Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505610 | XP_024633413.1 | 97.087 | 515 | 15 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1011 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505610 | sp|F4I9E1|NFD4_ARATH | 38.636 | 528 | 293 | 11 | 7 | 511 | 43 | 562 | 4.45e-101 | 318 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505610 | A0A072UZ85 | 97.297 | 481 | 13 | 0 | 1 | 481 | 1 | 481 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026120 | Msa0505610 | 0.804508 | 2.088642e-49 | -8.615850e-47 |
| Msa0039200 | Msa0505610 | 0.804726 | 1.880740e-49 | -8.615850e-47 |
| Msa0066990 | Msa0505610 | 0.803958 | 2.718745e-49 | -8.615850e-47 |
| Msa0080620 | Msa0505610 | 0.806424 | 8.281610e-50 | -8.615850e-47 |
| Msa0083570 | Msa0505610 | 0.809418 | 1.911112e-50 | -8.615850e-47 |
| Msa0090350 | Msa0505610 | 0.827643 | 1.397111e-54 | -8.615850e-47 |
| Msa0112800 | Msa0505610 | 0.820275 | 7.476337e-53 | -8.615850e-47 |
| Msa0114960 | Msa0505610 | 0.818092 | 2.347458e-52 | -8.615850e-47 |
| Msa0117300 | Msa0505610 | 0.821756 | 3.409301e-53 | -8.615850e-47 |
| Msa0130120 | Msa0505610 | 0.800093 | 1.693929e-48 | -8.615850e-47 |
| Msa0133670 | Msa0505610 | 0.801584 | 8.405789e-49 | -8.615850e-47 |
| Msa0136520 | Msa0505610 | 0.809094 | 2.242689e-50 | -8.615850e-47 |
| Msa0137810 | Msa0505610 | 0.803976 | 2.696153e-49 | -8.615850e-47 |
| Msa0138380 | Msa0505610 | 0.815301 | 9.914254e-52 | -8.615850e-47 |
| Msa0156780 | Msa0505610 | 0.804923 | 1.711411e-49 | -8.615850e-47 |
| Msa0160650 | Msa0505610 | 0.803386 | 3.573805e-49 | -8.615850e-47 |
| Msa0166580 | Msa0505610 | 0.814553 | 1.452660e-51 | -8.615850e-47 |
| Msa0180590 | Msa0505610 | 0.809980 | 1.446606e-50 | -8.615850e-47 |
| Msa0184030 | Msa0505610 | 0.833725 | 4.520838e-56 | -8.615850e-47 |
| Msa0184120 | Msa0505610 | 0.805146 | 1.536529e-49 | -8.615850e-47 |
| Msa0186510 | Msa0505610 | 0.805175 | 1.515149e-49 | -8.615850e-47 |
| Msa0190470 | Msa0505610 | 0.800575 | 1.351279e-48 | -8.615850e-47 |
| Msa0197600 | Msa0505610 | 0.810610 | 1.058382e-50 | -8.615850e-47 |
| Msa0198140 | Msa0505610 | 0.801819 | 7.521762e-49 | -8.615850e-47 |
| Msa0198220 | Msa0505610 | 0.805417 | 1.348656e-49 | -8.615850e-47 |
| Msa0201910 | Msa0505610 | 0.810729 | 9.974132e-51 | -8.615850e-47 |
| Msa0218480 | Msa0505610 | 0.811922 | 5.493203e-51 | -8.615850e-47 |
| Msa0218590 | Msa0505610 | 0.814315 | 1.639757e-51 | -8.615850e-47 |
| Msa0221940 | Msa0505610 | 0.807364 | 5.240595e-50 | -8.615850e-47 |
| Msa0366020 | Msa0505610 | 0.831400 | 1.705125e-55 | -8.615850e-47 |
| Msa0372380 | Msa0505610 | 0.834206 | 3.426841e-56 | -8.615850e-47 |
| Msa0372990 | Msa0505610 | 0.819342 | 1.221605e-52 | -8.615850e-47 |
| Msa0377460 | Msa0505610 | 0.820280 | 7.453853e-53 | -8.615850e-47 |
| Msa0377690 | Msa0505610 | 0.813368 | 2.652151e-51 | -8.615850e-47 |
| Msa0379720 | Msa0505610 | 0.826361 | 2.829657e-54 | -8.615850e-47 |
| Msa0385770 | Msa0505610 | 0.807386 | 5.184616e-50 | -8.615850e-47 |
| Msa0403720 | Msa0505610 | 0.810875 | 9.274140e-51 | -8.615850e-47 |
| Msa0404880 | Msa0505610 | 0.824876 | 6.363968e-54 | -8.615850e-47 |
| Msa0414010 | Msa0505610 | 0.939297 | 1.609599e-99 | -8.615850e-47 |
| Msa0421390 | Msa0505610 | 0.813146 | 2.966782e-51 | -8.615850e-47 |
| Msa0426860 | Msa0505610 | 0.818930 | 1.515371e-52 | -8.615850e-47 |
| Msa0426890 | Msa0505610 | 0.824059 | 9.908891e-54 | -8.615850e-47 |
| Msa0426990 | Msa0505610 | 0.827424 | 1.576494e-54 | -8.615850e-47 |
| Msa0429100 | Msa0505610 | 0.825060 | 5.758445e-54 | -8.615850e-47 |
| Msa0429130 | Msa0505610 | 0.823803 | 1.137484e-53 | -8.615850e-47 |
| Msa0431940 | Msa0505610 | 0.836844 | 7.374491e-57 | -8.615850e-47 |
| Msa0436600 | Msa0505610 | 0.810631 | 1.047282e-50 | -8.615850e-47 |
| Msa0436610 | Msa0505610 | 0.801211 | 1.002121e-48 | -8.615850e-47 |
| Msa0448400 | Msa0505610 | 0.800013 | 1.758336e-48 | -8.615850e-47 |
| Msa0459080 | Msa0505610 | 0.871850 | 4.990051e-67 | -8.615850e-47 |
| Msa0473320 | Msa0505610 | 0.820457 | 6.791687e-53 | -8.615850e-47 |
| Msa0240290 | Msa0505610 | 0.800326 | 1.519176e-48 | -8.615850e-47 |
| Msa0240460 | Msa0505610 | 0.815369 | 9.575422e-52 | -8.615850e-47 |
| Msa0260930 | Msa0505610 | 0.806757 | 7.044233e-50 | -8.615850e-47 |
| Msa0278340 | Msa0505610 | 0.804029 | 2.627939e-49 | -8.615850e-47 |
| Msa0282880 | Msa0505610 | 0.800571 | 1.353775e-48 | -8.615850e-47 |
| Msa0298590 | Msa0505610 | 0.826175 | 3.132952e-54 | -8.615850e-47 |
| Msa0317630 | Msa0505610 | 0.802415 | 5.671689e-49 | -8.615850e-47 |
| Msa0496470 | Msa0505610 | 0.802418 | 5.662879e-49 | -8.615850e-47 |
| Msa0501350 | Msa0505610 | 0.806576 | 7.692628e-50 | -8.615850e-47 |
| Msa0505610 | Msa0512770 | 0.824050 | 9.958905e-54 | -8.615850e-47 |
| Msa0505610 | Msa0515400 | 0.801730 | 7.844449e-49 | -8.615850e-47 |
| Msa0505610 | Msa0515420 | 0.804461 | 2.136030e-49 | -8.615850e-47 |
| Msa0505610 | Msa0517400 | 0.816568 | 5.171786e-52 | -8.615850e-47 |
| Msa0505610 | Msa0520810 | 0.825117 | 5.582778e-54 | -8.615850e-47 |
| Msa0505610 | Msa0549330 | 0.824895 | 6.299690e-54 | -8.615850e-47 |
| Msa0505610 | Msa0555510 | 0.831177 | 1.935585e-55 | -8.615850e-47 |
| Msa0505610 | Msa0558800 | 0.814102 | 1.827520e-51 | -8.615850e-47 |
| Msa0505610 | Msa0568490 | 0.804361 | 2.241068e-49 | -8.615850e-47 |
| Msa0505610 | Msa0569630 | 0.807537 | 4.815723e-50 | -8.615850e-47 |
| Msa0505610 | Msa0587060 | 0.814148 | 1.785841e-51 | -8.615850e-47 |
| Msa0505610 | Msa0595240 | 0.807297 | 5.415805e-50 | -8.615850e-47 |
| Msa0505610 | Msa0600280 | 0.805388 | 1.367322e-49 | -8.615850e-47 |
| Msa0505610 | Msa0604640 | 0.813160 | 2.945880e-51 | -8.615850e-47 |
| Msa0505610 | Msa0606680 | 0.801677 | 8.041898e-49 | -8.615850e-47 |
| Msa0505610 | Msa0607620 | 0.811142 | 8.115466e-51 | -8.615850e-47 |
| Msa0505610 | Msa0608940 | 0.827019 | 1.971084e-54 | -8.615850e-47 |
| Msa0505610 | Msa0619480 | 0.823067 | 1.690625e-53 | -8.615850e-47 |
| Msa0505610 | Msa0640780 | 0.802321 | 5.930079e-49 | -8.615850e-47 |
| Msa0505610 | Msa0647860 | 0.807907 | 4.018916e-50 | -8.615850e-47 |
| Msa0505610 | Msa0648170 | 0.829398 | 5.263825e-55 | -8.615850e-47 |
| Msa0505610 | Msa0649530 | 0.813975 | 1.949230e-51 | -8.615850e-47 |
| Msa0505610 | Msa0659100 | 0.801176 | 1.018755e-48 | -8.615850e-47 |
| Msa0505610 | Msa0659640 | 0.813703 | 2.238514e-51 | -8.615850e-47 |
| Msa0505610 | Msa0665010 | 0.809913 | 1.495830e-50 | -8.615850e-47 |
| Msa0505610 | Msa0687320 | 0.810526 | 1.103108e-50 | -8.615850e-47 |
| Msa0505610 | Msa0690580 | 0.804332 | 2.273092e-49 | -8.615850e-47 |
| Msa0505610 | Msa0691180 | 0.806932 | 6.468321e-50 | -8.615850e-47 |
| Msa0505610 | Msa0691740 | 0.808219 | 3.448116e-50 | -8.615850e-47 |
| Msa0505610 | Msa0700870 | 0.802318 | 5.937283e-49 | -8.615850e-47 |
| Msa0505610 | Msa0705130 | 0.804646 | 1.955212e-49 | -8.615850e-47 |
| Msa0505610 | Msa0714060 | 0.816770 | 4.659972e-52 | -8.615850e-47 |
| Msa0505610 | Msa0714200 | 0.820443 | 6.841701e-53 | -8.615850e-47 |
| Msa0505610 | Msa0729590 | 0.823229 | 1.549715e-53 | -8.615850e-47 |
| Msa0505610 | Msa0729780 | 0.806488 | 8.027272e-50 | -8.615850e-47 |
| Msa0505610 | Msa0738600 | 0.800175 | 1.630160e-48 | -8.615850e-47 |
| Msa0505610 | Msa0747660 | 0.814256 | 1.689822e-51 | -8.615850e-47 |
| Msa0505610 | Msa0755590 | 0.808643 | 2.799872e-50 | -8.615850e-47 |
| Msa0505610 | Msa0756440 | 0.810364 | 1.195646e-50 | -8.615850e-47 |
| Msa0505610 | Msa0766880 | 0.813015 | 3.170287e-51 | -8.615850e-47 |
| Msa0505610 | Msa0770020 | 0.807111 | 5.929683e-50 | -8.615850e-47 |
| Msa0505610 | Msa0775420 | 0.807181 | 5.731113e-50 | -8.615850e-47 |
| Msa0505610 | Msa0776590 | 0.809408 | 1.920851e-50 | -8.615850e-47 |
| Msa0505610 | Msa0796610 | 0.801797 | 7.599752e-49 | -8.615850e-47 |
| Msa0505610 | Msa0797240 | 0.813937 | 1.987967e-51 | -8.615850e-47 |
| Msa0505610 | Msa0812800 | 0.804651 | 1.949929e-49 | -8.615850e-47 |
| Msa0505610 | Msa0818950 | 0.804557 | 2.039950e-49 | -8.615850e-47 |
| Msa0505610 | Msa0833910 | 0.808049 | 3.748712e-50 | -8.615850e-47 |
| Msa0505610 | Msa0834160 | 0.813510 | 2.468419e-51 | -8.615850e-47 |
| Msa0505610 | Msa0835550 | 0.810035 | 1.407922e-50 | -8.615850e-47 |
| Msa0505610 | Msa0848780 | 0.809512 | 1.824232e-50 | -8.615850e-47 |
| Msa0505610 | Msa0853150 | 0.802905 | 4.493437e-49 | -8.615850e-47 |
| Msa0505610 | Msa0895860 | 0.801779 | 7.663325e-49 | -8.615850e-47 |
| Msa0505610 | Msa0896920 | -0.800718 | 1.263746e-48 | -8.615850e-47 |
| Msa0505610 | Msa0899080 | 0.843196 | 1.625629e-58 | -8.615850e-47 |
| Msa0505610 | Msa0927890 | 0.874085 | 8.892080e-68 | -8.615850e-47 |
| Msa0505610 | Msa0961200 | 0.806509 | 7.946236e-50 | -8.615850e-47 |
| Msa0505610 | Msa0967250 | 0.828045 | 1.118325e-54 | -8.615850e-47 |
| Msa0505610 | Msa0967260 | 0.860618 | 1.821879e-63 | -8.615850e-47 |
| Msa0505610 | Msa0968240 | 0.813654 | 2.294874e-51 | -8.615850e-47 |
| Msa0505610 | Msa0975460 | 0.802089 | 6.619019e-49 | -8.615850e-47 |
| Msa0505610 | Msa0995660 | 0.826735 | 2.303886e-54 | -8.615850e-47 |
| Msa0505610 | Msa0998940 | 0.863128 | 3.106069e-64 | -8.615850e-47 |
| Msa0505610 | Msa1008960 | 0.810755 | 9.844190e-51 | -8.615850e-47 |
| Msa0505610 | Msa1029200 | 0.803724 | 3.041098e-49 | -8.615850e-47 |
| Msa0505610 | Msa1031220 | 0.803561 | 3.286919e-49 | -8.615850e-47 |
| Msa0505610 | Msa1038570 | 0.804818 | 1.799599e-49 | -8.615850e-47 |
| Msa0505610 | Msa1071310 | 0.802511 | 5.419459e-49 | -8.615850e-47 |
| Msa0505610 | Msa1071460 | 0.832056 | 1.175021e-55 | -8.615850e-47 |
| Msa0505610 | Msa1089130 | 0.809729 | 1.638644e-50 | -8.615850e-47 |
| Msa0505610 | Msa1098470 | 0.833433 | 5.348269e-56 | -8.615850e-47 |
| Msa0505610 | Msa1129160 | 0.802450 | 5.577779e-49 | -8.615850e-47 |
| Msa0505610 | Msa1129470 | 0.804541 | 2.056243e-49 | -8.615850e-47 |
| Msa0505610 | Msa1129660 | 0.817655 | 2.947120e-52 | -8.615850e-47 |
| Msa0505610 | Msa1152500 | 0.833410 | 5.419063e-56 | -8.615850e-47 |
| Msa0505610 | Msa1154770 | 0.809288 | 2.037332e-50 | -8.615850e-47 |
| Msa0505610 | Msa1173410 | 0.812795 | 3.542182e-51 | -8.615850e-47 |
| Msa0505610 | Msa1182950 | 0.802290 | 6.018808e-49 | -8.615850e-47 |
| Msa0505610 | Msa1182960 | 0.807890 | 4.052769e-50 | -8.615850e-47 |
| Msa0505610 | Msa1186010 | 0.823938 | 1.057904e-53 | -8.615850e-47 |
| Msa0505610 | Msa1203840 | 0.827123 | 1.861157e-54 | -8.615850e-47 |
| Msa0505610 | Msa1203860 | 0.838604 | 2.604921e-57 | -8.615850e-47 |
| Msa0505610 | Msa1216700 | 0.847058 | 1.470515e-59 | -8.615850e-47 |
| Msa0505610 | Msa1216900 | 0.845479 | 3.957789e-59 | -8.615850e-47 |
| Msa0505610 | Msa1223510 | 0.819136 | 1.360415e-52 | -8.615850e-47 |
| Msa0505610 | Msa1230190 | 0.812579 | 3.949528e-51 | -8.615850e-47 |
| Msa0505610 | Msa1245300 | 0.803279 | 3.761389e-49 | -8.615850e-47 |
| Msa0505610 | Msa1252040 | 0.804101 | 2.539070e-49 | -8.615850e-47 |
| Msa0505610 | Msa1262740 | 0.814003 | 1.921616e-51 | -8.615850e-47 |
| Msa0505610 | Msa1264230 | 0.830024 | 3.707010e-55 | -8.615850e-47 |
| Msa0505610 | Msa1272770 | 0.822308 | 2.538662e-53 | -8.615850e-47 |
| Msa0505610 | Msa1296270 | 0.801272 | 9.734951e-49 | -8.615850e-47 |
| Msa0505610 | Msa1302920 | 0.817853 | 2.658846e-52 | -8.615850e-47 |
| Msa0505610 | Msa1326900 | 0.801828 | 7.487845e-49 | -8.615850e-47 |
| Msa0505610 | Msa1329660 | 0.849912 | 2.384545e-60 | -8.615850e-47 |
| Msa0505610 | Msa1329820 | 0.813160 | 2.945588e-51 | -8.615850e-47 |
| Msa0505610 | Msa1330910 | 0.821744 | 3.430987e-53 | -8.615850e-47 |
| Msa0505610 | Msa1336350 | 0.825522 | 4.477253e-54 | -8.615850e-47 |
| Msa0505610 | Msa1339310 | 0.825466 | 4.617570e-54 | -8.615850e-47 |
| Msa0505610 | Msa1342400 | 0.808531 | 2.958386e-50 | -8.615850e-47 |
| Msa0505610 | Msa1343540 | 0.827895 | 1.214914e-54 | -8.615850e-47 |
| Msa0505610 | Msa1351560 | 0.820475 | 6.726245e-53 | -8.615850e-47 |
| Msa0505610 | Msa1364520 | 0.810699 | 1.012454e-50 | -8.615850e-47 |
| Msa0505610 | Msa1368660 | 0.836789 | 7.617984e-57 | -8.615850e-47 |
| Msa0505610 | Msa1371260 | 0.801929 | 7.141398e-49 | -8.615850e-47 |
| Msa0505610 | Msa1381720 | 0.826076 | 3.307334e-54 | -8.615850e-47 |
| Msa0505610 | Msa1385940 | 0.834255 | 3.331073e-56 | -8.615850e-47 |
| Msa0505610 | Msa1388070 | 0.811252 | 7.683150e-51 | -8.615850e-47 |
| Msa0505610 | Msa1388270 | 0.819641 | 1.043715e-52 | -8.615850e-47 |
| Msa0505610 | Msa1393350 | 0.804365 | 2.236977e-49 | -8.615850e-47 |
| Msa0505610 | Msa1393600 | 0.828356 | 9.410436e-55 | -8.615850e-47 |
| Msa0505610 | Msa1395360 | 0.807069 | 6.052670e-50 | -8.615850e-47 |
| Msa0505610 | Msa1397550 | 0.809801 | 1.581098e-50 | -8.615850e-47 |
| Msa0505610 | Msa1400600 | 0.802811 | 4.699456e-49 | -8.615850e-47 |
| Msa0505610 | Msa1401000 | 0.810730 | 9.970134e-51 | -8.615850e-47 |
| Msa0505610 | Msa1413220 | 0.811033 | 8.570466e-51 | -8.615850e-47 |
| Msa0505610 | Msa1413880 | 0.805854 | 1.091734e-49 | -8.615850e-47 |
| Msa0505610 | Msa1426690 | 0.800568 | 1.356087e-48 | -8.615850e-47 |
| Msa0505610 | Msa1432250 | 0.811274 | 7.600880e-51 | -8.615850e-47 |
| Msa0505610 | Msa1433380 | 0.815185 | 1.052036e-51 | -8.615850e-47 |
| Msa0505610 | Msa1445700 | 0.801193 | 1.010647e-48 | -8.615850e-47 |
| Msa0505610 | Msa1446220 | 0.844438 | 7.561871e-59 | -8.615850e-47 |
| Msa0505610 | Msa1447990 | 0.805021 | 1.632091e-49 | -8.615850e-47 |
| Msa0505610 | Msa1450850 | 0.821487 | 3.934253e-53 | -8.615850e-47 |
| Msa0505610 | Msa1451690 | 0.816104 | 6.568889e-52 | -8.615850e-47 |
| Msa0505610 | Msa1452200 | 0.834918 | 2.270543e-56 | -8.615850e-47 |
| Msa0505610 | Msa1454320 | 0.801817 | 7.527967e-49 | -8.615850e-47 |
| Msa0505610 | Msa1459630 | 0.815679 | 8.169095e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505610 | MtrunA17_Chr3g0106801 | 84.884 | 516 | 77 | 1 | 1 | 515 | 1 | 516 | 0.0 | 847 |
| Msa0505610 | MtrunA17_Chr3g0106821 | 97.074 | 376 | 11 | 0 | 1 | 376 | 1 | 376 | 0.0 | 733 |
| Msa0505610 | MtrunA17_Chr5g0408921 | 36.945 | 563 | 298 | 12 | 1 | 511 | 1 | 558 | 7.69e-110 | 338 |
| Msa0505610 | MtrunA17_Chr7g0251871 | 35.856 | 555 | 307 | 10 | 1 | 511 | 1 | 550 | 1.79e-104 | 324 |
| Msa0505610 | MtrunA17_Chr8g0369621 | 37.833 | 563 | 297 | 13 | 1 | 513 | 42 | 601 | 8.21e-102 | 318 |
| Msa0505610 | MtrunA17_Chr3g0106831 | 97.600 | 125 | 3 | 0 | 391 | 515 | 1 | 125 | 4.47e-83 | 253 |
| Msa0505610 | MtrunA17_Chr4g0037301 | 31.629 | 528 | 337 | 8 | 3 | 511 | 11 | 533 | 2.51e-79 | 258 |
| Msa0505610 | MtrunA17_Chr5g0405621 | 30.502 | 518 | 340 | 7 | 7 | 512 | 13 | 522 | 2.29e-62 | 213 |
| Msa0505610 | MtrunA17_Chr2g0304561 | 29.174 | 545 | 340 | 11 | 8 | 511 | 13 | 552 | 8.11e-59 | 204 |
| Msa0505610 | MtrunA17_Chr4g0064981 | 28.832 | 548 | 345 | 14 | 8 | 511 | 12 | 558 | 2.16e-55 | 195 |
| Msa0505610 | MtrunA17_Chr7g0225191 | 26.678 | 566 | 352 | 9 | 7 | 512 | 15 | 577 | 2.11e-43 | 162 |
| Msa0505610 | MtrunA17_Chr1g0174101 | 27.869 | 549 | 338 | 9 | 5 | 511 | 22 | 554 | 8.61e-43 | 160 |
| Msa0505610 | MtrunA17_Chr7g0264861 | 26.471 | 544 | 361 | 8 | 5 | 511 | 27 | 568 | 2.92e-39 | 150 |
| Msa0505610 | MtrunA17_Chr1g0171591 | 26.619 | 556 | 345 | 10 | 5 | 511 | 22 | 563 | 3.75e-38 | 147 |
| Msa0505610 | MtrunA17_Chr1g0210291 | 26.987 | 541 | 352 | 11 | 5 | 511 | 23 | 554 | 1.07e-37 | 146 |
| Msa0505610 | MtrunA17_Chr3g0132161 | 23.519 | 557 | 360 | 8 | 7 | 513 | 15 | 555 | 3.26e-35 | 139 |
| Msa0505610 | MtrunA17_Chr5g0442481 | 26.577 | 523 | 360 | 9 | 7 | 513 | 11 | 525 | 1.96e-34 | 136 |
| Msa0505610 | MtrunA17_Chr1g0210274 | 26.160 | 539 | 360 | 11 | 5 | 511 | 24 | 556 | 6.85e-34 | 135 |
| Msa0505610 | MtrunA17_Chr2g0330551 | 24.176 | 546 | 361 | 12 | 1 | 511 | 1 | 528 | 1.16e-33 | 134 |
| Msa0505610 | MtrunA17_Chr1g0210284 | 25.830 | 542 | 358 | 11 | 5 | 511 | 24 | 556 | 6.81e-33 | 132 |
| Msa0505610 | MtrunA17_Chr2g0333371 | 28.033 | 239 | 140 | 5 | 276 | 511 | 79 | 288 | 5.55e-20 | 90.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0505610 | AT2G30300.1 | 50.095 | 525 | 225 | 8 | 1 | 514 | 1 | 499 | 2.24e-155 | 452 |
| Msa0505610 | AT5G45275.1 | 38.475 | 564 | 289 | 14 | 1 | 513 | 1 | 557 | 4.34e-112 | 344 |
| Msa0505610 | AT4G19450.1 | 39.292 | 565 | 281 | 14 | 1 | 511 | 1 | 557 | 2.78e-110 | 339 |
| Msa0505610 | AT1G31470.1 | 38.636 | 528 | 293 | 11 | 7 | 511 | 43 | 562 | 4.53e-102 | 318 |
| Msa0505610 | AT3G01630.1 | 36.245 | 538 | 293 | 12 | 7 | 511 | 23 | 543 | 5.02e-95 | 299 |
| Msa0505610 | AT3G01630.2 | 36.245 | 538 | 293 | 12 | 7 | 511 | 41 | 561 | 8.20e-95 | 299 |
| Msa0505610 | AT4G19450.2 | 38.995 | 418 | 203 | 11 | 1 | 373 | 1 | 411 | 5.96e-78 | 251 |
| Msa0505610 | AT4G34950.1 | 30.129 | 541 | 342 | 10 | 6 | 513 | 15 | 552 | 1.74e-71 | 238 |
| Msa0505610 | AT2G16660.1 | 31.169 | 539 | 328 | 9 | 2 | 513 | 9 | 531 | 1.22e-68 | 230 |
| Msa0505610 | AT1G80530.1 | 30.258 | 542 | 340 | 11 | 2 | 511 | 8 | 543 | 7.01e-64 | 218 |
| Msa0505610 | AT2G16660.2 | 31.658 | 398 | 233 | 8 | 2 | 376 | 9 | 390 | 5.83e-46 | 166 |
| Msa0505610 | AT5G50630.1 | 27.154 | 534 | 341 | 11 | 7 | 511 | 16 | 530 | 6.79e-45 | 166 |
| Msa0505610 | AT5G50520.1 | 27.154 | 534 | 341 | 11 | 7 | 511 | 16 | 530 | 6.79e-45 | 166 |
| Msa0505610 | AT2G28120.1 | 26.128 | 532 | 364 | 6 | 7 | 511 | 17 | 546 | 2.18e-43 | 162 |
| Msa0505610 | AT2G39210.1 | 26.534 | 554 | 356 | 11 | 1 | 511 | 10 | 555 | 5.66e-43 | 161 |
| Msa0505610 | AT5G14120.1 | 25.627 | 558 | 363 | 10 | 7 | 513 | 16 | 572 | 2.58e-41 | 156 |
| Msa0505610 | AT3G01930.2 | 25.177 | 564 | 363 | 10 | 7 | 513 | 16 | 577 | 3.08e-39 | 150 |
| Msa0505610 | AT1G74780.1 | 26.829 | 533 | 345 | 12 | 7 | 511 | 7 | 522 | 1.40e-38 | 148 |
| Msa0505610 | AT2G34355.1 | 25.094 | 534 | 348 | 11 | 7 | 513 | 7 | 515 | 9.28e-37 | 143 |
| Msa0505610 | AT1G18940.1 | 24.673 | 535 | 349 | 11 | 7 | 513 | 9 | 517 | 7.63e-35 | 137 |
| Msa0505610 | AT2G34350.1 | 23.660 | 541 | 359 | 10 | 1 | 512 | 1 | 516 | 1.77e-33 | 133 |
| Msa0505610 | AT2G34350.2 | 23.660 | 541 | 359 | 10 | 1 | 512 | 1 | 516 | 1.77e-33 | 133 |
| Msa0505610 | AT3G01930.3 | 25.185 | 405 | 256 | 8 | 7 | 366 | 16 | 418 | 1.48e-24 | 106 |
| Msa0505610 | AT2G34355.2 | 24.422 | 389 | 248 | 10 | 145 | 513 | 3 | 365 | 1.26e-20 | 94.0 |
| Msa0505610 | AT3G01930.1 | 23.707 | 464 | 295 | 10 | 107 | 513 | 3 | 464 | 2.23e-19 | 91.3 |
Find 95 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTATTTACCTTCCTTTA+TGG | 0.063933 | 3_4:+51200926 | Msa0505610:CDS |
| TCCTTAATCTTCACAGAAAT+TGG | 0.113544 | 3_4:-51201477 | None:intergenic |
| ATTTGTGTTTGTTCCATTTA+TGG | 0.143254 | 3_4:-51200788 | None:intergenic |
| AATGTCTCAGCTTTCTTATT+TGG | 0.170915 | 3_4:-51201216 | None:intergenic |
| TGTTGAGAAGAATAAATTTC+TGG | 0.186844 | 3_4:+51201664 | Msa0505610:CDS |
| TTTGGTATTTCTTAACAATT+TGG | 0.191912 | 3_4:+51201725 | Msa0505610:CDS |
| GTGTCTTTGTCTTCTGCTTT+TGG | 0.192683 | 3_4:+51201792 | Msa0505610:CDS |
| TCCTCACTTGGTGTGCTTAT+TGG | 0.193854 | 3_4:+51201420 | Msa0505610:CDS |
| TTGTTGTCTTGGAACTTTAT+TGG | 0.202596 | 3_4:+51202914 | Msa0505610:CDS |
| CCCAATTTCTGTGAAGATTA+AGG | 0.220888 | 3_4:+51201476 | Msa0505610:CDS |
| CTTATCATCGGTTCGTTTCT+CGG | 0.231656 | 3_4:+51200955 | Msa0505610:CDS |
| AATATGACATAGAAGAAATT+TGG | 0.235115 | 3_4:-51201017 | None:intergenic |
| TACACAAGCACTGCAGTAAT+TGG | 0.245797 | 3_4:+51202666 | Msa0505610:CDS |
| TCCACAACAACTGAGCTATT+TGG | 0.249847 | 3_4:+51202723 | Msa0505610:CDS |
| CTGTTCTGCTACTTCATCTT+TGG | 0.259954 | 3_4:+51201770 | Msa0505610:CDS |
| AAACAAACACTAGAATGTTT+AGG | 0.266198 | 3_4:-51201318 | None:intergenic |
| ATTGGTGTTATGGAAGAAAT+TGG | 0.266375 | 3_4:+51201630 | Msa0505610:CDS |
| AACAAACACTAGAATGTTTA+GGG | 0.279536 | 3_4:-51201317 | None:intergenic |
| ACGTCTCATTCCATCTCTTT+TGG | 0.289040 | 3_4:+51201824 | Msa0505610:CDS |
| TTCTTATTAACTTTCCTTGC+TGG | 0.290781 | 3_4:+51201048 | Msa0505610:CDS |
| ATTTGGCTCCAAGCCATAAA+TGG | 0.293960 | 3_4:+51200775 | Msa0505610:CDS |
| TAAGCCTAGTTGGCATCATT+TGG | 0.330549 | 3_4:+51200758 | Msa0505610:CDS |
| AAATTTCTTCTATGTCATAT+TGG | 0.331796 | 3_4:+51201019 | Msa0505610:CDS |
| AATTCAAGAGATTGGTGTTA+TGG | 0.341430 | 3_4:+51201620 | Msa0505610:CDS |
| TTTCTCGGACTAATCGGTTA+TGG | 0.348039 | 3_4:+51200970 | Msa0505610:CDS |
| TTGCTGGGAATAGCATTTGT+TGG | 0.369362 | 3_4:+51201064 | Msa0505610:CDS |
| TTGGTATTTCTTAACAATTT+GGG | 0.377031 | 3_4:+51201726 | Msa0505610:CDS |
| AGAAATAAAAGCAACAATAT+TGG | 0.377396 | 3_4:-51201193 | None:intergenic |
| TACTGCAGTGCTTGTGTAAA+GGG | 0.379851 | 3_4:-51202661 | None:intergenic |
| TCTTATTAACTTTCCTTGCT+GGG | 0.386250 | 3_4:+51201049 | Msa0505610:CDS |
| TTTGTTATTACAATTGCAAC+TGG | 0.387762 | 3_4:+51201351 | Msa0505610:CDS |
| GGTTCGTTTCTCGGACTAAT+CGG | 0.394038 | 3_4:+51200964 | Msa0505610:CDS |
| CCTTAATCTTCACAGAAATT+GGG | 0.415851 | 3_4:-51201476 | None:intergenic |
| ATTGAGCTCCACTTGTGAAA+TGG | 0.421525 | 3_4:-51200848 | None:intergenic |
| AGTTGTGAAATTCAAGAGAT+TGG | 0.423500 | 3_4:+51201612 | Msa0505610:CDS |
| TATTCTCCTCCATGGTGAAA+TGG | 0.428451 | 3_4:-51201545 | None:intergenic |
| GCAGTAATTGGAGTTTCTAC+TGG | 0.428724 | 3_4:+51202678 | Msa0505610:CDS |
| TGGAAAGAAGTTGTTTGAGC+TGG | 0.431341 | 3_4:-51200828 | None:intergenic |
| AGCTGAGTAACCAAACAAAA+AGG | 0.441737 | 3_4:-51202802 | None:intergenic |
| CATAGAGAATGAAGTAAAAG+AGG | 0.445172 | 3_4:+51201581 | Msa0505610:CDS |
| TGTTTGTTCCATTTATGGCT+TGG | 0.449184 | 3_4:-51200783 | None:intergenic |
| ACTATTATACCAACTACAAC+TGG | 0.450801 | 3_4:-51201261 | None:intergenic |
| TAAAGTTCCAAGACAACAAA+AGG | 0.451891 | 3_4:-51202910 | None:intergenic |
| ATGATAAGGACGAGCCATAA+AGG | 0.458991 | 3_4:-51200940 | None:intergenic |
| GGATTAACAACTAGTTATCA+AGG | 0.460309 | 3_4:+51201150 | Msa0505610:CDS |
| CTTCAATGGCTAAGCCTAGT+TGG | 0.461205 | 3_4:+51200748 | Msa0505610:CDS |
| TGTCTTCTTCTACTCTTCAA+TGG | 0.465890 | 3_4:+51200734 | Msa0505610:CDS |
| AAGAAGAATGCAAATGTTGT+TGG | 0.467873 | 3_4:-51202615 | None:intergenic |
| TTCGATCGGCAAGTTGCCGT+TGG | 0.472775 | 3_4:+51201129 | Msa0505610:CDS |
| GGAAAGAAGTTGTTTGAGCT+GGG | 0.475761 | 3_4:-51200827 | None:intergenic |
| TGCCACTATAGTAGCAGTTA+TGG | 0.477489 | 3_4:+51202590 | Msa0505610:CDS |
| TTCACTATTATTCTCCTCCA+TGG | 0.479663 | 3_4:-51201553 | None:intergenic |
| TTATGGCTCGTCCTTATCAT+CGG | 0.483897 | 3_4:+51200943 | Msa0505610:CDS |
| CGAGAAACGAACCGATGATA+AGG | 0.498548 | 3_4:-51200954 | None:intergenic |
| TTAAGGAACTCTTAGAATCA+TGG | 0.502848 | 3_4:+51201493 | Msa0505610:CDS |
| GCACTTATTTACCGTGGTGA+AGG | 0.504829 | 3_4:+51202825 | Msa0505610:CDS |
| TTACTGCAGTGCTTGTGTAA+AGG | 0.505172 | 3_4:-51202662 | None:intergenic |
| TCTCTTATACCAGTTGTAGT+TGG | 0.512589 | 3_4:+51201252 | Msa0505610:CDS |
| ACAGAAATTGGGAGTAAAAG+AGG | 0.514863 | 3_4:-51201465 | None:intergenic |
| GCCAAATAGCTCAGTTGTTG+TGG | 0.519172 | 3_4:-51202724 | None:intergenic |
| CGTGGTGAAGGGAATGAACA+TGG | 0.521353 | 3_4:+51202837 | Msa0505610:CDS |
| TACGAAACTTTATATTCGAT+CGG | 0.522301 | 3_4:+51201115 | Msa0505610:CDS |
| CACTTATTTACCGTGGTGAA+GGG | 0.524996 | 3_4:+51202826 | Msa0505610:CDS |
| TGACATAGAAGAAATTTGGT+TGG | 0.527278 | 3_4:-51201013 | None:intergenic |
| TTGAGCTGGGAAGAGTAAGC+AGG | 0.528252 | 3_4:-51200814 | None:intergenic |
| ATAGAGAATGAAGTAAAAGA+GGG | 0.528255 | 3_4:+51201582 | Msa0505610:CDS |
| GGAGCCAAATGATGCCAACT+AGG | 0.537028 | 3_4:-51200762 | None:intergenic |
| TGTAAATCATAATGTAGTTG+TGG | 0.538384 | 3_4:+51202761 | Msa0505610:CDS |
| ACTTCTTTCCATTTCACAAG+TGG | 0.541328 | 3_4:+51200840 | Msa0505610:CDS |
| TGCCATAACTGCTACTATAG+TGG | 0.544260 | 3_4:-51202592 | None:intergenic |
| GTTGTGGCAAATATTCCAAT+GGG | 0.544685 | 3_4:+51202777 | Msa0505610:CDS |
| ACCAATAAGCACACCAAGTG+AGG | 0.550160 | 3_4:-51201421 | None:intergenic |
| TAGAAGTAGTCCAAAAGAGA+TGG | 0.550728 | 3_4:-51201834 | None:intergenic |
| ATCGAATATAAAGTTTCGTA+TGG | 0.555333 | 3_4:-51201112 | None:intergenic |
| ATAACTAGTTGTTAATCCAA+CGG | 0.572986 | 3_4:-51201145 | None:intergenic |
| AGTTGTGGCAAATATTCCAA+TGG | 0.576400 | 3_4:+51202776 | Msa0505610:CDS |
| ATAACTGCTACTATAGTGGC+AGG | 0.578194 | 3_4:-51202588 | None:intergenic |
| GAATGAACATGGGAAATGCA+TGG | 0.579212 | 3_4:+51202848 | Msa0505610:CDS |
| ACTTTAATTTCTCTTACTAG+AGG | 0.582711 | 3_4:-51201288 | None:intergenic |
| AATGAACATGGGAAATGCAT+GGG | 0.586706 | 3_4:+51202849 | Msa0505610:CDS |
| ACAAACAAAATATCCTCACT+TGG | 0.588126 | 3_4:+51201408 | Msa0505610:CDS |
| CAGTGCTTGTGTAAAGGGCA+AGG | 0.600030 | 3_4:-51202656 | None:intergenic |
| AACAAATGCTATTCCCAGCA+AGG | 0.604864 | 3_4:-51201062 | None:intergenic |
| ACATGGGAAATGCATGGGCA+TGG | 0.611694 | 3_4:+51202854 | Msa0505610:CDS |
| TGAGCTGGGAAGAGTAAGCA+GGG | 0.624570 | 3_4:-51200813 | None:intergenic |
| TAAGGACGAGCCATAAAGGA+AGG | 0.629213 | 3_4:-51200936 | None:intergenic |
| GGACAAATAGCTGAATCAAG+AGG | 0.632165 | 3_4:+51201747 | Msa0505610:CDS |
| AGTTGTTGTGGAAATAGCAG+TGG | 0.639364 | 3_4:-51202712 | None:intergenic |
| CAGCATCGGATGCAAAAGCA+AGG | 0.662018 | 3_4:-51200873 | None:intergenic |
| CATGTTCATTCCCTTCACCA+CGG | 0.670222 | 3_4:-51202836 | None:intergenic |
| AAGGAAGGTAAATAGCAGCA+AGG | 0.673778 | 3_4:-51200921 | None:intergenic |
| TCAGCTGCACTTATTTACCG+TGG | 0.674454 | 3_4:+51202819 | Msa0505610:CDS |
| GTGGTGAAGGGAATGAACAT+GGG | 0.684893 | 3_4:+51202838 | Msa0505610:CDS |
| AATCTACCATTTCACCATGG+AGG | 0.703159 | 3_4:+51201539 | Msa0505610:CDS |
| AAGAATCTACCATTTCACCA+TGG | 0.716797 | 3_4:+51201536 | Msa0505610:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATTATCTTGAAAATAT+AGG | - | chr3_4:51202249-51202268 | None:intergenic | 10.0% |
| !!! | TTCAAGATAATTTTTATTTA+AGG | + | chr3_4:51202254-51202273 | Msa0505610:intron | 10.0% |
| !!! | AATAATAATTTTAATTTCAG+GGG | + | chr3_4:51202546-51202565 | Msa0505610:intron | 10.0% |
| !! | AAAAATTATCTTGAAAATAT+AGG | - | chr3_4:51202249-51202268 | None:intergenic | 10.0% |
| !!! | TTCAAGATAATTTTTATTTA+AGG | + | chr3_4:51202254-51202273 | Msa0505610:intron | 10.0% |
| !!! | AATAATAATTTTAATTTCAG+GGG | + | chr3_4:51202546-51202565 | Msa0505610:intron | 10.0% |
| !!! | TATTTCTTTGTGTATTTTTT+TGG | + | chr3_4:51201690-51201709 | Msa0505610:CDS | 15.0% |
| !! | AATATAAATAAAGAATCATG+TGG | - | chr3_4:51201895-51201914 | None:intergenic | 15.0% |
| !! | AAATTGTAAAAATTTAGTGT+CGG | - | chr3_4:51202058-51202077 | None:intergenic | 15.0% |
| !!! | TATTTCTTTGTGTATTTTTT+TGG | + | chr3_4:51201690-51201709 | Msa0505610:CDS | 15.0% |
| !! | AATATAAATAAAGAATCATG+TGG | - | chr3_4:51201895-51201914 | None:intergenic | 15.0% |
| !! | AAATTGTAAAAATTTAGTGT+CGG | - | chr3_4:51202058-51202077 | None:intergenic | 15.0% |
| !! | AATATGACATAGAAGAAATT+TGG | - | chr3_4:51201020-51201039 | None:intergenic | 20.0% |
| !! | AAATTTCTTCTATGTCATAT+TGG | + | chr3_4:51201019-51201038 | Msa0505610:CDS | 20.0% |
| !! | AGAAATAAAAGCAACAATAT+TGG | - | chr3_4:51201196-51201215 | None:intergenic | 20.0% |
| !! | TTTGGTATTTCTTAACAATT+TGG | + | chr3_4:51201725-51201744 | Msa0505610:CDS | 20.0% |
| !! | TTGGTATTTCTTAACAATTT+GGG | + | chr3_4:51201726-51201745 | Msa0505610:CDS | 20.0% |
| !! | CAAAATATTGACACTATATA+CGG | - | chr3_4:51202095-51202114 | None:intergenic | 20.0% |
| !!! | AATATCACTGCTTTTTTTAA+AGG | + | chr3_4:51202121-51202140 | Msa0505610:intron | 20.0% |
| !!! | GTTATGCTACATTTTAAAAA+GGG | - | chr3_4:51202316-51202335 | None:intergenic | 20.0% |
| !!! | TGTTATGCTACATTTTAAAA+AGG | - | chr3_4:51202317-51202336 | None:intergenic | 20.0% |
| !! | ATTTAATGCAATAATGACAA+TGG | + | chr3_4:51202366-51202385 | Msa0505610:intron | 20.0% |
| !! | AATATGACATAGAAGAAATT+TGG | - | chr3_4:51201020-51201039 | None:intergenic | 20.0% |
| !! | AAATTTCTTCTATGTCATAT+TGG | + | chr3_4:51201019-51201038 | Msa0505610:CDS | 20.0% |
| !! | AGAAATAAAAGCAACAATAT+TGG | - | chr3_4:51201196-51201215 | None:intergenic | 20.0% |
| !! | TTTGGTATTTCTTAACAATT+TGG | + | chr3_4:51201725-51201744 | Msa0505610:CDS | 20.0% |
| !! | TTGGTATTTCTTAACAATTT+GGG | + | chr3_4:51201726-51201745 | Msa0505610:CDS | 20.0% |
| !! | CAAAATATTGACACTATATA+CGG | - | chr3_4:51202095-51202114 | None:intergenic | 20.0% |
| !!! | AATATCACTGCTTTTTTTAA+AGG | + | chr3_4:51202121-51202140 | Msa0505610:intron | 20.0% |
| !!! | GTTATGCTACATTTTAAAAA+GGG | - | chr3_4:51202316-51202335 | None:intergenic | 20.0% |
| !!! | TGTTATGCTACATTTTAAAA+AGG | - | chr3_4:51202317-51202336 | None:intergenic | 20.0% |
| !! | ATTTAATGCAATAATGACAA+TGG | + | chr3_4:51202366-51202385 | Msa0505610:intron | 20.0% |
| ! | ATTTGTGTTTGTTCCATTTA+TGG | - | chr3_4:51200791-51200810 | None:intergenic | 25.0% |
| ! | ATCGAATATAAAGTTTCGTA+TGG | - | chr3_4:51201115-51201134 | None:intergenic | 25.0% |
| ! | TACGAAACTTTATATTCGAT+CGG | + | chr3_4:51201115-51201134 | Msa0505610:CDS | 25.0% |
| ! | ATAACTAGTTGTTAATCCAA+CGG | - | chr3_4:51201148-51201167 | None:intergenic | 25.0% |
| !! | ACTTTAATTTCTCTTACTAG+AGG | - | chr3_4:51201291-51201310 | None:intergenic | 25.0% |
| ! | AACAAACACTAGAATGTTTA+GGG | - | chr3_4:51201320-51201339 | None:intergenic | 25.0% |
| ! | AAACAAACACTAGAATGTTT+AGG | - | chr3_4:51201321-51201340 | None:intergenic | 25.0% |
| !!! | TTTGTTATTACAATTGCAAC+TGG | + | chr3_4:51201351-51201370 | Msa0505610:CDS | 25.0% |
| ! | ATAGAGAATGAAGTAAAAGA+GGG | + | chr3_4:51201582-51201601 | Msa0505610:CDS | 25.0% |
| ! | TGTTGAGAAGAATAAATTTC+TGG | + | chr3_4:51201664-51201683 | Msa0505610:CDS | 25.0% |
| !!! | TATTTTTTTGGTGCAACTAT+TGG | + | chr3_4:51201702-51201721 | Msa0505610:CDS | 25.0% |
| ! | ACTCTAATGCAACTAATTTA+TGG | + | chr3_4:51201942-51201961 | Msa0505610:intron | 25.0% |
| !! | GAAAATTTTCGTTGCAATTT+AGG | - | chr3_4:51202000-51202019 | None:intergenic | 25.0% |
| ! | GGTTATTAAGCAACAAAATT+AGG | + | chr3_4:51202172-51202191 | Msa0505610:intron | 25.0% |
| !!! | ATAAATGCCATGATTTTAGT+TGG | - | chr3_4:51202340-51202359 | None:intergenic | 25.0% |
| !!! | GAAGAGGCTTTTAATTTTTT+TGG | - | chr3_4:51202429-51202448 | None:intergenic | 25.0% |
| ! | GCTAGTAACATTGAAAATAT+AGG | - | chr3_4:51202501-51202520 | None:intergenic | 25.0% |
| ! | TGTAAATCATAATGTAGTTG+TGG | + | chr3_4:51202761-51202780 | Msa0505610:CDS | 25.0% |
| !! | ATAGCAACACTTTTATCATT+TGG | + | chr3_4:51202883-51202902 | Msa0505610:CDS | 25.0% |
| !! | TAGCAACACTTTTATCATTT+GGG | + | chr3_4:51202884-51202903 | Msa0505610:CDS | 25.0% |
| !!! | TGGCTTTGATTCTATATTTT+AGG | + | chr3_4:51202934-51202953 | Msa0505610:CDS | 25.0% |
| ! | ATTTGTGTTTGTTCCATTTA+TGG | - | chr3_4:51200791-51200810 | None:intergenic | 25.0% |
| ! | ATCGAATATAAAGTTTCGTA+TGG | - | chr3_4:51201115-51201134 | None:intergenic | 25.0% |
| ! | TACGAAACTTTATATTCGAT+CGG | + | chr3_4:51201115-51201134 | Msa0505610:CDS | 25.0% |
| ! | ATAACTAGTTGTTAATCCAA+CGG | - | chr3_4:51201148-51201167 | None:intergenic | 25.0% |
| !! | ACTTTAATTTCTCTTACTAG+AGG | - | chr3_4:51201291-51201310 | None:intergenic | 25.0% |
| ! | AACAAACACTAGAATGTTTA+GGG | - | chr3_4:51201320-51201339 | None:intergenic | 25.0% |
| ! | AAACAAACACTAGAATGTTT+AGG | - | chr3_4:51201321-51201340 | None:intergenic | 25.0% |
| !!! | TTTGTTATTACAATTGCAAC+TGG | + | chr3_4:51201351-51201370 | Msa0505610:CDS | 25.0% |
| ! | ATAGAGAATGAAGTAAAAGA+GGG | + | chr3_4:51201582-51201601 | Msa0505610:CDS | 25.0% |
| ! | TGTTGAGAAGAATAAATTTC+TGG | + | chr3_4:51201664-51201683 | Msa0505610:CDS | 25.0% |
| !!! | TATTTTTTTGGTGCAACTAT+TGG | + | chr3_4:51201702-51201721 | Msa0505610:CDS | 25.0% |
| ! | ACTCTAATGCAACTAATTTA+TGG | + | chr3_4:51201942-51201961 | Msa0505610:intron | 25.0% |
| !! | GAAAATTTTCGTTGCAATTT+AGG | - | chr3_4:51202000-51202019 | None:intergenic | 25.0% |
| ! | GGTTATTAAGCAACAAAATT+AGG | + | chr3_4:51202172-51202191 | Msa0505610:intron | 25.0% |
| !!! | ATAAATGCCATGATTTTAGT+TGG | - | chr3_4:51202340-51202359 | None:intergenic | 25.0% |
| !!! | GAAGAGGCTTTTAATTTTTT+TGG | - | chr3_4:51202429-51202448 | None:intergenic | 25.0% |
| ! | GCTAGTAACATTGAAAATAT+AGG | - | chr3_4:51202501-51202520 | None:intergenic | 25.0% |
| ! | TGTAAATCATAATGTAGTTG+TGG | + | chr3_4:51202761-51202780 | Msa0505610:CDS | 25.0% |
| !! | ATAGCAACACTTTTATCATT+TGG | + | chr3_4:51202883-51202902 | Msa0505610:CDS | 25.0% |
| !! | TAGCAACACTTTTATCATTT+GGG | + | chr3_4:51202884-51202903 | Msa0505610:CDS | 25.0% |
| !!! | TGGCTTTGATTCTATATTTT+AGG | + | chr3_4:51202934-51202953 | Msa0505610:CDS | 25.0% |
| !!! | AAACTTTTTGGTTGGTTTTC+TGG | + | chr3_4:51200898-51200917 | Msa0505610:CDS | 30.0% |
| TGACATAGAAGAAATTTGGT+TGG | - | chr3_4:51201016-51201035 | None:intergenic | 30.0% | |
| TTCTTATTAACTTTCCTTGC+TGG | + | chr3_4:51201048-51201067 | Msa0505610:CDS | 30.0% | |
| TCTTATTAACTTTCCTTGCT+GGG | + | chr3_4:51201049-51201068 | Msa0505610:CDS | 30.0% | |
| GGATTAACAACTAGTTATCA+AGG | + | chr3_4:51201150-51201169 | Msa0505610:CDS | 30.0% | |
| AATGTCTCAGCTTTCTTATT+TGG | - | chr3_4:51201219-51201238 | None:intergenic | 30.0% | |
| ACTATTATACCAACTACAAC+TGG | - | chr3_4:51201264-51201283 | None:intergenic | 30.0% | |
| ACAAACAAAATATCCTCACT+TGG | + | chr3_4:51201408-51201427 | Msa0505610:CDS | 30.0% | |
| CCTTAATCTTCACAGAAATT+GGG | - | chr3_4:51201479-51201498 | None:intergenic | 30.0% | |
| TCCTTAATCTTCACAGAAAT+TGG | - | chr3_4:51201480-51201499 | None:intergenic | 30.0% | |
| TTAAGGAACTCTTAGAATCA+TGG | + | chr3_4:51201493-51201512 | Msa0505610:CDS | 30.0% | |
| CATAGAGAATGAAGTAAAAG+AGG | + | chr3_4:51201581-51201600 | Msa0505610:CDS | 30.0% | |
| AGTTGTGAAATTCAAGAGAT+TGG | + | chr3_4:51201612-51201631 | Msa0505610:CDS | 30.0% | |
| !! | AATTCAAGAGATTGGTGTTA+TGG | + | chr3_4:51201620-51201639 | Msa0505610:CDS | 30.0% |
| !! | ATTGGTGTTATGGAAGAAAT+TGG | + | chr3_4:51201630-51201649 | Msa0505610:CDS | 30.0% |
| !! | TCTTCTGCTTTTGGATTTTT+TGG | + | chr3_4:51201801-51201820 | Msa0505610:CDS | 30.0% |
| GACTACTTCTATAGGTAATA+TGG | + | chr3_4:51201846-51201865 | Msa0505610:intron | 30.0% | |
| TTTAAAAAGGGTCTCACTAA+CGG | - | chr3_4:51202304-51202323 | None:intergenic | 30.0% | |
| CATAACACCAACTAAAATCA+TGG | + | chr3_4:51202330-51202349 | Msa0505610:intron | 30.0% | |
| ! | AATAATGACAATGGTGATGT+TGG | + | chr3_4:51202375-51202394 | Msa0505610:intron | 30.0% |
| AAGAAGAATGCAAATGTTGT+TGG | - | chr3_4:51202618-51202637 | None:intergenic | 30.0% | |
| ! | AGCAACACTTTTATCATTTG+GGG | + | chr3_4:51202885-51202904 | Msa0505610:CDS | 30.0% |
| TAAAGTTCCAAGACAACAAA+AGG | - | chr3_4:51202913-51202932 | None:intergenic | 30.0% | |
| TTGTTGTCTTGGAACTTTAT+TGG | + | chr3_4:51202914-51202933 | Msa0505610:CDS | 30.0% | |
| ! | GTTTTACGCACATAAACAAT+AGG | + | chr3_4:51202965-51202984 | Msa0505610:CDS | 30.0% |
| !!! | AAACTTTTTGGTTGGTTTTC+TGG | + | chr3_4:51200898-51200917 | Msa0505610:CDS | 30.0% |
| TGACATAGAAGAAATTTGGT+TGG | - | chr3_4:51201016-51201035 | None:intergenic | 30.0% | |
| TTCTTATTAACTTTCCTTGC+TGG | + | chr3_4:51201048-51201067 | Msa0505610:CDS | 30.0% | |
| TCTTATTAACTTTCCTTGCT+GGG | + | chr3_4:51201049-51201068 | Msa0505610:CDS | 30.0% | |
| GGATTAACAACTAGTTATCA+AGG | + | chr3_4:51201150-51201169 | Msa0505610:CDS | 30.0% | |
| AATGTCTCAGCTTTCTTATT+TGG | - | chr3_4:51201219-51201238 | None:intergenic | 30.0% | |
| ACTATTATACCAACTACAAC+TGG | - | chr3_4:51201264-51201283 | None:intergenic | 30.0% | |
| ACAAACAAAATATCCTCACT+TGG | + | chr3_4:51201408-51201427 | Msa0505610:CDS | 30.0% | |
| CCTTAATCTTCACAGAAATT+GGG | - | chr3_4:51201479-51201498 | None:intergenic | 30.0% | |
| TCCTTAATCTTCACAGAAAT+TGG | - | chr3_4:51201480-51201499 | None:intergenic | 30.0% | |
| TTAAGGAACTCTTAGAATCA+TGG | + | chr3_4:51201493-51201512 | Msa0505610:CDS | 30.0% | |
| CATAGAGAATGAAGTAAAAG+AGG | + | chr3_4:51201581-51201600 | Msa0505610:CDS | 30.0% | |
| AGTTGTGAAATTCAAGAGAT+TGG | + | chr3_4:51201612-51201631 | Msa0505610:CDS | 30.0% | |
| !! | AATTCAAGAGATTGGTGTTA+TGG | + | chr3_4:51201620-51201639 | Msa0505610:CDS | 30.0% |
| !! | ATTGGTGTTATGGAAGAAAT+TGG | + | chr3_4:51201630-51201649 | Msa0505610:CDS | 30.0% |
| !! | TCTTCTGCTTTTGGATTTTT+TGG | + | chr3_4:51201801-51201820 | Msa0505610:CDS | 30.0% |
| GACTACTTCTATAGGTAATA+TGG | + | chr3_4:51201846-51201865 | Msa0505610:intron | 30.0% | |
| TTTAAAAAGGGTCTCACTAA+CGG | - | chr3_4:51202304-51202323 | None:intergenic | 30.0% | |
| CATAACACCAACTAAAATCA+TGG | + | chr3_4:51202330-51202349 | Msa0505610:intron | 30.0% | |
| ! | AATAATGACAATGGTGATGT+TGG | + | chr3_4:51202375-51202394 | Msa0505610:intron | 30.0% |
| AAGAAGAATGCAAATGTTGT+TGG | - | chr3_4:51202618-51202637 | None:intergenic | 30.0% | |
| ! | AGCAACACTTTTATCATTTG+GGG | + | chr3_4:51202885-51202904 | Msa0505610:CDS | 30.0% |
| TAAAGTTCCAAGACAACAAA+AGG | - | chr3_4:51202913-51202932 | None:intergenic | 30.0% | |
| TTGTTGTCTTGGAACTTTAT+TGG | + | chr3_4:51202914-51202933 | Msa0505610:CDS | 30.0% | |
| ! | GTTTTACGCACATAAACAAT+AGG | + | chr3_4:51202965-51202984 | Msa0505610:CDS | 30.0% |
| TGTCTTCTTCTACTCTTCAA+TGG | + | chr3_4:51200734-51200753 | Msa0505610:CDS | 35.0% | |
| TGTTTGTTCCATTTATGGCT+TGG | - | chr3_4:51200786-51200805 | None:intergenic | 35.0% | |
| ACTTCTTTCCATTTCACAAG+TGG | + | chr3_4:51200840-51200859 | Msa0505610:CDS | 35.0% | |
| ! | CTGCTATTTACCTTCCTTTA+TGG | + | chr3_4:51200926-51200945 | Msa0505610:CDS | 35.0% |
| TCTCTTATACCAGTTGTAGT+TGG | + | chr3_4:51201252-51201271 | Msa0505610:CDS | 35.0% | |
| ACAGAAATTGGGAGTAAAAG+AGG | - | chr3_4:51201468-51201487 | None:intergenic | 35.0% | |
| CCCAATTTCTGTGAAGATTA+AGG | + | chr3_4:51201476-51201495 | Msa0505610:CDS | 35.0% | |
| CATGGCACAAAAAAAGAGAA+AGG | + | chr3_4:51201511-51201530 | Msa0505610:CDS | 35.0% | |
| AAGAATCTACCATTTCACCA+TGG | + | chr3_4:51201536-51201555 | Msa0505610:CDS | 35.0% | |
| TTCACTATTATTCTCCTCCA+TGG | - | chr3_4:51201556-51201575 | None:intergenic | 35.0% | |
| !! | TTTTGGTGCAACTATTGGTT+TGG | + | chr3_4:51201707-51201726 | Msa0505610:CDS | 35.0% |
| TAGAAGTAGTCCAAAAGAGA+TGG | - | chr3_4:51201837-51201856 | None:intergenic | 35.0% | |
| ! | CTCTTTTGGACTACTTCTAT+AGG | + | chr3_4:51201838-51201857 | Msa0505610:CDS | 35.0% |
| ATTCCTTAACTAGTGCTTCT+GGG | + | chr3_4:51202277-51202296 | Msa0505610:intron | 35.0% | |
| AGTTGTGGCAAATATTCCAA+TGG | + | chr3_4:51202776-51202795 | Msa0505610:CDS | 35.0% | |
| GTTGTGGCAAATATTCCAAT+GGG | + | chr3_4:51202777-51202796 | Msa0505610:CDS | 35.0% | |
| AGCTGAGTAACCAAACAAAA+AGG | - | chr3_4:51202805-51202824 | None:intergenic | 35.0% | |
| AATGAACATGGGAAATGCAT+GGG | + | chr3_4:51202849-51202868 | Msa0505610:CDS | 35.0% | |
| TGTCTTCTTCTACTCTTCAA+TGG | + | chr3_4:51200734-51200753 | Msa0505610:CDS | 35.0% | |
| TGTTTGTTCCATTTATGGCT+TGG | - | chr3_4:51200786-51200805 | None:intergenic | 35.0% | |
| ACTTCTTTCCATTTCACAAG+TGG | + | chr3_4:51200840-51200859 | Msa0505610:CDS | 35.0% | |
| ! | CTGCTATTTACCTTCCTTTA+TGG | + | chr3_4:51200926-51200945 | Msa0505610:CDS | 35.0% |
| TCTCTTATACCAGTTGTAGT+TGG | + | chr3_4:51201252-51201271 | Msa0505610:CDS | 35.0% | |
| ACAGAAATTGGGAGTAAAAG+AGG | - | chr3_4:51201468-51201487 | None:intergenic | 35.0% | |
| CCCAATTTCTGTGAAGATTA+AGG | + | chr3_4:51201476-51201495 | Msa0505610:CDS | 35.0% | |
| CATGGCACAAAAAAAGAGAA+AGG | + | chr3_4:51201511-51201530 | Msa0505610:CDS | 35.0% | |
| AAGAATCTACCATTTCACCA+TGG | + | chr3_4:51201536-51201555 | Msa0505610:CDS | 35.0% | |
| TTCACTATTATTCTCCTCCA+TGG | - | chr3_4:51201556-51201575 | None:intergenic | 35.0% | |
| !! | TTTTGGTGCAACTATTGGTT+TGG | + | chr3_4:51201707-51201726 | Msa0505610:CDS | 35.0% |
| TAGAAGTAGTCCAAAAGAGA+TGG | - | chr3_4:51201837-51201856 | None:intergenic | 35.0% | |
| ! | CTCTTTTGGACTACTTCTAT+AGG | + | chr3_4:51201838-51201857 | Msa0505610:CDS | 35.0% |
| ATTCCTTAACTAGTGCTTCT+GGG | + | chr3_4:51202277-51202296 | Msa0505610:intron | 35.0% | |
| AGTTGTGGCAAATATTCCAA+TGG | + | chr3_4:51202776-51202795 | Msa0505610:CDS | 35.0% | |
| GTTGTGGCAAATATTCCAAT+GGG | + | chr3_4:51202777-51202796 | Msa0505610:CDS | 35.0% | |
| AGCTGAGTAACCAAACAAAA+AGG | - | chr3_4:51202805-51202824 | None:intergenic | 35.0% | |
| AATGAACATGGGAAATGCAT+GGG | + | chr3_4:51202849-51202868 | Msa0505610:CDS | 35.0% | |
| TAAGCCTAGTTGGCATCATT+TGG | + | chr3_4:51200758-51200777 | Msa0505610:CDS | 40.0% | |
| ! | ATTTGGCTCCAAGCCATAAA+TGG | + | chr3_4:51200775-51200794 | Msa0505610:CDS | 40.0% |
| GGAAAGAAGTTGTTTGAGCT+GGG | - | chr3_4:51200830-51200849 | None:intergenic | 40.0% | |
| TGGAAAGAAGTTGTTTGAGC+TGG | - | chr3_4:51200831-51200850 | None:intergenic | 40.0% | |
| ATTGAGCTCCACTTGTGAAA+TGG | - | chr3_4:51200851-51200870 | None:intergenic | 40.0% | |
| ACCAAAAAGTTTGCCAGCAT+CGG | - | chr3_4:51200890-51200909 | None:intergenic | 40.0% | |
| !! | ATGCTGGCAAACTTTTTGGT+TGG | + | chr3_4:51200890-51200909 | Msa0505610:CDS | 40.0% |
| AAGGAAGGTAAATAGCAGCA+AGG | - | chr3_4:51200924-51200943 | None:intergenic | 40.0% | |
| ATGATAAGGACGAGCCATAA+AGG | - | chr3_4:51200943-51200962 | None:intergenic | 40.0% | |
| TTATGGCTCGTCCTTATCAT+CGG | + | chr3_4:51200943-51200962 | Msa0505610:CDS | 40.0% | |
| !! | CTTATCATCGGTTCGTTTCT+CGG | + | chr3_4:51200955-51200974 | Msa0505610:CDS | 40.0% |
| TTTCTCGGACTAATCGGTTA+TGG | + | chr3_4:51200970-51200989 | Msa0505610:CDS | 40.0% | |
| AACAAATGCTATTCCCAGCA+AGG | - | chr3_4:51201065-51201084 | None:intergenic | 40.0% | |
| TTGCTGGGAATAGCATTTGT+TGG | + | chr3_4:51201064-51201083 | Msa0505610:CDS | 40.0% | |
| AATCTACCATTTCACCATGG+AGG | + | chr3_4:51201539-51201558 | Msa0505610:CDS | 40.0% | |
| TATTCTCCTCCATGGTGAAA+TGG | - | chr3_4:51201548-51201567 | None:intergenic | 40.0% | |
| GGACAAATAGCTGAATCAAG+AGG | + | chr3_4:51201747-51201766 | Msa0505610:CDS | 40.0% | |
| ! | CTGTTCTGCTACTTCATCTT+TGG | + | chr3_4:51201770-51201789 | Msa0505610:CDS | 40.0% |
| ! | GTGTCTTTGTCTTCTGCTTT+TGG | + | chr3_4:51201792-51201811 | Msa0505610:CDS | 40.0% |
| ! | ACGTCTCATTCCATCTCTTT+TGG | + | chr3_4:51201824-51201843 | Msa0505610:CDS | 40.0% |
| CAATTTAGGCAGCAACTTCA+AGG | - | chr3_4:51201986-51202005 | None:intergenic | 40.0% | |
| GATTCCTTAACTAGTGCTTC+TGG | + | chr3_4:51202276-51202295 | Msa0505610:intron | 40.0% | |
| ! | AGCCTCTTCTCTTATTGACT+TGG | + | chr3_4:51202440-51202459 | Msa0505610:intron | 40.0% |
| AGCCAAGTCAATAAGAGAAG+AGG | - | chr3_4:51202445-51202464 | None:intergenic | 40.0% | |
| ATAACTGCTACTATAGTGGC+AGG | - | chr3_4:51202591-51202610 | None:intergenic | 40.0% | |
| TGCCACTATAGTAGCAGTTA+TGG | + | chr3_4:51202590-51202609 | Msa0505610:CDS | 40.0% | |
| TGCCATAACTGCTACTATAG+TGG | - | chr3_4:51202595-51202614 | None:intergenic | 40.0% | |
| TACTGCAGTGCTTGTGTAAA+GGG | - | chr3_4:51202664-51202683 | None:intergenic | 40.0% | |
| TTACTGCAGTGCTTGTGTAA+AGG | - | chr3_4:51202665-51202684 | None:intergenic | 40.0% | |
| ! | TACACAAGCACTGCAGTAAT+TGG | + | chr3_4:51202666-51202685 | Msa0505610:CDS | 40.0% |
| GCAGTAATTGGAGTTTCTAC+TGG | + | chr3_4:51202678-51202697 | Msa0505610:CDS | 40.0% | |
| AGTTGTTGTGGAAATAGCAG+TGG | - | chr3_4:51202715-51202734 | None:intergenic | 40.0% | |
| TCCACAACAACTGAGCTATT+TGG | + | chr3_4:51202723-51202742 | Msa0505610:CDS | 40.0% | |
| CCAAACAAAAAGGATCCCAT+TGG | - | chr3_4:51202795-51202814 | None:intergenic | 40.0% | |
| ! | CCAATGGGATCCTTTTTGTT+TGG | + | chr3_4:51202792-51202811 | Msa0505610:CDS | 40.0% |
| CACTTATTTACCGTGGTGAA+GGG | + | chr3_4:51202826-51202845 | Msa0505610:CDS | 40.0% | |
| GAATGAACATGGGAAATGCA+TGG | + | chr3_4:51202848-51202867 | Msa0505610:CDS | 40.0% | |
| TAAGCCTAGTTGGCATCATT+TGG | + | chr3_4:51200758-51200777 | Msa0505610:CDS | 40.0% | |
| ! | ATTTGGCTCCAAGCCATAAA+TGG | + | chr3_4:51200775-51200794 | Msa0505610:CDS | 40.0% |
| GGAAAGAAGTTGTTTGAGCT+GGG | - | chr3_4:51200830-51200849 | None:intergenic | 40.0% | |
| TGGAAAGAAGTTGTTTGAGC+TGG | - | chr3_4:51200831-51200850 | None:intergenic | 40.0% | |
| ATTGAGCTCCACTTGTGAAA+TGG | - | chr3_4:51200851-51200870 | None:intergenic | 40.0% | |
| ACCAAAAAGTTTGCCAGCAT+CGG | - | chr3_4:51200890-51200909 | None:intergenic | 40.0% | |
| !! | ATGCTGGCAAACTTTTTGGT+TGG | + | chr3_4:51200890-51200909 | Msa0505610:CDS | 40.0% |
| AAGGAAGGTAAATAGCAGCA+AGG | - | chr3_4:51200924-51200943 | None:intergenic | 40.0% | |
| ATGATAAGGACGAGCCATAA+AGG | - | chr3_4:51200943-51200962 | None:intergenic | 40.0% | |
| TTATGGCTCGTCCTTATCAT+CGG | + | chr3_4:51200943-51200962 | Msa0505610:CDS | 40.0% | |
| !! | CTTATCATCGGTTCGTTTCT+CGG | + | chr3_4:51200955-51200974 | Msa0505610:CDS | 40.0% |
| TTTCTCGGACTAATCGGTTA+TGG | + | chr3_4:51200970-51200989 | Msa0505610:CDS | 40.0% | |
| AACAAATGCTATTCCCAGCA+AGG | - | chr3_4:51201065-51201084 | None:intergenic | 40.0% | |
| TTGCTGGGAATAGCATTTGT+TGG | + | chr3_4:51201064-51201083 | Msa0505610:CDS | 40.0% | |
| AATCTACCATTTCACCATGG+AGG | + | chr3_4:51201539-51201558 | Msa0505610:CDS | 40.0% | |
| TATTCTCCTCCATGGTGAAA+TGG | - | chr3_4:51201548-51201567 | None:intergenic | 40.0% | |
| GGACAAATAGCTGAATCAAG+AGG | + | chr3_4:51201747-51201766 | Msa0505610:CDS | 40.0% | |
| ! | CTGTTCTGCTACTTCATCTT+TGG | + | chr3_4:51201770-51201789 | Msa0505610:CDS | 40.0% |
| ! | GTGTCTTTGTCTTCTGCTTT+TGG | + | chr3_4:51201792-51201811 | Msa0505610:CDS | 40.0% |
| ! | ACGTCTCATTCCATCTCTTT+TGG | + | chr3_4:51201824-51201843 | Msa0505610:CDS | 40.0% |
| CAATTTAGGCAGCAACTTCA+AGG | - | chr3_4:51201986-51202005 | None:intergenic | 40.0% | |
| GATTCCTTAACTAGTGCTTC+TGG | + | chr3_4:51202276-51202295 | Msa0505610:intron | 40.0% | |
| ! | AGCCTCTTCTCTTATTGACT+TGG | + | chr3_4:51202440-51202459 | Msa0505610:intron | 40.0% |
| AGCCAAGTCAATAAGAGAAG+AGG | - | chr3_4:51202445-51202464 | None:intergenic | 40.0% | |
| ATAACTGCTACTATAGTGGC+AGG | - | chr3_4:51202591-51202610 | None:intergenic | 40.0% | |
| TGCCACTATAGTAGCAGTTA+TGG | + | chr3_4:51202590-51202609 | Msa0505610:CDS | 40.0% | |
| TGCCATAACTGCTACTATAG+TGG | - | chr3_4:51202595-51202614 | None:intergenic | 40.0% | |
| TACTGCAGTGCTTGTGTAAA+GGG | - | chr3_4:51202664-51202683 | None:intergenic | 40.0% | |
| TTACTGCAGTGCTTGTGTAA+AGG | - | chr3_4:51202665-51202684 | None:intergenic | 40.0% | |
| ! | TACACAAGCACTGCAGTAAT+TGG | + | chr3_4:51202666-51202685 | Msa0505610:CDS | 40.0% |
| GCAGTAATTGGAGTTTCTAC+TGG | + | chr3_4:51202678-51202697 | Msa0505610:CDS | 40.0% | |
| AGTTGTTGTGGAAATAGCAG+TGG | - | chr3_4:51202715-51202734 | None:intergenic | 40.0% | |
| TCCACAACAACTGAGCTATT+TGG | + | chr3_4:51202723-51202742 | Msa0505610:CDS | 40.0% | |
| CCAAACAAAAAGGATCCCAT+TGG | - | chr3_4:51202795-51202814 | None:intergenic | 40.0% | |
| ! | CCAATGGGATCCTTTTTGTT+TGG | + | chr3_4:51202792-51202811 | Msa0505610:CDS | 40.0% |
| CACTTATTTACCGTGGTGAA+GGG | + | chr3_4:51202826-51202845 | Msa0505610:CDS | 40.0% | |
| GAATGAACATGGGAAATGCA+TGG | + | chr3_4:51202848-51202867 | Msa0505610:CDS | 40.0% | |
| CTTCAATGGCTAAGCCTAGT+TGG | + | chr3_4:51200748-51200767 | Msa0505610:CDS | 45.0% | |
| ! | TCCGATGCTGGCAAACTTTT+TGG | + | chr3_4:51200886-51200905 | Msa0505610:CDS | 45.0% |
| TAAGGACGAGCCATAAAGGA+AGG | - | chr3_4:51200939-51200958 | None:intergenic | 45.0% | |
| CGAGAAACGAACCGATGATA+AGG | - | chr3_4:51200957-51200976 | None:intergenic | 45.0% | |
| GGTTCGTTTCTCGGACTAAT+CGG | + | chr3_4:51200964-51200983 | Msa0505610:CDS | 45.0% | |
| !! | TCCTCACTTGGTGTGCTTAT+TGG | + | chr3_4:51201420-51201439 | Msa0505610:CDS | 45.0% |
| ACCAATAAGCACACCAAGTG+AGG | - | chr3_4:51201424-51201443 | None:intergenic | 45.0% | |
| GAATGCTAACTAGTGCTCAG+AGG | + | chr3_4:51202145-51202164 | Msa0505610:intron | 45.0% | |
| ! | TAACTAGTGCTCAGAGGCAT+TGG | + | chr3_4:51202151-51202170 | Msa0505610:intron | 45.0% |
| GCCAAATAGCTCAGTTGTTG+TGG | - | chr3_4:51202727-51202746 | None:intergenic | 45.0% | |
| TCAGCTGCACTTATTTACCG+TGG | + | chr3_4:51202819-51202838 | Msa0505610:CDS | 45.0% | |
| GCACTTATTTACCGTGGTGA+AGG | + | chr3_4:51202825-51202844 | Msa0505610:CDS | 45.0% | |
| CATGTTCATTCCCTTCACCA+CGG | - | chr3_4:51202839-51202858 | None:intergenic | 45.0% | |
| GTGGTGAAGGGAATGAACAT+GGG | + | chr3_4:51202838-51202857 | Msa0505610:CDS | 45.0% | |
| !! | TGGGGTTCCTTTTGTTGTCT+TGG | + | chr3_4:51202903-51202922 | Msa0505610:CDS | 45.0% |
| CTTCAATGGCTAAGCCTAGT+TGG | + | chr3_4:51200748-51200767 | Msa0505610:CDS | 45.0% | |
| ! | TCCGATGCTGGCAAACTTTT+TGG | + | chr3_4:51200886-51200905 | Msa0505610:CDS | 45.0% |
| TAAGGACGAGCCATAAAGGA+AGG | - | chr3_4:51200939-51200958 | None:intergenic | 45.0% | |
| CGAGAAACGAACCGATGATA+AGG | - | chr3_4:51200957-51200976 | None:intergenic | 45.0% | |
| GGTTCGTTTCTCGGACTAAT+CGG | + | chr3_4:51200964-51200983 | Msa0505610:CDS | 45.0% | |
| !! | TCCTCACTTGGTGTGCTTAT+TGG | + | chr3_4:51201420-51201439 | Msa0505610:CDS | 45.0% |
| ACCAATAAGCACACCAAGTG+AGG | - | chr3_4:51201424-51201443 | None:intergenic | 45.0% | |
| GAATGCTAACTAGTGCTCAG+AGG | + | chr3_4:51202145-51202164 | Msa0505610:intron | 45.0% | |
| ! | TAACTAGTGCTCAGAGGCAT+TGG | + | chr3_4:51202151-51202170 | Msa0505610:intron | 45.0% |
| GCCAAATAGCTCAGTTGTTG+TGG | - | chr3_4:51202727-51202746 | None:intergenic | 45.0% | |
| TCAGCTGCACTTATTTACCG+TGG | + | chr3_4:51202819-51202838 | Msa0505610:CDS | 45.0% | |
| GCACTTATTTACCGTGGTGA+AGG | + | chr3_4:51202825-51202844 | Msa0505610:CDS | 45.0% | |
| CATGTTCATTCCCTTCACCA+CGG | - | chr3_4:51202839-51202858 | None:intergenic | 45.0% | |
| GTGGTGAAGGGAATGAACAT+GGG | + | chr3_4:51202838-51202857 | Msa0505610:CDS | 45.0% | |
| !! | TGGGGTTCCTTTTGTTGTCT+TGG | + | chr3_4:51202903-51202922 | Msa0505610:CDS | 45.0% |
| !!! | TTAATAATAATTTTAATTTC+AGG | + | chr3_4:51202544-51202563 | Msa0505610:intron | 5.0% |
| !!! | TAATAATAATTTTAATTTCA+GGG | + | chr3_4:51202545-51202564 | Msa0505610:intron | 5.0% |
| !!! | TTAATAATAATTTTAATTTC+AGG | + | chr3_4:51202544-51202563 | Msa0505610:intron | 5.0% |
| !!! | TAATAATAATTTTAATTTCA+GGG | + | chr3_4:51202545-51202564 | Msa0505610:intron | 5.0% |
| GGAGCCAAATGATGCCAACT+AGG | - | chr3_4:51200765-51200784 | None:intergenic | 50.0% | |
| TGAGCTGGGAAGAGTAAGCA+GGG | - | chr3_4:51200816-51200835 | None:intergenic | 50.0% | |
| TTGAGCTGGGAAGAGTAAGC+AGG | - | chr3_4:51200817-51200836 | None:intergenic | 50.0% | |
| ! | CAGCATCGGATGCAAAAGCA+AGG | - | chr3_4:51200876-51200895 | None:intergenic | 50.0% |
| !! | CTTGCTTTTGCATCCGATGC+TGG | + | chr3_4:51200874-51200893 | Msa0505610:CDS | 50.0% |
| !! | GGTCCCAGAAGCACTAGTTA+AGG | - | chr3_4:51202283-51202302 | None:intergenic | 50.0% |
| CAGTGCTTGTGTAAAGGGCA+AGG | - | chr3_4:51202659-51202678 | None:intergenic | 50.0% | |
| CGTGGTGAAGGGAATGAACA+TGG | + | chr3_4:51202837-51202856 | Msa0505610:CDS | 50.0% | |
| ACATGGGAAATGCATGGGCA+TGG | + | chr3_4:51202854-51202873 | Msa0505610:CDS | 50.0% | |
| GGAGCCAAATGATGCCAACT+AGG | - | chr3_4:51200765-51200784 | None:intergenic | 50.0% | |
| TGAGCTGGGAAGAGTAAGCA+GGG | - | chr3_4:51200816-51200835 | None:intergenic | 50.0% | |
| TTGAGCTGGGAAGAGTAAGC+AGG | - | chr3_4:51200817-51200836 | None:intergenic | 50.0% | |
| ! | CAGCATCGGATGCAAAAGCA+AGG | - | chr3_4:51200876-51200895 | None:intergenic | 50.0% |
| !! | CTTGCTTTTGCATCCGATGC+TGG | + | chr3_4:51200874-51200893 | Msa0505610:CDS | 50.0% |
| !! | GGTCCCAGAAGCACTAGTTA+AGG | - | chr3_4:51202283-51202302 | None:intergenic | 50.0% |
| CAGTGCTTGTGTAAAGGGCA+AGG | - | chr3_4:51202659-51202678 | None:intergenic | 50.0% | |
| CGTGGTGAAGGGAATGAACA+TGG | + | chr3_4:51202837-51202856 | Msa0505610:CDS | 50.0% | |
| ACATGGGAAATGCATGGGCA+TGG | + | chr3_4:51202854-51202873 | Msa0505610:CDS | 50.0% | |
| TTCGATCGGCAAGTTGCCGT+TGG | + | chr3_4:51201129-51201148 | Msa0505610:CDS | 55.0% | |
| TTCGATCGGCAAGTTGCCGT+TGG | + | chr3_4:51201129-51201148 | Msa0505610:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 51200694 | 51203045 | 51200694 | ID=Msa0505610;Name=Msa0505610 |
| chr3_4 | mRNA | 51200694 | 51203045 | 51200694 | ID=Msa0505610-mRNA-1;Parent=Msa0505610;Name=Msa0505610-mRNA-1;_AED=0.01;_eAED=0.01;_QI=39|1|1|1|1|1|2|59|515 |
| chr3_4 | exon | 51200694 | 51201859 | 51200694 | ID=Msa0505610-mRNA-1:exon:11157;Parent=Msa0505610-mRNA-1 |
| chr3_4 | exon | 51202566 | 51203045 | 51202566 | ID=Msa0505610-mRNA-1:exon:11158;Parent=Msa0505610-mRNA-1 |
| chr3_4 | five_prime_UTR | 51200694 | 51200732 | 51200694 | ID=Msa0505610-mRNA-1:five_prime_utr;Parent=Msa0505610-mRNA-1 |
| chr3_4 | CDS | 51200733 | 51201859 | 51200733 | ID=Msa0505610-mRNA-1:cds;Parent=Msa0505610-mRNA-1 |
| chr3_4 | CDS | 51202566 | 51202986 | 51202566 | ID=Msa0505610-mRNA-1:cds;Parent=Msa0505610-mRNA-1 |
| chr3_4 | three_prime_UTR | 51202987 | 51203045 | 51202987 | ID=Msa0505610-mRNA-1:three_prime_utr;Parent=Msa0505610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
