660 | 0.817487 | 3.214170e-52 | -8.615850e-47 |
| Msa0193200 | Msa0883670 | 0.810520 | 1.106545e-50 | -8.615850e-47 |
| Msa0193200 | Msa0883690 | 0.803029 | 4.235881e-49 | -8.615850e-47 |
| Msa0193200 | Msa0883700 | 0.839738 | 1.324335e-57 | -8.615850e-47 |
| Msa0193200 | Msa0887000 | 0.850615 | 1.513868e-60 | -8.615850e-47 |
| Msa0193200 | Msa0895860 | 0.837691 | 4.475558e-57 | -8.615850e-47 |
| Msa0193200 | Msa0924970 | 0.803446 | 3.473063e-49 | -8.615850e-47 |
| Msa0193200 | Msa0930990 | 0.804975 | 1.668650e-49 | -8.615850e-47 |
| Msa0193200 | Msa0964680 | 0.813280 | 2.772960e-51 | -8.615850e-47 |
| Msa0193200 | Msa0973130 | 0.810750 | 9.868156e-51 | -8.615850e-47 |
| Msa0193200 | Msa0973230 | 0.814362 | 1.601662e-51 | -8.615850e-47 |
| Msa0193200 | Msa0981300 | 0.816196 | 6.263670e-52 | -8.615850e-47 |
| Msa0193200 | Msa0984840 | 0.816781 | 4.632933e-52 | -8.615850e-47 |
| Msa0193200 | Msa0984850 | 0.841497 | 4.584983e-58 | -8.615850e-47 |
| Msa0193200 | Msa0988500 | 0.814492 | 1.499171e-51 | -8.615850e-47 |
| Msa0193200 | Msa0998940 | 0.800854 | 1.185681e-48 | -8.615850e-47 |
| Msa0193200 | Msa1008960 | 0.833938 | 3.999792e-56 | -8.615850e-47 |
| Msa0193200 | Msa1016110 | 0.822898 | 1.851751e-53 | -8.615850e-47 |
| Msa0193200 | Msa1016130 | 0.828758 | 7.524154e-55 | -8.615850e-47 |
| Msa0193200 | Msa1028720 | 0.803447 | 3.471654e-49 | -8.615850e-47 |
| Msa0193200 | Msa1031220 | 0.829348 | 5.414092e-55 | -8.615850e-47 |
| Msa0193200 | Msa1032350 | 0.810266 | 1.255554e-50 | -8.615850e-47 |
| Msa0193200 | Msa1033160 | 0.807918 | 3.996587e-50 | -8.615850e-47 |
| Msa0193200 | Msa1033670 | 0.821736 | 3.445421e-53 | -8.615850e-47 |
| Msa0193200 | Msa1038820 | 0.835293 | 1.825979e-56 | -8.615850e-47 |
| Msa0193200 | Msa1050320 | 0.824120 | 9.585021e-54 | -8.615850e-47 |
| Msa0193200 | Msa1067710 | 0.800357 | 1.496877e-48 | -8.615850e-47 |
| Msa0193200 | Msa1079610 | 0.834497 | 2.896387e-56 | -8.615850e-47 |
| Msa0193200 | Msa1081600 | 0.837313 | 5.595747e-57 | -8.615850e-47 |
| Msa0193200 | Msa1083850 | 0.817965 | 2.508575e-52 | -8.615850e-47 |
| Msa0193200 | Msa1086520 | 0.804500 | 2.096875e-49 | -8.615850e-47 |
| Msa0193200 | Msa1086690 | 0.815604 | 8.488571e-52 | -8.615850e-47 |
| Msa0193200 | Msa1087000 | 0.804057 | 2.592706e-49 | -8.615850e-47 |
| Msa0193200 | Msa1093390 | 0.825236 | 5.233388e-54 | -8.615850e-47 |
| Msa0193200 | Msa1101480 | 0.810926 | 9.039946e-51 | -8.615850e-47 |
| Msa0193200 | Msa1108780 | 0.834944 | 2.236171e-56 | -8.615850e-47 |
| Msa0193200 | Msa1113210 | 0.817875 | 2.628158e-52 | -8.615850e-47 |
| Msa0193200 | Msa1120540 | 0.815102 | 1.097861e-51 | -8.615850e-47 |
| Msa0193200 | Msa1124440 | 0.824101 | 9.688365e-54 | -8.615850e-47 |
| Msa0193200 | Msa1125100 | 0.808649 | 2.791312e-50 | -8.615850e-47 |
| Msa0193200 | Msa1125150 | 0.805932 | 1.051082e-49 | -8.615850e-47 |
| Msa0193200 | Msa1151970 | 0.803778 | 2.963599e-49 | -8.615850e-47 |
| Msa0193200 | Msa1161160 | 0.833682 | 4.634066e-56 | -8.615850e-47 |
| Msa0193200 | Msa1161520 | 0.859467 | 4.053569e-63 | -8.615850e-47 |
| Msa0193200 | Msa1166370 | 0.835761 | 1.389924e-56 | -8.615850e-47 |
| Msa0193200 | Msa1182400 | 0.803122 | 4.053380e-49 | -8.615850e-47 |
| Msa0193200 | Msa1184050 | 0.803579 | 3.258538e-49 | -8.615850e-47 |
| Msa0193200 | Msa1186010 | 0.810262 | 1.258269e-50 | -8.615850e-47 |
| Msa0193200 | Msa1188380 | 0.801600 | 8.342633e-49 | -8.615850e-47 |
| Msa0193200 | Msa1188820 | 0.808660 | 2.777437e-50 | -8.615850e-47 |
| Msa0193200 | Msa1190820 | 0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0193200 | Msa1191390 | 0.821005 | 5.081028e-53 | -8.615850e-47 |
| Msa0193200 | Msa1201610 | 0.825992 | 3.463049e-54 | -8.615850e-47 |
| Msa0193200 | Msa1203840 | 0.800283 | 1.549934e-48 | -8.615850e-47 |
| Msa0193200 | Msa1204110 | 0.806929 | 6.478662e-50 | -8.615850e-47 |
| Msa0193200 | Msa1208070 | 0.819034 | 1.435676e-52 | -8.615850e-47 |
| Msa0193200 | Msa1208250 | 0.820943 | 5.250438e-53 | -8.615850e-47 |
| Msa0193200 | Msa1208710 | 0.843939 | 1.028872e-58 | -8.615850e-47 |
| Msa0193200 | Msa1211020 | 0.807201 | 5.674239e-50 | -8.615850e-47 |
| Msa0193200 | Msa1211370 | 0.820636 | 6.177783e-53 | -8.615850e-47 |
| Msa0193200 | Msa1212740 | 0.819298 | 1.250079e-52 | -8.615850e-47 |
| Msa0193200 | Msa1221570 | -0.802867 | 4.575166e-49 | -8.615850e-47 |
| Msa0193200 | Msa1223510 | 0.814457 | 1.526103e-51 | -8.615850e-47 |
| Msa0193200 | Msa1229710 | 0.821083 | 4.875601e-53 | -8.615850e-47 |
| Msa0193200 | Msa1230190 | 0.801725 | 7.863124e-49 | -8.615850e-47 |
| Msa0193200 | Msa1231520 | 0.838430 | 2.889392e-57 | -8.615850e-47 |
| Msa0193200 | Msa1233770 | 0.833763 | 4.424881e-56 | -8.615850e-47 |
| Msa0193200 | Msa1237260 | 0.812848 | 3.448568e-51 | -8.615850e-47 |
| Msa0193200 | Msa1242990 | 0.812109 | 5.001984e-51 | -8.615850e-47 |
| Msa0193200 | Msa1244300 | 0.802074 | 6.666215e-49 | -8.615850e-47 |
| Msa0193200 | Msa1244830 | 0.802039 | 6.779252e-49 | -8.615850e-47 |
| Msa0193200 | Msa1245210 | 0.816463 | 5.459503e-52 | -8.615850e-47 |
| Msa0193200 | Msa1254470 | 0.835793 | 1.364515e-56 | -8.615850e-47 |
| Msa0193200 | Msa1258950 | 0.844340 | 8.033095e-59 | -8.615850e-47 |
| Msa0193200 | Msa1264140 | 0.820922 | 5.310614e-53 | -8.615850e-47 |
| Msa0193200 | Msa1274310 | 0.807695 | 4.458740e-50 | -8.615850e-47 |
| Msa0193200 | Msa1276080 | 0.831983 | 1.224704e-55 | -8.615850e-47 |
| Msa0193200 | Msa1279240 | 0.810112 | 1.355012e-50 | -8.615850e-47 |
| Msa0193200 | Msa1289340 | 0.811261 | 7.649739e-51 | -8.615850e-47 |
| Msa0193200 | Msa1294520 | 0.804939 | 1.698009e-49 | -8.615850e-47 |
| Msa0193200 | Msa1304850 | 0.825799 | 3.848233e-54 | -8.615850e-47 |
| Msa0193200 | Msa1308460 | 0.818841 | 1.588212e-52 | -8.615850e-47 |
| Msa0193200 | Msa1317710 | 0.814870 | 1.236149e-51 | -8.615850e-47 |
| Msa0193200 | Msa1319710 | 0.800754 | 1.242594e-48 | -8.615850e-47 |
| Msa0193200 | Msa1323920 | 0.818956 | 1.495130e-52 | -8.615850e-47 |
| Msa0193200 | Msa1337190 | 0.818499 | 1.898436e-52 | -8.615850e-47 |
| Msa0193200 | Msa1340620 | 0.845197 | 4.720204e-59 | -8.615850e-47 |
| Msa0193200 | Msa1343770 | 0.809169 | 2.161363e-50 | -8.615850e-47 |
| Msa0193200 | Msa1354850 | 0.814003 | 1.921643e-51 | -8.615850e-47 |
| Msa0193200 | Msa1355260 | 0.802759 | 4.816565e-49 | -8.615850e-47 |
| Msa0193200 | Msa1356730 | 0.804161 | 2.466972e-49 | -8.615850e-47 |
| Msa0193200 | Msa1357380 | 0.824597 | 7.404031e-54 | -8.615850e-47 |
| Msa0193200 | Msa1360380 | 0.813244 | 2.823246e-51 | -8.615850e-47 |
| Msa0193200 | Msa1366700 | 0.825665 | 4.140405e-54 | -8.615850e-47 |
| Msa0193200 | Msa1368660 | 0.801144 | 1.034061e-48 | -8.615850e-47 |
| Msa0193200 | Msa1373950 | 0.805378 | 1.373927e-49 | -8.615850e-47 |
| Msa0193200 | Msa1379370 | 0.811984 | 5.325664e-51 | -8.615850e-47 |
| Msa0193200 | Msa1384980 | 0.802552 | 5.313572e-49 | -8.615850e-47 |
| Msa0193200 | Msa1385940 | 0.811916 | 5.509171e-51 | -8.615850e-47 |
| Msa0193200 | Msa1386020 | 0.817109 | 3.909904e-52 | -8.615850e-47 |
| Msa0193200 | Msa1386190 | 0.800002 | 1.767526e-48 | -8.615850e-47 |
| Msa0193200 | Msa1386520 | 0.803706 | 3.066559e-49 | -8.615850e-47 |
| Msa0193200 | Msa1387090 | 0.835316 | 1.801116e-56 | -8.615850e-47 |
| Msa0193200 | Msa1388230 | 0.824654 | 7.178220e-54 | -8.615850e-47 |
| Msa0193200 | Msa1390410 | 0.805823 | 1.107989e-49 | -8.615850e-47 |
| Msa0193200 | Msa1395640 | 0.801998 | 6.909813e-49 | -8.615850e-47 |
| Msa0193200 | Msa1397110 | 0.804290 | 2.318596e-49 | -8.615850e-47 |
| Msa0193200 | Msa1397540 | 0.846962 | 1.562095e-59 | -8.615850e-47 |
| Msa0193200 | Msa1403900 | 0.804570 | 2.027441e-49 | -8.615850e-47 |
| Msa0193200 | Msa1405470 | 0.826423 | 2.734898e-54 | -8.615850e-47 |
| Msa0193200 | Msa1408190 | 0.827688 | 1.362476e-54 | -8.615850e-47 |
| Msa0193200 | Msa1409520 | 0.814140 | 1.792856e-51 | -8.615850e-47 |
| Msa0193200 | Msa1413880 | 0.813260 | 2.801268e-51 | -8.615850e-47 |
| Msa0193200 | Msa1415120 | 0.819185 | 1.326375e-52 | -8.615850e-47 |
| Msa0193200 | Msa1428440 | 0.813313 | 2.726999e-51 | -8.615850e-47 |
| Msa0193200 | Msa1432250 | 0.802681 | 4.999068e-49 | -8.615850e-47 |
| Msa0193200 | Msa1433380 | 0.819617 | 1.057281e-52 | -8.615850e-47 |
| Msa0193200 | Msa1439160 | 0.801456 | 8.926505e-49 | -8.615850e-47 |
| Msa0193200 | Msa1448990 | 0.827608 | 1.424577e-54 | -8.615850e-47 |
| Msa0193200 | Msa1450420 | 0.826408 | 2.758426e-54 | -8.615850e-47 |
| Msa0193200 | Msa1451780 | 0.825287 | 5.088518e-54 | -8.615850e-47 |
| Msa0193200 | Msa1465410 | 0.802645 | 5.084147e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193200 | MtrunA17_Chr2g0283101 | 97.576 | 165 | 4 | 0 | 1 | 165 | 1 | 165 | 2.88e-112 | 315 |
| Msa0193200 | MtrunA17_Chr4g0046271 | 78.750 | 160 | 33 | 1 | 1 | 159 | 1 | 160 | 1.68e-76 | 225 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193200 | AT5G46020.1 | 67.857 | 140 | 43 | 2 | 1 | 138 | 1 | 140 | 1.03e-50 | 160 |
Find 53 sgRNAs with CRISPR-Local
Find 161 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGAATTGTTGATTGAAAA+TGG | 0.175282 | 2_1:-9052774 | Msa0193200:exon |
| TTCAGCCTTCTTCTGCTCTT+TGG | 0.212550 | 2_1:+9050429 | None:intergenic |
| TATCTTCATAATGGATCTTA+TGG | 0.258671 | 2_1:-9050308 | Msa0193200:three_prime_UTR |
| TCTCTAGCTTTCAAGTTCTT+TGG | 0.272877 | 2_1:+9051227 | None:intergenic |
| GATCAATCAAAGAAAGATTT+AGG | 0.283638 | 2_1:-9050803 | Msa0193200:intron |
| GTGGAGCCCGAGGAAGTATC+TGG | 0.288324 | 2_1:-9051456 | Msa0193200:CDS |
| GGGGCTTACGAATGTCTTCC+TGG | 0.310672 | 2_1:+9052702 | None:intergenic |
| CCTTTCACGCCTTGAAAGTT+CGG | 0.349398 | 2_1:+9051099 | None:intergenic |
| AAGATCCATTATGAAGATAA+TGG | 0.364872 | 2_1:+9050312 | None:intergenic |
| GAAGTATCTGGGGATGAATC+TGG | 0.372035 | 2_1:-9051444 | Msa0193200:CDS |
| TTTGTCCATTATCTTCATAA+TGG | 0.374671 | 2_1:-9050317 | Msa0193200:three_prime_UTR |
| CAAGATTTCAAGCCACGTTA+TGG | 0.395125 | 2_1:+9050243 | None:intergenic |
| AAAAGACAACCGAACTTTCA+AGG | 0.404473 | 2_1:-9051108 | Msa0193200:CDS |
| TGTCTTCCTGGGTAGAAAAC+TGG | 0.421063 | 2_1:+9052714 | None:intergenic |
| AGAGCAGAAGAAGGCTGAAA+TGG | 0.424690 | 2_1:-9050425 | Msa0193200:CDS |
| CTACTAATTGGAGTAAGATT+AGG | 0.433817 | 2_1:+9050374 | None:intergenic |
| TTGAATTGTTGATTGAAAAT+GGG | 0.452422 | 2_1:-9052773 | Msa0193200:exon |
| AGAAAACTGGCGGCGACCAG+TGG | 0.466800 | 2_1:+9052727 | None:intergenic |
| AGAATTGCAGTGCTAGATAG+AGG | 0.468988 | 2_1:+9050156 | None:intergenic |
| CTAATCTTACTCCAATTAGT+AGG | 0.472069 | 2_1:-9050373 | Msa0193200:three_prime_UTR |
| GTGCTAGATAGAGGGTATCC+AGG | 0.478465 | 2_1:+9050165 | None:intergenic |
| TGCATTACATATTACCAACT+TGG | 0.482867 | 2_1:+9050275 | None:intergenic |
| TGAGATTGAAAATCCTAACT+TGG | 0.484016 | 2_1:-9051255 | Msa0193200:CDS |
| TGCTAGATAGAGGGTATCCA+GGG | 0.492549 | 2_1:+9050166 | None:intergenic |
| TACATATTACCAACTTGGTA+TGG | 0.493820 | 2_1:+9050280 | None:intergenic |
| CCGAACTTTCAAGGCGTGAA+AGG | 0.511076 | 2_1:-9051099 | Msa0193200:intron |
| GGCTCTTATACGTCAGCAAA+GGG | 0.519392 | 2_1:-9050572 | Msa0193200:CDS |
| TGTTGATTGAAAATGGGAAG+AGG | 0.520448 | 2_1:-9052767 | Msa0193200:exon |
| TTCATCCCCAGATACTTCCT+CGG | 0.529253 | 2_1:+9051449 | None:intergenic |
| GAAAGAAGCTGAGAATGAAG+TGG | 0.539144 | 2_1:-9051475 | Msa0193200:CDS |
| TCATCCCCAGATACTTCCTC+GGG | 0.541459 | 2_1:+9051450 | None:intergenic |
| TTCAGCCAAAGAGCAGAAGA+AGG | 0.549691 | 2_1:-9050434 | Msa0193200:intron |
| TTGATGTTGTGCAGAACGAT+TGG | 0.559572 | 2_1:-9050593 | Msa0193200:intron |
| GAAACCTGTCTAAAAGTTCG+AGG | 0.562367 | 2_1:+9051700 | None:intergenic |
| GAGCTCATGAAAGCTATATG+AGG | 0.563002 | 2_1:-9050847 | Msa0193200:CDS |
| TGGAGCCCGAGGAAGTATCT+GGG | 0.570081 | 2_1:-9051455 | Msa0193200:CDS |
| GATTTCAAGCCACGTTATGG+TGG | 0.576143 | 2_1:+9050246 | None:intergenic |
| GGGCTTACGAATGTCTTCCT+GGG | 0.577937 | 2_1:+9052703 | None:intergenic |
| TGAGAATGAAGTGGAGCCCG+AGG | 0.580068 | 2_1:-9051466 | Msa0193200:CDS |
| TGGCTCTTATACGTCAGCAA+AGG | 0.586434 | 2_1:-9050573 | Msa0193200:CDS |
| AAGCGAAATGAAGAGAAAGC+TGG | 0.589158 | 2_1:-9050535 | Msa0193200:intron |
| GAAAACTGGCGGCGACCAGT+GGG | 0.589542 | 2_1:+9052728 | None:intergenic |
| AAAAGTTCGAGGACGGCTAG+TGG | 0.596889 | 2_1:+9051711 | None:intergenic |
| TATATGAGGCTTCAAGAGCA+AGG | 0.600727 | 2_1:-9050833 | Msa0193200:CDS |
| ATGGTGTTACCATACCAAGT+TGG | 0.607773 | 2_1:-9050289 | Msa0193200:three_prime_UTR |
| AAATTCAAGAGCAAGCCCAC+TGG | 0.611119 | 2_1:-9052743 | Msa0193200:CDS |
| GAATTGCAGTGCTAGATAGA+GGG | 0.628212 | 2_1:+9050157 | None:intergenic |
| CCTGTCTAAAAGTTCGAGGA+CGG | 0.634455 | 2_1:+9051704 | None:intergenic |
| GCAATTATTCCACCATAACG+TGG | 0.651424 | 2_1:-9050255 | Msa0193200:three_prime_UTR |
| GGAGCCCGAGGAAGTATCTG+GGG | 0.684631 | 2_1:-9051454 | Msa0193200:CDS |
| CTTCCTGGGTAGAAAACTGG+CGG | 0.712794 | 2_1:+9052717 | None:intergenic |
| GCTAGATAGAGGGTATCCAG+GGG | 0.718383 | 2_1:+9050167 | None:intergenic |
| ACACGCAAGTGAATGTTGTG+TGG | 0.729696 | 2_1:-9050397 | Msa0193200:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAACATAAATAATTGA+AGG | + | chr2_1:9052273-9052292 | None:intergenic | 10.0% |
| !! | TCTTAATAAAATCAATCATA+GGG | + | chr2_1:9050896-9050915 | None:intergenic | 15.0% |
| !!! | TTGTTATTCTTATTAATGTA+AGG | - | chr2_1:9050971-9050990 | Msa0193200:intron | 15.0% |
| !! | TGTTATTCTTATTAATGTAA+GGG | - | chr2_1:9050972-9050991 | Msa0193200:intron | 15.0% |
| !!! | GATTAATTTTTATATGGATA+TGG | - | chr2_1:9051317-9051336 | Msa0193200:intron | 15.0% |
| !!! | AAACTATTTATTTGTTTCTA+TGG | - | chr2_1:9051535-9051554 | Msa0193200:intron | 15.0% |
| !! | TAATTTATACAGAAGAAAAA+AGG | - | chr2_1:9051599-9051618 | Msa0193200:intron | 15.0% |
| !!! | ACATTTTTTATTTTTTCAAG+TGG | - | chr2_1:9051880-9051899 | Msa0193200:intron | 15.0% |
| !!! | ATTGAATTGTTGATTGAAAA+TGG | - | chr2_1:9050118-9050137 | Msa0193200:three_prime_UTR | 20.0% |
| !!! | TTGAATTGTTGATTGAAAAT+GGG | - | chr2_1:9050119-9050138 | Msa0193200:three_prime_UTR | 20.0% |
| !! | TAATAAAATATTGTGCTTTG+TGG | - | chr2_1:9050332-9050351 | Msa0193200:three_prime_UTR | 20.0% |
| !! | GTCTTAATAAAATCAATCAT+AGG | + | chr2_1:9050897-9050916 | None:intergenic | 20.0% |
| !! | GTTATTCTTATTAATGTAAG+GGG | - | chr2_1:9050973-9050992 | Msa0193200:intron | 20.0% |
| !!! | AGTGACGATTAATTTTTATA+TGG | - | chr2_1:9051311-9051330 | Msa0193200:intron | 20.0% |
| !!! | TTAATTTGCTTCTTTAAAAG+TGG | - | chr2_1:9051826-9051845 | Msa0193200:intron | 20.0% |
| !!! | TATATTTTCATCCTACTAAT+TGG | + | chr2_1:9052533-9052552 | None:intergenic | 20.0% |
| !!! | CATGTTCATAAACTGTTTTT+TGG | + | chr2_1:9050479-9050498 | None:intergenic | 25.0% |
| ! | GTTATACTAATAATGTATCG+CGG | - | chr2_1:9050704-9050723 | Msa0193200:intron | 25.0% |
| ! | TAAGTTCGAAATTAGAGAAT+TGG | + | chr2_1:9051016-9051035 | None:intergenic | 25.0% |
| !!! | GTTTTCTTTAGAGAAGAAAA+GGG | + | chr2_1:9051080-9051099 | None:intergenic | 25.0% |
| !!! | TGTTTTCTTTAGAGAAGAAA+AGG | + | chr2_1:9051081-9051100 | None:intergenic | 25.0% |
| ! | ATGTAAAATACAGTTAAACG+TGG | + | chr2_1:9051372-9051391 | None:intergenic | 25.0% |
| !! | ACGTTTAACTGTATTTTACA+TGG | - | chr2_1:9051371-9051390 | Msa0193200:intron | 25.0% |
| !!! | AGAATAATGTTATTTTCGTG+TGG | - | chr2_1:9051751-9051770 | Msa0193200:intron | 25.0% |
| ! | AATTCCTTATGTTCTCATAT+TGG | - | chr2_1:9051931-9051950 | Msa0193200:intron | 25.0% |
| ! | ATTCCTTATGTTCTCATATT+GGG | - | chr2_1:9051932-9051951 | Msa0193200:intron | 25.0% |
| ! | GATCAATCAAAGAAAGATTT+AGG | - | chr2_1:9052089-9052108 | Msa0193200:intron | 25.0% |
| !! | CAAACAAAGCATGTTAATTT+TGG | + | chr2_1:9052240-9052259 | None:intergenic | 25.0% |
| !! | CAAAATTAACATGCTTTGTT+TGG | - | chr2_1:9052238-9052257 | Msa0193200:intron | 25.0% |
| ! | TTTGTCCATTATCTTCATAA+TGG | - | chr2_1:9052575-9052594 | Msa0193200:intron | 25.0% |
| ! | AAGATCCATTATGAAGATAA+TGG | + | chr2_1:9052583-9052602 | None:intergenic | 25.0% |
| !!! | TATCTTCATAATGGATCTTA+TGG | - | chr2_1:9052584-9052603 | Msa0193200:intron | 25.0% |
| AAAACCCAGAAAGCAAAAAA+TGG | + | chr2_1:9050220-9050239 | None:intergenic | 30.0% | |
| ATGTCATAAGCCGTTATATT+GGG | - | chr2_1:9050496-9050515 | Msa0193200:intron | 30.0% | |
| TCAGTTATTTAACCAGTTCT+AGG | - | chr2_1:9050574-9050593 | Msa0193200:CDS | 30.0% | |
| CAAATTCTACTACTCTACAA+TGG | - | chr2_1:9050648-9050667 | Msa0193200:intron | 30.0% | |
| TATAACGTGTTGTCAAATAG+TGG | + | chr2_1:9050690-9050709 | None:intergenic | 30.0% | |
| TTAATCATAGAAAGAACCTC+TGG | - | chr2_1:9051120-9051139 | Msa0193200:intron | 30.0% | |
| AAGAAACAATAAGTTTCCAG+AGG | + | chr2_1:9051139-9051158 | None:intergenic | 30.0% | |
| AGTTAAACGTGGAAAGAAAA+TGG | + | chr2_1:9051361-9051380 | None:intergenic | 30.0% | |
| TTCTCAGCTTCTTTCTAATA+AGG | + | chr2_1:9051412-9051431 | None:intergenic | 30.0% | |
| !!! | CACAATCTTTGCATTTTTTG+AGG | - | chr2_1:9051506-9051525 | Msa0193200:intron | 30.0% |
| AGAAGAAAAAAGGAACTCAA+GGG | - | chr2_1:9051609-9051628 | Msa0193200:intron | 30.0% | |
| TGAGATTGAAAATCCTAACT+TGG | - | chr2_1:9051637-9051656 | Msa0193200:intron | 30.0% | |
| !!! | TTCTTTGGTTTTACCAAGTT+AGG | + | chr2_1:9051653-9051672 | None:intergenic | 30.0% |
| !! | CATTACATAGTCATTTTCAG+AGG | - | chr2_1:9051720-9051739 | Msa0193200:CDS | 30.0% |
| !! | TAGTCATTTTCAGAGGAATT+TGG | - | chr2_1:9051727-9051746 | Msa0193200:intron | 30.0% |
| TATTGGGCTATTATTGAAAC+TGG | - | chr2_1:9051948-9051967 | Msa0193200:intron | 30.0% | |
| ! | ATGTGATAATGTCAAACGTA+CGG | + | chr2_1:9052168-9052187 | None:intergenic | 30.0% |
| ! | AACAATCAGTTTCATGCTTT+TGG | + | chr2_1:9052426-9052445 | None:intergenic | 30.0% |
| CTACTAATTGGAGTAAGATT+AGG | + | chr2_1:9052521-9052540 | None:intergenic | 30.0% | |
| CTAATCTTACTCCAATTAGT+AGG | - | chr2_1:9052519-9052538 | Msa0193200:intron | 30.0% | |
| TACATATTACCAACTTGGTA+TGG | + | chr2_1:9052615-9052634 | None:intergenic | 30.0% | |
| TGCATTACATATTACCAACT+TGG | + | chr2_1:9052620-9052639 | None:intergenic | 30.0% | |
| !! | TGCAATTCTTTTAGGAAAGT+AGG | - | chr2_1:9052750-9052769 | Msa0193200:CDS | 30.0% |
| !! | GCAATTCTTTTAGGAAAGTA+GGG | - | chr2_1:9052751-9052770 | Msa0193200:CDS | 30.0% |
| !! | CAATTCTTTTAGGAAAGTAG+GGG | - | chr2_1:9052752-9052771 | Msa0193200:CDS | 30.0% |
| ! | TGTTGATTGAAAATGGGAAG+AGG | - | chr2_1:9050125-9050144 | Msa0193200:three_prime_UTR | 35.0% |
| AGAAAGCAAAAAATGGAGGA+GGG | + | chr2_1:9050213-9050232 | None:intergenic | 35.0% | |
| !!! | TCCTCCATTTTTTGCTTTCT+GGG | - | chr2_1:9050213-9050232 | Msa0193200:three_prime_UTR | 35.0% |
| ATATTGTGCTTTGTGGATGA+AGG | - | chr2_1:9050339-9050358 | Msa0193200:three_prime_UTR | 35.0% | |
| CATGTCATAAGCCGTTATAT+TGG | - | chr2_1:9050495-9050514 | Msa0193200:intron | 35.0% | |
| TTGTCAAATAGTGGCTATAG+CGG | + | chr2_1:9050681-9050700 | None:intergenic | 35.0% | |
| AGTATAACACTATGTCGTAG+CGG | + | chr2_1:9050753-9050772 | None:intergenic | 35.0% | |
| AAACCTACTAAGATGTGTAG+AGG | + | chr2_1:9050815-9050834 | None:intergenic | 35.0% | |
| TCTACACATCTTAGTAGGTT+TGG | - | chr2_1:9050814-9050833 | Msa0193200:CDS | 35.0% | |
| ATCTTAGTAGGTTTGGCAAA+GGG | - | chr2_1:9050821-9050840 | Msa0193200:CDS | 35.0% | |
| ATGCTGAGGAAGTTACATAT+TGG | - | chr2_1:9050937-9050956 | Msa0193200:intron | 35.0% | |
| CAGAAGAAAAAAGGAACTCA+AGG | - | chr2_1:9051608-9051627 | Msa0193200:intron | 35.0% | |
| !! | TCTCTAGCTTTCAAGTTCTT+TGG | + | chr2_1:9051668-9051687 | None:intergenic | 35.0% |
| TGAGTTCAACTTACCATGTT+TGG | - | chr2_1:9051696-9051715 | Msa0193200:intron | 35.0% | |
| GACTATGTAATGACCAAACA+TGG | + | chr2_1:9051712-9051731 | None:intergenic | 35.0% | |
| AAAAGACAACCGAACTTTCA+AGG | - | chr2_1:9051784-9051803 | Msa0193200:intron | 35.0% | |
| !! | ACACAATCATGCTCTAAAAG+AGG | - | chr2_1:9051857-9051876 | Msa0193200:intron | 35.0% |
| TAGCCCAATATGAGAACATA+AGG | + | chr2_1:9051938-9051957 | None:intergenic | 35.0% | |
| ! | TGTGATAATGTCAAACGTAC+GGG | + | chr2_1:9052167-9052186 | None:intergenic | 35.0% |
| ! | TCTAGCACTGCAATTCTTTT+AGG | - | chr2_1:9052742-9052761 | Msa0193200:CDS | 35.0% |
| GAAAGCAAAAAATGGAGGAG+GGG | + | chr2_1:9050212-9050231 | None:intergenic | 40.0% | |
| CAGAAAGCAAAAAATGGAGG+AGG | + | chr2_1:9050214-9050233 | None:intergenic | 40.0% | |
| !!! | CTCCTCCATTTTTTGCTTTC+TGG | - | chr2_1:9050212-9050231 | Msa0193200:three_prime_UTR | 40.0% |
| ACCCAGAAAGCAAAAAATGG+AGG | + | chr2_1:9050217-9050236 | None:intergenic | 40.0% | |
| GCCACATCTTCCCAATATAA+CGG | + | chr2_1:9050509-9050528 | None:intergenic | 40.0% | |
| TATATTGGGAAGATGTGGCT+TGG | - | chr2_1:9050510-9050529 | Msa0193200:intron | 40.0% | |
| TAACGATCACTTCCTAGAAC+TGG | + | chr2_1:9050589-9050608 | None:intergenic | 40.0% | |
| TCACATATTGCGAAGAACAG+CGG | - | chr2_1:9050619-9050638 | Msa0193200:intron | 40.0% | |
| GATCCTCTACACATCTTAGT+AGG | - | chr2_1:9050809-9050828 | Msa0193200:CDS | 40.0% | |
| CATCTTAGTAGGTTTGGCAA+AGG | - | chr2_1:9050820-9050839 | Msa0193200:CDS | 40.0% | |
| !! | AAAAGGGCACAAAAGGGTTT+TGG | + | chr2_1:9051064-9051083 | None:intergenic | 40.0% |
| ! | GAGAAGAAAAGGGCACAAAA+GGG | + | chr2_1:9051070-9051089 | None:intergenic | 40.0% |
| ! | AGAGAAGAAAAGGGCACAAA+AGG | + | chr2_1:9051071-9051090 | None:intergenic | 40.0% |
| GAAACCTGTCTAAAAGTTCG+AGG | + | chr2_1:9051195-9051214 | None:intergenic | 40.0% | |
| TTTGAGGAGAGGAGTAAAAG+GGG | + | chr2_1:9051239-9051258 | None:intergenic | 40.0% | |
| GTTTGAGGAGAGGAGTAAAA+GGG | + | chr2_1:9051240-9051259 | None:intergenic | 40.0% | |
| TGTTTGAGGAGAGGAGTAAA+AGG | + | chr2_1:9051241-9051260 | None:intergenic | 40.0% | |
| AGTGATCACATGCATGTTTG+AGG | + | chr2_1:9051255-9051274 | None:intergenic | 40.0% | |
| GAAAGAAGCTGAGAATGAAG+TGG | - | chr2_1:9051417-9051436 | Msa0193200:intron | 40.0% | |
| !!! | TGTTATTTTCGTGTGGATGC+AGG | - | chr2_1:9051758-9051777 | Msa0193200:intron | 40.0% |
| ! | ATTCCTTCTTGTTTGCAGAG+AGG | - | chr2_1:9052007-9052026 | Msa0193200:intron | 40.0% |
| GAGCTCATGAAAGCTATATG+AGG | - | chr2_1:9052045-9052064 | Msa0193200:intron | 40.0% | |
| TATATGAGGCTTCAAGAGCA+AGG | - | chr2_1:9052059-9052078 | Msa0193200:intron | 40.0% | |
| TTGATGTTGTGCAGAACGAT+TGG | - | chr2_1:9052299-9052318 | Msa0193200:intron | 40.0% | |
| AAGCGAAATGAAGAGAAAGC+TGG | - | chr2_1:9052357-9052376 | Msa0193200:intron | 40.0% | |
| !! | ATGGTGTTACCATACCAAGT+TGG | - | chr2_1:9052603-9052622 | Msa0193200:intron | 40.0% |
| GCAATTATTCCACCATAACG+TGG | - | chr2_1:9052637-9052656 | Msa0193200:intron | 40.0% | |
| CAAGATTTCAAGCCACGTTA+TGG | + | chr2_1:9052652-9052671 | None:intergenic | 40.0% | |
| ! | ACTTTTCTTCACATCGATGC+TGG | - | chr2_1:9052683-9052702 | Msa0193200:intron | 40.0% |
| ! | CTTTTCTTCACATCGATGCT+GGG | - | chr2_1:9052684-9052703 | Msa0193200:intron | 40.0% |
| GAATTGCAGTGCTAGATAGA+GGG | + | chr2_1:9052738-9052757 | None:intergenic | 40.0% | |
| AGAATTGCAGTGCTAGATAG+AGG | + | chr2_1:9052739-9052758 | None:intergenic | 40.0% | |
| AAATTCAAGAGCAAGCCCAC+TGG | - | chr2_1:9050149-9050168 | Msa0193200:three_prime_UTR | 45.0% | |
| TGTCTTCCTGGGTAGAAAAC+TGG | + | chr2_1:9050181-9050200 | None:intergenic | 45.0% | |
| GCCGTTATATTGGGAAGATG+TGG | - | chr2_1:9050505-9050524 | Msa0193200:intron | 45.0% | |
| ! | TCTGATTTCTCAGTGCCACT+TGG | + | chr2_1:9050541-9050560 | None:intergenic | 45.0% |
| ! | TGGCACTGAGAAATCAGACA+GGG | - | chr2_1:9050543-9050562 | Msa0193200:CDS | 45.0% |
| ! | ACACTATGTCGTAGCGGAAT+TGG | + | chr2_1:9050747-9050766 | None:intergenic | 45.0% |
| TCACCAGTGTCGTCAAATAG+TGG | + | chr2_1:9050780-9050799 | None:intergenic | 45.0% | |
| AGGTTTGGCAAAGGGAAATG+TGG | - | chr2_1:9050829-9050848 | Msa0193200:CDS | 45.0% | |
| GGTTTGGCAAAGGGAAATGT+GGG | - | chr2_1:9050830-9050849 | Msa0193200:CDS | 45.0% | |
| GTTTGGCAAAGGGAAATGTG+GGG | - | chr2_1:9050831-9050850 | Msa0193200:CDS | 45.0% | |
| !! | CTTTTGACTACTGCAGTTGC+TGG | - | chr2_1:9051156-9051175 | Msa0193200:intron | 45.0% |
| CCTGTCTAAAAGTTCGAGGA+CGG | + | chr2_1:9051191-9051210 | None:intergenic | 45.0% | |
| AGTAAAAGGGGGAAGAGGAA+AGG | + | chr2_1:9051227-9051246 | None:intergenic | 45.0% | |
| TTGAGGAGAGGAGTAAAAGG+GGG | + | chr2_1:9051238-9051257 | None:intergenic | 45.0% | |
| TCACATGCATGTTTGAGGAG+AGG | + | chr2_1:9051250-9051269 | None:intergenic | 45.0% | |
| TTCATCCCCAGATACTTCCT+CGG | + | chr2_1:9051446-9051465 | None:intergenic | 45.0% | |
| ! | GAAGTATCTGGGGATGAATC+TGG | - | chr2_1:9051448-9051467 | Msa0193200:CDS | 45.0% |
| CCTTTCACGCCTTGAAAGTT+CGG | + | chr2_1:9051796-9051815 | None:intergenic | 45.0% | |
| TCTCCTCTCTGCAAACAAGA+AGG | + | chr2_1:9052013-9052032 | None:intergenic | 45.0% | |
| TGGCTCTTATACGTCAGCAA+AGG | - | chr2_1:9052319-9052338 | Msa0193200:intron | 45.0% | |
| GGCTCTTATACGTCAGCAAA+GGG | - | chr2_1:9052320-9052339 | Msa0193200:intron | 45.0% | |
| TTCAGCCAAAGAGCAGAAGA+AGG | - | chr2_1:9052458-9052477 | Msa0193200:intron | 45.0% | |
| TTCAGCCTTCTTCTGCTCTT+TGG | + | chr2_1:9052466-9052485 | None:intergenic | 45.0% | |
| AGAGCAGAAGAAGGCTGAAA+TGG | - | chr2_1:9052467-9052486 | Msa0193200:intron | 45.0% | |
| ACACGCAAGTGAATGTTGTG+TGG | - | chr2_1:9052495-9052514 | Msa0193200:intron | 45.0% | |
| GATTTCAAGCCACGTTATGG+TGG | + | chr2_1:9052649-9052668 | None:intergenic | 45.0% | |
| ! | CAGCTTATTGTTTTCTCCCC+TGG | - | chr2_1:9052709-9052728 | Msa0193200:intron | 45.0% |
| !! | TGCTAGATAGAGGGTATCCA+GGG | + | chr2_1:9052729-9052748 | None:intergenic | 45.0% |
| CTTCCTGGGTAGAAAACTGG+CGG | + | chr2_1:9050178-9050197 | None:intergenic | 50.0% | |
| GGGCTTACGAATGTCTTCCT+GGG | + | chr2_1:9050192-9050211 | None:intergenic | 50.0% | |
| ! | GTGGCACTGAGAAATCAGAC+AGG | - | chr2_1:9050542-9050561 | Msa0193200:CDS | 50.0% |
| CCAGTGTCGTCAAATAGTGG+TGG | + | chr2_1:9050777-9050796 | None:intergenic | 50.0% | |
| CCACCACTATTTGACGACAC+TGG | - | chr2_1:9050774-9050793 | Msa0193200:intron | 50.0% | |
| AGTTCAGTGCGTCAATGCTG+AGG | - | chr2_1:9050923-9050942 | Msa0193200:intron | 50.0% | |
| AAAAGTTCGAGGACGGCTAG+TGG | + | chr2_1:9051184-9051203 | None:intergenic | 50.0% | |
| ! | CCGTCCTCGAACTTTTAGAC+AGG | - | chr2_1:9051188-9051207 | Msa0193200:intron | 50.0% |
| GGAAGAGGAAAGGATGCAGA+AGG | + | chr2_1:9051217-9051236 | None:intergenic | 50.0% | |
| AGAGGAGTAAAAGGGGGAAG+AGG | + | chr2_1:9051232-9051251 | None:intergenic | 50.0% | |
| TCATCCCCAGATACTTCCTC+GGG | + | chr2_1:9051445-9051464 | None:intergenic | 50.0% | |
| CCGAACTTTCAAGGCGTGAA+AGG | - | chr2_1:9051793-9051812 | Msa0193200:intron | 50.0% | |
| !! | GCTAGATAGAGGGTATCCAG+GGG | + | chr2_1:9052728-9052747 | None:intergenic | 50.0% |
| !! | GTGCTAGATAGAGGGTATCC+AGG | + | chr2_1:9052730-9052749 | None:intergenic | 50.0% |
| GGGGCTTACGAATGTCTTCC+TGG | + | chr2_1:9050193-9050212 | None:intergenic | 55.0% | |
| ! | TTGGGAAGATGTGGCTTGGC+TGG | - | chr2_1:9050514-9050533 | Msa0193200:intron | 55.0% |
| TGAGAATGAAGTGGAGCCCG+AGG | - | chr2_1:9051426-9051445 | Msa0193200:CDS | 55.0% | |
| !! | TGGAGCCCGAGGAAGTATCT+GGG | - | chr2_1:9051437-9051456 | Msa0193200:CDS | 55.0% |
| GAAAACTGGCGGCGACCAGT+GGG | + | chr2_1:9050167-9050186 | None:intergenic | 60.0% | |
| AGAAAACTGGCGGCGACCAG+TGG | + | chr2_1:9050168-9050187 | None:intergenic | 60.0% | |
| ! | TCGCCGCCAGTTTTCTACCC+AGG | - | chr2_1:9050172-9050191 | Msa0193200:three_prime_UTR | 60.0% |
| ! | TGTGGCTTGGCTGGTCCAAG+TGG | - | chr2_1:9050523-9050542 | Msa0193200:intron | 60.0% |
| !! | GTGGAGCCCGAGGAAGTATC+TGG | - | chr2_1:9051436-9051455 | Msa0193200:CDS | 60.0% |
| !! | GGAGCCCGAGGAAGTATCTG+GGG | - | chr2_1:9051438-9051457 | Msa0193200:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 9050113 | 9052801 | 9050113 | ID=Msa0193200;Name=Msa0193200 |
| chr2_1 | mRNA | 9050113 | 9052801 | 9050113 | ID=Msa0193200-mRNA-1;Parent=Msa0193200;Name=Msa0193200-mRNA-1;_AED=0.01;_eAED=0.01;_QI=24|1|1|1|1|1|8|295|165 |
| chr2_1 | exon | 9050113 | 9050451 | 9050113 | ID=Msa0193200-mRNA-1:exon:4116;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9050536 | 9050601 | 9050536 | ID=Msa0193200-mRNA-1:exon:4115;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9050804 | 9050889 | 9050804 | ID=Msa0193200-mRNA-1:exon:4114;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9051100 | 9051134 | 9051100 | ID=Msa0193200-mRNA-1:exon:4113;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9051220 | 9051303 | 9051220 | ID=Msa0193200-mRNA-1:exon:4112;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9051419 | 9051496 | 9051419 | ID=Msa0193200-mRNA-1:exon:4111;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9051705 | 9051742 | 9051705 | ID=Msa0193200-mRNA-1:exon:4110;Parent=Msa0193200-mRNA-1 |
| chr2_1 | exon | 9052711 | 9052801 | 9052711 | ID=Msa0193200-mRNA-1:exon:4109;Parent=Msa0193200-mRNA-1 |
| chr2_1 | five_prime_UTR | 9052778 | 9052801 | 9052778 | ID=Msa0193200-mRNA-1:five_prime_utr;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9052711 | 9052777 | 9052711 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9051705 | 9051742 | 9051705 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9051419 | 9051496 | 9051419 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9051220 | 9051303 | 9051220 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9051100 | 9051134 | 9051100 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9050804 | 9050889 | 9050804 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9050536 | 9050601 | 9050536 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | CDS | 9050408 | 9050451 | 9050408 | ID=Msa0193200-mRNA-1:cds;Parent=Msa0193200-mRNA-1 |
| chr2_1 | three_prime_UTR | 9050113 | 9050407 | 9050113 | ID=Msa0193200-mRNA-1:three_prime_utr;Parent=Msa0193200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
