AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0512770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0512770 MtrunA17_Chr3g0120131 94.792 480 23 1 1 478 1 480 0.0 951
Msa0512770 MtrunA17_Chr3g0119721 96.386 332 12 0 147 478 11 342 0.0 676
Msa0512770 MtrunA17_Chr3g0131051 64.042 381 135 1 97 477 110 488 1.81e-175 505
Msa0512770 MtrunA17_Chr7g0265451 55.754 391 160 3 97 485 138 517 3.01e-159 464
Msa0512770 MtrunA17_Chr7g0265461 54.034 409 169 3 71 477 4 395 6.02e-158 457
Msa0512770 MtrunA17_Chr1g0179651 61.290 341 128 2 146 485 4 341 1.43e-154 446
Msa0512770 MtrunA17_Chr3g0137491 59.347 337 134 2 144 477 52 388 4.18e-144 421
Msa0512770 MtrunA17_Chr4g0064471 51.804 388 179 3 96 477 82 467 1.07e-140 416
Msa0512770 MtrunA17_Chr4g0064411 50.510 392 184 6 92 477 72 459 8.14e-133 395
Msa0512770 MtrunA17_Chr4g0064461 48.969 388 189 4 96 477 78 462 1.11e-126 379
Msa0512770 MtrunA17_Chr1g0146181 45.455 396 198 5 89 480 206 587 3.19e-108 336
Msa0512770 MtrunA17_Chr4g0055991 46.518 359 182 5 126 477 178 533 1.16e-107 333
Msa0512770 MtrunA17_Chr7g0265381 44.357 381 195 5 100 476 3 370 2.29e-106 324
Msa0512770 MtrunA17_Chr1g0197381 43.915 378 193 7 106 477 181 545 7.82e-104 323
Msa0512770 MtrunA17_Chr8g0390121 42.494 393 207 6 89 476 228 606 1.27e-103 325
Msa0512770 MtrunA17_Chr3g0140131 46.221 344 178 3 137 476 250 590 1.31e-102 322
Msa0512770 MtrunA17_Chr3g0140141 44.101 356 189 4 125 476 199 548 2.03e-100 314
Msa0512770 MtrunA17_Chr5g0411991 35.838 346 206 6 135 474 74 409 6.21e-70 231
Msa0512770 MtrunA17_Chr7g0253441 34.054 370 217 10 125 482 129 483 9.36e-56 195
Msa0512770 MtrunA17_Chr3g0119731 93.243 74 5 0 73 146 1 74 9.20e-43 147
Msa0512770 MtrunA17_Chr5g0421571 35.211 213 125 5 135 344 127 329 8.92e-31 122
Msa0512770 MtrunA17_Chr8g0385671 25.890 309 205 6 182 471 81 384 1.32e-27 115
Msa0512770 MtrunA17_Chr8g0385651 27.010 311 199 8 182 471 81 384 1.03e-26 112
Msa0512770 MtrunA17_Chr2g0320251 28.221 326 191 13 151 445 85 398 4.10e-23 102
Msa0512770 MtrunA17_Chr4g0028201 26.836 354 210 14 153 471 105 444 1.07e-22 101
Msa0512770 MtrunA17_Chr3g0092341 27.676 383 215 18 152 484 112 482 9.71e-22 98.6
Msa0512770 MtrunA17_Chr6g0460631 26.578 301 198 10 185 471 174 465 3.11e-19 90.9
Msa0512770 MtrunA17_Chr8g0377331 25.649 308 210 8 177 471 97 398 8.66e-19 89.0
Msa0512770 MtrunA17_Chr4g0043801 24.825 286 185 10 192 457 158 433 3.18e-17 84.7
Msa0512770 MtrunA17_Chr3g0122631 25.939 293 194 10 194 471 116 400 3.64e-16 80.9
Msa0512770 MtrunA17_Chr7g0254391 25.510 294 192 10 194 471 188 470 2.60e-15 79.0
Msa0512770 MtrunA17_Chr5g0436111 28.877 187 114 4 115 301 14 181 1.25e-13 72.0
Msa0512770 MtrunA17_Chr4g0039811 25.877 228 148 8 246 457 224 446 1.75e-11 66.6
Msa0512770 MtrunA17_Chr1g0200871 25.839 298 182 10 194 456 139 432 2.94e-11 65.9
Msa0512770 MtrunA17_Chr1g0159421 27.612 268 165 12 186 436 118 373 3.06e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0512770 AT3G07620.1 68.063 382 119 3 99 478 76 456 0.0 551
Msa0512770 AT5G03795.1 57.963 383 155 1 96 478 137 513 2.38e-154 452
Msa0512770 AT5G25310.1 52.196 387 173 5 95 477 98 476 4.11e-142 419
Msa0512770 AT5G11130.1 50.900 389 175 6 99 477 91 473 2.08e-135 402
Msa0512770 AT5G11130.2 53.313 332 149 3 151 478 1 330 2.41e-126 374
Msa0512770 AT5G20260.2 46.154 442 206 8 39 477 50 462 5.87e-126 378
Msa0512770 AT3G42180.1 50.639 391 182 3 96 477 77 465 1.05e-124 375
Msa0512770 AT5G33290.1 50.418 359 167 3 128 477 139 495 3.13e-121 367
Msa0512770 AT3G42180.4 50.893 336 156 2 151 477 1 336 3.35e-115 345
Msa0512770 AT4G16745.1 45.918 392 195 6 101 485 156 537 5.92e-115 352
Msa0512770 AT5G20260.3 50.448 335 163 3 146 477 23 357 4.14e-113 341
Msa0512770 AT5G20260.1 50.606 330 160 3 151 477 1 330 1.33e-112 338
Msa0512770 AT4G32790.1 44.503 382 194 6 100 476 222 590 2.79e-104 326
Msa0512770 AT4G32790.3 44.503 382 194 6 100 476 222 590 2.79e-104 326
Msa0512770 AT4G32790.2 44.503 382 194 6 100 476 222 590 2.79e-104 326
Msa0512770 AT5G19670.1 44.348 345 184 3 137 476 263 604 1.25e-103 325
Msa0512770 AT5G19670.2 44.348 345 184 3 137 476 263 604 1.25e-103 325
Msa0512770 AT4G16745.2 44.744 371 188 6 101 464 156 516 2.16e-103 323
Msa0512770 AT5G25820.1 44.321 361 188 8 124 476 294 649 4.02e-96 306
Msa0512770 AT5G37000.1 38.983 413 230 7 82 476 140 548 4.72e-96 303
Msa0512770 AT5G11610.1 39.948 383 211 8 99 476 174 542 7.49e-94 298
Msa0512770 AT4G38040.1 35.549 346 207 6 135 474 84 419 2.24e-65 219
Msa0512770 AT5G11610.2 37.024 289 164 7 99 383 174 448 7.26e-58 200
Msa0512770 AT4G38040.2 34.161 322 196 6 135 450 84 395 5.73e-53 186
Msa0512770 AT5G11610.3 37.952 166 91 3 99 262 174 329 2.97e-30 122
Msa0512770 AT1G27440.1 26.214 309 204 7 182 471 77 380 1.16e-27 115
Msa0512770 AT5G61840.1 24.781 343 224 9 155 471 49 383 3.87e-25 108
Msa0512770 AT2G28110.1 26.246 301 194 9 194 471 138 433 5.76e-21 96.3
Msa0512770 AT1G74680.1 28.522 291 190 8 189 467 144 428 7.92e-21 95.9
Msa0512770 AT1G67410.1 26.871 294 197 8 188 467 113 402 1.16e-20 95.1
Msa0512770 AT5G22940.2 25.078 319 200 11 186 477 175 481 5.35e-19 90.5
Msa0512770 AT5G22940.1 25.078 319 200 11 186 477 146 452 5.74e-19 90.5
Msa0512770 AT3G45400.1 27.304 293 188 8 194 471 154 436 2.12e-18 88.6
Msa0512770 AT2G35100.1 24.912 285 181 10 192 457 125 395 5.69e-18 87.0
Msa0512770 AT3G03650.1 27.667 300 189 11 189 472 188 475 8.62e-17 84.0
Msa0512770 AT5G16890.1 24.296 284 185 11 191 457 182 452 1.14e-13 73.9
Msa0512770 AT5G44930.2 27.632 228 131 11 245 453 175 387 1.81e-12 70.1
Msa0512770 AT5G44930.1 27.632 228 131 11 245 453 175 387 1.81e-12 70.1
Msa0512770 AT1G34270.1 28.814 236 138 10 246 456 195 425 5.64e-11 65.5

Find 116 sgRNAs with CRISPR-Local

Find 252 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTGCATTGATCTTCTTAT+AGG 0.128865 3_4:+62690700 None:intergenic
GGGAATATTTATCAACTTAT+TGG 0.144366 3_4:-62689527 Msa0512770:CDS
CCTGTTACCAAGTTGATTTC+AGG 0.167077 3_4:+62689084 None:intergenic
TGCAGGAATCTACCTGCTTA+TGG 0.235704 3_4:-62687494 Msa0512770:intron
TAAATTGCCTCAACAATTCT+TGG 0.244588 3_4:+62688835 None:intergenic
GGAAATGATGCATCTTTCTT+TGG 0.250368 3_4:+62689105 None:intergenic
ACAATTCTGGCTTTCTTTGC+AGG 0.251792 3_4:-62689018 Msa0512770:CDS
ATTCATTTGATGGTGCAAAA+TGG 0.259684 3_4:-62691019 Msa0512770:CDS
TATTCGTGACAAAGCTGTTT+TGG 0.263997 3_4:-62689404 Msa0512770:CDS
ACAGCTTTGTCACGAATAAC+TGG 0.273001 3_4:+62689409 None:intergenic
TATTGTTGTGATATTATAAT+AGG 0.275605 3_4:+62688799 None:intergenic
GCTTATGGATATGGTTGTTT+TGG 0.286009 3_4:-62687479 Msa0512770:CDS
ATATGATTATTCATTCTATA+TGG 0.288339 3_4:-62688585 Msa0512770:CDS
TACTCATCTTCATTGTTTCA+TGG 0.291583 3_4:+62688896 None:intergenic
AGGATCATAACAACACTAAA+TGG 0.293875 3_4:+62689448 None:intergenic
CCTGAAATCAACTTGGTAAC+AGG 0.294494 3_4:-62689084 Msa0512770:CDS
TACAATGGAGAATTGAATTT+AGG 0.295142 3_4:-62690733 Msa0512770:CDS
TCATGCTTTCTTGTCATGAT+TGG 0.298264 3_4:-62689303 Msa0512770:CDS
TTGATAATTCAATGAGTAAT+GGG 0.306989 3_4:+62690971 None:intergenic
ATATAGGAGTTACCACTTAA+TGG 0.323102 3_4:-62689635 Msa0512770:intron
GTAAGCCTGGACAGACTTCT+AGG 0.323297 3_4:-62687440 Msa0512770:CDS
TAGCAGGAAGGATCTTCTTC+TGG 0.323400 3_4:+62687875 None:intergenic
AATGCAAGGAGATAGAAATT+TGG 0.324834 3_4:-62690686 Msa0512770:CDS
CAACTTTCCAGGCTAAAGTA+TGG 0.325379 3_4:-62687849 Msa0512770:CDS
TTTGGTATCGATTCATTTGA+TGG 0.329652 3_4:-62691029 Msa0512770:CDS
AATCTACCTGCTTATGGATA+TGG 0.331529 3_4:-62687488 Msa0512770:CDS
CATGCTTTCTTGTCATGATT+GGG 0.337722 3_4:-62689302 Msa0512770:intron
AACAAAATTTCCTTAAGCTT+GGG 0.346625 3_4:+62688709 None:intergenic
TAAATTCAATTCTCCATTGT+AGG 0.358796 3_4:+62690735 None:intergenic
TAGTGAAATTCCCAAGCTTA+AGG 0.365820 3_4:-62688719 Msa0512770:CDS
TGAAATACATCATATCTCTT+AGG 0.369121 3_4:+62688607 None:intergenic
CAATCAAGAACATCACTAAA+AGG 0.369286 3_4:+62688769 None:intergenic
TCCTGCTATAACAACTTTCC+AGG 0.381638 3_4:-62687860 Msa0512770:CDS
TGTTTATGACTTTATGTAGA+TGG 0.383733 3_4:-62687395 Msa0512770:three_prime_UTR
CAACAAAATTTCCTTAAGCT+TGG 0.385217 3_4:+62688708 None:intergenic
TATGACTAGTACCAACAGTA+TGG 0.392781 3_4:+62687929 None:intergenic
TATCACACAAATATGCATAT+TGG 0.394028 3_4:-62689351 Msa0512770:CDS
AAGTAGACATGAGCTTCATT+TGG 0.398848 3_4:+62689475 None:intergenic
TTCACATACCATGTTGCCCT+TGG 0.411752 3_4:+62689189 None:intergenic
AGAAATTTGGAGAAGGTTGA+AGG 0.417058 3_4:-62690673 Msa0512770:CDS
TAAATAGCTTCTCCATTAAG+TGG 0.424602 3_4:+62689623 None:intergenic
TTCATTTGATGGTGCAAAAT+GGG 0.424953 3_4:-62691018 Msa0512770:CDS
TTATTCATTCTATATGGCTT+AGG 0.447096 3_4:-62688579 Msa0512770:CDS
TTTGTACATGTAGGAGGATG+AGG 0.448328 3_4:-62690776 Msa0512770:intron
AACATGGAACAGAACAATTC+TGG 0.451636 3_4:-62689031 Msa0512770:CDS
TATCTTTGTTCTTCCAATGT+TGG 0.453246 3_4:+62688962 None:intergenic
TTTGATAATTCAATGAGTAA+TGG 0.455088 3_4:+62690970 None:intergenic
CATGACAAGAAAGCATGAAA+TGG 0.462671 3_4:+62689308 None:intergenic
GCCTGGAAAGTTGTTATAGC+AGG 0.463018 3_4:+62687859 None:intergenic
GAAACATGTGAAAGTAAGCC+TGG 0.464132 3_4:-62687453 Msa0512770:CDS
CTTGCCACTTCCCACCCACT+TGG 0.464582 3_4:+62688859 None:intergenic
TCTCTCGTCTCATTCTTTGA+CGG 0.473591 3_4:+62691157 None:intergenic
TTGCAAGAATATATATTCAA+TGG 0.476651 3_4:-62689551 Msa0512770:CDS
GCATATTGGAATAGAAGTTA+TGG 0.477539 3_4:-62689337 Msa0512770:CDS
GACCGTCCCATACTTTAGCC+TGG 0.479999 3_4:+62687842 None:intergenic
AAGAGGCAGTACGGTGTCAT+TGG 0.482673 3_4:+62690603 None:intergenic
TTGGTAACAGGAGAAACAAC+AGG 0.491020 3_4:-62689072 Msa0512770:CDS
TTCATTCTATATGGCTTAGG+AGG 0.491295 3_4:-62688576 Msa0512770:CDS
CTTGAAAGGTAAGTAATACA+TGG 0.496221 3_4:+62687903 None:intergenic
GGAGAAACAACAGGTTTACT+TGG 0.502236 3_4:-62689063 Msa0512770:CDS
TTGTACATGTAGGAGGATGA+GGG 0.505853 3_4:-62690775 Msa0512770:intron
ATGGCACACTCTCTTACATC+AGG 0.507892 3_4:+62687808 None:intergenic
TTGTCCAAGTGGGTGGGAAG+TGG 0.510845 3_4:-62688863 Msa0512770:CDS
ATTGTATTTGTCCAAGTGGG+TGG 0.518103 3_4:-62688870 Msa0512770:CDS
ATACACCTTGTATGATGAAA+GGG 0.521451 3_4:+62690920 None:intergenic
AGGTCATGAAACACAAAAGT+TGG 0.524304 3_4:+62687964 None:intergenic
TATACACCTTGTATGATGAA+AGG 0.534728 3_4:+62690919 None:intergenic
AGAATTGTTCTGTTCCATGT+TGG 0.536389 3_4:+62689033 None:intergenic
GTCAATTGTACCCATACTGT+TGG 0.538189 3_4:-62687940 Msa0512770:CDS
GAAATATATAAGATTGCAAG+AGG 0.540677 3_4:-62688671 Msa0512770:CDS
ATTCAATGAGTAATGGGGTG+TGG 0.547831 3_4:+62690977 None:intergenic
AAACAACCATATCCATAAGC+AGG 0.551051 3_4:+62687482 None:intergenic
CTACACCTAGAAGTCTGTCC+AGG 0.552663 3_4:+62687435 None:intergenic
GTGTAGTTAATTAAATATGA+TGG 0.553692 3_4:-62687418 Msa0512770:exon
ATTACTCATTGAATTATCAA+AGG 0.556943 3_4:-62690968 Msa0512770:CDS
ATCATTTCCTGAAATCAACT+TGG 0.557019 3_4:-62689091 Msa0512770:CDS
CTGGGTGAAAGAGATGTTCA+AGG 0.557117 3_4:+62689428 None:intergenic
AGGAGATAGAAATTTGGAGA+AGG 0.557354 3_4:-62690680 Msa0512770:CDS
AATACATCATATCTCTTAGG+AGG 0.557887 3_4:+62688610 None:intergenic
TTCCAATGTTGGAAAAGCAA+TGG 0.557955 3_4:+62688973 None:intergenic
ATCTACCCTTTCATCATACA+AGG 0.560213 3_4:-62690925 Msa0512770:intron
TACTTGGTGGCTATCCAACA+TGG 0.562509 3_4:-62689047 Msa0512770:CDS
GAAACAACAGGTTTACTTGG+TGG 0.562533 3_4:-62689060 Msa0512770:CDS
ATTGAATATATATTCTTGCA+AGG 0.562749 3_4:+62689553 None:intergenic
AACTTTCCAGGCTAAAGTAT+GGG 0.564439 3_4:-62687848 Msa0512770:CDS
CAAGAATATATATTCAATGG+AGG 0.575833 3_4:-62689548 Msa0512770:CDS
TATAAGACAATGGCCTACAA+TGG 0.581787 3_4:-62690748 Msa0512770:CDS
GGTGTCATTGGTTCTCAACA+AGG 0.582461 3_4:+62690615 None:intergenic
ATCCTACCTATGAAAAGCAA+AGG 0.584468 3_4:+62690534 None:intergenic
AGAGTCCTCAAGAGGCAGTA+CGG 0.587025 3_4:+62690594 None:intergenic
TTGTATTTGTCCAAGTGGGT+GGG 0.588230 3_4:-62688869 Msa0512770:CDS
AATATTGTATTTGTCCAAGT+GGG 0.593695 3_4:-62688873 Msa0512770:CDS
ACTTTGCAATGCAAATATCT+CGG 0.598690 3_4:-62689139 Msa0512770:CDS
TTCTTTGCAGGACAAATGCA+TGG 0.604295 3_4:-62689006 Msa0512770:CDS
AAGAATATATATTCAATGGA+GGG 0.605925 3_4:-62689547 Msa0512770:CDS
ATGACTAGTACCAACAGTAT+GGG 0.610332 3_4:+62687930 None:intergenic
GGCAAGTCCAAGAATTGTTG+AGG 0.611209 3_4:-62688842 Msa0512770:CDS
TAATCATGAGAGTCCTCAAG+AGG 0.613023 3_4:+62690586 None:intergenic
GGGTGTGGATGCATACATCT+TGG 0.614821 3_4:+62690992 None:intergenic
TTTCTGTAGATGTCTCCTTG+TGG 0.615421 3_4:+62690559 None:intergenic
AAATATTGTATTTGTCCAAG+TGG 0.615905 3_4:-62688874 Msa0512770:CDS
GCACACTCTCTTACATCAGG+TGG 0.617930 3_4:+62687811 None:intergenic
CAGCTTTGTCACGAATAACT+GGG 0.619899 3_4:+62689410 None:intergenic
TATAGGGACCAAGGGCAACA+TGG 0.622985 3_4:-62689197 Msa0512770:intron
TGACACCGTACTGCCTCTTG+AGG 0.624877 3_4:-62690599 Msa0512770:CDS
GCTAAAGTATGGGACGGTCA+AGG 0.629484 3_4:-62687838 Msa0512770:CDS
AAGGGCAACATGGTATGTGA+AGG 0.631000 3_4:-62689187 Msa0512770:CDS
TGATAATTCAATGAGTAATG+GGG 0.632019 3_4:+62690972 None:intergenic
CCTATAAGAAGATCAATGCA+AGG 0.636919 3_4:-62690700 Msa0512770:CDS
TTCCAGGCTAAAGTATGGGA+CGG 0.638739 3_4:-62687844 Msa0512770:CDS
GGAAAGTTGTTATAGCAGGA+AGG 0.640337 3_4:+62687863 None:intergenic
AAAGAATGAGACGAGAGACA+TGG 0.640802 3_4:-62691152 Msa0512770:five_prime_UTR
CAGTATGGGTACAATTGACA+AGG 0.650569 3_4:+62687944 None:intergenic
TGAGGGAAGATATAAGACAA+TGG 0.680989 3_4:-62690758 Msa0512770:CDS
AAATATATAAGATTGCAAGA+GGG 0.689156 3_4:-62688670 Msa0512770:CDS
TCTCATGATTATGTTCCACA+AGG 0.699811 3_4:-62690574 Msa0512770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTATATTTCATGAAAA+TGG - chr3_4:62689302-62689321 Msa0512770:intron 10.0%
!!! TTTTTACATAATGATGATAT+AGG - chr3_4:62688878-62688897 Msa0512770:CDS 15.0%
!! TATTGTTGTGATATTATAAT+AGG + chr3_4:62689733-62689752 None:intergenic 15.0%
!! ATATGATTATTCATTCTATA+TGG - chr3_4:62689944-62689963 Msa0512770:intron 15.0%
!!! TATTCATTTATTTGTTAATG+TGG - chr3_4:62690024-62690043 Msa0512770:intron 15.0%
!!! ATTCATTTATTTGTTAATGT+GGG - chr3_4:62690025-62690044 Msa0512770:intron 15.0%
!! TTGTTCATCTTAATTATATT+AGG - chr3_4:62690540-62690559 Msa0512770:intron 15.0%
!!! ATTTTCTTTCATTGTTTTTG+TGG - chr3_4:62687472-62687491 Msa0512770:CDS 20.0%
!!! ATTGTTTTTGTGGTATTTTT+TGG - chr3_4:62687482-62687501 Msa0512770:CDS 20.0%
!!! TTGATAATTCAATGAGTAAT+GGG + chr3_4:62687561-62687580 None:intergenic 20.0%
!!! TTTGATAATTCAATGAGTAA+TGG + chr3_4:62687562-62687581 None:intergenic 20.0%
!! ATTACTCATTGAATTATCAA+AGG - chr3_4:62687561-62687580 Msa0512770:intron 20.0%
!! ATGTATAAGAAGACAATTAT+TGG + chr3_4:62687662-62687681 None:intergenic 20.0%
!!! TTTTTTTGAACAATCAAAAG+TGG - chr3_4:62688219-62688238 Msa0512770:intron 20.0%
!! AGTTACAACATTATTGAATA+TGG - chr3_4:62688470-62688489 Msa0512770:intron 20.0%
!! AGATTCAATTCATTTAACAT+AGG - chr3_4:62688529-62688548 Msa0512770:intron 20.0%
!! TTAAAAATAGTTTCTTAGCT+TGG - chr3_4:62688622-62688641 Msa0512770:CDS 20.0%
!!! TAAAATTTTTGTGTATGAAG+AGG - chr3_4:62688927-62688946 Msa0512770:CDS 20.0%
!!! AAAATTTTTGTGTATGAAGA+GGG - chr3_4:62688928-62688947 Msa0512770:CDS 20.0%
!! ATTGAATATATATTCTTGCA+AGG + chr3_4:62688979-62688998 None:intergenic 20.0%
!! TTGCAAGAATATATATTCAA+TGG - chr3_4:62688978-62688997 Msa0512770:CDS 20.0%
!! AAGAATATATATTCAATGGA+GGG - chr3_4:62688982-62689001 Msa0512770:CDS 20.0%
!! AAATATATAAGATTGCAAGA+GGG - chr3_4:62689859-62689878 Msa0512770:intron 20.0%
!! ATTAAGATGAACAATTAGTT+TGG + chr3_4:62690534-62690553 None:intergenic 20.0%
!!! GAATATTGATTAAACATGTA+AGG + chr3_4:62690821-62690840 None:intergenic 20.0%
!! ACATGTTTAATCAATATTCT+TGG - chr3_4:62690822-62690841 Msa0512770:intron 20.0%
!! TATTCTTGGAGATTTATAAA+TGG - chr3_4:62690836-62690855 Msa0512770:intron 20.0%
!! ATATGTAGCAATAAAATCAA+AGG + chr3_4:62690877-62690896 None:intergenic 20.0%
!! GTGTAGTTAATTAAATATGA+TGG - chr3_4:62691111-62691130 Msa0512770:exon 20.0%
! TGATAATTCAATGAGTAATG+GGG + chr3_4:62687560-62687579 None:intergenic 25.0%
! AACATTAATTACCATTAGCT+AGG + chr3_4:62687706-62687725 None:intergenic 25.0%
! TAAATTCAATTCTCCATTGT+AGG + chr3_4:62687797-62687816 None:intergenic 25.0%
! TACAATGGAGAATTGAATTT+AGG - chr3_4:62687796-62687815 Msa0512770:intron 25.0%
! AACATTATTGAATATGGAGT+TGG - chr3_4:62688476-62688495 Msa0512770:intron 25.0%
! TGAGAACACAAATGTTAAAT+GGG + chr3_4:62688654-62688673 None:intergenic 25.0%
! ATTGAAGCCTATTTAATATG+TGG - chr3_4:62688751-62688770 Msa0512770:CDS 25.0%
! ATCTCAACCACATATTAAAT+AGG + chr3_4:62688761-62688780 None:intergenic 25.0%
! GAGGTTAAAACTCTTAAATA+TGG + chr3_4:62688788-62688807 None:intergenic 25.0%
! CCTTCAAAAAAAAATGTAAG+AGG + chr3_4:62688807-62688826 None:intergenic 25.0%
!!! CCTCTTACATTTTTTTTTGA+AGG - chr3_4:62688804-62688823 Msa0512770:CDS 25.0%
! CAAGAATATATATTCAATGG+AGG - chr3_4:62688981-62689000 Msa0512770:CDS 25.0%
! GGGAATATTTATCAACTTAT+TGG - chr3_4:62689002-62689021 Msa0512770:CDS 25.0%
! TATCACACAAATATGCATAT+TGG - chr3_4:62689178-62689197 Msa0512770:CDS 25.0%
! CATACTCACACTATAATTAA+CGG + chr3_4:62689274-62689293 None:intergenic 25.0%
!!! ATGAAAATGGTTTTGTGTAT+AGG - chr3_4:62689315-62689334 Msa0512770:CDS 25.0%
!!! TGAAAATGGTTTTGTGTATA+GGG - chr3_4:62689316-62689335 Msa0512770:CDS 25.0%
!! TCATGGTATGAAATATTTTC+TGG + chr3_4:62689619-62689638 None:intergenic 25.0%
! AAATATTGTATTTGTCCAAG+TGG - chr3_4:62689655-62689674 Msa0512770:intron 25.0%
! AATATTGTATTTGTCCAAGT+GGG - chr3_4:62689656-62689675 Msa0512770:intron 25.0%
!! TTTTAGTGATGTTCTTGATT+GGG - chr3_4:62689762-62689781 Msa0512770:intron 25.0%
! AACAAAATTTCCTTAAGCTT+GGG + chr3_4:62689823-62689842 None:intergenic 25.0%
!! AAGCTTAAGGAAATTTTGTT+GGG - chr3_4:62689823-62689842 Msa0512770:intron 25.0%
! GAAATATATAAGATTGCAAG+AGG - chr3_4:62689858-62689877 Msa0512770:intron 25.0%
! TGAAATACATCATATCTCTT+AGG + chr3_4:62689925-62689944 None:intergenic 25.0%
! TTATTCATTCTATATGGCTT+AGG - chr3_4:62689950-62689969 Msa0512770:intron 25.0%
! ACAAATGTGAGAAAGATAAA+TGG - chr3_4:62690063-62690082 Msa0512770:intron 25.0%
!! TTCGTTAAGAGTTGATTATA+TGG + chr3_4:62690155-62690174 None:intergenic 25.0%
!!! CTCTTAATTTTGATTCATTC+TGG - chr3_4:62690296-62690315 Msa0512770:intron 25.0%
! CAATCCAAAAAATAATGATC+AGG - chr3_4:62690458-62690477 Msa0512770:intron 25.0%
!!! TGAACCTGATCATTATTTTT+TGG + chr3_4:62690465-62690484 None:intergenic 25.0%
! ATATTCATTCTCTTCTGTTA+AGG + chr3_4:62690490-62690509 None:intergenic 25.0%
! ATTGATTAAACATGTAAGGA+TGG + chr3_4:62690817-62690836 None:intergenic 25.0%
! TGTTTATGACTTTATGTAGA+TGG - chr3_4:62691134-62691153 Msa0512770:five_prime_UTR 25.0%
!! TTTGGTATCGATTCATTTGA+TGG - chr3_4:62687500-62687519 Msa0512770:intron 30.0%
!! ATTCATTTGATGGTGCAAAA+TGG - chr3_4:62687510-62687529 Msa0512770:intron 30.0%
!! TTCATTTGATGGTGCAAAAT+GGG - chr3_4:62687511-62687530 Msa0512770:intron 30.0%
ATACACCTTGTATGATGAAA+GGG + chr3_4:62687612-62687631 None:intergenic 30.0%
TATACACCTTGTATGATGAA+AGG + chr3_4:62687613-62687632 None:intergenic 30.0%
!!! GTTGTTGATTTTGTACATGT+AGG - chr3_4:62687744-62687763 Msa0512770:intron 30.0%
AATGCAAGGAGATAGAAATT+TGG - chr3_4:62687843-62687862 Msa0512770:CDS 30.0%
GAACTATATCATGAGAGATA+AGG - chr3_4:62688023-62688042 Msa0512770:intron 30.0%
! ACTTTGCTATGTTACTTAAG+TGG + chr3_4:62688088-62688107 None:intergenic 30.0%
AAATCCACCTAATTGATATC+AGG - chr3_4:62688139-62688158 Msa0512770:intron 30.0%
TAATACAACTTCGATATTGC+AGG + chr3_4:62688174-62688193 None:intergenic 30.0%
GTATTAGAGTTTACGTTCAA+AGG - chr3_4:62688188-62688207 Msa0512770:intron 30.0%
! TGTTCTTACGGTAATTCTTT+TGG + chr3_4:62688290-62688309 None:intergenic 30.0%
TGAAATATATGTCTTTAGCC+TGG + chr3_4:62688425-62688444 None:intergenic 30.0%
TTTCACTTTATCTAACAACC+TGG - chr3_4:62688440-62688459 Msa0512770:intron 30.0%
TTCACTTTATCTAACAACCT+GGG - chr3_4:62688441-62688460 Msa0512770:intron 30.0%
GTGAGAACACAAATGTTAAA+TGG + chr3_4:62688655-62688674 None:intergenic 30.0%
AAAGATAGCTCAAAAGATGA+AGG + chr3_4:62688722-62688741 None:intergenic 30.0%
! TCATCTTTTGAGCTATCTTT+TGG - chr3_4:62688722-62688741 Msa0512770:CDS 30.0%
! CATCTTTTGAGCTATCTTTT+GGG - chr3_4:62688723-62688742 Msa0512770:CDS 30.0%
ATATAGGAGTTACCACTTAA+TGG - chr3_4:62688894-62688913 Msa0512770:CDS 30.0%
TAAATAGCTTCTCCATTAAG+TGG + chr3_4:62688909-62688928 None:intergenic 30.0%
AGGATCATAACAACACTAAA+TGG + chr3_4:62689084-62689103 None:intergenic 30.0%
GCATATTGGAATAGAAGTTA+TGG - chr3_4:62689192-62689211 Msa0512770:CDS 30.0%
ACTTTGCAATGCAAATATCT+CGG - chr3_4:62689390-62689409 Msa0512770:CDS 30.0%
ATCATTTCCTGAAATCAACT+TGG - chr3_4:62689438-62689457 Msa0512770:CDS 30.0%
TATCTTTGTTCTTCCAATGT+TGG + chr3_4:62689570-62689589 None:intergenic 30.0%
TACTCATCTTCATTGTTTCA+TGG + chr3_4:62689636-62689655 None:intergenic 30.0%
TAAATTGCCTCAACAATTCT+TGG + chr3_4:62689697-62689716 None:intergenic 30.0%
CAATCAAGAACATCACTAAA+AGG + chr3_4:62689763-62689782 None:intergenic 30.0%
! CTTTTAGTGATGTTCTTGAT+TGG - chr3_4:62689761-62689780 Msa0512770:intron 30.0%
CAACAAAATTTCCTTAAGCT+TGG + chr3_4:62689824-62689843 None:intergenic 30.0%
! CAAGCTTAAGGAAATTTTGT+TGG - chr3_4:62689822-62689841 Msa0512770:intron 30.0%
AATACATCATATCTCTTAGG+AGG + chr3_4:62689922-62689941 None:intergenic 30.0%
CTTGAAAGGTAAGTAATACA+TGG + chr3_4:62690629-62690648 None:intergenic 30.0%
AGGTAGGTTTAAAAGTTAGA+TGG + chr3_4:62690968-62690987 None:intergenic 30.0%
GCAAAAGGAATACAGAATTA+GGG + chr3_4:62691018-62691037 None:intergenic 30.0%
TGCAAAAGGAATACAGAATT+AGG + chr3_4:62691019-62691038 None:intergenic 30.0%
! TAATTCTGTATTCCTTTTGC+AGG - chr3_4:62691018-62691037 Msa0512770:CDS 30.0%
!!! TTTTGAGTTCTGAGAGAATG+TGG - chr3_4:62687417-62687436 Msa0512770:exon 35.0%
ATCTACCCTTTCATCATACA+AGG - chr3_4:62687604-62687623 Msa0512770:intron 35.0%
!! GTTGATTTTGTACATGTAGG+AGG - chr3_4:62687747-62687766 Msa0512770:intron 35.0%
TGAGGGAAGATATAAGACAA+TGG - chr3_4:62687771-62687790 Msa0512770:intron 35.0%
TATAAGACAATGGCCTACAA+TGG - chr3_4:62687781-62687800 Msa0512770:intron 35.0%
! CCTTGCATTGATCTTCTTAT+AGG + chr3_4:62687832-62687851 None:intergenic 35.0%
CCTATAAGAAGATCAATGCA+AGG - chr3_4:62687829-62687848 Msa0512770:CDS 35.0%
AGGAGATAGAAATTTGGAGA+AGG - chr3_4:62687849-62687868 Msa0512770:CDS 35.0%
AGAAATTTGGAGAAGGTTGA+AGG - chr3_4:62687856-62687875 Msa0512770:CDS 35.0%
TCTCATGATTATGTTCCACA+AGG - chr3_4:62687955-62687974 Msa0512770:CDS 35.0%
!! GAAATGCCTTTGCTTTTCAT+AGG - chr3_4:62687989-62688008 Msa0512770:intron 35.0%
ATCCTACCTATGAAAAGCAA+AGG + chr3_4:62687998-62688017 None:intergenic 35.0%
TTCTCCTGATATCAATTAGG+TGG + chr3_4:62688146-62688165 None:intergenic 35.0%
CGATTCTCCTGATATCAATT+AGG + chr3_4:62688149-62688168 None:intergenic 35.0%
! TGACTGACTCTTTGTTCTTA+CGG + chr3_4:62688302-62688321 None:intergenic 35.0%
ATGTTGTAACTTCTATTCCC+AGG + chr3_4:62688461-62688480 None:intergenic 35.0%
TAAAGTTAGCTCACAAGATG+AGG + chr3_4:62688506-62688525 None:intergenic 35.0%
TCATGTATGACGTGAAACTT+GGG + chr3_4:62688593-62688612 None:intergenic 35.0%
TTCATGTATGACGTGAAACT+TGG + chr3_4:62688594-62688613 None:intergenic 35.0%
AATAGAGCATGACATGTAAG+AGG + chr3_4:62688839-62688858 None:intergenic 35.0%
AAGTAGACATGAGCTTCATT+TGG + chr3_4:62689057-62689076 None:intergenic 35.0%
! TATTCGTGACAAAGCTGTTT+TGG - chr3_4:62689125-62689144 Msa0512770:CDS 35.0%
!! ATTCGTGACAAAGCTGTTTT+GGG - chr3_4:62689126-62689145 Msa0512770:CDS 35.0%
! CATGACAAGAAAGCATGAAA+TGG + chr3_4:62689224-62689243 None:intergenic 35.0%
TCATGCTTTCTTGTCATGAT+TGG - chr3_4:62689226-62689245 Msa0512770:intron 35.0%
CATGCTTTCTTGTCATGATT+GGG - chr3_4:62689227-62689246 Msa0512770:intron 35.0%
GGAAATGATGCATCTTTCTT+TGG + chr3_4:62689427-62689446 None:intergenic 35.0%
AGAATTGTTCTGTTCCATGT+TGG + chr3_4:62689499-62689518 None:intergenic 35.0%
AACATGGAACAGAACAATTC+TGG - chr3_4:62689498-62689517 Msa0512770:CDS 35.0%
TTCCAATGTTGGAAAAGCAA+TGG + chr3_4:62689559-62689578 None:intergenic 35.0%
TAGTGAAATTCCCAAGCTTA+AGG - chr3_4:62689810-62689829 Msa0512770:intron 35.0%
! AATTTTGTTGGGTATCTCTG+AGG - chr3_4:62689834-62689853 Msa0512770:intron 35.0%
TTCATTCTATATGGCTTAGG+AGG - chr3_4:62689953-62689972 Msa0512770:intron 35.0%
CAACTCTTAACGAATTCTTC+CGG - chr3_4:62690161-62690180 Msa0512770:intron 35.0%
ATAGATAGATGCGTACACTT+AGG + chr3_4:62690234-62690253 None:intergenic 35.0%
AAATCTAGTCGTGCAAATGA+TGG + chr3_4:62690354-62690373 None:intergenic 35.0%
GAGAATAAGGTGATAAGCAT+CGG + chr3_4:62690406-62690425 None:intergenic 35.0%
!! CTCAGAGGTTTTTGAGAATA+AGG + chr3_4:62690419-62690438 None:intergenic 35.0%
GATTGTAAACAATCAACGCA+TGG + chr3_4:62690443-62690462 None:intergenic 35.0%
AGGTCATGAAACACAAAAGT+TGG + chr3_4:62690568-62690587 None:intergenic 35.0%
ATGACTAGTACCAACAGTAT+GGG + chr3_4:62690602-62690621 None:intergenic 35.0%
TATGACTAGTACCAACAGTA+TGG + chr3_4:62690603-62690622 None:intergenic 35.0%
!!! TTCTTCTGGTTTTGCTTGAA+AGG + chr3_4:62690643-62690662 None:intergenic 35.0%
AACTTTCCAGGCTAAAGTAT+GGG - chr3_4:62690681-62690700 Msa0512770:CDS 35.0%
TGGAGTGTGTTAGATTTCAA+TGG + chr3_4:62690777-62690796 None:intergenic 35.0%
TGGAAACATTATTACCATGG+TGG + chr3_4:62690797-62690816 None:intergenic 35.0%
GGATGGAAACATTATTACCA+TGG + chr3_4:62690800-62690819 None:intergenic 35.0%
TATACCACTGTGATTCACAA+AGG + chr3_4:62690988-62691007 None:intergenic 35.0%
GGAATACAGAATTAGGGTTA+GGG + chr3_4:62691012-62691031 None:intergenic 35.0%
AGGAATACAGAATTAGGGTT+AGG + chr3_4:62691013-62691032 None:intergenic 35.0%
AATCTACCTGCTTATGGATA+TGG - chr3_4:62691041-62691060 Msa0512770:CDS 35.0%
AAACAACCATATCCATAAGC+AGG + chr3_4:62691050-62691069 None:intergenic 35.0%
! GCTTATGGATATGGTTGTTT+TGG - chr3_4:62691050-62691069 Msa0512770:CDS 35.0%
TCTCTCGTCTCATTCTTTGA+CGG + chr3_4:62687375-62687394 None:intergenic 40.0%
AAAGAATGAGACGAGAGACA+TGG - chr3_4:62687377-62687396 Msa0512770:three_prime_UTR 40.0%
! ATTCAATGAGTAATGGGGTG+TGG + chr3_4:62687555-62687574 None:intergenic 40.0%
! TTTTGTGCACACCTAGCTAA+TGG - chr3_4:62687692-62687711 Msa0512770:intron 40.0%
TTTGTACATGTAGGAGGATG+AGG - chr3_4:62687753-62687772 Msa0512770:intron 40.0%
TTGTACATGTAGGAGGATGA+GGG - chr3_4:62687754-62687773 Msa0512770:intron 40.0%
TAATCATGAGAGTCCTCAAG+AGG + chr3_4:62687946-62687965 None:intergenic 40.0%
TTTCTGTAGATGTCTCCTTG+TGG + chr3_4:62687973-62687992 None:intergenic 40.0%
!! TGCCTTTGCTTTTCATAGGT+AGG - chr3_4:62687993-62688012 Msa0512770:intron 40.0%
!!! GCTAGATGAGTTGCTTTTTG+TGG + chr3_4:62688257-62688276 None:intergenic 40.0%
! AAAAAGGCTGCCTTTAGGTT+TGG + chr3_4:62688393-62688412 None:intergenic 40.0%
! AAACCTAAAGGCAGCCTTTT+TGG - chr3_4:62688392-62688411 Msa0512770:intron 40.0%
AGCTCAATCACTTGGTTATG+AGG + chr3_4:62688685-62688704 None:intergenic 40.0%
!! GAACCTCCTCTTTTTCACTA+TGG - chr3_4:62688952-62688971 Msa0512770:CDS 40.0%
CAAGGACCATAGTGAAAAAG+AGG + chr3_4:62688961-62688980 None:intergenic 40.0%
! CAGCTTTGTCACGAATAACT+GGG + chr3_4:62689122-62689141 None:intergenic 40.0%
! ACAGCTTTGTCACGAATAAC+TGG + chr3_4:62689123-62689142 None:intergenic 40.0%
!!! GCTGTTTTGGGAAGAACTAT+TGG - chr3_4:62689138-62689157 Msa0512770:CDS 40.0%
! GTTTTGTGTATAGGGACCAA+GGG - chr3_4:62689324-62689343 Msa0512770:CDS 40.0%
!! CCTGTTACCAAGTTGATTTC+AGG + chr3_4:62689448-62689467 None:intergenic 40.0%
! CCTGAAATCAACTTGGTAAC+AGG - chr3_4:62689445-62689464 Msa0512770:CDS 40.0%
! TTGGTAACAGGAGAAACAAC+AGG - chr3_4:62689457-62689476 Msa0512770:CDS 40.0%
GGAGAAACAACAGGTTTACT+TGG - chr3_4:62689466-62689485 Msa0512770:CDS 40.0%
GAAACAACAGGTTTACTTGG+TGG - chr3_4:62689469-62689488 Msa0512770:CDS 40.0%
!! ACAATTCTGGCTTTCTTTGC+AGG - chr3_4:62689511-62689530 Msa0512770:CDS 40.0%
TTCTTTGCAGGACAAATGCA+TGG - chr3_4:62689523-62689542 Msa0512770:CDS 40.0%
!! GACCATTGCTTTTCCAACAT+TGG - chr3_4:62689554-62689573 Msa0512770:CDS 40.0%
ATTGTATTTGTCCAAGTGGG+TGG - chr3_4:62689659-62689678 Msa0512770:intron 40.0%
TTGTATTTGTCCAAGTGGGT+GGG - chr3_4:62689660-62689679 Msa0512770:intron 40.0%
TCTTAACGAATTCTTCCGGA+AGG - chr3_4:62690165-62690184 Msa0512770:intron 40.0%
TTTGCACGACTAGATTTAGC+TGG - chr3_4:62690357-62690376 Msa0512770:intron 40.0%
!! TAAGCATCGGATGTGTGAAA+GGG + chr3_4:62690393-62690412 None:intergenic 40.0%
!! ATAAGCATCGGATGTGTGAA+AGG + chr3_4:62690394-62690413 None:intergenic 40.0%
CAGTATGGGTACAATTGACA+AGG + chr3_4:62690588-62690607 None:intergenic 40.0%
GTCAATTGTACCCATACTGT+TGG - chr3_4:62690589-62690608 Msa0512770:CDS 40.0%
GGAAAGTTGTTATAGCAGGA+AGG + chr3_4:62690669-62690688 None:intergenic 40.0%
TCCTGCTATAACAACTTTCC+AGG - chr3_4:62690669-62690688 Msa0512770:CDS 40.0%
CAACTTTCCAGGCTAAAGTA+TGG - chr3_4:62690680-62690699 Msa0512770:CDS 40.0%
AAATCTAACACACTCCACCA+TGG - chr3_4:62690780-62690799 Msa0512770:intron 40.0%
GAAACATGTGAAAGTAAGCC+TGG - chr3_4:62691076-62691095 Msa0512770:CDS 40.0%
!! GGTGTCATTGGTTCTCAACA+AGG + chr3_4:62687917-62687936 None:intergenic 45.0%
! AATGCTTGGGCATCGCTTAA+TGG + chr3_4:62688341-62688360 None:intergenic 45.0%
TCAAGCCCGTTTCAATGCTT+GGG + chr3_4:62688354-62688373 None:intergenic 45.0%
TTAGGTTTGGCACAGATAGG+TGG + chr3_4:62688380-62688399 None:intergenic 45.0%
! CCTTTAGGTTTGGCACAGAT+AGG + chr3_4:62688383-62688402 None:intergenic 45.0%
CCTATCTGTGCCAAACCTAA+AGG - chr3_4:62688380-62688399 Msa0512770:intron 45.0%
AAGCCAAAAAGGCTGCCTTT+AGG + chr3_4:62688398-62688417 None:intergenic 45.0%
!!! AGCCTTTTTGGCTTTCAACC+AGG - chr3_4:62688404-62688423 Msa0512770:intron 45.0%
AGCCTGGTTGAAAGCCAAAA+AGG + chr3_4:62688409-62688428 None:intergenic 45.0%
ACCAAGTGATTGAGCTCAAC+TGG - chr3_4:62688689-62688708 Msa0512770:CDS 45.0%
ACCAGTTGAGCTCAATCACT+TGG + chr3_4:62688693-62688712 None:intergenic 45.0%
GGACCATAGTGAAAAAGAGG+AGG + chr3_4:62688958-62688977 None:intergenic 45.0%
CTGGGTGAAAGAGATGTTCA+AGG + chr3_4:62689104-62689123 None:intergenic 45.0%
!! GGTTTTGTGTATAGGGACCA+AGG - chr3_4:62689323-62689342 Msa0512770:CDS 45.0%
TTCACATACCATGTTGCCCT+TGG + chr3_4:62689343-62689362 None:intergenic 45.0%
AAGGGCAACATGGTATGTGA+AGG - chr3_4:62689342-62689361 Msa0512770:CDS 45.0%
! TACTTGGTGGCTATCCAACA+TGG - chr3_4:62689482-62689501 Msa0512770:CDS 45.0%
GGCAAGTCCAAGAATTGTTG+AGG - chr3_4:62689687-62689706 Msa0512770:intron 45.0%
CGAATTCTTCCGGAAGGAAA+TGG - chr3_4:62690171-62690190 Msa0512770:intron 45.0%
TTGCAGCATCCATTTCCTTC+CGG + chr3_4:62690183-62690202 None:intergenic 45.0%
GAAGGAAATGGATGCTGCAA+TGG - chr3_4:62690183-62690202 Msa0512770:intron 45.0%
!! AGTCGTGCAAATGATGGACA+GGG + chr3_4:62690348-62690367 None:intergenic 45.0%
!! TAGTCGTGCAAATGATGGAC+AGG + chr3_4:62690349-62690368 None:intergenic 45.0%
TAGCAGGAAGGATCTTCTTC+TGG + chr3_4:62690657-62690676 None:intergenic 45.0%
GCCTGGAAAGTTGTTATAGC+AGG + chr3_4:62690673-62690692 None:intergenic 45.0%
TTCCAGGCTAAAGTATGGGA+CGG - chr3_4:62690685-62690704 Msa0512770:CDS 45.0%
ATGGCACACTCTCTTACATC+AGG + chr3_4:62690724-62690743 None:intergenic 45.0%
!! ACCTCAGGTGGTTGGTTTAA+TGG + chr3_4:62690743-62690762 None:intergenic 45.0%
CCACTGTGATTCACAAAGGT+AGG + chr3_4:62690984-62691003 None:intergenic 45.0%
CCTACCTTTGTGAATCACAG+TGG - chr3_4:62690981-62691000 Msa0512770:CDS 45.0%
AGCAGGTAGATTCCTGCAAA+AGG + chr3_4:62691033-62691052 None:intergenic 45.0%
TGCAGGAATCTACCTGCTTA+TGG - chr3_4:62691035-62691054 Msa0512770:CDS 45.0%
GGGTGTGGATGCATACATCT+TGG + chr3_4:62687540-62687559 None:intergenic 50.0%
!! AAGAGGCAGTACGGTGTCAT+TGG + chr3_4:62687929-62687948 None:intergenic 50.0%
AGAGTCCTCAAGAGGCAGTA+CGG + chr3_4:62687938-62687957 None:intergenic 50.0%
GCGCTAACTCAATCGTTAGG+TGG + chr3_4:62688066-62688085 None:intergenic 50.0%
GTGGCGCTAACTCAATCGTT+AGG + chr3_4:62688069-62688088 None:intergenic 50.0%
!! GCGATGCCCAAGCATTGAAA+CGG - chr3_4:62688345-62688364 Msa0512770:intron 50.0%
!! CGATGCCCAAGCATTGAAAC+GGG - chr3_4:62688346-62688365 Msa0512770:intron 50.0%
CTCAAGCCCGTTTCAATGCT+TGG + chr3_4:62688355-62688374 None:intergenic 50.0%
TATAGGGACCAAGGGCAACA+TGG - chr3_4:62689332-62689351 Msa0512770:CDS 50.0%
!! GTCGTGCAAATGATGGACAG+GGG + chr3_4:62690347-62690366 None:intergenic 50.0%
GCACGACTAGATTTAGCTGG+CGG - chr3_4:62690360-62690379 Msa0512770:intron 50.0%
CAATCAACGCATGGTCTCAG+AGG + chr3_4:62690434-62690453 None:intergenic 50.0%
GCTAAAGTATGGGACGGTCA+AGG - chr3_4:62690691-62690710 Msa0512770:CDS 50.0%
GCACACTCTCTTACATCAGG+TGG + chr3_4:62690721-62690740 None:intergenic 50.0%
GCCATTAAACCAACCACCTG+AGG - chr3_4:62690739-62690758 Msa0512770:CDS 50.0%
GTAAGCCTGGACAGACTTCT+AGG - chr3_4:62691089-62691108 Msa0512770:CDS 50.0%
CTACACCTAGAAGTCTGTCC+AGG + chr3_4:62691097-62691116 None:intergenic 50.0%
TGACACCGTACTGCCTCTTG+AGG - chr3_4:62687930-62687949 Msa0512770:CDS 55.0%
TTGTCCAAGTGGGTGGGAAG+TGG - chr3_4:62689666-62689685 Msa0512770:intron 55.0%
GGACAGGGGATAGCATCGTA+CGG + chr3_4:62690333-62690352 None:intergenic 55.0%
GACCGTCCCATACTTTAGCC+TGG + chr3_4:62690690-62690709 None:intergenic 55.0%
ACTCTCTGACCTCAGGTGGT+TGG + chr3_4:62690751-62690770 None:intergenic 55.0%
ATGGCACACTCTCTGACCTC+AGG + chr3_4:62690758-62690777 None:intergenic 55.0%
! CTTGCCACTTCCCACCCACT+TGG + chr3_4:62689673-62689692 None:intergenic 60.0%
GCACACTCTCTGACCTCAGG+TGG + chr3_4:62690755-62690774 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 62687363 62691188 62687363 ID=Msa0512770;Name=Msa0512770
chr3_4 mRNA 62687363 62691188 62687363 ID=Msa0512770-mRNA-1;Parent=Msa0512770;Name=Msa0512770-mRNA-1;_AED=0.21;_eAED=0.21;_QI=71|0.6|0.83|1|1|1|6|64|562
chr3_4 exon 62687363 62687511 62687363 ID=Msa0512770-mRNA-1:exon:15599;Parent=Msa0512770-mRNA-1
chr3_4 exon 62687817 62687989 62687817 ID=Msa0512770-mRNA-1:exon:15598;Parent=Msa0512770-mRNA-1
chr3_4 exon 62688570 62689214 62688570 ID=Msa0512770-mRNA-1:exon:15597;Parent=Msa0512770-mRNA-1
chr3_4 exon 62689303 62689651 62689303 ID=Msa0512770-mRNA-1:exon:15596;Parent=Msa0512770-mRNA-1
chr3_4 exon 62690541 62690785 62690541 ID=Msa0512770-mRNA-1:exon:15595;Parent=Msa0512770-mRNA-1
chr3_4 exon 62690926 62691188 62690926 ID=Msa0512770-mRNA-1:exon:15594;Parent=Msa0512770-mRNA-1
chr3_4 five_prime_UTR 62691118 62691188 62691118 ID=Msa0512770-mRNA-1:five_prime_utr;Parent=Msa0512770-mRNA-1
chr3_4 CDS 62690926 62691117 62690926 ID=Msa0512770-mRNA-1:cds;Parent=Msa0512770-mRNA-1
chr3_4 CDS 62690541 62690785 62690541 ID=Msa0512770-mRNA-1:cds;Parent=Msa0512770-mRNA-1
chr3_4 CDS 62689303 62689651 62689303 ID=Msa0512770-mRNA-1:cds;Parent=Msa0512770-mRNA-1
chr3_4 CDS 62688570 62689214 62688570 ID=Msa0512770-mRNA-1:cds;Parent=Msa0512770-mRNA-1
chr3_4 CDS 62687817 62687989 62687817 ID=Msa0512770-mRNA-1:cds;Parent=Msa0512770-mRNA-1
chr3_4 CDS 62687427 62687511 62687427 ID=Msa0512770-mRNA-1:cds;Parent=Msa0512770-mRNA-1
chr3_4 three_prime_UTR 62687363 62687426 62687363 ID=Msa0512770-mRNA-1:three_prime_utr;Parent=Msa0512770-mRNA-1
Gene Sequence

>Msa0512770

ATGTGGCACTTCAACAAAATACACTTAAGTCTAGTTACATTTTCTTTCATTGTTTTTGTGGTATTTTTTGGTATCGATTCATTTGATGGTGCAAAATGGGTATCCAAGATGTATGCATCCACACCCCATTACTCATTGAATTATCAAAGGAATCAAAAGAAACATTCAGAATCTACCCTTTCATCATACAAGGAGGATGAGGGAAGATATAAGACAATGGCCTACAATGGAGAATTGAATTTAGGTAACAAATTGCCTATAAGAAGATCAATGCAAGGAGATAGAAATTTGGAGAAGGTTGAAGGAAGTCTTGCAAAAGCAAGAGCATTGATAAAACAAGCCTTGTTGAGAACCAATGACACCGTACTGCCTCTTGAGGACTCTCATGATTATGTTCCACAAGGAGACATCTACAGAAATGCCTTTGCTTTTCATAGGAGTTACCACTTAATGGAGAAGCTATTTAAAATTTTTGTGTATGAAGAGGGAGAACCTCCTCTTTTTCACTATGGTCCTTGCAAGAATATATATTCAATGGAGGGAATATTTATCAACTTATTGGAAAGCAATACTTTGTTTCGAACTCAGAATCCAAATGAAGCTCATGTCTACTTTCTTCCATTTAGTGTTGTTATGATCCTTGAACATCTCTTTCACCCAGTTATTCGTGACAAAGCTGTTTTGGGAAGAACTATTGGTGATTATGTTCATATCATATCACACAAATATGCATATTGGAATAGAAGTTATGGAGCTGACCATTTCATGCTTTCTTGTCATGATTGGGGACCAAGGGCAACATGGTATGTGAAGGAATTGTATTTCATTGCAATTCGAGTACTTTGCAATGCAAATATCTCGGAGCATTTCAATCCAAAGAAAGATGCATCATTTCCTGAAATCAACTTGGTAACAGGAGAAACAACAGGTTTACTTGGTGGCTATCCAACATGGAACAGAACAATTCTGGCTTTCTTTGCAGGACAAATGCATGGTAGAATTAGACCATTGCTTTTCCAACATTGGAAGAACAAAGATAAAGATGTGTTAGTTTATGAAAAACTTCCAGAAAATATTTCATACCATGAAACAATGAAGATGAGTAAATATTGTATTTGTCCAAGTGGGTGGGAAGTGGCAAGTCCAAGAATTGTTGAGGCAATTTATGCTGAATGTGTACCTATTATAATATCACAACAATATGTACTTCCTTTTAGTGATGTTCTTGATTGGGATTCATTTTCTGTTCAAATTGAAGTTAGTGAAATTCCCAAGCTTAAGGAAATTTTGTTGGGTATCTCTGAGGAGAAATATATAAGATTGCAAGAGGGTGTTAAGCAAGTTCAAAGACATTTTGAAGTGAATAATCCTCCTAAGAGATATGATGTATTTCATATGATTATTCATTCTATATGGCTTAGGAGGTTGAATGCTCCAACTTTTGTGTTTCATGACCTTGTCAATTGTACCCATACTGTTGGTACTAGTCATAGTACCATGTATTACTTACCTTTCAAGCAAAACCAGAAGAAGATCCTTCCTGCTATAACAACTTTCCAGGCTAAAGTATGGGACGGTCAAGGTAAACCACCTGATGTAAGAGAGAATCTACCTGCTTATGGATATGGTTGTTTTGGAAAGAAACATGTGAAAGTAAGCCTGGACAGACTTCTAGGTGTAGTTAATTAA

Protein sequence

>Msa0512770

MWHFNKIHLSLVTFSFIVFVVFFGIDSFDGAKWVSKMYASTPHYSLNYQRNQKKHSESTLSSYKEDEGRYKTMAYNGELNLGNKLPIRRSMQGDRNLEKVEGSLAKARALIKQALLRTNDTVLPLEDSHDYVPQGDIYRNAFAFHRSYHLMEKLFKIFVYEEGEPPLFHYGPCKNIYSMEGIFINLLESNTLFRTQNPNEAHVYFLPFSVVMILEHLFHPVIRDKAVLGRTIGDYVHIISHKYAYWNRSYGADHFMLSCHDWGPRATWYVKELYFIAIRVLCNANISEHFNPKKDASFPEINLVTGETTGLLGGYPTWNRTILAFFAGQMHGRIRPLLFQHWKNKDKDVLVYEKLPENISYHETMKMSKYCICPSGWEVASPRIVEAIYAECVPIIISQQYVLPFSDVLDWDSFSVQIEVSEIPKLKEILLGISEEKYIRLQEGVKQVQRHFEVNNPPKRYDVFHMIIHSIWLRRLNAPTFVFHDLVNCTHTVGTSHSTMYYLPFKQNQKKILPAITTFQAKVWDGQGKPPDVRENLPAYGYGCFGKKHVKVSLDRLLGVVN*