Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459080 | XP_024633413.1 | 96.699 | 515 | 17 | 0 | 1 | 515 | 1 | 515 | 0.0 | 1008 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459080 | sp|F4I9E1|NFD4_ARATH | 38.447 | 528 | 294 | 11 | 7 | 511 | 43 | 562 | 8.16e-100 | 315 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459080 | A0A072UZ85 | 97.089 | 481 | 14 | 0 | 1 | 481 | 1 | 481 | 0.0 | 944 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026120 | Msa0459080 | 0.851406 | 9.064012e-61 | -8.615850e-47 |
| Msa0035090 | Msa0459080 | 0.817073 | 3.984417e-52 | -8.615850e-47 |
| Msa0039200 | Msa0459080 | 0.815031 | 1.138293e-51 | -8.615850e-47 |
| Msa0040190 | Msa0459080 | 0.813447 | 2.548304e-51 | -8.615850e-47 |
| Msa0046670 | Msa0459080 | 0.825421 | 4.731105e-54 | -8.615850e-47 |
| Msa0050400 | Msa0459080 | 0.802888 | 4.529659e-49 | -8.615850e-47 |
| Msa0057740 | Msa0459080 | 0.800354 | 1.499320e-48 | -8.615850e-47 |
| Msa0065190 | Msa0459080 | 0.811148 | 8.091156e-51 | -8.615850e-47 |
| Msa0073660 | Msa0459080 | 0.802262 | 6.099351e-49 | -8.615850e-47 |
| Msa0086820 | Msa0459080 | 0.812941 | 3.290613e-51 | -8.615850e-47 |
| Msa0089410 | Msa0459080 | 0.802709 | 4.932516e-49 | -8.615850e-47 |
| Msa0090350 | Msa0459080 | 0.818025 | 2.430561e-52 | -8.615850e-47 |
| Msa0092750 | Msa0459080 | 0.831508 | 1.604494e-55 | -8.615850e-47 |
| Msa0110500 | Msa0459080 | 0.814198 | 1.740890e-51 | -8.615850e-47 |
| Msa0112800 | Msa0459080 | 0.850443 | 1.692086e-60 | -8.615850e-47 |
| Msa0117300 | Msa0459080 | 0.812357 | 4.415712e-51 | -8.615850e-47 |
| Msa0130120 | Msa0459080 | 0.813147 | 2.965298e-51 | -8.615850e-47 |
| Msa0133670 | Msa0459080 | 0.812974 | 3.236155e-51 | -8.615850e-47 |
| Msa0133880 | Msa0459080 | 0.811528 | 6.692871e-51 | -8.615850e-47 |
| Msa0134550 | Msa0459080 | 0.813058 | 3.102314e-51 | -8.615850e-47 |
| Msa0136520 | Msa0459080 | 0.806794 | 6.919548e-50 | -8.615850e-47 |
| Msa0137810 | Msa0459080 | 0.801180 | 1.016823e-48 | -8.615850e-47 |
| Msa0138380 | Msa0459080 | 0.811498 | 6.794822e-51 | -8.615850e-47 |
| Msa0143360 | Msa0459080 | 0.802785 | 4.757551e-49 | -8.615850e-47 |
| Msa0156780 | Msa0459080 | 0.824169 | 9.334704e-54 | -8.615850e-47 |
| Msa0166580 | Msa0459080 | 0.852530 | 4.347034e-61 | -8.615850e-47 |
| Msa0181290 | Msa0459080 | 0.808490 | 3.018839e-50 | -8.615850e-47 |
| Msa0184030 | Msa0459080 | 0.833059 | 6.626388e-56 | -8.615850e-47 |
| Msa0184120 | Msa0459080 | 0.815064 | 1.119562e-51 | -8.615850e-47 |
| Msa0197600 | Msa0459080 | 0.823423 | 1.396181e-53 | -8.615850e-47 |
| Msa0198140 | Msa0459080 | 0.801779 | 7.664776e-49 | -8.615850e-47 |
| Msa0198220 | Msa0459080 | 0.804318 | 2.287988e-49 | -8.615850e-47 |
| Msa0201910 | Msa0459080 | 0.845232 | 4.616069e-59 | -8.615850e-47 |
| Msa0206600 | Msa0459080 | 0.804233 | 2.383775e-49 | -8.615850e-47 |
| Msa0207220 | Msa0459080 | 0.802399 | 5.714416e-49 | -8.615850e-47 |
| Msa0207900 | Msa0459080 | 0.800097 | 1.690987e-48 | -8.615850e-47 |
| Msa0207990 | Msa0459080 | 0.802604 | 5.184429e-49 | -8.615850e-47 |
| Msa0216010 | Msa0459080 | 0.814746 | 1.316877e-51 | -8.615850e-47 |
| Msa0218480 | Msa0459080 | 0.802712 | 4.925733e-49 | -8.615850e-47 |
| Msa0218590 | Msa0459080 | 0.805704 | 1.173957e-49 | -8.615850e-47 |
| Msa0221940 | Msa0459080 | 0.816152 | 6.407460e-52 | -8.615850e-47 |
| Msa0366020 | Msa0459080 | 0.848078 | 7.705096e-60 | -8.615850e-47 |
| Msa0372380 | Msa0459080 | 0.802602 | 5.188835e-49 | -8.615850e-47 |
| Msa0372990 | Msa0459080 | 0.805063 | 1.599518e-49 | -8.615850e-47 |
| Msa0377460 | Msa0459080 | 0.834079 | 3.686676e-56 | -8.615850e-47 |
| Msa0379720 | Msa0459080 | 0.858491 | 7.942255e-63 | -8.615850e-47 |
| Msa0379900 | Msa0459080 | 0.801146 | 1.033035e-48 | -8.615850e-47 |
| Msa0414010 | Msa0459080 | 0.854126 | 1.514898e-61 | -8.615850e-47 |
| Msa0421390 | Msa0459080 | 0.804462 | 2.135424e-49 | -8.615850e-47 |
| Msa0426860 | Msa0459080 | 0.835505 | 1.614212e-56 | -8.615850e-47 |
| Msa0426890 | Msa0459080 | 0.840887 | 6.633814e-58 | -8.615850e-47 |
| Msa0426990 | Msa0459080 | 0.817284 | 3.571906e-52 | -8.615850e-47 |
| Msa0427050 | Msa0459080 | 0.822968 | 1.782799e-53 | -8.615850e-47 |
| Msa0429100 | Msa0459080 | 0.853043 | 3.101333e-61 | -8.615850e-47 |
| Msa0429130 | Msa0459080 | 0.852428 | 4.646936e-61 | -8.615850e-47 |
| Msa0431940 | Msa0459080 | 0.820498 | 6.643523e-53 | -8.615850e-47 |
| Msa0451370 | Msa0459080 | 0.802147 | 6.441168e-49 | -8.615850e-47 |
| Msa0452010 | Msa0459080 | 0.814793 | 1.285362e-51 | -8.615850e-47 |
| Msa0453310 | Msa0459080 | 0.824280 | 8.793551e-54 | -8.615850e-47 |
| Msa0456480 | Msa0459080 | 0.822499 | 2.292441e-53 | -8.615850e-47 |
| Msa0459080 | Msa0473320 | 0.826108 | 3.251169e-54 | -8.615850e-47 |
| Msa0459080 | Msa0473450 | 0.821904 | 3.150565e-53 | -8.615850e-47 |
| Msa0459080 | Msa0505610 | 0.871850 | 4.990051e-67 | -8.615850e-47 |
| Msa0459080 | Msa0512770 | 0.808211 | 3.462345e-50 | -8.615850e-47 |
| Msa0459080 | Msa0517400 | 0.834343 | 3.166978e-56 | -8.615850e-47 |
| Msa0459080 | Msa0520810 | 0.835641 | 1.491107e-56 | -8.615850e-47 |
| Msa0459080 | Msa0543310 | 0.800264 | 1.563691e-48 | -8.615850e-47 |
| Msa0459080 | Msa0549330 | 0.821891 | 3.172909e-53 | -8.615850e-47 |
| Msa0459080 | Msa0553520 | 0.802747 | 4.843983e-49 | -8.615850e-47 |
| Msa0459080 | Msa0554410 | 0.804012 | 2.649171e-49 | -8.615850e-47 |
| Msa0459080 | Msa0558890 | 0.815862 | 7.439480e-52 | -8.615850e-47 |
| Msa0459080 | Msa0568490 | 0.839973 | 1.149857e-57 | -8.615850e-47 |
| Msa0459080 | Msa0568810 | 0.801132 | 1.040015e-48 | -8.615850e-47 |
| Msa0459080 | Msa0569630 | 0.837373 | 5.402120e-57 | -8.615850e-47 |
| Msa0459080 | Msa0581440 | 0.805662 | 1.198104e-49 | -8.615850e-47 |
| Msa0459080 | Msa0587060 | 0.822690 | 2.069424e-53 | -8.615850e-47 |
| Msa0459080 | Msa0595240 | 0.831485 | 1.625813e-55 | -8.615850e-47 |
| Msa0459080 | Msa0607620 | 0.800679 | 1.287238e-48 | -8.615850e-47 |
| Msa0459080 | Msa0608940 | 0.801571 | 8.457475e-49 | -8.615850e-47 |
| Msa0459080 | Msa0619480 | 0.808992 | 2.358305e-50 | -8.615850e-47 |
| Msa0459080 | Msa0622400 | 0.819731 | 9.955107e-53 | -8.615850e-47 |
| Msa0459080 | Msa0626890 | 0.814137 | 1.795120e-51 | -8.615850e-47 |
| Msa0459080 | Msa0635350 | 0.810018 | 1.420015e-50 | -8.615850e-47 |
| Msa0459080 | Msa0638040 | 0.804293 | 2.315573e-49 | -8.615850e-47 |
| Msa0459080 | Msa0648160 | 0.812666 | 3.780468e-51 | -8.615850e-47 |
| Msa0459080 | Msa0648170 | 0.848692 | 5.211803e-60 | -8.615850e-47 |
| Msa0459080 | Msa0648300 | 0.808855 | 2.522375e-50 | -8.615850e-47 |
| Msa0459080 | Msa0653710 | 0.831571 | 1.548371e-55 | -8.615850e-47 |
| Msa0459080 | Msa0659640 | 0.811255 | 7.672518e-51 | -8.615850e-47 |
| Msa0459080 | Msa0665010 | 0.814426 | 1.549722e-51 | -8.615850e-47 |
| Msa0459080 | Msa0672350 | 0.808141 | 3.583365e-50 | -8.615850e-47 |
| Msa0459080 | Msa0677110 | 0.806124 | 9.578767e-50 | -8.615850e-47 |
| Msa0459080 | Msa0698880 | 0.801191 | 1.011421e-48 | -8.615850e-47 |
| Msa0459080 | Msa0698900 | 0.803053 | 4.188577e-49 | -8.615850e-47 |
| Msa0459080 | Msa0713530 | 0.847211 | 1.334745e-59 | -8.615850e-47 |
| Msa0459080 | Msa0729780 | 0.821600 | 3.703804e-53 | -8.615850e-47 |
| Msa0459080 | Msa0733570 | 0.800617 | 1.325133e-48 | -8.615850e-47 |
| Msa0459080 | Msa0736930 | 0.813663 | 2.283744e-51 | -8.615850e-47 |
| Msa0459080 | Msa0738600 | 0.823652 | 1.234516e-53 | -8.615850e-47 |
| Msa0459080 | Msa0741710 | 0.800370 | 1.487675e-48 | -8.615850e-47 |
| Msa0459080 | Msa0747660 | 0.820580 | 6.363761e-53 | -8.615850e-47 |
| Msa0459080 | Msa0755590 | 0.848489 | 5.933488e-60 | -8.615850e-47 |
| Msa0459080 | Msa0766880 | 0.814100 | 1.829832e-51 | -8.615850e-47 |
| Msa0459080 | Msa0770020 | 0.824591 | 7.429868e-54 | -8.615850e-47 |
| Msa0459080 | Msa0797240 | 0.842171 | 3.043995e-58 | -8.615850e-47 |
| Msa0459080 | Msa0797810 | 0.806729 | 7.140946e-50 | -8.615850e-47 |
| Msa0459080 | Msa0800400 | 0.807447 | 5.031736e-50 | -8.615850e-47 |
| Msa0459080 | Msa0818950 | 0.829870 | 4.040692e-55 | -8.615850e-47 |
| Msa0459080 | Msa0834160 | 0.803543 | 3.316356e-49 | -8.615850e-47 |
| Msa0459080 | Msa0835010 | 0.843599 | 1.268963e-58 | -8.615850e-47 |
| Msa0459080 | Msa0839730 | 0.811624 | 6.378923e-51 | -8.615850e-47 |
| Msa0459080 | Msa0848780 | 0.817101 | 3.926590e-52 | -8.615850e-47 |
| Msa0459080 | Msa0855490 | 0.806103 | 9.679057e-50 | -8.615850e-47 |
| Msa0459080 | Msa0897390 | 0.814748 | 1.315538e-51 | -8.615850e-47 |
| Msa0459080 | Msa0899080 | 0.818614 | 1.788419e-52 | -8.615850e-47 |
| Msa0459080 | Msa0923910 | 0.800807 | 1.211838e-48 | -8.615850e-47 |
| Msa0459080 | Msa0927890 | 0.834652 | 2.647915e-56 | -8.615850e-47 |
| Msa0459080 | Msa0967250 | 0.813735 | 2.201740e-51 | -8.615850e-47 |
| Msa0459080 | Msa0967260 | 0.825026 | 5.865239e-54 | -8.615850e-47 |
| Msa0459080 | Msa0978000 | 0.806936 | 6.455222e-50 | -8.615850e-47 |
| Msa0459080 | Msa0995660 | 0.822608 | 2.163245e-53 | -8.615850e-47 |
| Msa0459080 | Msa0998940 | 0.814993 | 1.160864e-51 | -8.615850e-47 |
| Msa0459080 | Msa1008960 | 0.817236 | 3.660974e-52 | -8.615850e-47 |
| Msa0459080 | Msa1024580 | 0.822322 | 2.520896e-53 | -8.615850e-47 |
| Msa0459080 | Msa1031220 | 0.830950 | 2.199982e-55 | -8.615850e-47 |
| Msa0459080 | Msa1033670 | 0.807340 | 5.302224e-50 | -8.615850e-47 |
| Msa0459080 | Msa1038420 | 0.829774 | 4.264118e-55 | -8.615850e-47 |
| Msa0459080 | Msa1042380 | 0.801772 | 7.689826e-49 | -8.615850e-47 |
| Msa0459080 | Msa1050320 | 0.806015 | 1.009781e-49 | -8.615850e-47 |
| Msa0459080 | Msa1063180 | 0.806344 | 8.610039e-50 | -8.615850e-47 |
| Msa0459080 | Msa1071310 | 0.800435 | 1.443377e-48 | -8.615850e-47 |
| Msa0459080 | Msa1071460 | 0.825232 | 5.242963e-54 | -8.615850e-47 |
| Msa0459080 | Msa1089130 | 0.805583 | 1.244477e-49 | -8.615850e-47 |
| Msa0459080 | Msa1108530 | 0.825167 | 5.431794e-54 | -8.615850e-47 |
| Msa0459080 | Msa1124440 | 0.814707 | 1.343294e-51 | -8.615850e-47 |
| Msa0459080 | Msa1125150 | 0.802279 | 6.048071e-49 | -8.615850e-47 |
| Msa0459080 | Msa1152280 | 0.819071 | 1.407877e-52 | -8.615850e-47 |
| Msa0459080 | Msa1152500 | 0.851275 | 9.869263e-61 | -8.615850e-47 |
| Msa0459080 | Msa1168130 | 0.805839 | 1.099719e-49 | -8.615850e-47 |
| Msa0459080 | Msa1173410 | 0.832415 | 9.580074e-56 | -8.615850e-47 |
| Msa0459080 | Msa1182950 | 0.824177 | 9.294375e-54 | -8.615850e-47 |
| Msa0459080 | Msa1182960 | 0.820703 | 5.962023e-53 | -8.615850e-47 |
| Msa0459080 | Msa1186010 | 0.814995 | 1.159795e-51 | -8.615850e-47 |
| Msa0459080 | Msa1195860 | 0.833033 | 6.726710e-56 | -8.615850e-47 |
| Msa0459080 | Msa1203840 | 0.823839 | 1.115789e-53 | -8.615850e-47 |
| Msa0459080 | Msa1203860 | 0.827778 | 1.296113e-54 | -8.615850e-47 |
| Msa0459080 | Msa1211280 | 0.812893 | 3.371629e-51 | -8.615850e-47 |
| Msa0459080 | Msa1211370 | 0.832321 | 1.010583e-55 | -8.615850e-47 |
| Msa0459080 | Msa1216700 | 0.841225 | 5.406034e-58 | -8.615850e-47 |
| Msa0459080 | Msa1216900 | 0.824062 | 9.893536e-54 | -8.615850e-47 |
| Msa0459080 | Msa1218720 | 0.813220 | 2.857561e-51 | -8.615850e-47 |
| Msa0459080 | Msa1223510 | 0.815123 | 1.086132e-51 | -8.615850e-47 |
| Msa0459080 | Msa1230190 | 0.805027 | 1.627763e-49 | -8.615850e-47 |
| Msa0459080 | Msa1231520 | 0.812622 | 3.864407e-51 | -8.615850e-47 |
| Msa0459080 | Msa1235050 | 0.805039 | 1.618312e-49 | -8.615850e-47 |
| Msa0459080 | Msa1242990 | 0.803735 | 3.024490e-49 | -8.615850e-47 |
| Msa0459080 | Msa1245300 | 0.801961 | 7.033795e-49 | -8.615850e-47 |
| Msa0459080 | Msa1246420 | 0.835806 | 1.354175e-56 | -8.615850e-47 |
| Msa0459080 | Msa1248400 | 0.829136 | 6.095022e-55 | -8.615850e-47 |
| Msa0459080 | Msa1262740 | 0.827249 | 1.736679e-54 | -8.615850e-47 |
| Msa0459080 | Msa1264230 | 0.827821 | 1.266074e-54 | -8.615850e-47 |
| Msa0459080 | Msa1279320 | 0.801682 | 8.024280e-49 | -8.615850e-47 |
| Msa0459080 | Msa1286660 | 0.828004 | 1.143594e-54 | -8.615850e-47 |
| Msa0459080 | Msa1287160 | 0.802175 | 6.355687e-49 | -8.615850e-47 |
| Msa0459080 | Msa1287340 | 0.817956 | 2.519775e-52 | -8.615850e-47 |
| Msa0459080 | Msa1287640 | 0.813506 | 2.473451e-51 | -8.615850e-47 |
| Msa0459080 | Msa1289340 | 0.836092 | 1.146040e-56 | -8.615850e-47 |
| Msa0459080 | Msa1302780 | 0.816726 | 4.766835e-52 | -8.615850e-47 |
| Msa0459080 | Msa1302920 | 0.849337 | 3.449490e-60 | -8.615850e-47 |
| Msa0459080 | Msa1309910 | 0.832210 | 1.076382e-55 | -8.615850e-47 |
| Msa0459080 | Msa1326900 | 0.840291 | 9.499437e-58 | -8.615850e-47 |
| Msa0459080 | Msa1329660 | 0.831872 | 1.305035e-55 | -8.615850e-47 |
| Msa0459080 | Msa1329820 | 0.834924 | 2.262095e-56 | -8.615850e-47 |
| Msa0459080 | Msa1330910 | 0.805572 | 1.251421e-49 | -8.615850e-47 |
| Msa0459080 | Msa1332180 | 0.810996 | 8.731821e-51 | -8.615850e-47 |
| Msa0459080 | Msa1336350 | 0.811514 | 6.738686e-51 | -8.615850e-47 |
| Msa0459080 | Msa1339310 | 0.805985 | 1.024415e-49 | -8.615850e-47 |
| Msa0459080 | Msa1343540 | 0.829911 | 3.949316e-55 | -8.615850e-47 |
| Msa0459080 | Msa1351560 | 0.839848 | 1.239295e-57 | -8.615850e-47 |
| Msa0459080 | Msa1353280 | 0.804077 | 2.567984e-49 | -8.615850e-47 |
| Msa0459080 | Msa1368660 | 0.816181 | 6.311219e-52 | -8.615850e-47 |
| Msa0459080 | Msa1381720 | 0.822269 | 2.593007e-53 | -8.615850e-47 |
| Msa0459080 | Msa1385940 | 0.836798 | 7.576652e-57 | -8.615850e-47 |
| Msa0459080 | Msa1391600 | 0.803779 | 2.962487e-49 | -8.615850e-47 |
| Msa0459080 | Msa1393600 | 0.817183 | 3.762588e-52 | -8.615850e-47 |
| Msa0459080 | Msa1397550 | 0.806706 | 7.220515e-50 | -8.615850e-47 |
| Msa0459080 | Msa1400600 | 0.817493 | 3.205445e-52 | -8.615850e-47 |
| Msa0459080 | Msa1413220 | 0.803188 | 3.927441e-49 | -8.615850e-47 |
| Msa0459080 | Msa1413880 | 0.835275 | 1.844636e-56 | -8.615850e-47 |
| Msa0459080 | Msa1415120 | 0.810127 | 1.345312e-50 | -8.615850e-47 |
| Msa0459080 | Msa1419040 | 0.822404 | 2.412275e-53 | -8.615850e-47 |
| Msa0459080 | Msa1432250 | 0.804721 | 1.885690e-49 | -8.615850e-47 |
| Msa0459080 | Msa1433380 | 0.840171 | 1.021185e-57 | -8.615850e-47 |
| Msa0459080 | Msa1446220 | 0.820495 | 6.657094e-53 | -8.615850e-47 |
| Msa0459080 | Msa1452200 | 0.832181 | 1.094455e-55 | -8.615850e-47 |
| Msa0459080 | Msa1459630 | 0.818476 | 1.921296e-52 | -8.615850e-47 |
| Msa0240290 | Msa0459080 | 0.808574 | 2.897346e-50 | -8.615850e-47 |
| Msa0240460 | Msa0459080 | 0.812720 | 3.677693e-51 | -8.615850e-47 |
| Msa0244370 | Msa0459080 | 0.827390 | 1.606442e-54 | -8.615850e-47 |
| Msa0256170 | Msa0459080 | 0.827997 | 1.148192e-54 | -8.615850e-47 |
| Msa0270610 | Msa0459080 | 0.818189 | 2.231488e-52 | -8.615850e-47 |
| Msa0278340 | Msa0459080 | 0.803745 | 3.009995e-49 | -8.615850e-47 |
| Msa0282880 | Msa0459080 | 0.832152 | 1.112411e-55 | -8.615850e-47 |
| Msa0288280 | Msa0459080 | 0.809815 | 1.570085e-50 | -8.615850e-47 |
| Msa0298590 | Msa0459080 | 0.813970 | 1.954524e-51 | -8.615850e-47 |
| Msa0317630 | Msa0459080 | 0.834290 | 3.264706e-56 | -8.615850e-47 |
| Msa0321180 | Msa0459080 | 0.828576 | 8.326653e-55 | -8.615850e-47 |
| Msa0321200 | Msa0459080 | 0.831280 | 1.825092e-55 | -8.615850e-47 |
| Msa0358720 | Msa0459080 | 0.801301 | 9.606202e-49 | -8.615850e-47 |
| Msa0364010 | Msa0459080 | 0.810763 | 9.803278e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459080 | MtrunA17_Chr3g0106801 | 85.465 | 516 | 74 | 1 | 1 | 515 | 1 | 516 | 0.0 | 852 |
| Msa0459080 | MtrunA17_Chr3g0106821 | 97.340 | 376 | 10 | 0 | 1 | 376 | 1 | 376 | 0.0 | 738 |
| Msa0459080 | MtrunA17_Chr5g0408921 | 36.572 | 566 | 298 | 12 | 1 | 512 | 1 | 559 | 6.19e-108 | 333 |
| Msa0459080 | MtrunA17_Chr7g0251871 | 35.432 | 556 | 310 | 10 | 1 | 512 | 1 | 551 | 2.78e-104 | 323 |
| Msa0459080 | MtrunA17_Chr8g0369621 | 36.945 | 563 | 302 | 12 | 1 | 513 | 42 | 601 | 1.55e-100 | 315 |
| Msa0459080 | MtrunA17_Chr4g0037301 | 31.429 | 525 | 344 | 7 | 3 | 512 | 11 | 534 | 4.59e-79 | 257 |
| Msa0459080 | MtrunA17_Chr3g0106831 | 95.200 | 125 | 6 | 0 | 391 | 515 | 1 | 125 | 3.67e-72 | 225 |
| Msa0459080 | MtrunA17_Chr5g0405621 | 31.274 | 518 | 336 | 7 | 7 | 512 | 13 | 522 | 2.90e-64 | 218 |
| Msa0459080 | MtrunA17_Chr2g0304561 | 28.807 | 545 | 342 | 11 | 8 | 511 | 13 | 552 | 1.94e-58 | 203 |
| Msa0459080 | MtrunA17_Chr4g0064981 | 28.467 | 548 | 347 | 15 | 8 | 511 | 12 | 558 | 2.07e-53 | 189 |
| Msa0459080 | MtrunA17_Chr7g0225191 | 26.270 | 571 | 348 | 10 | 7 | 512 | 15 | 577 | 1.18e-43 | 163 |
| Msa0459080 | MtrunA17_Chr1g0174101 | 26.727 | 550 | 343 | 11 | 5 | 511 | 22 | 554 | 1.52e-42 | 160 |
| Msa0459080 | MtrunA17_Chr7g0264861 | 26.471 | 544 | 361 | 8 | 5 | 511 | 27 | 568 | 1.80e-39 | 151 |
| Msa0459080 | MtrunA17_Chr1g0171591 | 26.557 | 546 | 358 | 10 | 5 | 511 | 22 | 563 | 2.89e-38 | 147 |
| Msa0459080 | MtrunA17_Chr1g0210291 | 26.753 | 542 | 354 | 11 | 5 | 512 | 23 | 555 | 2.00e-37 | 145 |
| Msa0459080 | MtrunA17_Chr3g0132161 | 23.921 | 556 | 357 | 8 | 7 | 512 | 15 | 554 | 1.17e-36 | 142 |
| Msa0459080 | MtrunA17_Chr2g0330551 | 23.845 | 541 | 369 | 12 | 1 | 511 | 1 | 528 | 1.33e-33 | 134 |
| Msa0459080 | MtrunA17_Chr5g0442481 | 26.038 | 530 | 350 | 9 | 7 | 511 | 11 | 523 | 1.37e-33 | 134 |
| Msa0459080 | MtrunA17_Chr1g0210274 | 25.741 | 540 | 363 | 11 | 5 | 512 | 24 | 557 | 3.88e-33 | 133 |
| Msa0459080 | MtrunA17_Chr1g0210284 | 25.599 | 543 | 360 | 11 | 5 | 512 | 24 | 557 | 4.36e-32 | 130 |
| Msa0459080 | MtrunA17_Chr2g0333371 | 27.165 | 254 | 142 | 5 | 260 | 511 | 76 | 288 | 1.96e-19 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0459080 | AT2G30300.1 | 50.286 | 525 | 224 | 8 | 1 | 514 | 1 | 499 | 3.03e-155 | 452 |
| Msa0459080 | AT5G45275.1 | 38.407 | 565 | 284 | 15 | 1 | 511 | 1 | 555 | 1.79e-111 | 342 |
| Msa0459080 | AT4G19450.1 | 38.938 | 565 | 283 | 14 | 1 | 511 | 1 | 557 | 3.10e-110 | 339 |
| Msa0459080 | AT1G31470.1 | 38.447 | 528 | 294 | 11 | 7 | 511 | 43 | 562 | 8.30e-101 | 315 |
| Msa0459080 | AT3G01630.1 | 36.059 | 538 | 294 | 12 | 7 | 511 | 23 | 543 | 7.74e-96 | 301 |
| Msa0459080 | AT3G01630.2 | 36.059 | 538 | 294 | 12 | 7 | 511 | 41 | 561 | 1.59e-95 | 301 |
| Msa0459080 | AT4G19450.2 | 38.517 | 418 | 205 | 11 | 1 | 373 | 1 | 411 | 5.03e-78 | 251 |
| Msa0459080 | AT4G34950.1 | 29.630 | 540 | 344 | 9 | 6 | 512 | 15 | 551 | 3.13e-71 | 237 |
| Msa0459080 | AT2G16660.1 | 31.227 | 538 | 327 | 9 | 2 | 512 | 9 | 530 | 1.25e-68 | 230 |
| Msa0459080 | AT1G80530.1 | 29.455 | 550 | 334 | 12 | 2 | 511 | 8 | 543 | 3.81e-63 | 216 |
| Msa0459080 | AT2G16660.2 | 31.910 | 398 | 232 | 8 | 2 | 376 | 9 | 390 | 1.96e-46 | 167 |
| Msa0459080 | AT5G50630.1 | 26.960 | 523 | 356 | 9 | 7 | 511 | 16 | 530 | 4.11e-45 | 166 |
| Msa0459080 | AT5G50520.1 | 26.960 | 523 | 356 | 9 | 7 | 511 | 16 | 530 | 4.11e-45 | 166 |
| Msa0459080 | AT2G28120.1 | 26.316 | 532 | 363 | 8 | 7 | 511 | 17 | 546 | 3.17e-44 | 164 |
| Msa0459080 | AT2G39210.1 | 25.946 | 555 | 360 | 11 | 1 | 512 | 10 | 556 | 1.35e-41 | 157 |
| Msa0459080 | AT5G14120.1 | 25.448 | 558 | 364 | 10 | 7 | 513 | 16 | 572 | 5.88e-41 | 155 |
| Msa0459080 | AT3G01930.2 | 25.577 | 563 | 360 | 10 | 7 | 512 | 16 | 576 | 1.70e-39 | 151 |
| Msa0459080 | AT1G74780.1 | 26.642 | 533 | 346 | 12 | 7 | 511 | 7 | 522 | 7.04e-39 | 149 |
| Msa0459080 | AT2G34355.1 | 25.607 | 535 | 340 | 12 | 7 | 511 | 7 | 513 | 3.97e-36 | 141 |
| Msa0459080 | AT1G18940.1 | 24.953 | 533 | 346 | 11 | 7 | 511 | 9 | 515 | 8.49e-35 | 137 |
| Msa0459080 | AT2G34350.1 | 23.897 | 544 | 354 | 10 | 1 | 512 | 1 | 516 | 1.25e-33 | 134 |
| Msa0459080 | AT2G34350.2 | 23.897 | 544 | 354 | 10 | 1 | 512 | 1 | 516 | 1.25e-33 | 134 |
| Msa0459080 | AT3G01930.3 | 25.679 | 405 | 254 | 8 | 7 | 366 | 16 | 418 | 9.89e-25 | 107 |
| Msa0459080 | AT2G34355.2 | 24.548 | 387 | 246 | 10 | 145 | 511 | 3 | 363 | 3.11e-20 | 92.8 |
| Msa0459080 | AT3G01930.1 | 24.190 | 463 | 292 | 10 | 107 | 512 | 3 | 463 | 9.04e-20 | 92.4 |
Find 99 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGATCTTCACAGAAAT+TGG | 0.137377 | 3_3:-55416420 | None:intergenic |
| ATAGTAAAACCTTTATTATT+TGG | 0.140576 | 3_3:+55417826 | Msa0459080:CDS |
| ATTTGTGTTTGTTCCATTTA+TGG | 0.143254 | 3_3:-55415731 | None:intergenic |
| TGTTGAGAAGAATAAATTTC+TGG | 0.186844 | 3_3:+55416607 | Msa0459080:CDS |
| GTGTCTTTGTCTTCTGCTTT+TGG | 0.192683 | 3_3:+55416735 | Msa0459080:CDS |
| TCCTCACTTGGTGTGCTTAT+TGG | 0.193854 | 3_3:+55416363 | Msa0459080:CDS |
| TTTGGTGTTTCTTAACAATT+TGG | 0.204315 | 3_3:+55416668 | Msa0459080:CDS |
| CTCATCATCGGTTCGTTTCT+CGG | 0.208698 | 3_3:+55415898 | Msa0459080:CDS |
| TTGTTGCCTTGGAACTTTAT+TGG | 0.215677 | 3_3:+55417857 | Msa0459080:CDS |
| TAGTAAAACCTTTATTATTT+GGG | 0.229897 | 3_3:+55417827 | Msa0459080:CDS |
| TAAGCCTAGTTGGCATAATT+TGG | 0.232278 | 3_3:+55415701 | Msa0459080:CDS |
| CTGCTATTTACCTTCCCTTA+TGG | 0.234899 | 3_3:+55415869 | Msa0459080:CDS |
| AATATGACATAGAAGAAATT+TGG | 0.235115 | 3_3:-55415960 | None:intergenic |
| TCCAAAACAACTGAGCTATT+TGG | 0.240789 | 3_3:+55417666 | Msa0459080:CDS |
| TACATAAGCACTGCAGTAAT+TGG | 0.247602 | 3_3:+55417609 | Msa0459080:CDS |
| GCCAAATAGCTCAGTTGTTT+TGG | 0.252607 | 3_3:-55417667 | None:intergenic |
| AAACAAACACTAGAATGTTT+AGG | 0.266198 | 3_3:-55416261 | None:intergenic |
| ATTGGTGTTATGGAAGAAAT+TGG | 0.266375 | 3_3:+55416573 | Msa0459080:CDS |
| ATTTGGCTCCAAGCCATAAA+TGG | 0.278786 | 3_3:+55415718 | Msa0459080:CDS |
| AACAAACACTAGAATGTTTA+GGG | 0.279536 | 3_3:-55416260 | None:intergenic |
| ACGTCTCATTCCATCTCTTT+TGG | 0.289040 | 3_3:+55416767 | Msa0459080:CDS |
| TTCTTATTAACTTTCCTTGC+TGG | 0.290781 | 3_3:+55415991 | Msa0459080:CDS |
| TTGTTCTGCTACTTCATCTT+TGG | 0.300132 | 3_3:+55416713 | Msa0459080:CDS |
| AAATTTCTTCTATGTCATAT+TGG | 0.331796 | 3_3:+55415962 | Msa0459080:CDS |
| AATTCAAGAGATTGGTGTTA+TGG | 0.341430 | 3_3:+55416563 | Msa0459080:CDS |
| TTTCTCGGACTAATCGGTTA+TGG | 0.348039 | 3_3:+55415913 | Msa0459080:CDS |
| TTGCTGGGAATAGCATTTGT+TGG | 0.369362 | 3_3:+55416007 | Msa0459080:CDS |
| AGAAATAAAAGCAACAATAT+TGG | 0.377396 | 3_3:-55416136 | None:intergenic |
| TCTTATTAACTTTCCTTGCT+GGG | 0.386250 | 3_3:+55415992 | Msa0459080:CDS |
| TTGGTGTTTCTTAACAATTT+GGG | 0.387056 | 3_3:+55416669 | Msa0459080:CDS |
| TTTGTTATTACAATTGCAAC+TGG | 0.387762 | 3_3:+55416294 | Msa0459080:CDS |
| GGTTCGTTTCTCGGACTAAT+CGG | 0.394038 | 3_3:+55415907 | Msa0459080:CDS |
| TACTGCAGTGCTTATGTAAA+GGG | 0.396066 | 3_3:-55417604 | None:intergenic |
| TGGAAAGAAGTTGTTTCAGC+TGG | 0.401946 | 3_3:-55415771 | None:intergenic |
| AACTAAAACTTCTAAACTCT+TGG | 0.405485 | 3_3:-55415636 | None:intergenic |
| AAAGGAACCCCAAATAATAA+AGG | 0.406648 | 3_3:-55417835 | None:intergenic |
| ATTGAGCTCTACTTGTGAAA+TGG | 0.417219 | 3_3:-55415791 | None:intergenic |
| TCTTGATCTTCACAGAAATT+GGG | 0.421798 | 3_3:-55416419 | None:intergenic |
| AGTTGTGAAATTCAAGAGAT+TGG | 0.423500 | 3_3:+55416555 | Msa0459080:CDS |
| TATTCTCCTCCATGGTGAAA+TGG | 0.428451 | 3_3:-55416488 | None:intergenic |
| GCAGTAATTGGAGTTTCTAC+TGG | 0.428724 | 3_3:+55417621 | Msa0459080:CDS |
| AGCTGAGTAACCAAACAAAA+AGG | 0.441737 | 3_3:-55417745 | None:intergenic |
| GATAGAGAATGAAGTAAAAG+AGG | 0.442101 | 3_3:+55416524 | Msa0459080:CDS |
| TGTTTGTTCCATTTATGGCT+TGG | 0.449184 | 3_3:-55415726 | None:intergenic |
| GGATTAACAACTAGTTATCA+AGG | 0.460309 | 3_3:+55416093 | Msa0459080:CDS |
| CTTCAATGGCTAAGCCTAGT+TGG | 0.461205 | 3_3:+55415691 | Msa0459080:CDS |
| ACTATTATACCAACTACAAC+AGG | 0.461689 | 3_3:-55416204 | None:intergenic |
| TGTCTTCTTCTACTCTTCAA+TGG | 0.465890 | 3_3:+55415677 | Msa0459080:CDS |
| AAGAAGAATGCAAATGTTGT+TGG | 0.467873 | 3_3:-55417558 | None:intergenic |
| TTCGATCGGCAAGTTGCCGT+TGG | 0.472775 | 3_3:+55416072 | Msa0459080:CDS |
| TCAAGAAACTATTAGAATCA+TGG | 0.476166 | 3_3:+55416436 | Msa0459080:CDS |
| TGCCACTATAGTAGCAGTTA+TGG | 0.477489 | 3_3:+55417533 | Msa0459080:CDS |
| TTCACTATTATTCTCCTCCA+TGG | 0.479663 | 3_3:-55416496 | None:intergenic |
| GATGATGAGGACGAGCCATA+AGG | 0.498276 | 3_3:-55415884 | None:intergenic |
| TAAAGTTCCAAGGCAACAAA+AGG | 0.499408 | 3_3:-55417853 | None:intergenic |
| TCTCTTGTACCTGTTGTAGT+TGG | 0.504035 | 3_3:+55416195 | Msa0459080:CDS |
| GCACTTATTTACCGTGGTGA+AGG | 0.504829 | 3_3:+55417768 | Msa0459080:CDS |
| TTACTGCAGTGCTTATGTAA+AGG | 0.505843 | 3_3:-55417605 | None:intergenic |
| ATGATGAGGACGAGCCATAA+GGG | 0.513583 | 3_3:-55415883 | None:intergenic |
| ACAGAAATTGGGAGTAAAAG+AGG | 0.514863 | 3_3:-55416408 | None:intergenic |
| CGTGGTGAAGGGAATGAACA+TGG | 0.521353 | 3_3:+55417780 | Msa0459080:CDS |
| TACGAAACTTTATATTCGAT+CGG | 0.522301 | 3_3:+55416058 | Msa0459080:CDS |
| TTATGGCTCGTCCTCATCAT+CGG | 0.523831 | 3_3:+55415886 | Msa0459080:CDS |
| TTCAGCTGGGAAGAGTAAGC+AGG | 0.524243 | 3_3:-55415757 | None:intergenic |
| CACTTATTTACCGTGGTGAA+GGG | 0.524996 | 3_3:+55417769 | Msa0459080:CDS |
| TGACATAGAAGAAATTTGGT+TGG | 0.527278 | 3_3:-55415956 | None:intergenic |
| ATAGAGAATGAAGTAAAAGA+GGG | 0.528255 | 3_3:+55416525 | Msa0459080:CDS |
| GGAGCCAAATTATGCCAACT+AGG | 0.536045 | 3_3:-55415705 | None:intergenic |
| TGTAAATCATAATGTAGTTG+TGG | 0.538384 | 3_3:+55417704 | Msa0459080:CDS |
| TGCCATAACTGCTACTATAG+TGG | 0.544260 | 3_3:-55417535 | None:intergenic |
| GTTGTGGCAAATATTCCAAT+GGG | 0.544685 | 3_3:+55417720 | Msa0459080:CDS |
| GGAAAGAAGTTGTTTCAGCT+GGG | 0.546217 | 3_3:-55415770 | None:intergenic |
| ACCAATAAGCACACCAAGTG+AGG | 0.550160 | 3_3:-55416364 | None:intergenic |
| TAGAAGTAGTCCAAAAGAGA+TGG | 0.550728 | 3_3:-55416777 | None:intergenic |
| AGTAAAACCTTTATTATTTG+GGG | 0.551405 | 3_3:+55417828 | Msa0459080:CDS |
| ATCGAATATAAAGTTTCGTA+TGG | 0.555333 | 3_3:-55416055 | None:intergenic |
| ATAACTAGTTGTTAATCCAA+CGG | 0.572986 | 3_3:-55416088 | None:intergenic |
| AGTTGTGGCAAATATTCCAA+TGG | 0.576400 | 3_3:+55417719 | Msa0459080:CDS |
| ATAACTGCTACTATAGTGGC+AGG | 0.578194 | 3_3:-55417531 | None:intergenic |
| GAATGAACATGGGAAATGCA+TGG | 0.579212 | 3_3:+55417791 | Msa0459080:CDS |
| ACTTTAATTTCTCTTACTAG+AGG | 0.582711 | 3_3:-55416231 | None:intergenic |
| AATGAACATGGGAAATGCAT+GGG | 0.586706 | 3_3:+55417792 | Msa0459080:CDS |
| ACAAACAAAATATCCTCACT+TGG | 0.588126 | 3_3:+55416351 | Msa0459080:CDS |
| AGGAGAATAATAGTGAAGAG+AGG | 0.590123 | 3_3:+55416502 | Msa0459080:CDS |
| TCAAAGCCAATAAAGTTCCA+AGG | 0.602396 | 3_3:-55417863 | None:intergenic |
| AACAAATGCTATTCCCAGCA+AGG | 0.604864 | 3_3:-55416005 | None:intergenic |
| ACATGGGAAATGCATGGGCA+TGG | 0.611694 | 3_3:+55417797 | Msa0459080:CDS |
| CGAGAAACGAACCGATGATG+AGG | 0.622288 | 3_3:-55415897 | None:intergenic |
| GGACAAATAGCTGAATCAAG+AGG | 0.624039 | 3_3:+55416690 | Msa0459080:CDS |
| TCAGCTGGGAAGAGTAAGCA+GGG | 0.627009 | 3_3:-55415756 | None:intergenic |
| CAGTGCTTATGTAAAGGGCA+AGG | 0.629081 | 3_3:-55417599 | None:intergenic |
| TGAGGACGAGCCATAAGGGA+AGG | 0.653772 | 3_3:-55415879 | None:intergenic |
| CAGCATCAGATGCAAAAGCA+AGG | 0.659722 | 3_3:-55415816 | None:intergenic |
| CATGTTCATTCCCTTCACCA+CGG | 0.670222 | 3_3:-55417779 | None:intergenic |
| TCAGCTGCACTTATTTACCG+TGG | 0.674454 | 3_3:+55417762 | Msa0459080:CDS |
| AGGGAAGGTAAATAGCAGCA+AGG | 0.681261 | 3_3:-55415864 | None:intergenic |
| GTGGTGAAGGGAATGAACAT+GGG | 0.684893 | 3_3:+55417781 | Msa0459080:CDS |
| AATCTACCATTTCACCATGG+AGG | 0.703159 | 3_3:+55416482 | Msa0459080:CDS |
| AAGAATCTACCATTTCACCA+TGG | 0.716797 | 3_3:+55416479 | Msa0459080:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATAATAATTTTAACTTC+AGG | + | chr3_3:55417487-55417506 | Msa0459080:intron | 10.0% |
| !!! | TAATAATAATTTTAACTTCA+GGG | + | chr3_3:55417488-55417507 | Msa0459080:intron | 10.0% |
| !!! | TTAATAATAATTTTAACTTC+AGG | + | chr3_3:55417487-55417506 | Msa0459080:intron | 10.0% |
| !!! | TAATAATAATTTTAACTTCA+GGG | + | chr3_3:55417488-55417507 | Msa0459080:intron | 10.0% |
| !!! | TATTTCTTTGTGTATTTTTT+TGG | + | chr3_3:55416633-55416652 | Msa0459080:CDS | 15.0% |
| !! | AATATAAATAAAGAATCATG+TGG | - | chr3_3:55416838-55416857 | None:intergenic | 15.0% |
| !! | AAATTGTAAAAATTTAGTGT+CGG | - | chr3_3:55417001-55417020 | None:intergenic | 15.0% |
| !! | AAAAATTGTCTTGAAAATAT+AGG | - | chr3_3:55417192-55417211 | None:intergenic | 15.0% |
| !!! | AATAATAATTTTAACTTCAG+GGG | + | chr3_3:55417489-55417508 | Msa0459080:intron | 15.0% |
| !! | ATAGTAAAACCTTTATTATT+TGG | + | chr3_3:55417826-55417845 | Msa0459080:CDS | 15.0% |
| !! | TAGTAAAACCTTTATTATTT+GGG | + | chr3_3:55417827-55417846 | Msa0459080:CDS | 15.0% |
| !!! | TTTTACTCATATAAACAATA+GGG | + | chr3_3:55417909-55417928 | Msa0459080:CDS | 15.0% |
| !!! | TATTTCTTTGTGTATTTTTT+TGG | + | chr3_3:55416633-55416652 | Msa0459080:CDS | 15.0% |
| !! | AATATAAATAAAGAATCATG+TGG | - | chr3_3:55416838-55416857 | None:intergenic | 15.0% |
| !! | AAATTGTAAAAATTTAGTGT+CGG | - | chr3_3:55417001-55417020 | None:intergenic | 15.0% |
| !! | AAAAATTGTCTTGAAAATAT+AGG | - | chr3_3:55417192-55417211 | None:intergenic | 15.0% |
| !!! | AATAATAATTTTAACTTCAG+GGG | + | chr3_3:55417489-55417508 | Msa0459080:intron | 15.0% |
| !! | ATAGTAAAACCTTTATTATT+TGG | + | chr3_3:55417826-55417845 | Msa0459080:CDS | 15.0% |
| !! | TAGTAAAACCTTTATTATTT+GGG | + | chr3_3:55417827-55417846 | Msa0459080:CDS | 15.0% |
| !!! | TTTTACTCATATAAACAATA+GGG | + | chr3_3:55417909-55417928 | Msa0459080:CDS | 15.0% |
| !! | AATATGACATAGAAGAAATT+TGG | - | chr3_3:55415963-55415982 | None:intergenic | 20.0% |
| !! | AAATTTCTTCTATGTCATAT+TGG | + | chr3_3:55415962-55415981 | Msa0459080:CDS | 20.0% |
| !! | AGAAATAAAAGCAACAATAT+TGG | - | chr3_3:55416139-55416158 | None:intergenic | 20.0% |
| !! | CAAAATATTGACACTATATA+CGG | - | chr3_3:55417038-55417057 | None:intergenic | 20.0% |
| !!! | AATATCACTGCATTTTTTAA+AGG | + | chr3_3:55417064-55417083 | Msa0459080:intron | 20.0% |
| !! | GAAAATTCTTTATAGAAAGA+CGG | + | chr3_3:55417137-55417156 | Msa0459080:intron | 20.0% |
| !!! | TTCAAGACAATTTTTATTTG+AGG | + | chr3_3:55417197-55417216 | Msa0459080:intron | 20.0% |
| !!! | GTTATGCTACATTTTAAAAA+GGG | - | chr3_3:55417259-55417278 | None:intergenic | 20.0% |
| !!! | TGTTATGCTACATTTTAAAA+AGG | - | chr3_3:55417260-55417279 | None:intergenic | 20.0% |
| !! | ATTTAATGCAATAATGACAA+TGG | + | chr3_3:55417309-55417328 | Msa0459080:intron | 20.0% |
| !! | AGTAAAACCTTTATTATTTG+GGG | + | chr3_3:55417828-55417847 | Msa0459080:CDS | 20.0% |
| !!! | GTTTTACTCATATAAACAAT+AGG | + | chr3_3:55417908-55417927 | Msa0459080:CDS | 20.0% |
| !! | AATATGACATAGAAGAAATT+TGG | - | chr3_3:55415963-55415982 | None:intergenic | 20.0% |
| !! | AAATTTCTTCTATGTCATAT+TGG | + | chr3_3:55415962-55415981 | Msa0459080:CDS | 20.0% |
| !! | AGAAATAAAAGCAACAATAT+TGG | - | chr3_3:55416139-55416158 | None:intergenic | 20.0% |
| !! | CAAAATATTGACACTATATA+CGG | - | chr3_3:55417038-55417057 | None:intergenic | 20.0% |
| !!! | AATATCACTGCATTTTTTAA+AGG | + | chr3_3:55417064-55417083 | Msa0459080:intron | 20.0% |
| !! | GAAAATTCTTTATAGAAAGA+CGG | + | chr3_3:55417137-55417156 | Msa0459080:intron | 20.0% |
| !!! | TTCAAGACAATTTTTATTTG+AGG | + | chr3_3:55417197-55417216 | Msa0459080:intron | 20.0% |
| !!! | GTTATGCTACATTTTAAAAA+GGG | - | chr3_3:55417259-55417278 | None:intergenic | 20.0% |
| !!! | TGTTATGCTACATTTTAAAA+AGG | - | chr3_3:55417260-55417279 | None:intergenic | 20.0% |
| !! | ATTTAATGCAATAATGACAA+TGG | + | chr3_3:55417309-55417328 | Msa0459080:intron | 20.0% |
| !! | AGTAAAACCTTTATTATTTG+GGG | + | chr3_3:55417828-55417847 | Msa0459080:CDS | 20.0% |
| !!! | GTTTTACTCATATAAACAAT+AGG | + | chr3_3:55417908-55417927 | Msa0459080:CDS | 20.0% |
| ! | ATTTGTGTTTGTTCCATTTA+TGG | - | chr3_3:55415734-55415753 | None:intergenic | 25.0% |
| ! | ATCGAATATAAAGTTTCGTA+TGG | - | chr3_3:55416058-55416077 | None:intergenic | 25.0% |
| ! | TACGAAACTTTATATTCGAT+CGG | + | chr3_3:55416058-55416077 | Msa0459080:CDS | 25.0% |
| ! | ATAACTAGTTGTTAATCCAA+CGG | - | chr3_3:55416091-55416110 | None:intergenic | 25.0% |
| !!! | AATGTCTCAGCTTTTTTATT+TGG | - | chr3_3:55416162-55416181 | None:intergenic | 25.0% |
| !! | ACTTTAATTTCTCTTACTAG+AGG | - | chr3_3:55416234-55416253 | None:intergenic | 25.0% |
| ! | AACAAACACTAGAATGTTTA+GGG | - | chr3_3:55416263-55416282 | None:intergenic | 25.0% |
| ! | AAACAAACACTAGAATGTTT+AGG | - | chr3_3:55416264-55416283 | None:intergenic | 25.0% |
| !!! | TTTGTTATTACAATTGCAAC+TGG | + | chr3_3:55416294-55416313 | Msa0459080:CDS | 25.0% |
| ! | TCAAGAAACTATTAGAATCA+TGG | + | chr3_3:55416436-55416455 | Msa0459080:CDS | 25.0% |
| ! | ATAGAGAATGAAGTAAAAGA+GGG | + | chr3_3:55416525-55416544 | Msa0459080:CDS | 25.0% |
| ! | TGTTGAGAAGAATAAATTTC+TGG | + | chr3_3:55416607-55416626 | Msa0459080:CDS | 25.0% |
| !!! | TATTTTTTTGGTGCAACTAT+TGG | + | chr3_3:55416645-55416664 | Msa0459080:CDS | 25.0% |
| !!! | TTTGGTGTTTCTTAACAATT+TGG | + | chr3_3:55416668-55416687 | Msa0459080:CDS | 25.0% |
| !! | TTGGTGTTTCTTAACAATTT+GGG | + | chr3_3:55416669-55416688 | Msa0459080:CDS | 25.0% |
| ! | ACTCTAATGCAACTAATTTA+TGG | + | chr3_3:55416885-55416904 | Msa0459080:intron | 25.0% |
| ! | GGTTATTAAGCAACAAAATT+AGG | + | chr3_3:55417115-55417134 | Msa0459080:intron | 25.0% |
| !!! | ATAAATGCCATGATTTTAGT+TGG | - | chr3_3:55417283-55417302 | None:intergenic | 25.0% |
| !!! | GAAGAGGCTTTTAATTTTTT+TGG | - | chr3_3:55417372-55417391 | None:intergenic | 25.0% |
| ! | GCTAGTAACATTGAAAATAT+AGG | - | chr3_3:55417444-55417463 | None:intergenic | 25.0% |
| ! | TGTAAATCATAATGTAGTTG+TGG | + | chr3_3:55417704-55417723 | Msa0459080:CDS | 25.0% |
| !!! | TGGCTTTGATTCTATATTTT+AGG | + | chr3_3:55417877-55417896 | Msa0459080:CDS | 25.0% |
| ! | ATTTGTGTTTGTTCCATTTA+TGG | - | chr3_3:55415734-55415753 | None:intergenic | 25.0% |
| ! | ATCGAATATAAAGTTTCGTA+TGG | - | chr3_3:55416058-55416077 | None:intergenic | 25.0% |
| ! | TACGAAACTTTATATTCGAT+CGG | + | chr3_3:55416058-55416077 | Msa0459080:CDS | 25.0% |
| ! | ATAACTAGTTGTTAATCCAA+CGG | - | chr3_3:55416091-55416110 | None:intergenic | 25.0% |
| !!! | AATGTCTCAGCTTTTTTATT+TGG | - | chr3_3:55416162-55416181 | None:intergenic | 25.0% |
| !! | ACTTTAATTTCTCTTACTAG+AGG | - | chr3_3:55416234-55416253 | None:intergenic | 25.0% |
| ! | AACAAACACTAGAATGTTTA+GGG | - | chr3_3:55416263-55416282 | None:intergenic | 25.0% |
| ! | AAACAAACACTAGAATGTTT+AGG | - | chr3_3:55416264-55416283 | None:intergenic | 25.0% |
| !!! | TTTGTTATTACAATTGCAAC+TGG | + | chr3_3:55416294-55416313 | Msa0459080:CDS | 25.0% |
| ! | TCAAGAAACTATTAGAATCA+TGG | + | chr3_3:55416436-55416455 | Msa0459080:CDS | 25.0% |
| ! | ATAGAGAATGAAGTAAAAGA+GGG | + | chr3_3:55416525-55416544 | Msa0459080:CDS | 25.0% |
| ! | TGTTGAGAAGAATAAATTTC+TGG | + | chr3_3:55416607-55416626 | Msa0459080:CDS | 25.0% |
| !!! | TATTTTTTTGGTGCAACTAT+TGG | + | chr3_3:55416645-55416664 | Msa0459080:CDS | 25.0% |
| !!! | TTTGGTGTTTCTTAACAATT+TGG | + | chr3_3:55416668-55416687 | Msa0459080:CDS | 25.0% |
| !! | TTGGTGTTTCTTAACAATTT+GGG | + | chr3_3:55416669-55416688 | Msa0459080:CDS | 25.0% |
| ! | ACTCTAATGCAACTAATTTA+TGG | + | chr3_3:55416885-55416904 | Msa0459080:intron | 25.0% |
| ! | GGTTATTAAGCAACAAAATT+AGG | + | chr3_3:55417115-55417134 | Msa0459080:intron | 25.0% |
| !!! | ATAAATGCCATGATTTTAGT+TGG | - | chr3_3:55417283-55417302 | None:intergenic | 25.0% |
| !!! | GAAGAGGCTTTTAATTTTTT+TGG | - | chr3_3:55417372-55417391 | None:intergenic | 25.0% |
| ! | GCTAGTAACATTGAAAATAT+AGG | - | chr3_3:55417444-55417463 | None:intergenic | 25.0% |
| ! | TGTAAATCATAATGTAGTTG+TGG | + | chr3_3:55417704-55417723 | Msa0459080:CDS | 25.0% |
| !!! | TGGCTTTGATTCTATATTTT+AGG | + | chr3_3:55417877-55417896 | Msa0459080:CDS | 25.0% |
| !!! | AAACTTTTTGGTTGGTTTTC+TGG | + | chr3_3:55415841-55415860 | Msa0459080:CDS | 30.0% |
| TGACATAGAAGAAATTTGGT+TGG | - | chr3_3:55415959-55415978 | None:intergenic | 30.0% | |
| TTCTTATTAACTTTCCTTGC+TGG | + | chr3_3:55415991-55416010 | Msa0459080:CDS | 30.0% | |
| TCTTATTAACTTTCCTTGCT+GGG | + | chr3_3:55415992-55416011 | Msa0459080:CDS | 30.0% | |
| GGATTAACAACTAGTTATCA+AGG | + | chr3_3:55416093-55416112 | Msa0459080:CDS | 30.0% | |
| ACTATTATACCAACTACAAC+AGG | - | chr3_3:55416207-55416226 | None:intergenic | 30.0% | |
| ACAAACAAAATATCCTCACT+TGG | + | chr3_3:55416351-55416370 | Msa0459080:CDS | 30.0% | |
| TCTTGATCTTCACAGAAATT+GGG | - | chr3_3:55416422-55416441 | None:intergenic | 30.0% | |
| TTCTTGATCTTCACAGAAAT+TGG | - | chr3_3:55416423-55416442 | None:intergenic | 30.0% | |
| GATAGAGAATGAAGTAAAAG+AGG | + | chr3_3:55416524-55416543 | Msa0459080:CDS | 30.0% | |
| AGTTGTGAAATTCAAGAGAT+TGG | + | chr3_3:55416555-55416574 | Msa0459080:CDS | 30.0% | |
| !! | AATTCAAGAGATTGGTGTTA+TGG | + | chr3_3:55416563-55416582 | Msa0459080:CDS | 30.0% |
| !! | ATTGGTGTTATGGAAGAAAT+TGG | + | chr3_3:55416573-55416592 | Msa0459080:CDS | 30.0% |
| !! | TCTTCTGCTTTTGGATTTTT+TGG | + | chr3_3:55416744-55416763 | Msa0459080:CDS | 30.0% |
| GACTACTTCTATAGGTAATA+TGG | + | chr3_3:55416789-55416808 | Msa0459080:intron | 30.0% | |
| ! | GAAAATTTTCGTTGCAGTTT+AGG | - | chr3_3:55416944-55416963 | None:intergenic | 30.0% |
| TTTAAAAAGGGTCTCACTAA+CGG | - | chr3_3:55417247-55417266 | None:intergenic | 30.0% | |
| CATAACACCAACTAAAATCA+TGG | + | chr3_3:55417273-55417292 | Msa0459080:intron | 30.0% | |
| ! | AATAATGACAATGGTGATGT+TGG | + | chr3_3:55417318-55417337 | Msa0459080:intron | 30.0% |
| AAGAAGAATGCAAATGTTGT+TGG | - | chr3_3:55417561-55417580 | None:intergenic | 30.0% | |
| AAAGGAACCCCAAATAATAA+AGG | - | chr3_3:55417838-55417857 | None:intergenic | 30.0% | |
| !!! | AAACTTTTTGGTTGGTTTTC+TGG | + | chr3_3:55415841-55415860 | Msa0459080:CDS | 30.0% |
| TGACATAGAAGAAATTTGGT+TGG | - | chr3_3:55415959-55415978 | None:intergenic | 30.0% | |
| TTCTTATTAACTTTCCTTGC+TGG | + | chr3_3:55415991-55416010 | Msa0459080:CDS | 30.0% | |
| TCTTATTAACTTTCCTTGCT+GGG | + | chr3_3:55415992-55416011 | Msa0459080:CDS | 30.0% | |
| GGATTAACAACTAGTTATCA+AGG | + | chr3_3:55416093-55416112 | Msa0459080:CDS | 30.0% | |
| ACTATTATACCAACTACAAC+AGG | - | chr3_3:55416207-55416226 | None:intergenic | 30.0% | |
| ACAAACAAAATATCCTCACT+TGG | + | chr3_3:55416351-55416370 | Msa0459080:CDS | 30.0% | |
| TCTTGATCTTCACAGAAATT+GGG | - | chr3_3:55416422-55416441 | None:intergenic | 30.0% | |
| TTCTTGATCTTCACAGAAAT+TGG | - | chr3_3:55416423-55416442 | None:intergenic | 30.0% | |
| GATAGAGAATGAAGTAAAAG+AGG | + | chr3_3:55416524-55416543 | Msa0459080:CDS | 30.0% | |
| AGTTGTGAAATTCAAGAGAT+TGG | + | chr3_3:55416555-55416574 | Msa0459080:CDS | 30.0% | |
| !! | AATTCAAGAGATTGGTGTTA+TGG | + | chr3_3:55416563-55416582 | Msa0459080:CDS | 30.0% |
| !! | ATTGGTGTTATGGAAGAAAT+TGG | + | chr3_3:55416573-55416592 | Msa0459080:CDS | 30.0% |
| !! | TCTTCTGCTTTTGGATTTTT+TGG | + | chr3_3:55416744-55416763 | Msa0459080:CDS | 30.0% |
| GACTACTTCTATAGGTAATA+TGG | + | chr3_3:55416789-55416808 | Msa0459080:intron | 30.0% | |
| ! | GAAAATTTTCGTTGCAGTTT+AGG | - | chr3_3:55416944-55416963 | None:intergenic | 30.0% |
| TTTAAAAAGGGTCTCACTAA+CGG | - | chr3_3:55417247-55417266 | None:intergenic | 30.0% | |
| CATAACACCAACTAAAATCA+TGG | + | chr3_3:55417273-55417292 | Msa0459080:intron | 30.0% | |
| ! | AATAATGACAATGGTGATGT+TGG | + | chr3_3:55417318-55417337 | Msa0459080:intron | 30.0% |
| AAGAAGAATGCAAATGTTGT+TGG | - | chr3_3:55417561-55417580 | None:intergenic | 30.0% | |
| AAAGGAACCCCAAATAATAA+AGG | - | chr3_3:55417838-55417857 | None:intergenic | 30.0% | |
| TGTCTTCTTCTACTCTTCAA+TGG | + | chr3_3:55415677-55415696 | Msa0459080:CDS | 35.0% | |
| TAAGCCTAGTTGGCATAATT+TGG | + | chr3_3:55415701-55415720 | Msa0459080:CDS | 35.0% | |
| TGTTTGTTCCATTTATGGCT+TGG | - | chr3_3:55415729-55415748 | None:intergenic | 35.0% | |
| ATTGAGCTCTACTTGTGAAA+TGG | - | chr3_3:55415794-55415813 | None:intergenic | 35.0% | |
| ACAGAAATTGGGAGTAAAAG+AGG | - | chr3_3:55416411-55416430 | None:intergenic | 35.0% | |
| CATGGCATAAAAAGAGAGAA+AGG | + | chr3_3:55416454-55416473 | Msa0459080:CDS | 35.0% | |
| AAGAATCTACCATTTCACCA+TGG | + | chr3_3:55416479-55416498 | Msa0459080:CDS | 35.0% | |
| TTCACTATTATTCTCCTCCA+TGG | - | chr3_3:55416499-55416518 | None:intergenic | 35.0% | |
| AGGAGAATAATAGTGAAGAG+AGG | + | chr3_3:55416502-55416521 | Msa0459080:CDS | 35.0% | |
| !! | TTTTGGTGCAACTATTGGTT+TGG | + | chr3_3:55416650-55416669 | Msa0459080:CDS | 35.0% |
| ! | TTGTTCTGCTACTTCATCTT+TGG | + | chr3_3:55416713-55416732 | Msa0459080:CDS | 35.0% |
| TAGAAGTAGTCCAAAAGAGA+TGG | - | chr3_3:55416780-55416799 | None:intergenic | 35.0% | |
| ! | CTCTTTTGGACTACTTCTAT+AGG | + | chr3_3:55416781-55416800 | Msa0459080:CDS | 35.0% |
| ATTCCTTAACTAGTGCTTCT+GGG | + | chr3_3:55417220-55417239 | Msa0459080:intron | 35.0% | |
| TACTGCAGTGCTTATGTAAA+GGG | - | chr3_3:55417607-55417626 | None:intergenic | 35.0% | |
| TTACTGCAGTGCTTATGTAA+AGG | - | chr3_3:55417608-55417627 | None:intergenic | 35.0% | |
| ! | TACATAAGCACTGCAGTAAT+TGG | + | chr3_3:55417609-55417628 | Msa0459080:CDS | 35.0% |
| !!! | AGTTGTTTTGGAAATAGCAG+TGG | - | chr3_3:55417658-55417677 | None:intergenic | 35.0% |
| TCCAAAACAACTGAGCTATT+TGG | + | chr3_3:55417666-55417685 | Msa0459080:CDS | 35.0% | |
| AGTTGTGGCAAATATTCCAA+TGG | + | chr3_3:55417719-55417738 | Msa0459080:CDS | 35.0% | |
| GTTGTGGCAAATATTCCAAT+GGG | + | chr3_3:55417720-55417739 | Msa0459080:CDS | 35.0% | |
| AGCTGAGTAACCAAACAAAA+AGG | - | chr3_3:55417748-55417767 | None:intergenic | 35.0% | |
| AATGAACATGGGAAATGCAT+GGG | + | chr3_3:55417792-55417811 | Msa0459080:CDS | 35.0% | |
| TAAAGTTCCAAGGCAACAAA+AGG | - | chr3_3:55417856-55417875 | None:intergenic | 35.0% | |
| TTGTTGCCTTGGAACTTTAT+TGG | + | chr3_3:55417857-55417876 | Msa0459080:CDS | 35.0% | |
| TCAAAGCCAATAAAGTTCCA+AGG | - | chr3_3:55417866-55417885 | None:intergenic | 35.0% | |
| TGTCTTCTTCTACTCTTCAA+TGG | + | chr3_3:55415677-55415696 | Msa0459080:CDS | 35.0% | |
| TAAGCCTAGTTGGCATAATT+TGG | + | chr3_3:55415701-55415720 | Msa0459080:CDS | 35.0% | |
| TGTTTGTTCCATTTATGGCT+TGG | - | chr3_3:55415729-55415748 | None:intergenic | 35.0% | |
| ATTGAGCTCTACTTGTGAAA+TGG | - | chr3_3:55415794-55415813 | None:intergenic | 35.0% | |
| ACAGAAATTGGGAGTAAAAG+AGG | - | chr3_3:55416411-55416430 | None:intergenic | 35.0% | |
| CATGGCATAAAAAGAGAGAA+AGG | + | chr3_3:55416454-55416473 | Msa0459080:CDS | 35.0% | |
| AAGAATCTACCATTTCACCA+TGG | + | chr3_3:55416479-55416498 | Msa0459080:CDS | 35.0% | |
| TTCACTATTATTCTCCTCCA+TGG | - | chr3_3:55416499-55416518 | None:intergenic | 35.0% | |
| AGGAGAATAATAGTGAAGAG+AGG | + | chr3_3:55416502-55416521 | Msa0459080:CDS | 35.0% | |
| !! | TTTTGGTGCAACTATTGGTT+TGG | + | chr3_3:55416650-55416669 | Msa0459080:CDS | 35.0% |
| ! | TTGTTCTGCTACTTCATCTT+TGG | + | chr3_3:55416713-55416732 | Msa0459080:CDS | 35.0% |
| TAGAAGTAGTCCAAAAGAGA+TGG | - | chr3_3:55416780-55416799 | None:intergenic | 35.0% | |
| ! | CTCTTTTGGACTACTTCTAT+AGG | + | chr3_3:55416781-55416800 | Msa0459080:CDS | 35.0% |
| ATTCCTTAACTAGTGCTTCT+GGG | + | chr3_3:55417220-55417239 | Msa0459080:intron | 35.0% | |
| TACTGCAGTGCTTATGTAAA+GGG | - | chr3_3:55417607-55417626 | None:intergenic | 35.0% | |
| TTACTGCAGTGCTTATGTAA+AGG | - | chr3_3:55417608-55417627 | None:intergenic | 35.0% | |
| ! | TACATAAGCACTGCAGTAAT+TGG | + | chr3_3:55417609-55417628 | Msa0459080:CDS | 35.0% |
| !!! | AGTTGTTTTGGAAATAGCAG+TGG | - | chr3_3:55417658-55417677 | None:intergenic | 35.0% |
| TCCAAAACAACTGAGCTATT+TGG | + | chr3_3:55417666-55417685 | Msa0459080:CDS | 35.0% | |
| AGTTGTGGCAAATATTCCAA+TGG | + | chr3_3:55417719-55417738 | Msa0459080:CDS | 35.0% | |
| GTTGTGGCAAATATTCCAAT+GGG | + | chr3_3:55417720-55417739 | Msa0459080:CDS | 35.0% | |
| AGCTGAGTAACCAAACAAAA+AGG | - | chr3_3:55417748-55417767 | None:intergenic | 35.0% | |
| AATGAACATGGGAAATGCAT+GGG | + | chr3_3:55417792-55417811 | Msa0459080:CDS | 35.0% | |
| TAAAGTTCCAAGGCAACAAA+AGG | - | chr3_3:55417856-55417875 | None:intergenic | 35.0% | |
| TTGTTGCCTTGGAACTTTAT+TGG | + | chr3_3:55417857-55417876 | Msa0459080:CDS | 35.0% | |
| TCAAAGCCAATAAAGTTCCA+AGG | - | chr3_3:55417866-55417885 | None:intergenic | 35.0% | |
| ! | ATTTGGCTCCAAGCCATAAA+TGG | + | chr3_3:55415718-55415737 | Msa0459080:CDS | 40.0% |
| ! | GGAAAGAAGTTGTTTCAGCT+GGG | - | chr3_3:55415773-55415792 | None:intergenic | 40.0% |
| ! | TGGAAAGAAGTTGTTTCAGC+TGG | - | chr3_3:55415774-55415793 | None:intergenic | 40.0% |
| ! | TCTGATGCTGGCAAACTTTT+TGG | + | chr3_3:55415829-55415848 | Msa0459080:CDS | 40.0% |
| !! | ATGCTGGCAAACTTTTTGGT+TGG | + | chr3_3:55415833-55415852 | Msa0459080:CDS | 40.0% |
| ! | CTGCTATTTACCTTCCCTTA+TGG | + | chr3_3:55415869-55415888 | Msa0459080:CDS | 40.0% |
| TTTCTCGGACTAATCGGTTA+TGG | + | chr3_3:55415913-55415932 | Msa0459080:CDS | 40.0% | |
| AACAAATGCTATTCCCAGCA+AGG | - | chr3_3:55416008-55416027 | None:intergenic | 40.0% | |
| TTGCTGGGAATAGCATTTGT+TGG | + | chr3_3:55416007-55416026 | Msa0459080:CDS | 40.0% | |
| TCTCTTGTACCTGTTGTAGT+TGG | + | chr3_3:55416195-55416214 | Msa0459080:CDS | 40.0% | |
| AATCTACCATTTCACCATGG+AGG | + | chr3_3:55416482-55416501 | Msa0459080:CDS | 40.0% | |
| TATTCTCCTCCATGGTGAAA+TGG | - | chr3_3:55416491-55416510 | None:intergenic | 40.0% | |
| GGACAAATAGCTGAATCAAG+AGG | + | chr3_3:55416690-55416709 | Msa0459080:CDS | 40.0% | |
| ! | GTGTCTTTGTCTTCTGCTTT+TGG | + | chr3_3:55416735-55416754 | Msa0459080:CDS | 40.0% |
| ! | ACGTCTCATTCCATCTCTTT+TGG | + | chr3_3:55416767-55416786 | Msa0459080:CDS | 40.0% |
| AGTTTAGGCAGCAAACTTCA+AGG | - | chr3_3:55416929-55416948 | None:intergenic | 40.0% | |
| AGAATGCTAACTAGTGCTCA+GGG | + | chr3_3:55417087-55417106 | Msa0459080:intron | 40.0% | |
| GATTCCTTAACTAGTGCTTC+TGG | + | chr3_3:55417219-55417238 | Msa0459080:intron | 40.0% | |
| ! | AGCCTCTTCTCTTATTGACT+TGG | + | chr3_3:55417383-55417402 | Msa0459080:intron | 40.0% |
| AGCCAAGTCAATAAGAGAAG+AGG | - | chr3_3:55417388-55417407 | None:intergenic | 40.0% | |
| ATAACTGCTACTATAGTGGC+AGG | - | chr3_3:55417534-55417553 | None:intergenic | 40.0% | |
| TGCCACTATAGTAGCAGTTA+TGG | + | chr3_3:55417533-55417552 | Msa0459080:CDS | 40.0% | |
| TGCCATAACTGCTACTATAG+TGG | - | chr3_3:55417538-55417557 | None:intergenic | 40.0% | |
| GCAGTAATTGGAGTTTCTAC+TGG | + | chr3_3:55417621-55417640 | Msa0459080:CDS | 40.0% | |
| ! | GCCAAATAGCTCAGTTGTTT+TGG | - | chr3_3:55417670-55417689 | None:intergenic | 40.0% |
| CCAAACAAAAAGGATCCCAT+TGG | - | chr3_3:55417738-55417757 | None:intergenic | 40.0% | |
| ! | CCAATGGGATCCTTTTTGTT+TGG | + | chr3_3:55417735-55417754 | Msa0459080:CDS | 40.0% |
| CACTTATTTACCGTGGTGAA+GGG | + | chr3_3:55417769-55417788 | Msa0459080:CDS | 40.0% | |
| GAATGAACATGGGAAATGCA+TGG | + | chr3_3:55417791-55417810 | Msa0459080:CDS | 40.0% | |
| ! | ATTTGGCTCCAAGCCATAAA+TGG | + | chr3_3:55415718-55415737 | Msa0459080:CDS | 40.0% |
| ! | GGAAAGAAGTTGTTTCAGCT+GGG | - | chr3_3:55415773-55415792 | None:intergenic | 40.0% |
| ! | TGGAAAGAAGTTGTTTCAGC+TGG | - | chr3_3:55415774-55415793 | None:intergenic | 40.0% |
| ! | TCTGATGCTGGCAAACTTTT+TGG | + | chr3_3:55415829-55415848 | Msa0459080:CDS | 40.0% |
| !! | ATGCTGGCAAACTTTTTGGT+TGG | + | chr3_3:55415833-55415852 | Msa0459080:CDS | 40.0% |
| ! | CTGCTATTTACCTTCCCTTA+TGG | + | chr3_3:55415869-55415888 | Msa0459080:CDS | 40.0% |
| TTTCTCGGACTAATCGGTTA+TGG | + | chr3_3:55415913-55415932 | Msa0459080:CDS | 40.0% | |
| AACAAATGCTATTCCCAGCA+AGG | - | chr3_3:55416008-55416027 | None:intergenic | 40.0% | |
| TTGCTGGGAATAGCATTTGT+TGG | + | chr3_3:55416007-55416026 | Msa0459080:CDS | 40.0% | |
| TCTCTTGTACCTGTTGTAGT+TGG | + | chr3_3:55416195-55416214 | Msa0459080:CDS | 40.0% | |
| AATCTACCATTTCACCATGG+AGG | + | chr3_3:55416482-55416501 | Msa0459080:CDS | 40.0% | |
| TATTCTCCTCCATGGTGAAA+TGG | - | chr3_3:55416491-55416510 | None:intergenic | 40.0% | |
| GGACAAATAGCTGAATCAAG+AGG | + | chr3_3:55416690-55416709 | Msa0459080:CDS | 40.0% | |
| ! | GTGTCTTTGTCTTCTGCTTT+TGG | + | chr3_3:55416735-55416754 | Msa0459080:CDS | 40.0% |
| ! | ACGTCTCATTCCATCTCTTT+TGG | + | chr3_3:55416767-55416786 | Msa0459080:CDS | 40.0% |
| AGTTTAGGCAGCAAACTTCA+AGG | - | chr3_3:55416929-55416948 | None:intergenic | 40.0% | |
| AGAATGCTAACTAGTGCTCA+GGG | + | chr3_3:55417087-55417106 | Msa0459080:intron | 40.0% | |
| GATTCCTTAACTAGTGCTTC+TGG | + | chr3_3:55417219-55417238 | Msa0459080:intron | 40.0% | |
| ! | AGCCTCTTCTCTTATTGACT+TGG | + | chr3_3:55417383-55417402 | Msa0459080:intron | 40.0% |
| AGCCAAGTCAATAAGAGAAG+AGG | - | chr3_3:55417388-55417407 | None:intergenic | 40.0% | |
| ATAACTGCTACTATAGTGGC+AGG | - | chr3_3:55417534-55417553 | None:intergenic | 40.0% | |
| TGCCACTATAGTAGCAGTTA+TGG | + | chr3_3:55417533-55417552 | Msa0459080:CDS | 40.0% | |
| TGCCATAACTGCTACTATAG+TGG | - | chr3_3:55417538-55417557 | None:intergenic | 40.0% | |
| GCAGTAATTGGAGTTTCTAC+TGG | + | chr3_3:55417621-55417640 | Msa0459080:CDS | 40.0% | |
| ! | GCCAAATAGCTCAGTTGTTT+TGG | - | chr3_3:55417670-55417689 | None:intergenic | 40.0% |
| CCAAACAAAAAGGATCCCAT+TGG | - | chr3_3:55417738-55417757 | None:intergenic | 40.0% | |
| ! | CCAATGGGATCCTTTTTGTT+TGG | + | chr3_3:55417735-55417754 | Msa0459080:CDS | 40.0% |
| CACTTATTTACCGTGGTGAA+GGG | + | chr3_3:55417769-55417788 | Msa0459080:CDS | 40.0% | |
| GAATGAACATGGGAAATGCA+TGG | + | chr3_3:55417791-55417810 | Msa0459080:CDS | 40.0% | |
| CTTCAATGGCTAAGCCTAGT+TGG | + | chr3_3:55415691-55415710 | Msa0459080:CDS | 45.0% | |
| GGAGCCAAATTATGCCAACT+AGG | - | chr3_3:55415708-55415727 | None:intergenic | 45.0% | |
| CAGCATCAGATGCAAAAGCA+AGG | - | chr3_3:55415819-55415838 | None:intergenic | 45.0% | |
| !! | CTTGCTTTTGCATCTGATGC+TGG | + | chr3_3:55415817-55415836 | Msa0459080:CDS | 45.0% |
| AGGGAAGGTAAATAGCAGCA+AGG | - | chr3_3:55415867-55415886 | None:intergenic | 45.0% | |
| ATGATGAGGACGAGCCATAA+GGG | - | chr3_3:55415886-55415905 | None:intergenic | 45.0% | |
| TTATGGCTCGTCCTCATCAT+CGG | + | chr3_3:55415886-55415905 | Msa0459080:CDS | 45.0% | |
| !! | CTCATCATCGGTTCGTTTCT+CGG | + | chr3_3:55415898-55415917 | Msa0459080:CDS | 45.0% |
| GGTTCGTTTCTCGGACTAAT+CGG | + | chr3_3:55415907-55415926 | Msa0459080:CDS | 45.0% | |
| !! | TCCTCACTTGGTGTGCTTAT+TGG | + | chr3_3:55416363-55416382 | Msa0459080:CDS | 45.0% |
| ACCAATAAGCACACCAAGTG+AGG | - | chr3_3:55416367-55416386 | None:intergenic | 45.0% | |
| GAGAATGCTAACTAGTGCTC+AGG | + | chr3_3:55417086-55417105 | Msa0459080:intron | 45.0% | |
| GAATGCTAACTAGTGCTCAG+GGG | + | chr3_3:55417088-55417107 | Msa0459080:intron | 45.0% | |
| CAGTGCTTATGTAAAGGGCA+AGG | - | chr3_3:55417602-55417621 | None:intergenic | 45.0% | |
| TCAGCTGCACTTATTTACCG+TGG | + | chr3_3:55417762-55417781 | Msa0459080:CDS | 45.0% | |
| GCACTTATTTACCGTGGTGA+AGG | + | chr3_3:55417768-55417787 | Msa0459080:CDS | 45.0% | |
| CATGTTCATTCCCTTCACCA+CGG | - | chr3_3:55417782-55417801 | None:intergenic | 45.0% | |
| GTGGTGAAGGGAATGAACAT+GGG | + | chr3_3:55417781-55417800 | Msa0459080:CDS | 45.0% | |
| CTTCAATGGCTAAGCCTAGT+TGG | + | chr3_3:55415691-55415710 | Msa0459080:CDS | 45.0% | |
| GGAGCCAAATTATGCCAACT+AGG | - | chr3_3:55415708-55415727 | None:intergenic | 45.0% | |
| CAGCATCAGATGCAAAAGCA+AGG | - | chr3_3:55415819-55415838 | None:intergenic | 45.0% | |
| !! | CTTGCTTTTGCATCTGATGC+TGG | + | chr3_3:55415817-55415836 | Msa0459080:CDS | 45.0% |
| AGGGAAGGTAAATAGCAGCA+AGG | - | chr3_3:55415867-55415886 | None:intergenic | 45.0% | |
| ATGATGAGGACGAGCCATAA+GGG | - | chr3_3:55415886-55415905 | None:intergenic | 45.0% | |
| TTATGGCTCGTCCTCATCAT+CGG | + | chr3_3:55415886-55415905 | Msa0459080:CDS | 45.0% | |
| !! | CTCATCATCGGTTCGTTTCT+CGG | + | chr3_3:55415898-55415917 | Msa0459080:CDS | 45.0% |
| GGTTCGTTTCTCGGACTAAT+CGG | + | chr3_3:55415907-55415926 | Msa0459080:CDS | 45.0% | |
| !! | TCCTCACTTGGTGTGCTTAT+TGG | + | chr3_3:55416363-55416382 | Msa0459080:CDS | 45.0% |
| ACCAATAAGCACACCAAGTG+AGG | - | chr3_3:55416367-55416386 | None:intergenic | 45.0% | |
| GAGAATGCTAACTAGTGCTC+AGG | + | chr3_3:55417086-55417105 | Msa0459080:intron | 45.0% | |
| GAATGCTAACTAGTGCTCAG+GGG | + | chr3_3:55417088-55417107 | Msa0459080:intron | 45.0% | |
| CAGTGCTTATGTAAAGGGCA+AGG | - | chr3_3:55417602-55417621 | None:intergenic | 45.0% | |
| TCAGCTGCACTTATTTACCG+TGG | + | chr3_3:55417762-55417781 | Msa0459080:CDS | 45.0% | |
| GCACTTATTTACCGTGGTGA+AGG | + | chr3_3:55417768-55417787 | Msa0459080:CDS | 45.0% | |
| CATGTTCATTCCCTTCACCA+CGG | - | chr3_3:55417782-55417801 | None:intergenic | 45.0% | |
| GTGGTGAAGGGAATGAACAT+GGG | + | chr3_3:55417781-55417800 | Msa0459080:CDS | 45.0% | |
| TCAGCTGGGAAGAGTAAGCA+GGG | - | chr3_3:55415759-55415778 | None:intergenic | 50.0% | |
| TTCAGCTGGGAAGAGTAAGC+AGG | - | chr3_3:55415760-55415779 | None:intergenic | 50.0% | |
| GATGATGAGGACGAGCCATA+AGG | - | chr3_3:55415887-55415906 | None:intergenic | 50.0% | |
| CGAGAAACGAACCGATGATG+AGG | - | chr3_3:55415900-55415919 | None:intergenic | 50.0% | |
| ! | TAACTAGTGCTCAGGGGCAT+TGG | + | chr3_3:55417094-55417113 | Msa0459080:intron | 50.0% |
| !! | GGTCCCAGAAGCACTAGTTA+AGG | - | chr3_3:55417226-55417245 | None:intergenic | 50.0% |
| CGTGGTGAAGGGAATGAACA+TGG | + | chr3_3:55417780-55417799 | Msa0459080:CDS | 50.0% | |
| ACATGGGAAATGCATGGGCA+TGG | + | chr3_3:55417797-55417816 | Msa0459080:CDS | 50.0% | |
| ! | TGGGGTTCCTTTTGTTGCCT+TGG | + | chr3_3:55417846-55417865 | Msa0459080:CDS | 50.0% |
| TCAGCTGGGAAGAGTAAGCA+GGG | - | chr3_3:55415759-55415778 | None:intergenic | 50.0% | |
| TTCAGCTGGGAAGAGTAAGC+AGG | - | chr3_3:55415760-55415779 | None:intergenic | 50.0% | |
| GATGATGAGGACGAGCCATA+AGG | - | chr3_3:55415887-55415906 | None:intergenic | 50.0% | |
| CGAGAAACGAACCGATGATG+AGG | - | chr3_3:55415900-55415919 | None:intergenic | 50.0% | |
| ! | TAACTAGTGCTCAGGGGCAT+TGG | + | chr3_3:55417094-55417113 | Msa0459080:intron | 50.0% |
| !! | GGTCCCAGAAGCACTAGTTA+AGG | - | chr3_3:55417226-55417245 | None:intergenic | 50.0% |
| CGTGGTGAAGGGAATGAACA+TGG | + | chr3_3:55417780-55417799 | Msa0459080:CDS | 50.0% | |
| ACATGGGAAATGCATGGGCA+TGG | + | chr3_3:55417797-55417816 | Msa0459080:CDS | 50.0% | |
| ! | TGGGGTTCCTTTTGTTGCCT+TGG | + | chr3_3:55417846-55417865 | Msa0459080:CDS | 50.0% |
| TGAGGACGAGCCATAAGGGA+AGG | - | chr3_3:55415882-55415901 | None:intergenic | 55.0% | |
| TTCGATCGGCAAGTTGCCGT+TGG | + | chr3_3:55416072-55416091 | Msa0459080:CDS | 55.0% | |
| TGAGGACGAGCCATAAGGGA+AGG | - | chr3_3:55415882-55415901 | None:intergenic | 55.0% | |
| TTCGATCGGCAAGTTGCCGT+TGG | + | chr3_3:55416072-55416091 | Msa0459080:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 55415638 | 55417976 | 55415638 | ID=Msa0459080;Name=Msa0459080 |
| chr3_3 | mRNA | 55415638 | 55417976 | 55415638 | ID=Msa0459080-mRNA-1;Parent=Msa0459080;Name=Msa0459080-mRNA-1;_AED=0.01;_eAED=0.01;_QI=38|1|1|1|1|1|2|47|515 |
| chr3_3 | exon | 55415638 | 55416802 | 55415638 | ID=Msa0459080-mRNA-1:exon:10967;Parent=Msa0459080-mRNA-1 |
| chr3_3 | exon | 55417509 | 55417976 | 55417509 | ID=Msa0459080-mRNA-1:exon:10968;Parent=Msa0459080-mRNA-1 |
| chr3_3 | five_prime_UTR | 55415638 | 55415675 | 55415638 | ID=Msa0459080-mRNA-1:five_prime_utr;Parent=Msa0459080-mRNA-1 |
| chr3_3 | CDS | 55415676 | 55416802 | 55415676 | ID=Msa0459080-mRNA-1:cds;Parent=Msa0459080-mRNA-1 |
| chr3_3 | CDS | 55417509 | 55417929 | 55417509 | ID=Msa0459080-mRNA-1:cds;Parent=Msa0459080-mRNA-1 |
| chr3_3 | three_prime_UTR | 55417930 | 55417976 | 55417930 | ID=Msa0459080-mRNA-1:three_prime_utr;Parent=Msa0459080-mRNA-1 |
| Gene Sequence |
| Protein sequence |
