Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659100 | O82515.1 | 84.958 | 359 | 0 | 2 | 1 | 305 | 1 | 359 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659100 | sp|O82515|MTDH_MEDSA | 84.958 | 359 | 0 | 2 | 1 | 305 | 1 | 359 | 0.0 | 575 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014970 | Msa0659100 | 0.807584 | 4.705490e-50 | -8.615850e-47 |
| Msa0034590 | Msa0659100 | 0.807598 | 4.673441e-50 | -8.615850e-47 |
| Msa0046680 | Msa0659100 | -0.808981 | 2.371253e-50 | -8.615850e-47 |
| Msa0047630 | Msa0659100 | 0.802841 | 4.632568e-49 | -8.615850e-47 |
| Msa0049670 | Msa0659100 | 0.808379 | 3.188666e-50 | -8.615850e-47 |
| Msa0054110 | Msa0659100 | 0.835919 | 1.267456e-56 | -8.615850e-47 |
| Msa0057270 | Msa0659100 | 0.818054 | 2.393952e-52 | -8.615850e-47 |
| Msa0108500 | Msa0659100 | 0.801170 | 1.021669e-48 | -8.615850e-47 |
| Msa0619030 | Msa0659100 | 0.849864 | 2.459182e-60 | -8.615850e-47 |
| Msa0619480 | Msa0659100 | 0.836995 | 6.749405e-57 | -8.615850e-47 |
| Msa0625550 | Msa0659100 | 0.808517 | 2.978847e-50 | -8.615850e-47 |
| Msa0629030 | Msa0659100 | -0.802073 | 6.670740e-49 | -8.615850e-47 |
| Msa0629040 | Msa0659100 | -0.805819 | 1.110407e-49 | -8.615850e-47 |
| Msa0639410 | Msa0659100 | -0.801214 | 1.000592e-48 | -8.615850e-47 |
| Msa0640780 | Msa0659100 | 0.808383 | 3.182461e-50 | -8.615850e-47 |
| Msa0648840 | Msa0659100 | 0.810547 | 1.091784e-50 | -8.615850e-47 |
| Msa0651340 | Msa0659100 | 0.801821 | 7.515313e-49 | -8.615850e-47 |
| Msa0654400 | Msa0659100 | 0.809358 | 1.968311e-50 | -8.615850e-47 |
| Msa0654500 | Msa0659100 | 0.803017 | 4.260251e-49 | -8.615850e-47 |
| Msa0658920 | Msa0659100 | 0.822561 | 2.217420e-53 | -8.615850e-47 |
| Msa0659100 | Msa0659640 | 0.832913 | 7.206433e-56 | -8.615850e-47 |
| Msa0659100 | Msa0666580 | -0.806135 | 9.529580e-50 | -8.615850e-47 |
| Msa0659100 | Msa0691350 | 0.802336 | 5.887190e-49 | -8.615850e-47 |
| Msa0659100 | Msa0693560 | 0.828971 | 6.682503e-55 | -8.615850e-47 |
| Msa0659100 | Msa0704350 | 0.812434 | 4.247807e-51 | -8.615850e-47 |
| Msa0659100 | Msa0704430 | 0.822797 | 1.954954e-53 | -8.615850e-47 |
| Msa0659100 | Msa0705550 | 0.827014 | 1.976991e-54 | -8.615850e-47 |
| Msa0659100 | Msa0706700 | 0.810150 | 1.329629e-50 | -8.615850e-47 |
| Msa0659100 | Msa0707870 | 0.850909 | 1.251898e-60 | -8.615850e-47 |
| Msa0659100 | Msa0708840 | 0.807548 | 4.791286e-50 | -8.615850e-47 |
| Msa0659100 | Msa0714060 | 0.811890 | 5.582730e-51 | -8.615850e-47 |
| Msa0659100 | Msa0714200 | 0.813259 | 2.801706e-51 | -8.615850e-47 |
| Msa0659100 | Msa0728520 | -0.820676 | 6.048264e-53 | -8.615850e-47 |
| Msa0659100 | Msa0729780 | 0.854789 | 9.742079e-62 | -8.615850e-47 |
| Msa0659100 | Msa0736330 | 0.838747 | 2.393484e-57 | -8.615850e-47 |
| Msa0659100 | Msa0736560 | -0.802126 | 6.505530e-49 | -8.615850e-47 |
| Msa0659100 | Msa0743370 | -0.820343 | 7.213277e-53 | -8.615850e-47 |
| Msa0659100 | Msa0744550 | -0.800339 | 1.510011e-48 | -8.615850e-47 |
| Msa0659100 | Msa0747660 | 0.827809 | 1.274129e-54 | -8.615850e-47 |
| Msa0659100 | Msa0750490 | 0.803151 | 3.996614e-49 | -8.615850e-47 |
| Msa0659100 | Msa0750830 | -0.801223 | 9.965060e-49 | -8.615850e-47 |
| Msa0659100 | Msa0770020 | 0.816968 | 4.205790e-52 | -8.615850e-47 |
| Msa0659100 | Msa0776540 | -0.822869 | 1.880293e-53 | -8.615850e-47 |
| Msa0659100 | Msa0786600 | 0.809057 | 2.283337e-50 | -8.615850e-47 |
| Msa0659100 | Msa0812050 | -0.800397 | 1.468921e-48 | -8.615850e-47 |
| Msa0659100 | Msa0814660 | -0.820483 | 6.697510e-53 | -8.615850e-47 |
| Msa0659100 | Msa0822680 | 0.810960 | 8.889013e-51 | -8.615850e-47 |
| Msa0659100 | Msa0829770 | 0.806681 | 7.308552e-50 | -8.615850e-47 |
| Msa0659100 | Msa0848980 | 0.833089 | 6.515046e-56 | -8.615850e-47 |
| Msa0659100 | Msa0855260 | -0.823980 | 1.034150e-53 | -8.615850e-47 |
| Msa0659100 | Msa0856080 | -0.817379 | 3.400881e-52 | -8.615850e-47 |
| Msa0659100 | Msa0865830 | -0.812636 | 3.837893e-51 | -8.615850e-47 |
| Msa0659100 | Msa0872800 | 0.805222 | 1.481797e-49 | -8.615850e-47 |
| Msa0659100 | Msa0873070 | 0.801924 | 7.157844e-49 | -8.615850e-47 |
| Msa0659100 | Msa0874750 | -0.803026 | 4.242826e-49 | -8.615850e-47 |
| Msa0659100 | Msa0896920 | -0.823942 | 1.055347e-53 | -8.615850e-47 |
| Msa0659100 | Msa0899080 | 0.818449 | 1.949029e-52 | -8.615850e-47 |
| Msa0659100 | Msa0927890 | 0.805588 | 1.241571e-49 | -8.615850e-47 |
| Msa0659100 | Msa0956600 | 0.800280 | 1.551765e-48 | -8.615850e-47 |
| Msa0659100 | Msa0961200 | 0.828774 | 7.457023e-55 | -8.615850e-47 |
| Msa0659100 | Msa0967250 | 0.827859 | 1.239508e-54 | -8.615850e-47 |
| Msa0659100 | Msa0967260 | 0.814258 | 1.688274e-51 | -8.615850e-47 |
| Msa0659100 | Msa0976400 | -0.818903 | 1.537219e-52 | -8.615850e-47 |
| Msa0659100 | Msa0995660 | 0.802233 | 6.181890e-49 | -8.615850e-47 |
| Msa0659100 | Msa0998940 | 0.830773 | 2.431977e-55 | -8.615850e-47 |
| Msa0659100 | Msa1007980 | 0.803642 | 3.162680e-49 | -8.615850e-47 |
| Msa0659100 | Msa1011140 | 0.809671 | 1.686343e-50 | -8.615850e-47 |
| Msa0659100 | Msa1016450 | 0.806058 | 9.888232e-50 | -8.615850e-47 |
| Msa0659100 | Msa1020500 | 0.804715 | 1.890831e-49 | -8.615850e-47 |
| Msa0659100 | Msa1029190 | 0.818392 | 2.008089e-52 | -8.615850e-47 |
| Msa0659100 | Msa1029200 | 0.817695 | 2.885373e-52 | -8.615850e-47 |
| Msa0659100 | Msa1035050 | -0.802648 | 5.078104e-49 | -8.615850e-47 |
| Msa0659100 | Msa1038570 | 0.828981 | 6.642930e-55 | -8.615850e-47 |
| Msa0659100 | Msa1038580 | 0.811190 | 7.925130e-51 | -8.615850e-47 |
| Msa0659100 | Msa1038610 | 0.826709 | 2.337840e-54 | -8.615850e-47 |
| Msa0659100 | Msa1051410 | 0.802446 | 5.587850e-49 | -8.615850e-47 |
| Msa0659100 | Msa1065090 | 0.811091 | 8.327674e-51 | -8.615850e-47 |
| Msa0659100 | Msa1065620 | 0.814224 | 1.718005e-51 | -8.615850e-47 |
| Msa0659100 | Msa1072770 | 0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0659100 | Msa1075090 | -0.807976 | 3.884737e-50 | -8.615850e-47 |
| Msa0659100 | Msa1083660 | 0.811429 | 7.032258e-51 | -8.615850e-47 |
| Msa0659100 | Msa1098070 | 0.811045 | 8.519189e-51 | -8.615850e-47 |
| Msa0659100 | Msa1102410 | 0.815196 | 1.046570e-51 | -8.615850e-47 |
| Msa0659100 | Msa1104020 | 0.816240 | 6.122827e-52 | -8.615850e-47 |
| Msa0659100 | Msa1119370 | 0.804540 | 2.057088e-49 | -8.615850e-47 |
| Msa0659100 | Msa1129130 | 0.822927 | 1.822680e-53 | -8.615850e-47 |
| Msa0659100 | Msa1129160 | 0.836252 | 1.043461e-56 | -8.615850e-47 |
| Msa0659100 | Msa1129470 | 0.836271 | 1.031946e-56 | -8.615850e-47 |
| Msa0659100 | Msa1137240 | 0.835404 | 1.711646e-56 | -8.615850e-47 |
| Msa0659100 | Msa1147600 | 0.834322 | 3.204809e-56 | -8.615850e-47 |
| Msa0659100 | Msa1152500 | 0.800424 | 1.450845e-48 | -8.615850e-47 |
| Msa0659100 | Msa1154750 | 0.812944 | 3.286071e-51 | -8.615850e-47 |
| Msa0659100 | Msa1154770 | 0.831862 | 1.311893e-55 | -8.615850e-47 |
| Msa0659100 | Msa1172070 | 0.817240 | 3.653560e-52 | -8.615850e-47 |
| Msa0659100 | Msa1172120 | 0.807707 | 4.431029e-50 | -8.615850e-47 |
| Msa0659100 | Msa1182950 | 0.808825 | 2.559891e-50 | -8.615850e-47 |
| Msa0659100 | Msa1198280 | 0.824634 | 7.256104e-54 | -8.615850e-47 |
| Msa0659100 | Msa1198420 | 0.812627 | 3.854853e-51 | -8.615850e-47 |
| Msa0659100 | Msa1208830 | -0.805604 | 1.232190e-49 | -8.615850e-47 |
| Msa0659100 | Msa1211120 | 0.812563 | 3.981862e-51 | -8.615850e-47 |
| Msa0659100 | Msa1211880 | 0.814850 | 1.248428e-51 | -8.615850e-47 |
| Msa0659100 | Msa1216700 | 0.811377 | 7.217090e-51 | -8.615850e-47 |
| Msa0659100 | Msa1219530 | 0.803381 | 3.581847e-49 | -8.615850e-47 |
| Msa0659100 | Msa1220390 | 0.801020 | 1.096518e-48 | -8.615850e-47 |
| Msa0659100 | Msa1221520 | -0.803951 | 2.727739e-49 | -8.615850e-47 |
| Msa0659100 | Msa1223560 | -0.805488 | 1.302871e-49 | -8.615850e-47 |
| Msa0659100 | Msa1245300 | 0.812289 | 4.568736e-51 | -8.615850e-47 |
| Msa0659100 | Msa1252040 | 0.808796 | 2.596791e-50 | -8.615850e-47 |
| Msa0659100 | Msa1262740 | 0.820311 | 7.335163e-53 | -8.615850e-47 |
| Msa0659100 | Msa1264230 | 0.819006 | 1.456385e-52 | -8.615850e-47 |
| Msa0659100 | Msa1264940 | -0.804682 | 1.921492e-49 | -8.615850e-47 |
| Msa0659100 | Msa1265900 | 0.800281 | 1.550969e-48 | -8.615850e-47 |
| Msa0659100 | Msa1292700 | 0.812647 | 3.815562e-51 | -8.615850e-47 |
| Msa0659100 | Msa1298540 | 0.820598 | 6.303117e-53 | -8.615850e-47 |
| Msa0659100 | Msa1301410 | 0.801561 | 8.495300e-49 | -8.615850e-47 |
| Msa0659100 | Msa1303150 | -0.813168 | 2.933906e-51 | -8.615850e-47 |
| Msa0659100 | Msa1329660 | 0.824275 | 8.815982e-54 | -8.615850e-47 |
| Msa0659100 | Msa1332340 | 0.808547 | 2.935455e-50 | -8.615850e-47 |
| Msa0659100 | Msa1334000 | -0.806820 | 6.830435e-50 | -8.615850e-47 |
| Msa0659100 | Msa1343540 | 0.856722 | 2.655266e-62 | -8.615850e-47 |
| Msa0659100 | Msa1344870 | 0.807559 | 4.765600e-50 | -8.615850e-47 |
| Msa0659100 | Msa1349410 | 0.824255 | 8.913475e-54 | -8.615850e-47 |
| Msa0659100 | Msa1351560 | 0.804558 | 2.039417e-49 | -8.615850e-47 |
| Msa0659100 | Msa1371260 | 0.817326 | 3.495501e-52 | -8.615850e-47 |
| Msa0659100 | Msa1374210 | 0.813486 | 2.498432e-51 | -8.615850e-47 |
| Msa0659100 | Msa1376520 | -0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0659100 | Msa1381300 | 0.808745 | 2.662897e-50 | -8.615850e-47 |
| Msa0659100 | Msa1387610 | -0.801299 | 9.615529e-49 | -8.615850e-47 |
| Msa0659100 | Msa1388270 | 0.807937 | 3.960722e-50 | -8.615850e-47 |
| Msa0659100 | Msa1395360 | 0.834328 | 3.193138e-56 | -8.615850e-47 |
| Msa0659100 | Msa1405190 | 0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0659100 | Msa1409360 | 0.803365 | 3.609931e-49 | -8.615850e-47 |
| Msa0659100 | Msa1421490 | 0.805897 | 1.069342e-49 | -8.615850e-47 |
| Msa0659100 | Msa1429190 | -0.815418 | 9.340855e-52 | -8.615850e-47 |
| Msa0659100 | Msa1432730 | 0.801921 | 7.166033e-49 | -8.615850e-47 |
| Msa0659100 | Msa1438410 | 0.809441 | 1.889824e-50 | -8.615850e-47 |
| Msa0659100 | Msa1449470 | -0.804030 | 2.627063e-49 | -8.615850e-47 |
| Msa0129820 | Msa0659100 | 0.800274 | 1.556168e-48 | -8.615850e-47 |
| Msa0138380 | Msa0659100 | 0.820315 | 7.318767e-53 | -8.615850e-47 |
| Msa0150910 | Msa0659100 | -0.801150 | 1.031268e-48 | -8.615850e-47 |
| Msa0183960 | Msa0659100 | 0.800482 | 1.411850e-48 | -8.615850e-47 |
| Msa0190470 | Msa0659100 | 0.815898 | 7.301102e-52 | -8.615850e-47 |
| Msa0198140 | Msa0659100 | 0.814247 | 1.698244e-51 | -8.615850e-47 |
| Msa0198220 | Msa0659100 | 0.816568 | 5.170715e-52 | -8.615850e-47 |
| Msa0201910 | Msa0659100 | 0.800884 | 1.168949e-48 | -8.615850e-47 |
| Msa0228360 | Msa0659100 | 0.811748 | 5.995522e-51 | -8.615850e-47 |
| Msa0229420 | Msa0659100 | 0.811335 | 7.369047e-51 | -8.615850e-47 |
| Msa0232660 | Msa0659100 | 0.803752 | 3.000732e-49 | -8.615850e-47 |
| Msa0373110 | Msa0659100 | 0.812526 | 4.055753e-51 | -8.615850e-47 |
| Msa0373420 | Msa0659100 | 0.805016 | 1.636156e-49 | -8.615850e-47 |
| Msa0375930 | Msa0659100 | 0.844940 | 5.536360e-59 | -8.615850e-47 |
| Msa0377690 | Msa0659100 | 0.809797 | 1.584476e-50 | -8.615850e-47 |
| Msa0403720 | Msa0659100 | 0.805706 | 1.173034e-49 | -8.615850e-47 |
| Msa0413590 | Msa0659100 | 0.812608 | 3.891983e-51 | -8.615850e-47 |
| Msa0421480 | Msa0659100 | 0.800118 | 1.674473e-48 | -8.615850e-47 |
| Msa0424570 | Msa0659100 | 0.844523 | 7.172855e-59 | -8.615850e-47 |
| Msa0426680 | Msa0659100 | 0.815217 | 1.035177e-51 | -8.615850e-47 |
| Msa0429100 | Msa0659100 | 0.801220 | 9.977997e-49 | -8.615850e-47 |
| Msa0451370 | Msa0659100 | 0.801277 | 9.716285e-49 | -8.615850e-47 |
| Msa0466850 | Msa0659100 | -0.809345 | 1.981460e-50 | -8.615850e-47 |
| Msa0481580 | Msa0659100 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
| Msa0240460 | Msa0659100 | 0.820552 | 6.457975e-53 | -8.615850e-47 |
| Msa0244370 | Msa0659100 | 0.806220 | 9.145572e-50 | -8.615850e-47 |
| Msa0271700 | Msa0659100 | -0.803524 | 3.345123e-49 | -8.615850e-47 |
| Msa0271720 | Msa0659100 | -0.807970 | 3.895643e-50 | -8.615850e-47 |
| Msa0278340 | Msa0659100 | 0.814506 | 1.487821e-51 | -8.615850e-47 |
| Msa0282880 | Msa0659100 | 0.820453 | 6.805969e-53 | -8.615850e-47 |
| Msa0288280 | Msa0659100 | 0.805512 | 1.287731e-49 | -8.615850e-47 |
| Msa0320130 | Msa0659100 | -0.803054 | 4.186386e-49 | -8.615850e-47 |
| Msa0321180 | Msa0659100 | 0.811399 | 7.138454e-51 | -8.615850e-47 |
| Msa0321200 | Msa0659100 | 0.815050 | 1.127525e-51 | -8.615850e-47 |
| Msa0505610 | Msa0659100 | 0.801176 | 1.018755e-48 | -8.615850e-47 |
| Msa0513670 | Msa0659100 | -0.807025 | 6.183537e-50 | -8.615850e-47 |
| Msa0516000 | Msa0659100 | 0.843033 | 1.796632e-58 | -8.615850e-47 |
| Msa0524730 | Msa0659100 | 0.814500 | 1.493019e-51 | -8.615850e-47 |
| Msa0535570 | Msa0659100 | -0.814275 | 1.673695e-51 | -8.615850e-47 |
| Msa0546760 | Msa0659100 | -0.802005 | 6.888079e-49 | -8.615850e-47 |
| Msa0559440 | Msa0659100 | 0.807957 | 3.921816e-50 | -8.615850e-47 |
| Msa0567630 | Msa0659100 | -0.806939 | 6.446878e-50 | -8.615850e-47 |
| Msa0568780 | Msa0659100 | 0.935826 | 4.599939e-97 | -8.615850e-47 |
| Msa0569630 | Msa0659100 | 0.813886 | 2.039700e-51 | -8.615850e-47 |
| Msa0574230 | Msa0659100 | 0.835709 | 1.433028e-56 | -8.615850e-47 |
| Msa0576510 | Msa0659100 | 0.848338 | 6.531616e-60 | -8.615850e-47 |
| Msa0577960 | Msa0659100 | 0.806968 | 6.356639e-50 | -8.615850e-47 |
| Msa0578890 | Msa0659100 | 0.809255 | 2.070912e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659100 | MtrunA17_Chr8g0383721 | 83.008 | 359 | 7 | 2 | 1 | 305 | 1 | 359 | 0.0 | 560 |
| Msa0659100 | MtrunA17_Chr5g0411821 | 55.462 | 357 | 104 | 3 | 1 | 302 | 1 | 357 | 5.84e-141 | 403 |
| Msa0659100 | MtrunA17_Chr4g0064291 | 54.622 | 357 | 107 | 3 | 1 | 302 | 1 | 357 | 3.63e-138 | 395 |
| Msa0659100 | MtrunA17_Chr5g0411841 | 54.062 | 357 | 109 | 3 | 1 | 302 | 1 | 357 | 1.67e-137 | 393 |
| Msa0659100 | MtrunA17_Chr5g0411801 | 55.710 | 359 | 104 | 3 | 1 | 304 | 33 | 391 | 1.30e-136 | 392 |
| Msa0659100 | MtrunA17_Chr5g0411811 | 54.062 | 357 | 109 | 3 | 1 | 302 | 1 | 357 | 8.21e-135 | 386 |
| Msa0659100 | MtrunA17_Chr5g0411931 | 53.203 | 359 | 113 | 3 | 1 | 304 | 1 | 359 | 7.88e-134 | 384 |
| Msa0659100 | MtrunA17_Chr5g0411901 | 52.286 | 350 | 112 | 3 | 8 | 302 | 9 | 358 | 7.32e-133 | 381 |
| Msa0659100 | MtrunA17_Chr5g0411911 | 52.436 | 349 | 111 | 3 | 9 | 302 | 11 | 359 | 2.58e-130 | 375 |
| Msa0659100 | MtrunA17_Chr8g0367151 | 54.596 | 359 | 108 | 3 | 1 | 304 | 1 | 359 | 6.51e-130 | 374 |
| Msa0659100 | MtrunA17_Chr5g0411881 | 52.000 | 350 | 113 | 3 | 8 | 302 | 9 | 358 | 2.12e-129 | 372 |
| Msa0659100 | MtrunA17_Chr5g0411871 | 48.857 | 350 | 124 | 3 | 8 | 302 | 23 | 372 | 1.73e-125 | 363 |
| Msa0659100 | MtrunA17_Chr5g0411941 | 49.718 | 354 | 121 | 5 | 4 | 302 | 6 | 357 | 9.98e-113 | 330 |
| Msa0659100 | MtrunA17_Chr1g0157021 | 50.729 | 343 | 113 | 3 | 15 | 301 | 14 | 356 | 1.37e-112 | 330 |
| Msa0659100 | MtrunA17_Chr5g0411791 | 52.599 | 327 | 100 | 3 | 33 | 304 | 7 | 333 | 5.47e-110 | 322 |
| Msa0659100 | MtrunA17_Chr1g0208031 | 42.398 | 342 | 142 | 4 | 15 | 301 | 13 | 354 | 3.73e-92 | 278 |
| Msa0659100 | MtrunA17_Chr2g0279791 | 44.638 | 345 | 134 | 5 | 14 | 302 | 62 | 405 | 2.18e-91 | 277 |
| Msa0659100 | MtrunA17_Chr5g0411851 | 67.606 | 71 | 23 | 0 | 1 | 71 | 1 | 71 | 1.10e-30 | 112 |
| Msa0659100 | MtrunA17_Chr2g0279801 | 36.792 | 212 | 69 | 4 | 145 | 302 | 13 | 213 | 1.14e-28 | 109 |
| Msa0659100 | MtrunA17_Chr5g0411861 | 61.905 | 63 | 24 | 0 | 242 | 304 | 1 | 63 | 3.23e-24 | 93.2 |
| Msa0659100 | MtrunA17_Chr8g0385221 | 30.729 | 192 | 104 | 9 | 24 | 192 | 67 | 252 | 1.92e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0659100 | AT4G39330.1 | 64.804 | 358 | 71 | 3 | 1 | 303 | 1 | 358 | 6.53e-168 | 470 |
| Msa0659100 | AT2G21730.1 | 60.920 | 348 | 79 | 4 | 12 | 302 | 6 | 353 | 3.62e-152 | 431 |
| Msa0659100 | AT2G21890.1 | 61.095 | 347 | 79 | 4 | 12 | 302 | 6 | 352 | 6.24e-152 | 431 |
| Msa0659100 | AT4G37970.1 | 51.966 | 356 | 116 | 3 | 4 | 304 | 5 | 360 | 7.00e-131 | 377 |
| Msa0659100 | AT4G37990.1 | 56.160 | 349 | 98 | 3 | 9 | 302 | 5 | 353 | 1.12e-128 | 371 |
| Msa0659100 | AT4G39330.2 | 60.797 | 301 | 63 | 3 | 1 | 246 | 1 | 301 | 4.06e-128 | 368 |
| Msa0659100 | AT4G37980.1 | 54.441 | 349 | 104 | 3 | 9 | 302 | 5 | 353 | 4.48e-124 | 359 |
| Msa0659100 | AT4G37970.4 | 50.172 | 291 | 90 | 3 | 4 | 239 | 5 | 295 | 2.95e-97 | 289 |
| Msa0659100 | AT1G72680.1 | 42.690 | 342 | 140 | 4 | 16 | 302 | 14 | 354 | 5.00e-91 | 275 |
| Msa0659100 | AT3G19450.1 | 42.899 | 345 | 142 | 3 | 12 | 301 | 10 | 354 | 1.07e-89 | 272 |
| Msa0659100 | AT4G37980.2 | 50.000 | 290 | 90 | 3 | 9 | 243 | 5 | 294 | 5.05e-88 | 265 |
| Msa0659100 | AT4G34230.1 | 43.840 | 349 | 141 | 3 | 8 | 301 | 5 | 353 | 3.25e-87 | 265 |
| Msa0659100 | AT4G34230.2 | 43.553 | 349 | 142 | 3 | 8 | 301 | 5 | 353 | 2.52e-86 | 263 |
| Msa0659100 | AT4G37970.3 | 60.656 | 183 | 71 | 1 | 4 | 185 | 5 | 187 | 2.22e-81 | 247 |
| Msa0659100 | AT4G37970.2 | 60.656 | 183 | 71 | 1 | 4 | 185 | 5 | 187 | 3.18e-81 | 246 |
| Msa0659100 | AT5G63620.3 | 30.481 | 187 | 102 | 8 | 24 | 187 | 69 | 250 | 1.34e-16 | 79.3 |
| Msa0659100 | AT5G63620.1 | 30.645 | 186 | 101 | 8 | 24 | 186 | 69 | 249 | 1.94e-16 | 79.7 |
| Msa0659100 | AT5G63620.2 | 30.645 | 186 | 101 | 8 | 24 | 186 | 69 | 249 | 1.97e-16 | 79.7 |
Find 95 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACTTACCCTGTTGTTCC+TGG | 0.250937 | 4_3:-69393318 | Msa0659100:CDS |
| ACCTATAACTCTCCTTATAA+AGG | 0.251163 | 4_3:-69391656 | Msa0659100:CDS |
| TTGAGTGGGAGTTCGGTTTC+GGG | 0.283001 | 4_3:+69393596 | None:intergenic |
| TTTGAGTGGGAGTTCGGTTT+CGG | 0.285055 | 4_3:+69393595 | None:intergenic |
| TCTGTCTTTCCATTAGTTGC+AGG | 0.301516 | 4_3:-69390524 | Msa0659100:intron |
| CTAAAAGCGTGTTTGGTCTT+AGG | 0.313817 | 4_3:-69389893 | Msa0659100:three_prime_UTR |
| TGAGAATTGCAATCAAGATT+TGG | 0.319987 | 4_3:-69391705 | Msa0659100:CDS |
| GAACTCCCACTCAAAGCTTT+TGG | 0.323434 | 4_3:-69393587 | Msa0659100:CDS |
| TAGGTTCGTGTCCCTTTATA+AGG | 0.354122 | 4_3:+69391644 | None:intergenic |
| ATTGTCGTCTAATTTATTGT+AGG | 0.359090 | 4_3:-69389962 | Msa0659100:three_prime_UTR |
| TTATAGGTAAATACAGGTTT+AGG | 0.360036 | 4_3:+69391671 | None:intergenic |
| CCCTTTATAAGGAGAGTTAT+AGG | 0.360288 | 4_3:+69391655 | None:intergenic |
| GTAGACCAAGCAGTGGCATC+AGG | 0.373980 | 4_3:+69390603 | None:intergenic |
| GATGGTTTACCTGCAACTAA+TGG | 0.378875 | 4_3:+69390515 | None:intergenic |
| TATAGCCCGATGAAGTATTA+TGG | 0.379807 | 4_3:-69391512 | Msa0659100:CDS |
| GCCACTCCCAAATGTTTGCC+TGG | 0.380570 | 4_3:+69391479 | None:intergenic |
| CCTATAACTCTCCTTATAAA+GGG | 0.390671 | 4_3:-69391655 | Msa0659100:CDS |
| ACAAAGCTGATGTGAAATAT+CGG | 0.393376 | 4_3:-69390137 | Msa0659100:CDS |
| CAGACATACCCAGGAACAAC+AGG | 0.394883 | 4_3:+69393309 | None:intergenic |
| AGTGTATTTATTGACTTATA+CGG | 0.395554 | 4_3:+69393695 | None:intergenic |
| CTCCCTTTCATTTCTCTCGA+AGG | 0.396574 | 4_3:-69393532 | Msa0659100:intron |
| ACTGAAGTTGAATGGGAAAC+TGG | 0.399835 | 4_3:-69390582 | Msa0659100:CDS |
| GACTGAACCAGGCAAACATT+TGG | 0.404496 | 4_3:-69391486 | Msa0659100:CDS |
| GTCTAATTTATTGTAGGCTC+AGG | 0.408055 | 4_3:-69389956 | Msa0659100:three_prime_UTR |
| ACTGCAGGACGGAAGCTTAT+CGG | 0.411894 | 4_3:-69390285 | Msa0659100:intron |
| GGAGAGTTATAGGTAAATAC+AGG | 0.414003 | 4_3:+69391665 | None:intergenic |
| CTACTTACCCTGTTGTTCCT+GGG | 0.415236 | 4_3:-69393317 | Msa0659100:intron |
| GTGCTCCACTTCTGTGTGCC+GGG | 0.418161 | 4_3:-69391544 | Msa0659100:CDS |
| AAAAGCTTTGAGTGGGAGTT+CGG | 0.429852 | 4_3:+69393589 | None:intergenic |
| GGTGCTCCACTTCTGTGTGC+CGG | 0.433744 | 4_3:-69391545 | Msa0659100:CDS |
| ACTGAACCAGGCAAACATTT+GGG | 0.439930 | 4_3:-69391485 | Msa0659100:CDS |
| CATTCCCTGATGCCACTGCT+TGG | 0.448606 | 4_3:-69390608 | Msa0659100:CDS |
| TGGGCTGCTAGAGACACTTC+TGG | 0.465043 | 4_3:-69393563 | Msa0659100:CDS |
| TGTCTGACTAAAAGCGTGTT+TGG | 0.474906 | 4_3:-69389900 | Msa0659100:three_prime_UTR |
| ACACACTCTCAAGAACGATT+GGG | 0.475053 | 4_3:-69393346 | Msa0659100:CDS |
| AAGTGGAGCACCAGCGTCAA+GGG | 0.477411 | 4_3:+69391556 | None:intergenic |
| TACACACTCTCAAGAACGAT+TGG | 0.482360 | 4_3:-69393347 | Msa0659100:CDS |
| GCGTCAAGGGGTAAGTTGTC+AGG | 0.483209 | 4_3:+69391569 | None:intergenic |
| TCATACCATAATACTTCATC+GGG | 0.495385 | 4_3:+69391507 | None:intergenic |
| GAGAGCTCAAGGGGCTTGCT+AGG | 0.495481 | 4_3:+69390545 | None:intergenic |
| CTTGGTCTACTGAAGTTGAA+TGG | 0.496517 | 4_3:-69390590 | Msa0659100:CDS |
| GTCATACCATAATACTTCAT+CGG | 0.503227 | 4_3:+69391506 | None:intergenic |
| GTTGGCGTTGTGACAAAAGT+TGG | 0.504641 | 4_3:-69391800 | Msa0659100:CDS |
| ATCTGTGTAAGATATAAGAT+TGG | 0.509886 | 4_3:-69390002 | Msa0659100:three_prime_UTR |
| AACCTTCGAGAGAAATGAAA+GGG | 0.510126 | 4_3:+69393530 | None:intergenic |
| TTGGTCTACTGAAGTTGAAT+GGG | 0.524981 | 4_3:-69390589 | Msa0659100:CDS |
| AGCTTTGTGAAGCCTTTCCA+TGG | 0.525881 | 4_3:+69390152 | None:intergenic |
| CGGGCTATACACGGTGATCC+CGG | 0.532660 | 4_3:+69391526 | None:intergenic |
| GCATGAAATCAACACGGCCA+TGG | 0.534341 | 4_3:-69390169 | Msa0659100:CDS |
| ATGGAAAGACAGAGAGCTCA+AGG | 0.539760 | 4_3:+69390534 | None:intergenic |
| GTGATCCCGGCACACAGAAG+TGG | 0.541709 | 4_3:+69391539 | None:intergenic |
| TATAAAGGGACACGAACCTA+TGG | 0.552541 | 4_3:-69391641 | Msa0659100:CDS |
| AAATCAACACGGCCATGGAA+AGG | 0.552965 | 4_3:-69390164 | Msa0659100:CDS |
| CTTATCGGAGGGAGTAACAT+TGG | 0.554132 | 4_3:-69390270 | Msa0659100:CDS |
| AATGGGAAACTGGTCACTGT+AGG | 0.556394 | 4_3:-69390572 | Msa0659100:CDS |
| GAACCTTCGAGAGAAATGAA+AGG | 0.562759 | 4_3:+69393529 | None:intergenic |
| TGGAGGGATGAAAGAGACTC+AGG | 0.563071 | 4_3:-69390250 | Msa0659100:CDS |
| GAAGTGGAGCACCAGCGTCA+AGG | 0.573782 | 4_3:+69391555 | None:intergenic |
| CTACAAACTTGAGAAGGAGT+TGG | 0.582204 | 4_3:+69390098 | None:intergenic |
| CACACTCTCAAGAACGATTG+GGG | 0.590819 | 4_3:-69393345 | Msa0659100:CDS |
| GCAGGCTGCTATGGGAACCA+TGG | 0.590820 | 4_3:-69390660 | Msa0659100:intron |
| TATTATGGTATGACTGAACC+AGG | 0.592818 | 4_3:-69391497 | Msa0659100:CDS |
| TGGCCTCTACAAACTTGAGA+AGG | 0.595694 | 4_3:+69390092 | None:intergenic |
| CCCAACCAAAAGCTTTGAGT+GGG | 0.597594 | 4_3:+69393582 | None:intergenic |
| AAAATCAGAATAGCCACCAT+AGG | 0.602620 | 4_3:+69391625 | None:intergenic |
| TGGAAAGACAGAGAGCTCAA+GGG | 0.604195 | 4_3:+69390535 | None:intergenic |
| TCGGAGGGAGTAACATTGGA+GGG | 0.606287 | 4_3:-69390266 | Msa0659100:CDS |
| TAGACCAAGCAGTGGCATCA+GGG | 0.607212 | 4_3:+69390604 | None:intergenic |
| ATCGGAGGGAGTAACATTGG+AGG | 0.607417 | 4_3:-69390267 | Msa0659100:CDS |
| ACTCCTTCTCAAGTTTGTAG+AGG | 0.609994 | 4_3:-69390095 | Msa0659100:exon |
| GTGGGTGATAACGTTGGTGT+TGG | 0.610605 | 4_3:-69391755 | Msa0659100:CDS |
| GAAACTGAACTACATACCGC+TGG | 0.611677 | 4_3:+69391591 | None:intergenic |
| TTGATTCTTCAACATGTGTG+TGG | 0.611823 | 4_3:-69390067 | Msa0659100:three_prime_UTR |
| ATAATAGCAGCTGAGATCGA+TGG | 0.612153 | 4_3:-69393627 | Msa0659100:exon |
| GCCCAACCAAAAGCTTTGAG+TGG | 0.615088 | 4_3:+69393581 | None:intergenic |
| AAATGAGAAATCAAAAGTTG+AGG | 0.620431 | 4_3:+69390042 | None:intergenic |
| GACAACTTACCCCTTGACGC+TGG | 0.625682 | 4_3:-69391566 | Msa0659100:CDS |
| GGAAAGACAGAGAGCTCAAG+GGG | 0.626737 | 4_3:+69390536 | None:intergenic |
| AGTGTGAAAATTCTATATTG+TGG | 0.629238 | 4_3:-69393387 | Msa0659100:CDS |
| CACATGTTGAAGAATCAAAG+TGG | 0.632467 | 4_3:+69390072 | None:intergenic |
| ATGGGAAACTGGTCACTGTA+GGG | 0.633427 | 4_3:-69390571 | Msa0659100:CDS |
| AAAGTAAAGATGCTCATCCA+CGG | 0.635118 | 4_3:+69393735 | None:intergenic |
| TGATTCTATTAGGTGGACCG+TGG | 0.635984 | 4_3:-69393752 | None:intergenic |
| AGTGGAGCACCAGCGTCAAG+GGG | 0.637977 | 4_3:+69391557 | None:intergenic |
| AAAGGGACACGAACCTATGG+TGG | 0.638008 | 4_3:-69391638 | Msa0659100:CDS |
| TGTGTCTATGATGTAGTCCA+TGG | 0.640415 | 4_3:+69390643 | None:intergenic |
| CAGGAGATGCTCGATTTCTG+CGG | 0.641521 | 4_3:-69390231 | Msa0659100:CDS |
| ATACTTCATCGGGCTATACA+CGG | 0.644181 | 4_3:+69391517 | None:intergenic |
| TTCAGAGTGGGTGATAACGT+TGG | 0.661444 | 4_3:-69391761 | Msa0659100:CDS |
| GCAGGACGGAAGCTTATCGG+AGG | 0.666483 | 4_3:-69390282 | Msa0659100:intron |
| CAGGACGGAAGCTTATCGGA+GGG | 0.671442 | 4_3:-69390281 | Msa0659100:CDS |
| ATATCGGTTTGTGATTGATG+TGG | 0.686371 | 4_3:-69390121 | Msa0659100:CDS |
| AACTTCAGTAGACCAAGCAG+TGG | 0.689529 | 4_3:+69390596 | None:intergenic |
| AGACATACCCAGGAACAACA+GGG | 0.709790 | 4_3:+69393310 | None:intergenic |
| TAAGATGCATGAAATCAACA+CGG | 0.753982 | 4_3:-69390175 | Msa0659100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTGATTATTAAATTAGT+TGG | - | chr4_3:69391517-69391536 | Msa0659100:CDS | 10.0% |
| !!! | AAATTTAAAATATTTTGTGT+AGG | + | chr4_3:69392393-69392412 | None:intergenic | 10.0% |
| !! | TAAATATATATTCAGAAATA+AGG | + | chr4_3:69392522-69392541 | None:intergenic | 10.0% |
| !!! | TGTATAATATTTTATAAGAT+TGG | - | chr4_3:69393720-69393739 | Msa0659100:five_prime_UTR | 10.0% |
| !! | TAGAATAATATAGTAATTGT+TGG | - | chr4_3:69392424-69392443 | Msa0659100:intron | 15.0% |
| !!! | TTTTCATATTTGTTTTCTTT+TGG | - | chr4_3:69392739-69392758 | Msa0659100:intron | 15.0% |
| !!! | AGTGTATTTATTGACTTATA+CGG | + | chr4_3:69389811-69389830 | None:intergenic | 20.0% |
| !!! | TTTATTTTTTGTAGGGAAAA+TGG | - | chr4_3:69390080-69390099 | Msa0659100:exon | 20.0% |
| !! | TGTTGAATTGAATAGAAAAA+TGG | - | chr4_3:69390346-69390365 | Msa0659100:intron | 20.0% |
| !!! | TAATTCACTTTATTTACCTT+TGG | - | chr4_3:69390567-69390586 | Msa0659100:CDS | 20.0% |
| !! | ATTTAATTATCTGTTCGTAA+GGG | + | chr4_3:69390887-69390906 | None:intergenic | 20.0% |
| !! | TATTTAATTATCTGTTCGTA+AGG | + | chr4_3:69390888-69390907 | None:intergenic | 20.0% |
| !! | TGTTAAACATGATTAAAAAC+AGG | + | chr4_3:69390936-69390955 | None:intergenic | 20.0% |
| !!! | TTTTCAAATTATTAGTGTGT+CGG | + | chr4_3:69391051-69391070 | None:intergenic | 20.0% |
| !!! | TGTTCATTCTTTTTCATTAA+TGG | - | chr4_3:69391236-69391255 | Msa0659100:intron | 20.0% |
| !!! | TCTTTTTCATTAATGGTTTA+CGG | - | chr4_3:69391243-69391262 | Msa0659100:intron | 20.0% |
| !! | AAACTATTAATCAATAGTCA+AGG | + | chr4_3:69391551-69391570 | None:intergenic | 20.0% |
| !! | ATCCATAGTTTACTTATAAA+TGG | - | chr4_3:69392320-69392339 | Msa0659100:intron | 20.0% |
| !! | TCCATAGTTTACTTATAAAT+GGG | - | chr4_3:69392321-69392340 | Msa0659100:intron | 20.0% |
| !! | TTTGTTTATATACTCATTGA+CGG | + | chr4_3:69392595-69392614 | None:intergenic | 20.0% |
| !!! | GTTTAAATACAATTTTATGC+AGG | - | chr4_3:69392825-69392844 | Msa0659100:intron | 20.0% |
| !! | CAATTCAAATTCACATATTA+TGG | + | chr4_3:69393040-69393059 | None:intergenic | 20.0% |
| !! | TGAAAATTTGGATAATTCAT+TGG | + | chr4_3:69393182-69393201 | None:intergenic | 20.0% |
| ! | AGTGTGAAAATTCTATATTG+TGG | - | chr4_3:69390116-69390135 | Msa0659100:CDS | 25.0% |
| ! | TATTCAATTCAACAGAAAGA+CGG | + | chr4_3:69390340-69390359 | None:intergenic | 25.0% |
| !!! | ACCTCTAATTTTAATTTGAG+GGG | + | chr4_3:69390399-69390418 | None:intergenic | 25.0% |
| !!! | CACCTCTAATTTTAATTTGA+GGG | + | chr4_3:69390400-69390419 | None:intergenic | 25.0% |
| ! | CATACTTGTCTATTAGAATT+TGG | - | chr4_3:69390533-69390552 | Msa0659100:CDS | 25.0% |
| ! | AAACATACACATAATTCCAA+AGG | + | chr4_3:69390586-69390605 | None:intergenic | 25.0% |
| !! | TTTGGAATTATGTGTATGTT+TGG | - | chr4_3:69390585-69390604 | Msa0659100:CDS | 25.0% |
| ! | AGCTTATGAAAATTCTCATA+AGG | + | chr4_3:69390679-69390698 | None:intergenic | 25.0% |
| ! | TAGGTGGTTATTCATATAAT+AGG | + | chr4_3:69390913-69390932 | None:intergenic | 25.0% |
| ! | AAACATGATTAAAAACAGGT+AGG | + | chr4_3:69390932-69390951 | None:intergenic | 25.0% |
| ! | TAATCATGTTTAACACACTT+AGG | - | chr4_3:69390941-69390960 | Msa0659100:intron | 25.0% |
| !!! | ACTTTTGAGGATTCAAATTA+AGG | + | chr4_3:69390977-69390996 | None:intergenic | 25.0% |
| ! | TTAAGTGTAATTACAAGTGT+CGG | - | chr4_3:69391081-69391100 | Msa0659100:intron | 25.0% |
| ! | CATTAATCCTAGTAAACTAT+TGG | - | chr4_3:69391283-69391302 | Msa0659100:intron | 25.0% |
| !!! | ATGTAATTTTGAGGTTACAT+GGG | + | chr4_3:69391309-69391328 | None:intergenic | 25.0% |
| !!! | TATGTAATTTTGAGGTTACA+TGG | + | chr4_3:69391310-69391329 | None:intergenic | 25.0% |
| !! | AGACACATTATGTAATTTTG+AGG | + | chr4_3:69391318-69391337 | None:intergenic | 25.0% |
| ! | CTTGCTTATAAGTTATATGA+AGG | - | chr4_3:69391612-69391631 | Msa0659100:CDS | 25.0% |
| ! | AATGTGAAAAAATTCAGAGT+GGG | - | chr4_3:69391730-69391749 | Msa0659100:CDS | 25.0% |
| ! | TTATAGGTAAATACAGGTTT+AGG | + | chr4_3:69391835-69391854 | None:intergenic | 25.0% |
| !!! | ATCCAGAAATTTTGAAAACT+GGG | + | chr4_3:69392572-69392591 | None:intergenic | 25.0% |
| !!! | AACAAAAACAATGGATTGAT+TGG | - | chr4_3:69392775-69392794 | Msa0659100:intron | 25.0% |
| ! | AATTGACAGAGAATTATTGA+TGG | + | chr4_3:69393009-69393028 | None:intergenic | 25.0% |
| ! | AAATGAGAAATCAAAAGTTG+AGG | + | chr4_3:69393464-69393483 | None:intergenic | 25.0% |
| ! | ATCTGTGTAAGATATAAGAT+TGG | - | chr4_3:69393501-69393520 | Msa0659100:intron | 25.0% |
| ! | ATTGTCGTCTAATTTATTGT+AGG | - | chr4_3:69393541-69393560 | Msa0659100:CDS | 25.0% |
| ACCCCTCAAATTAAAATTAG+AGG | - | chr4_3:69390395-69390414 | Msa0659100:intron | 30.0% | |
| !!! | CCACCTCTAATTTTAATTTG+AGG | + | chr4_3:69390401-69390420 | None:intergenic | 30.0% |
| CCTCAAATTAAAATTAGAGG+TGG | - | chr4_3:69390398-69390417 | Msa0659100:intron | 30.0% | |
| CAAATTAAAATTAGAGGTGG+AGG | - | chr4_3:69390401-69390420 | Msa0659100:intron | 30.0% | |
| !! | TTTGCAACTATTCACTTTTG+AGG | + | chr4_3:69390990-69391009 | None:intergenic | 30.0% |
| ! | GATGATATGTATGCGATTTT+TGG | - | chr4_3:69391417-69391436 | Msa0659100:intron | 30.0% |
| ATTAATAGTTTATGCGTGCA+TGG | - | chr4_3:69391560-69391579 | Msa0659100:CDS | 30.0% | |
| CTTTGTGCAATAGTCAATAT+TGG | - | chr4_3:69391583-69391602 | Msa0659100:CDS | 30.0% | |
| AGTTATATGAAGGTAAAACC+AGG | - | chr4_3:69391622-69391641 | Msa0659100:CDS | 30.0% | |
| !!! | TTAACTTGCATTGACTTTTG+TGG | - | chr4_3:69391657-69391676 | Msa0659100:CDS | 30.0% |
| CAATGTGAAAAAATTCAGAG+TGG | - | chr4_3:69391729-69391748 | Msa0659100:CDS | 30.0% | |
| TGAGAATTGCAATCAAGATT+TGG | - | chr4_3:69391798-69391817 | Msa0659100:CDS | 30.0% | |
| ACCTATAACTCTCCTTATAA+AGG | - | chr4_3:69391847-69391866 | Msa0659100:intron | 30.0% | |
| CCTATAACTCTCCTTATAAA+GGG | - | chr4_3:69391848-69391867 | Msa0659100:intron | 30.0% | |
| TCATACCATAATACTTCATC+GGG | + | chr4_3:69391999-69392018 | None:intergenic | 30.0% | |
| GTCATACCATAATACTTCAT+CGG | + | chr4_3:69392000-69392019 | None:intergenic | 30.0% | |
| ! | ATCAAATTCGGTAAAGCATT+TGG | - | chr4_3:69392075-69392094 | Msa0659100:intron | 30.0% |
| ! | TCAAATTCGGTAAAGCATTT+GGG | - | chr4_3:69392076-69392095 | Msa0659100:intron | 30.0% |
| ! | ATCTTACCTTCATTTTCTCA+GGG | + | chr4_3:69392191-69392210 | None:intergenic | 30.0% |
| ! | TATCTTACCTTCATTTTCTC+AGG | + | chr4_3:69392192-69392211 | None:intergenic | 30.0% |
| !!! | TGGTTTTAAAGTTAATGGTG+TGG | + | chr4_3:69392215-69392234 | None:intergenic | 30.0% |
| !!! | CAGGTTGGTTTTAAAGTTAA+TGG | + | chr4_3:69392220-69392239 | None:intergenic | 30.0% |
| ACGAAATAAGAGTAAAACAG+CGG | + | chr4_3:69392263-69392282 | None:intergenic | 30.0% | |
| TTCGTCATACAGTTCTATAT+AGG | - | chr4_3:69392278-69392297 | Msa0659100:intron | 30.0% | |
| GTTCTATATAGGAGTTGTTA+TGG | - | chr4_3:69392289-69392308 | Msa0659100:intron | 30.0% | |
| GCCCATTTATAAGTAAACTA+TGG | + | chr4_3:69392325-69392344 | None:intergenic | 30.0% | |
| TAGTTTACTTATAAATGGGC+AGG | - | chr4_3:69392325-69392344 | Msa0659100:intron | 30.0% | |
| GAGAATAAGTGTAGGTTATT+TGG | + | chr4_3:69392458-69392477 | None:intergenic | 30.0% | |
| ! | GGGGCACTATATATATTAAT+TGG | + | chr4_3:69392551-69392570 | None:intergenic | 30.0% |
| !! | TCCAGAAATTTTGAAAACTG+GGG | + | chr4_3:69392571-69392590 | None:intergenic | 30.0% |
| !! | GATCCAGAAATTTTGAAAAC+TGG | + | chr4_3:69392573-69392592 | None:intergenic | 30.0% |
| CCTTTCTATTATTCAAACTC+AGG | + | chr4_3:69392633-69392652 | None:intergenic | 30.0% | |
| CCTGAGTTTGAATAATAGAA+AGG | - | chr4_3:69392630-69392649 | Msa0659100:intron | 30.0% | |
| GAGAACACATGATTTGATTA+TGG | + | chr4_3:69392710-69392729 | None:intergenic | 30.0% | |
| !! | TATTTGTTTTCTTTTGGACC+AGG | - | chr4_3:69392745-69392764 | Msa0659100:intron | 30.0% |
| !!! | TTGTTTTTGTTACAACAACC+TGG | + | chr4_3:69392766-69392785 | None:intergenic | 30.0% |
| GGTTGTTGTAACAAAAACAA+TGG | - | chr4_3:69392766-69392785 | Msa0659100:intron | 30.0% | |
| ! | TAAATGTTTCAGGTCAGATT+TGG | + | chr4_3:69393094-69393113 | None:intergenic | 30.0% |
| TGAGCATGTATAAATGTTTC+AGG | + | chr4_3:69393104-69393123 | None:intergenic | 30.0% | |
| ACATCAGACATGTGAAAATT+TGG | + | chr4_3:69393194-69393213 | None:intergenic | 30.0% | |
| TAAGATGCATGAAATCAACA+CGG | - | chr4_3:69393328-69393347 | Msa0659100:CDS | 30.0% | |
| ACAAAGCTGATGTGAAATAT+CGG | - | chr4_3:69393366-69393385 | Msa0659100:CDS | 30.0% | |
| AAAGTAAAGATGCTCATCCA+CGG | + | chr4_3:69389771-69389790 | None:intergenic | 35.0% | |
| AACCTTCGAGAGAAATGAAA+GGG | + | chr4_3:69389976-69389995 | None:intergenic | 35.0% | |
| AAAGAAAAACAGACATACCC+AGG | + | chr4_3:69390206-69390225 | None:intergenic | 35.0% | |
| AATTTGAGGGGTAAAGAACT+GGG | + | chr4_3:69390387-69390406 | None:intergenic | 35.0% | |
| TAATTTGAGGGGTAAAGAAC+TGG | + | chr4_3:69390388-69390407 | None:intergenic | 35.0% | |
| GTATGACATAATCATCAAGC+AGG | + | chr4_3:69390508-69390527 | None:intergenic | 35.0% | |
| CATGATTAAAAACAGGTAGG+TGG | + | chr4_3:69390929-69390948 | None:intergenic | 35.0% | |
| TACTTTGCAACTATGAAGCA+CGG | + | chr4_3:69391165-69391184 | None:intergenic | 35.0% | |
| CTGTGTTACAAATGAAGTCT+AGG | - | chr4_3:69391336-69391355 | Msa0659100:intron | 35.0% | |
| !! | GATATGTATGCGATTTTTGG+TGG | - | chr4_3:69391420-69391439 | Msa0659100:intron | 35.0% |
| ! | TCACTGCAGTTTTCTATCTT+TGG | - | chr4_3:69391480-69391499 | Msa0659100:intron | 35.0% |
| ! | TTTTGCAGGCATGAAATTGT+TGG | - | chr4_3:69391685-69391704 | Msa0659100:CDS | 35.0% |
| GGAGAGTTATAGGTAAATAC+AGG | + | chr4_3:69391841-69391860 | None:intergenic | 35.0% | |
| CCCTTTATAAGGAGAGTTAT+AGG | + | chr4_3:69391851-69391870 | None:intergenic | 35.0% | |
| AAAATCAGAATAGCCACCAT+AGG | + | chr4_3:69391881-69391900 | None:intergenic | 35.0% | |
| ! | TATAGCCCGATGAAGTATTA+TGG | - | chr4_3:69391991-69392010 | Msa0659100:intron | 35.0% |
| TATTATGGTATGACTGAACC+AGG | - | chr4_3:69392006-69392025 | Msa0659100:intron | 35.0% | |
| TACCGAATTTGATTGCAACA+TGG | + | chr4_3:69392068-69392087 | None:intergenic | 35.0% | |
| TATTAGTACCTCTCCAAACA+AGG | - | chr4_3:69392113-69392132 | Msa0659100:intron | 35.0% | |
| GTCAAGTGTGATTTAAGTGT+GGG | + | chr4_3:69392487-69392506 | None:intergenic | 35.0% | |
| TGTCAAGTGTGATTTAAGTG+TGG | + | chr4_3:69392488-69392507 | None:intergenic | 35.0% | |
| !! | CCAGAAATTTTGAAAACTGG+GGG | + | chr4_3:69392570-69392589 | None:intergenic | 35.0% |
| AGTCACATAGTAGGCAAAAT+TGG | - | chr4_3:69392677-69392696 | Msa0659100:intron | 35.0% | |
| ! | AATTTTATGCAGGCTGCTAT+GGG | - | chr4_3:69392835-69392854 | Msa0659100:intron | 35.0% |
| TTGGTCTACTGAAGTTGAAT+GGG | - | chr4_3:69392914-69392933 | Msa0659100:intron | 35.0% | |
| !! | ATATCGGTTTGTGATTGATG+TGG | - | chr4_3:69393382-69393401 | Msa0659100:CDS | 35.0% |
| CACATGTTGAAGAATCAAAG+TGG | + | chr4_3:69393434-69393453 | None:intergenic | 35.0% | |
| TTGATTCTTCAACATGTGTG+TGG | - | chr4_3:69393436-69393455 | Msa0659100:intron | 35.0% | |
| GTCTAATTTATTGTAGGCTC+AGG | - | chr4_3:69393547-69393566 | Msa0659100:CDS | 35.0% | |
| ATAATAGCAGCTGAGATCGA+TGG | - | chr4_3:69389876-69389895 | Msa0659100:three_prime_UTR | 40.0% | |
| !! | AAAAGCTTTGAGTGGGAGTT+CGG | + | chr4_3:69389917-69389936 | None:intergenic | 40.0% |
| GAACCTTCGAGAGAAATGAA+AGG | + | chr4_3:69389977-69389996 | None:intergenic | 40.0% | |
| TACACACTCTCAAGAACGAT+TGG | - | chr4_3:69390156-69390175 | Msa0659100:CDS | 40.0% | |
| ACACACTCTCAAGAACGATT+GGG | - | chr4_3:69390157-69390176 | Msa0659100:CDS | 40.0% | |
| AGTTGCAAAGCTATGAAGCA+CGG | - | chr4_3:69391001-69391020 | Msa0659100:intron | 40.0% | |
| AAAGCTATGAAGCACGGATA+CGG | - | chr4_3:69391007-69391026 | Msa0659100:intron | 40.0% | |
| ACATGGGCCAATAGTTTACT+AGG | + | chr4_3:69391293-69391312 | None:intergenic | 40.0% | |
| CACTGCAAAGACTGGAAATA+AGG | - | chr4_3:69391395-69391414 | Msa0659100:intron | 40.0% | |
| CAATATTCCCGATCTAGAAG+CGG | - | chr4_3:69391451-69391470 | Msa0659100:intron | 40.0% | |
| AAAGTTTCCGCTTCTAGATC+GGG | + | chr4_3:69391461-69391480 | None:intergenic | 40.0% | |
| GAAAGTTTCCGCTTCTAGAT+CGG | + | chr4_3:69391462-69391481 | None:intergenic | 40.0% | |
| ! | CTGCAGTTTTCTATCTTTGG+AGG | - | chr4_3:69391483-69391502 | Msa0659100:intron | 40.0% |
| AGGTAAAACCAGGACATCTT+TGG | - | chr4_3:69391632-69391651 | Msa0659100:CDS | 40.0% | |
| GGTAAAACCAGGACATCTTT+GGG | - | chr4_3:69391633-69391652 | Msa0659100:CDS | 40.0% | |
| AGTTAATCCCAAAGATGTCC+TGG | + | chr4_3:69391643-69391662 | None:intergenic | 40.0% | |
| ! | CTTTTGTGGTTGTGTTTTGC+AGG | - | chr4_3:69391671-69391690 | Msa0659100:CDS | 40.0% |
| TAGGTTCGTGTCCCTTTATA+AGG | + | chr4_3:69391862-69391881 | None:intergenic | 40.0% | |
| TATAAAGGGACACGAACCTA+TGG | - | chr4_3:69391862-69391881 | Msa0659100:intron | 40.0% | |
| ! | TGGTGGCTATTCTGATTTTG+TGG | - | chr4_3:69391882-69391901 | Msa0659100:intron | 40.0% |
| ! | ATTTTGTGGTTGTTCACCAG+CGG | - | chr4_3:69391896-69391915 | Msa0659100:intron | 40.0% |
| ATACTTCATCGGGCTATACA+CGG | + | chr4_3:69391989-69392008 | None:intergenic | 40.0% | |
| ACTGAACCAGGCAAACATTT+GGG | - | chr4_3:69392018-69392037 | Msa0659100:intron | 40.0% | |
| GGCCATGTTGCAATCAAATT+CGG | - | chr4_3:69392063-69392082 | Msa0659100:intron | 40.0% | |
| ATCAGCACCAAGTTTGTCAA+TGG | + | chr4_3:69392148-69392167 | None:intergenic | 40.0% | |
| ! | CTTCATTTTCTCAGGGTCTT+TGG | + | chr4_3:69392184-69392203 | None:intergenic | 40.0% |
| CAAAGACCCTGAGAAAATGA+AGG | - | chr4_3:69392182-69392201 | Msa0659100:intron | 40.0% | |
| AAAACCAACCTGTTTCGTCT+AGG | - | chr4_3:69392228-69392247 | Msa0659100:intron | 40.0% | |
| ATAACCTAGACGAAACAGGT+TGG | + | chr4_3:69392235-69392254 | None:intergenic | 40.0% | |
| GGCAAAGAGAGAATAAGTGT+AGG | + | chr4_3:69392466-69392485 | None:intergenic | 40.0% | |
| ! | CCCCCAGTTTTCAAAATTTC+TGG | - | chr4_3:69392567-69392586 | Msa0659100:intron | 40.0% |
| ! | CAATTTTATGCAGGCTGCTA+TGG | - | chr4_3:69392834-69392853 | Msa0659100:intron | 40.0% |
| TGTGTCTATGATGTAGTCCA+TGG | + | chr4_3:69392863-69392882 | None:intergenic | 40.0% | |
| CTTGGTCTACTGAAGTTGAA+TGG | - | chr4_3:69392913-69392932 | Msa0659100:intron | 40.0% | |
| ACTGAAGTTGAATGGGAAAC+TGG | - | chr4_3:69392921-69392940 | Msa0659100:intron | 40.0% | |
| TCTGTCTTTCCATTAGTTGC+AGG | - | chr4_3:69392979-69392998 | Msa0659100:intron | 40.0% | |
| GATGGTTTACCTGCAACTAA+TGG | + | chr4_3:69392991-69393010 | None:intergenic | 40.0% | |
| GGAAGTAACAGACTCATTCT+TGG | + | chr4_3:69393073-69393092 | None:intergenic | 40.0% | |
| CTACAAACTTGAGAAGGAGT+TGG | + | chr4_3:69393408-69393427 | None:intergenic | 40.0% | |
| ACTCCTTCTCAAGTTTGTAG+AGG | - | chr4_3:69393408-69393427 | Msa0659100:CDS | 40.0% | |
| !! | CACAGATCTTAGCTTTTCTC+AGG | + | chr4_3:69393488-69393507 | None:intergenic | 40.0% |
| ! | TGTCTGACTAAAAGCGTGTT+TGG | - | chr4_3:69393603-69393622 | Msa0659100:CDS | 40.0% |
| ! | CTAAAAGCGTGTTTGGTCTT+AGG | - | chr4_3:69393610-69393629 | Msa0659100:CDS | 40.0% |
| TTTGAGTGGGAGTTCGGTTT+CGG | + | chr4_3:69389911-69389930 | None:intergenic | 45.0% | |
| ! | GAACTCCCACTCAAAGCTTT+TGG | - | chr4_3:69389916-69389935 | Msa0659100:three_prime_UTR | 45.0% |
| ! | TCCCACTCAAAGCTTTTGGT+TGG | - | chr4_3:69389920-69389939 | Msa0659100:three_prime_UTR | 45.0% |
| !! | CCCAACCAAAAGCTTTGAGT+GGG | + | chr4_3:69389924-69389943 | None:intergenic | 45.0% |
| !! | CCCACTCAAAGCTTTTGGTT+GGG | - | chr4_3:69389921-69389940 | Msa0659100:three_prime_UTR | 45.0% |
| CTCCCTTTCATTTCTCTCGA+AGG | - | chr4_3:69389971-69389990 | Msa0659100:three_prime_UTR | 45.0% | |
| CACACTCTCAAGAACGATTG+GGG | - | chr4_3:69390158-69390177 | Msa0659100:CDS | 45.0% | |
| ACTACTTACCCTGTTGTTCC+TGG | - | chr4_3:69390185-69390204 | Msa0659100:CDS | 45.0% | |
| CTACTTACCCTGTTGTTCCT+GGG | - | chr4_3:69390186-69390205 | Msa0659100:CDS | 45.0% | |
| AGACATACCCAGGAACAACA+GGG | + | chr4_3:69390196-69390215 | None:intergenic | 45.0% | |
| ! | TCTGTTCGTAAGGGCTTGTT+TGG | + | chr4_3:69390878-69390897 | None:intergenic | 45.0% |
| TTCAAGTGCACTGCAAAGAC+TGG | - | chr4_3:69391387-69391406 | Msa0659100:intron | 45.0% | |
| GTTGGCGTTGTGACAAAAGT+TGG | - | chr4_3:69391703-69391722 | Msa0659100:CDS | 45.0% | |
| ! | TTCAGAGTGGGTGATAACGT+TGG | - | chr4_3:69391742-69391761 | Msa0659100:CDS | 45.0% |
| GAAACTGAACTACATACCGC+TGG | + | chr4_3:69391915-69391934 | None:intergenic | 45.0% | |
| GACTGAACCAGGCAAACATT+TGG | - | chr4_3:69392017-69392036 | Msa0659100:intron | 45.0% | |
| ! | CTCAGTTTCCTTGTTTGGAG+AGG | + | chr4_3:69392124-69392143 | None:intergenic | 45.0% |
| CTCTCCAAACAAGGAAACTG+AGG | - | chr4_3:69392122-69392141 | Msa0659100:intron | 45.0% | |
| ATGGCCTCAGTTTCCTTGTT+TGG | + | chr4_3:69392129-69392148 | None:intergenic | 45.0% | |
| ACTGAGGCCATTGACAAACT+TGG | - | chr4_3:69392138-69392157 | Msa0659100:intron | 45.0% | |
| ! | TCTCAGGGTCTTTGGAAACA+AGG | + | chr4_3:69392176-69392195 | None:intergenic | 45.0% |
| GAGCATAACCTAGACGAAAC+AGG | + | chr4_3:69392239-69392258 | None:intergenic | 45.0% | |
| TTATAAATGGGCAGGTCGCT+AGG | - | chr4_3:69392333-69392352 | Msa0659100:intron | 45.0% | |
| TATAAATGGGCAGGTCGCTA+GGG | - | chr4_3:69392334-69392353 | Msa0659100:intron | 45.0% | |
| ATGCATGTGTGATGTGGTGT+GGG | - | chr4_3:69392361-69392380 | Msa0659100:intron | 45.0% | |
| CAACTCTGCAGTCACATAGT+AGG | - | chr4_3:69392668-69392687 | Msa0659100:intron | 45.0% | |
| AACTTCAGTAGACCAAGCAG+TGG | + | chr4_3:69392910-69392929 | None:intergenic | 45.0% | |
| AATGGGAAACTGGTCACTGT+AGG | - | chr4_3:69392931-69392950 | Msa0659100:intron | 45.0% | |
| ATGGGAAACTGGTCACTGTA+GGG | - | chr4_3:69392932-69392951 | Msa0659100:intron | 45.0% | |
| TGGAAAGACAGAGAGCTCAA+GGG | + | chr4_3:69392971-69392990 | None:intergenic | 45.0% | |
| ATGGAAAGACAGAGAGCTCA+AGG | + | chr4_3:69392972-69392991 | None:intergenic | 45.0% | |
| ATGTCTGATGTCTTGACTGC+AGG | - | chr4_3:69393203-69393222 | Msa0659100:intron | 45.0% | |
| CTTATCGGAGGGAGTAACAT+TGG | - | chr4_3:69393233-69393252 | Msa0659100:intron | 45.0% | |
| AAATCAACACGGCCATGGAA+AGG | - | chr4_3:69393339-69393358 | Msa0659100:CDS | 45.0% | |
| ! | AGCTTTGTGAAGCCTTTCCA+TGG | + | chr4_3:69393354-69393373 | None:intergenic | 45.0% |
| TGGCCTCTACAAACTTGAGA+AGG | + | chr4_3:69393414-69393433 | None:intergenic | 45.0% | |
| !!! | TTTTTATTTTTATTTTTTGT+AGG | - | chr4_3:69390072-69390091 | Msa0659100:three_prime_UTR | 5.0% |
| !!! | TTTTATTTTTATTTTTTGTA+GGG | - | chr4_3:69390073-69390092 | Msa0659100:three_prime_UTR | 5.0% |
| TTGAGTGGGAGTTCGGTTTC+GGG | + | chr4_3:69389910-69389929 | None:intergenic | 50.0% | |
| !! | GCCCAACCAAAAGCTTTGAG+TGG | + | chr4_3:69389925-69389944 | None:intergenic | 50.0% |
| CAGACATACCCAGGAACAAC+AGG | + | chr4_3:69390197-69390216 | None:intergenic | 50.0% | |
| !! | TACAAGTGTCGGTCTCGTGT+TGG | - | chr4_3:69391092-69391111 | Msa0659100:intron | 50.0% |
| TATGAAGCACGGACACTCCT+CGG | + | chr4_3:69391154-69391173 | None:intergenic | 50.0% | |
| ! | GTGGGTGATAACGTTGGTGT+TGG | - | chr4_3:69391748-69391767 | Msa0659100:CDS | 50.0% |
| AAAGGGACACGAACCTATGG+TGG | - | chr4_3:69391865-69391884 | Msa0659100:intron | 50.0% | |
| ACCAGGCAAACATTTGGGAG+TGG | - | chr4_3:69392023-69392042 | Msa0659100:intron | 50.0% | |
| GCAAACATTTGGGAGTGGCA+GGG | - | chr4_3:69392028-69392047 | Msa0659100:intron | 50.0% | |
| ! | CGGTAAAGCATTTGGGCTGA+AGG | - | chr4_3:69392083-69392102 | Msa0659100:intron | 50.0% |
| GATGCATGTGTGATGTGGTG+TGG | - | chr4_3:69392360-69392379 | Msa0659100:intron | 50.0% | |
| TAGACCAAGCAGTGGCATCA+GGG | + | chr4_3:69392902-69392921 | None:intergenic | 50.0% | |
| GGAAAGACAGAGAGCTCAAG+GGG | + | chr4_3:69392970-69392989 | None:intergenic | 50.0% | |
| CTGATGTCTTGACTGCAGGA+CGG | - | chr4_3:69393207-69393226 | Msa0659100:intron | 50.0% | |
| ACTGCAGGACGGAAGCTTAT+CGG | - | chr4_3:69393218-69393237 | Msa0659100:intron | 50.0% | |
| ATCGGAGGGAGTAACATTGG+AGG | - | chr4_3:69393236-69393255 | Msa0659100:intron | 50.0% | |
| TCGGAGGGAGTAACATTGGA+GGG | - | chr4_3:69393237-69393256 | Msa0659100:intron | 50.0% | |
| TGGAGGGATGAAAGAGACTC+AGG | - | chr4_3:69393253-69393272 | Msa0659100:intron | 50.0% | |
| CAGGAGATGCTCGATTTCTG+CGG | - | chr4_3:69393272-69393291 | Msa0659100:intron | 50.0% | |
| GCATGAAATCAACACGGCCA+TGG | - | chr4_3:69393334-69393353 | Msa0659100:CDS | 50.0% | |
| TGGGCTGCTAGAGACACTTC+TGG | - | chr4_3:69389940-69389959 | Msa0659100:three_prime_UTR | 55.0% | |
| TGAAGCACGGATACGGACAC+CGG | - | chr4_3:69391014-69391033 | Msa0659100:intron | 55.0% | |
| ! | TGTCGGTCTCGTGTTGGTGT+CGG | - | chr4_3:69391098-69391117 | Msa0659100:intron | 55.0% |
| GATTAGGCGTGTCCTGGTGT+CGG | + | chr4_3:69391132-69391151 | None:intergenic | 55.0% | |
| GCGTCAAGGGGTAAGTTGTC+AGG | + | chr4_3:69391937-69391956 | None:intergenic | 55.0% | |
| GACAACTTACCCCTTGACGC+TGG | - | chr4_3:69391937-69391956 | Msa0659100:intron | 55.0% | |
| ! | AAGTGGAGCACCAGCGTCAA+GGG | + | chr4_3:69391950-69391969 | None:intergenic | 55.0% |
| GCCACTCCCAAATGTTTGCC+TGG | + | chr4_3:69392027-69392046 | None:intergenic | 55.0% | |
| GGCAAACATTTGGGAGTGGC+AGG | - | chr4_3:69392027-69392046 | Msa0659100:intron | 55.0% | |
| GGACGGATGCATGTGTGATG+TGG | - | chr4_3:69392355-69392374 | Msa0659100:intron | 55.0% | |
| CATTCCCTGATGCCACTGCT+TGG | - | chr4_3:69392895-69392914 | Msa0659100:intron | 55.0% | |
| GTAGACCAAGCAGTGGCATC+AGG | + | chr4_3:69392903-69392922 | None:intergenic | 55.0% | |
| CAGGACGGAAGCTTATCGGA+GGG | - | chr4_3:69393222-69393241 | Msa0659100:intron | 55.0% | |
| ! | TGTGTCGGCGTGTCAGTGTC+CGG | + | chr4_3:69391036-69391055 | None:intergenic | 60.0% |
| TCGGACATGTGTCCGACACC+AGG | - | chr4_3:69391117-69391136 | Msa0659100:intron | 60.0% | |
| ACCAGGACACGCCTAATCCG+AGG | - | chr4_3:69391134-69391153 | Msa0659100:intron | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+TGG | + | chr4_3:69391138-69391157 | None:intergenic | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | + | chr4_3:69391148-69391167 | None:intergenic | 60.0% | |
| ! | AGTGGAGCACCAGCGTCAAG+GGG | + | chr4_3:69391949-69391968 | None:intergenic | 60.0% |
| ! | GAAGTGGAGCACCAGCGTCA+AGG | + | chr4_3:69391951-69391970 | None:intergenic | 60.0% |
| GGTGCTCCACTTCTGTGTGC+CGG | - | chr4_3:69391958-69391977 | Msa0659100:intron | 60.0% | |
| GTGCTCCACTTCTGTGTGCC+GGG | - | chr4_3:69391959-69391978 | Msa0659100:intron | 60.0% | |
| GTGATCCCGGCACACAGAAG+TGG | + | chr4_3:69391967-69391986 | None:intergenic | 60.0% | |
| CGGGCTATACACGGTGATCC+CGG | + | chr4_3:69391980-69391999 | None:intergenic | 60.0% | |
| CATTTGGGAGTGGCAGGGCT+TGG | - | chr4_3:69392033-69392052 | Msa0659100:intron | 60.0% | |
| AATGGGCAGGTCGCTAGGGA+CGG | - | chr4_3:69392338-69392357 | Msa0659100:intron | 60.0% | |
| GCAGGCTGCTATGGGAACCA+TGG | - | chr4_3:69392843-69392862 | Msa0659100:intron | 60.0% | |
| ! | GAGAGCTCAAGGGGCTTGCT+AGG | + | chr4_3:69392961-69392980 | None:intergenic | 60.0% |
| GCAGGACGGAAGCTTATCGG+AGG | - | chr4_3:69393221-69393240 | Msa0659100:intron | 60.0% | |
| TTGGGAGTGGCAGGGCTTGG+TGG | - | chr4_3:69392036-69392055 | Msa0659100:intron | 65.0% | |
| ! | TGGGAGTGGCAGGGCTTGGT+GGG | - | chr4_3:69392037-69392056 | Msa0659100:intron | 65.0% |
| !! | GTGGCAGGGCTTGGTGGGTT+AGG | - | chr4_3:69392042-69392061 | Msa0659100:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 69389763 | 69393762 | 69389763 | ID=Msa0659100;Name=Msa0659100 |
| chr4_3 | mRNA | 69389763 | 69393762 | 69389763 | ID=Msa0659100-mRNA-1;Parent=Msa0659100;Name=Msa0659100-mRNA-1;_AED=0.13;_eAED=0.13;_QI=132|0.75|0.8|1|1|1|5|335|305 |
| chr4_3 | exon | 69389763 | 69390300 | 69389763 | ID=Msa0659100-mRNA-1:exon:20377;Parent=Msa0659100-mRNA-1 |
| chr4_3 | exon | 69390525 | 69390678 | 69390525 | ID=Msa0659100-mRNA-1:exon:20376;Parent=Msa0659100-mRNA-1 |
| chr4_3 | exon | 69391484 | 69391832 | 69391484 | ID=Msa0659100-mRNA-1:exon:20375;Parent=Msa0659100-mRNA-1 |
| chr4_3 | exon | 69393318 | 69393431 | 69393318 | ID=Msa0659100-mRNA-1:exon:20374;Parent=Msa0659100-mRNA-1 |
| chr4_3 | exon | 69393533 | 69393762 | 69393533 | ID=Msa0659100-mRNA-1:exon:20373;Parent=Msa0659100-mRNA-1 |
| chr4_3 | five_prime_UTR | 69393631 | 69393762 | 69393631 | ID=Msa0659100-mRNA-1:five_prime_utr;Parent=Msa0659100-mRNA-1 |
| chr4_3 | CDS | 69393533 | 69393630 | 69393533 | ID=Msa0659100-mRNA-1:cds;Parent=Msa0659100-mRNA-1 |
| chr4_3 | CDS | 69393318 | 69393431 | 69393318 | ID=Msa0659100-mRNA-1:cds;Parent=Msa0659100-mRNA-1 |
| chr4_3 | CDS | 69391484 | 69391832 | 69391484 | ID=Msa0659100-mRNA-1:cds;Parent=Msa0659100-mRNA-1 |
| chr4_3 | CDS | 69390525 | 69390678 | 69390525 | ID=Msa0659100-mRNA-1:cds;Parent=Msa0659100-mRNA-1 |
| chr4_3 | CDS | 69390098 | 69390300 | 69390098 | ID=Msa0659100-mRNA-1:cds;Parent=Msa0659100-mRNA-1 |
| chr4_3 | three_prime_UTR | 69389763 | 69390097 | 69389763 | ID=Msa0659100-mRNA-1:three_prime_utr;Parent=Msa0659100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
