Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375940 | XP_003610062.1 | 87.273 | 385 | 45 | 3 | 1 | 384 | 1 | 382 | 0.0 | 688 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375940 | sp|Q9LVD4|ORP4C_ARATH | 50.781 | 384 | 181 | 4 | 1 | 383 | 1 | 377 | 5.14e-136 | 396 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375940 | G7JUB4 | 87.273 | 385 | 45 | 3 | 1 | 384 | 1 | 382 | 0.0 | 688 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa1375940 | 0.839684 | 1.367687e-57 | -8.615850e-47 |
| Msa0003470 | Msa1375940 | 0.820216 | 7.711459e-53 | -8.615850e-47 |
| Msa0005050 | Msa1375940 | 0.833351 | 5.606683e-56 | -8.615850e-47 |
| Msa0008830 | Msa1375940 | 0.840389 | 8.955009e-58 | -8.615850e-47 |
| Msa0012440 | Msa1375940 | 0.806692 | 7.270536e-50 | -8.615850e-47 |
| Msa0014920 | Msa1375940 | 0.803252 | 3.808818e-49 | -8.615850e-47 |
| Msa0017120 | Msa1375940 | 0.838177 | 3.357157e-57 | -8.615850e-47 |
| Msa0017940 | Msa1375940 | 0.857856 | 1.227127e-62 | -8.615850e-47 |
| Msa0018220 | Msa1375940 | 0.805909 | 1.063176e-49 | -8.615850e-47 |
| Msa0024680 | Msa1375940 | 0.845970 | 2.912141e-59 | -8.615850e-47 |
| Msa0027540 | Msa1375940 | 0.820174 | 7.885276e-53 | -8.615850e-47 |
| Msa0028060 | Msa1375940 | 0.805352 | 1.391528e-49 | -8.615850e-47 |
| Msa0029620 | Msa1375940 | 0.817904 | 2.588210e-52 | -8.615850e-47 |
| Msa0030000 | Msa1375940 | 0.808691 | 2.734286e-50 | -8.615850e-47 |
| Msa0030310 | Msa1375940 | 0.821532 | 3.840580e-53 | -8.615850e-47 |
| Msa0030730 | Msa1375940 | 0.825226 | 5.262135e-54 | -8.615850e-47 |
| Msa0032120 | Msa1375940 | 0.820529 | 6.535695e-53 | -8.615850e-47 |
| Msa0032400 | Msa1375940 | 0.824298 | 8.706620e-54 | -8.615850e-47 |
| Msa0032840 | Msa1375940 | -0.806758 | 7.039556e-50 | -8.615850e-47 |
| Msa0036430 | Msa1375940 | 0.803367 | 3.606288e-49 | -8.615850e-47 |
| Msa0043680 | Msa1375940 | 0.814119 | 1.812226e-51 | -8.615850e-47 |
| Msa0048020 | Msa1375940 | 0.828782 | 7.423622e-55 | -8.615850e-47 |
| Msa0050430 | Msa1375940 | 0.818647 | 1.757440e-52 | -8.615850e-47 |
| Msa0050580 | Msa1375940 | 0.814101 | 1.829033e-51 | -8.615850e-47 |
| Msa0052460 | Msa1375940 | 0.802605 | 5.182463e-49 | -8.615850e-47 |
| Msa0053110 | Msa1375940 | 0.833654 | 4.710540e-56 | -8.615850e-47 |
| Msa0057240 | Msa1375940 | 0.801068 | 1.071848e-48 | -8.615850e-47 |
| Msa0065390 | Msa1375940 | 0.800325 | 1.519486e-48 | -8.615850e-47 |
| Msa0075310 | Msa1375940 | 0.806417 | 8.312042e-50 | -8.615850e-47 |
| Msa0084680 | Msa1375940 | 0.808894 | 2.474955e-50 | -8.615850e-47 |
| Msa0089210 | Msa1375940 | 0.840357 | 9.130674e-58 | -8.615850e-47 |
| Msa0092660 | Msa1375940 | 0.824367 | 8.388436e-54 | -8.615850e-47 |
| Msa0092680 | Msa1375940 | 0.809898 | 1.507046e-50 | -8.615850e-47 |
| Msa0092730 | Msa1375940 | 0.829812 | 4.174546e-55 | -8.615850e-47 |
| Msa0094420 | Msa1375940 | 0.811264 | 7.638881e-51 | -8.615850e-47 |
| Msa0095380 | Msa1375940 | 0.800939 | 1.138885e-48 | -8.615850e-47 |
| Msa0097050 | Msa1375940 | 0.809018 | 2.327950e-50 | -8.615850e-47 |
| Msa0098440 | Msa1375940 | 0.818804 | 1.619192e-52 | -8.615850e-47 |
| Msa0105420 | Msa1375940 | 0.801665 | 8.090015e-49 | -8.615850e-47 |
| Msa0110710 | Msa1375940 | 0.800952 | 1.131901e-48 | -8.615850e-47 |
| Msa0113160 | Msa1375940 | 0.826865 | 2.145375e-54 | -8.615850e-47 |
| Msa0120330 | Msa1375940 | 0.838090 | 3.534631e-57 | -8.615850e-47 |
| Msa1354040 | Msa1375940 | 0.823840 | 1.115052e-53 | -8.615850e-47 |
| Msa1362510 | Msa1375940 | 0.810351 | 1.203604e-50 | -8.615850e-47 |
| Msa1365200 | Msa1375940 | 0.802484 | 5.490040e-49 | -8.615850e-47 |
| Msa1365320 | Msa1375940 | 0.912024 | 3.126675e-83 | -8.615850e-47 |
| Msa1365870 | Msa1375940 | 0.838972 | 2.092659e-57 | -8.615850e-47 |
| Msa1367940 | Msa1375940 | 0.823837 | 1.117060e-53 | -8.615850e-47 |
| Msa1373510 | Msa1375940 | 0.843852 | 1.085582e-58 | -8.615850e-47 |
| Msa1374440 | Msa1375940 | 0.818569 | 1.830266e-52 | -8.615850e-47 |
| Msa1375940 | Msa1376400 | 0.902297 | 1.119276e-78 | -8.615850e-47 |
| Msa1375940 | Msa1376640 | 0.811186 | 7.941692e-51 | -8.615850e-47 |
| Msa1375940 | Msa1379990 | 0.825223 | 5.270433e-54 | -8.615850e-47 |
| Msa1375940 | Msa1381130 | 0.814069 | 1.858928e-51 | -8.615850e-47 |
| Msa1375940 | Msa1382310 | 0.847542 | 1.082842e-59 | -8.615850e-47 |
| Msa1375940 | Msa1385620 | 0.831724 | 1.419393e-55 | -8.615850e-47 |
| Msa1375940 | Msa1385900 | 0.816381 | 5.693464e-52 | -8.615850e-47 |
| Msa1375940 | Msa1390310 | 0.832100 | 1.146304e-55 | -8.615850e-47 |
| Msa1375940 | Msa1391590 | 0.873277 | 1.665451e-67 | -8.615850e-47 |
| Msa1375940 | Msa1398480 | 0.829754 | 4.313471e-55 | -8.615850e-47 |
| Msa1375940 | Msa1404370 | 0.800004 | 1.766350e-48 | -8.615850e-47 |
| Msa1375940 | Msa1405770 | 0.805759 | 1.143209e-49 | -8.615850e-47 |
| Msa1375940 | Msa1407710 | 0.809826 | 1.561498e-50 | -8.615850e-47 |
| Msa1375940 | Msa1412520 | 0.803314 | 3.699217e-49 | -8.615850e-47 |
| Msa1375940 | Msa1418200 | 0.819018 | 1.447220e-52 | -8.615850e-47 |
| Msa1375940 | Msa1420060 | 0.821569 | 3.766584e-53 | -8.615850e-47 |
| Msa1375940 | Msa1422270 | 0.817087 | 3.955510e-52 | -8.615850e-47 |
| Msa1375940 | Msa1429360 | -0.803729 | 3.033243e-49 | -8.615850e-47 |
| Msa1375940 | Msa1429420 | 0.809959 | 1.462337e-50 | -8.615850e-47 |
| Msa1375940 | Msa1438360 | 0.803299 | 3.725378e-49 | -8.615850e-47 |
| Msa1375940 | Msa1439670 | 0.811586 | 6.500849e-51 | -8.615850e-47 |
| Msa1375940 | Msa1447230 | 0.823656 | 1.231740e-53 | -8.615850e-47 |
| Msa1375940 | Msa1456650 | 0.815387 | 9.488395e-52 | -8.615850e-47 |
| Msa1375940 | Msa1464730 | 0.814812 | 1.273489e-51 | -8.615850e-47 |
| Msa0605620 | Msa1375940 | 0.834469 | 2.944623e-56 | -8.615850e-47 |
| Msa0607200 | Msa1375940 | 0.808852 | 2.526414e-50 | -8.615850e-47 |
| Msa0610860 | Msa1375940 | 0.811460 | 6.925135e-51 | -8.615850e-47 |
| Msa0619330 | Msa1375940 | 0.817287 | 3.565748e-52 | -8.615850e-47 |
| Msa0619980 | Msa1375940 | 0.804731 | 1.876604e-49 | -8.615850e-47 |
| Msa0630990 | Msa1375940 | 0.802556 | 5.303939e-49 | -8.615850e-47 |
| Msa0642650 | Msa1375940 | 0.850520 | 1.610169e-60 | -8.615850e-47 |
| Msa0647380 | Msa1375940 | 0.814739 | 1.321795e-51 | -8.615850e-47 |
| Msa0652980 | Msa1375940 | 0.825993 | 3.461220e-54 | -8.615850e-47 |
| Msa0661470 | Msa1375940 | 0.806719 | 7.176380e-50 | -8.615850e-47 |
| Msa0667220 | Msa1375940 | 0.801836 | 7.462175e-49 | -8.615850e-47 |
| Msa0667970 | Msa1375940 | 0.805414 | 1.350260e-49 | -8.615850e-47 |
| Msa0669220 | Msa1375940 | 0.807480 | 4.952524e-50 | -8.615850e-47 |
| Msa0669850 | Msa1375940 | 0.825060 | 5.759244e-54 | -8.615850e-47 |
| Msa0672110 | Msa1375940 | 0.806066 | 9.850839e-50 | -8.615850e-47 |
| Msa0678890 | Msa1375940 | 0.825068 | 5.733451e-54 | -8.615850e-47 |
| Msa0681890 | Msa1375940 | 0.837755 | 4.311426e-57 | -8.615850e-47 |
| Msa0682400 | Msa1375940 | 0.821509 | 3.888409e-53 | -8.615850e-47 |
| Msa0693570 | Msa1375940 | 0.818037 | 2.415976e-52 | -8.615850e-47 |
| Msa0703720 | Msa1375940 | 0.809812 | 1.572231e-50 | -8.615850e-47 |
| Msa0703760 | Msa1375940 | 0.827220 | 1.763966e-54 | -8.615850e-47 |
| Msa0707780 | Msa1375940 | 0.828543 | 8.479685e-55 | -8.615850e-47 |
| Msa0709480 | Msa1375940 | 0.811795 | 5.855443e-51 | -8.615850e-47 |
| Msa0720270 | Msa1375940 | 0.818645 | 1.759428e-52 | -8.615850e-47 |
| Msa0724290 | Msa1375940 | 0.820226 | 7.671923e-53 | -8.615850e-47 |
| Msa0730180 | Msa1375940 | 0.830119 | 3.514849e-55 | -8.615850e-47 |
| Msa0735470 | Msa1375940 | 0.803870 | 2.835764e-49 | -8.615850e-47 |
| Msa0740420 | Msa1375940 | 0.818190 | 2.230741e-52 | -8.615850e-47 |
| Msa0746600 | Msa1375940 | 0.822474 | 2.324055e-53 | -8.615850e-47 |
| Msa0747780 | Msa1375940 | 0.837475 | 5.084611e-57 | -8.615850e-47 |
| Msa0761580 | Msa1375940 | 0.809858 | 1.537221e-50 | -8.615850e-47 |
| Msa0770430 | Msa1375940 | 0.826793 | 2.232549e-54 | -8.615850e-47 |
| Msa0802210 | Msa1375940 | 0.810571 | 1.078612e-50 | -8.615850e-47 |
| Msa0808420 | Msa1375940 | 0.806709 | 7.209507e-50 | -8.615850e-47 |
| Msa0820670 | Msa1375940 | 0.819634 | 1.047950e-52 | -8.615850e-47 |
| Msa0125440 | Msa1375940 | 0.804650 | 1.951226e-49 | -8.615850e-47 |
| Msa0132180 | Msa1375940 | 0.804517 | 2.080095e-49 | -8.615850e-47 |
| Msa0135980 | Msa1375940 | 0.834017 | 3.821849e-56 | -8.615850e-47 |
| Msa0137600 | Msa1375940 | 0.830791 | 2.406684e-55 | -8.615850e-47 |
| Msa0139900 | Msa1375940 | 0.840109 | 1.059697e-57 | -8.615850e-47 |
| Msa0140220 | Msa1375940 | 0.806043 | 9.960446e-50 | -8.615850e-47 |
| Msa0141430 | Msa1375940 | 0.827471 | 1.536491e-54 | -8.615850e-47 |
| Msa0141830 | Msa1375940 | 0.868678 | 5.460377e-66 | -8.615850e-47 |
| Msa0142870 | Msa1375940 | 0.809174 | 2.155952e-50 | -8.615850e-47 |
| Msa0145950 | Msa1375940 | 0.811875 | 5.625836e-51 | -8.615850e-47 |
| Msa0146470 | Msa1375940 | 0.803452 | 3.463467e-49 | -8.615850e-47 |
| Msa0149500 | Msa1375940 | 0.801477 | 8.839057e-49 | -8.615850e-47 |
| Msa0149560 | Msa1375940 | 0.804133 | 2.500406e-49 | -8.615850e-47 |
| Msa0149620 | Msa1375940 | 0.811439 | 6.996157e-51 | -8.615850e-47 |
| Msa0157020 | Msa1375940 | 0.807802 | 4.230579e-50 | -8.615850e-47 |
| Msa0168100 | Msa1375940 | 0.821468 | 3.974694e-53 | -8.615850e-47 |
| Msa0169620 | Msa1375940 | 0.830960 | 2.188137e-55 | -8.615850e-47 |
| Msa0170680 | Msa1375940 | 0.815729 | 7.962480e-52 | -8.615850e-47 |
| Msa0172350 | Msa1375940 | 0.821431 | 4.052211e-53 | -8.615850e-47 |
| Msa0173820 | Msa1375940 | 0.801564 | 8.484036e-49 | -8.615850e-47 |
| Msa0173830 | Msa1375940 | 0.808483 | 3.029261e-50 | -8.615850e-47 |
| Msa0183610 | Msa1375940 | 0.815224 | 1.031663e-51 | -8.615850e-47 |
| Msa0183620 | Msa1375940 | 0.808263 | 3.375060e-50 | -8.615850e-47 |
| Msa0185390 | Msa1375940 | 0.816930 | 4.289328e-52 | -8.615850e-47 |
| Msa0185700 | Msa1375940 | 0.826359 | 2.833469e-54 | -8.615850e-47 |
| Msa0194570 | Msa1375940 | 0.802137 | 6.471905e-49 | -8.615850e-47 |
| Msa0194970 | Msa1375940 | 0.803016 | 4.263333e-49 | -8.615850e-47 |
| Msa0203160 | Msa1375940 | 0.812124 | 4.964347e-51 | -8.615850e-47 |
| Msa0207000 | Msa1375940 | 0.831786 | 1.370404e-55 | -8.615850e-47 |
| Msa0207180 | Msa1375940 | 0.823529 | 1.318990e-53 | -8.615850e-47 |
| Msa0213080 | Msa1375940 | 0.814570 | 1.440789e-51 | -8.615850e-47 |
| Msa0219190 | Msa1375940 | 0.826273 | 2.970095e-54 | -8.615850e-47 |
| Msa0219310 | Msa1375940 | 0.810195 | 1.300260e-50 | -8.615850e-47 |
| Msa0227490 | Msa1375940 | 0.815612 | 8.456100e-52 | -8.615850e-47 |
| Msa0227500 | Msa1375940 | 0.820448 | 6.821228e-53 | -8.615850e-47 |
| Msa0230400 | Msa1375940 | 0.839507 | 1.520030e-57 | -8.615850e-47 |
| Msa0230550 | Msa1375940 | -0.800153 | 1.646987e-48 | -8.615850e-47 |
| Msa1224670 | Msa1375940 | 0.816927 | 4.296150e-52 | -8.615850e-47 |
| Msa1229050 | Msa1375940 | 0.800052 | 1.726582e-48 | -8.615850e-47 |
| Msa1235890 | Msa1375940 | 0.829556 | 4.819677e-55 | -8.615850e-47 |
| Msa1243170 | Msa1375940 | 0.801121 | 1.045531e-48 | -8.615850e-47 |
| Msa1249870 | Msa1375940 | 0.812356 | 4.416972e-51 | -8.615850e-47 |
| Msa1250670 | Msa1375940 | 0.839844 | 1.242800e-57 | -8.615850e-47 |
| Msa1251290 | Msa1375940 | 0.830781 | 2.419821e-55 | -8.615850e-47 |
| Msa1254770 | Msa1375940 | 0.820296 | 7.393989e-53 | -8.615850e-47 |
| Msa1254800 | Msa1375940 | 0.817903 | 2.589873e-52 | -8.615850e-47 |
| Msa1262310 | Msa1375940 | 0.801542 | 8.571675e-49 | -8.615850e-47 |
| Msa1263030 | Msa1375940 | 0.806737 | 7.113442e-50 | -8.615850e-47 |
| Msa1263660 | Msa1375940 | 0.805596 | 1.236956e-49 | -8.615850e-47 |
| Msa1269580 | Msa1375940 | -0.803596 | 3.232255e-49 | -8.615850e-47 |
| Msa1271510 | Msa1375940 | 0.833410 | 5.420866e-56 | -8.615850e-47 |
| Msa1280120 | Msa1375940 | 0.813772 | 2.161498e-51 | -8.615850e-47 |
| Msa1284070 | Msa1375940 | 0.805617 | 1.224138e-49 | -8.615850e-47 |
| Msa1284520 | Msa1375940 | 0.828197 | 1.027816e-54 | -8.615850e-47 |
| Msa1302150 | Msa1375940 | 0.845475 | 3.969303e-59 | -8.615850e-47 |
| Msa1302460 | Msa1375940 | 0.808122 | 3.616801e-50 | -8.615850e-47 |
| Msa1309360 | Msa1375940 | 0.825882 | 3.678837e-54 | -8.615850e-47 |
| Msa1319580 | Msa1375940 | 0.802294 | 6.006245e-49 | -8.615850e-47 |
| Msa1321000 | Msa1375940 | 0.806141 | 9.502136e-50 | -8.615850e-47 |
| Msa1325980 | Msa1375940 | 0.803808 | 2.920724e-49 | -8.615850e-47 |
| Msa0371070 | Msa1375940 | 0.817290 | 3.561213e-52 | -8.615850e-47 |
| Msa0373490 | Msa1375940 | 0.808488 | 3.021802e-50 | -8.615850e-47 |
| Msa0376510 | Msa1375940 | 0.830144 | 3.464922e-55 | -8.615850e-47 |
| Msa0382560 | Msa1375940 | 0.806447 | 8.189445e-50 | -8.615850e-47 |
| Msa0413180 | Msa1375940 | 0.831016 | 2.119527e-55 | -8.615850e-47 |
| Msa0413930 | Msa1375940 | 0.819145 | 1.354384e-52 | -8.615850e-47 |
| Msa0417630 | Msa1375940 | 0.830053 | 3.646620e-55 | -8.615850e-47 |
| Msa0423360 | Msa1375940 | -0.804506 | 2.090910e-49 | -8.615850e-47 |
| Msa0425050 | Msa1375940 | 0.820276 | 7.470743e-53 | -8.615850e-47 |
| Msa0429520 | Msa1375940 | -0.809091 | 2.245248e-50 | -8.615850e-47 |
| Msa0432680 | Msa1375940 | 0.806077 | 9.798966e-50 | -8.615850e-47 |
| Msa0436090 | Msa1375940 | 0.802086 | 6.628874e-49 | -8.615850e-47 |
| Msa0436280 | Msa1375940 | -0.807421 | 5.097157e-50 | -8.615850e-47 |
| Msa0436460 | Msa1375940 | 0.809685 | 1.674276e-50 | -8.615850e-47 |
| Msa0437710 | Msa1375940 | 0.805791 | 1.125304e-49 | -8.615850e-47 |
| Msa0441800 | Msa1375940 | 0.818478 | 1.919866e-52 | -8.615850e-47 |
| Msa0467920 | Msa1375940 | -0.825478 | 4.585726e-54 | -8.615850e-47 |
| Msa0469910 | Msa1375940 | -0.815776 | 7.774213e-52 | -8.615850e-47 |
| Msa0480320 | Msa1375940 | 0.806429 | 8.260290e-50 | -8.615850e-47 |
| Msa0990520 | Msa1375940 | 0.832758 | 7.872481e-56 | -8.615850e-47 |
| Msa1002040 | Msa1375940 | 0.806803 | 6.889312e-50 | -8.615850e-47 |
| Msa1004500 | Msa1375940 | 0.843936 | 1.030871e-58 | -8.615850e-47 |
| Msa1004520 | Msa1375940 | 0.834225 | 3.390078e-56 | -8.615850e-47 |
| Msa1007350 | Msa1375940 | 0.807534 | 4.823828e-50 | -8.615850e-47 |
| Msa1011760 | Msa1375940 | 0.800244 | 1.578452e-48 | -8.615850e-47 |
| Msa1012810 | Msa1375940 | 0.805828 | 1.105320e-49 | -8.615850e-47 |
| Msa1014270 | Msa1375940 | 0.828392 | 9.221182e-55 | -8.615850e-47 |
| Msa1018790 | Msa1375940 | 0.834415 | 3.036644e-56 | -8.615850e-47 |
| Msa1022310 | Msa1375940 | 0.805093 | 1.576165e-49 | -8.615850e-47 |
| Msa1022650 | Msa1375940 | 0.822189 | 2.706515e-53 | -8.615850e-47 |
| Msa1027790 | Msa1375940 | 0.826991 | 2.001193e-54 | -8.615850e-47 |
| Msa1028460 | Msa1375940 | 0.818052 | 2.397290e-52 | -8.615850e-47 |
| Msa1033560 | Msa1375940 | 0.832365 | 9.852420e-56 | -8.615850e-47 |
| Msa1044340 | Msa1375940 | 0.827599 | 1.431518e-54 | -8.615850e-47 |
| Msa1045880 | Msa1375940 | 0.829900 | 3.973399e-55 | -8.615850e-47 |
| Msa1045970 | Msa1375940 | 0.832521 | 9.016568e-56 | -8.615850e-47 |
| Msa1046870 | Msa1375940 | 0.827115 | 1.869461e-54 | -8.615850e-47 |
| Msa1048710 | Msa1375940 | 0.813529 | 2.444651e-51 | -8.615850e-47 |
| Msa1051300 | Msa1375940 | 0.805700 | 1.176401e-49 | -8.615850e-47 |
| Msa1054240 | Msa1375940 | 0.816275 | 6.015220e-52 | -8.615850e-47 |
| Msa1055260 | Msa1375940 | 0.822560 | 2.219263e-53 | -8.615850e-47 |
| Msa1055280 | Msa1375940 | 0.803613 | 3.207092e-49 | -8.615850e-47 |
| Msa1055500 | Msa1375940 | 0.815471 | 9.087808e-52 | -8.615850e-47 |
| Msa1058010 | Msa1375940 | 0.809993 | 1.437679e-50 | -8.615850e-47 |
| Msa1061180 | Msa1375940 | 0.829573 | 4.774225e-55 | -8.615850e-47 |
| Msa1061500 | Msa1375940 | 0.811985 | 5.322221e-51 | -8.615850e-47 |
| Msa1072080 | Msa1375940 | 0.809227 | 2.099957e-50 | -8.615850e-47 |
| Msa1073840 | Msa1375940 | 0.802351 | 5.845977e-49 | -8.615850e-47 |
| Msa1082700 | Msa1375940 | 0.804515 | 2.081811e-49 | -8.615850e-47 |
| Msa1084490 | Msa1375940 | 0.808274 | 3.356840e-50 | -8.615850e-47 |
| Msa1095470 | Msa1375940 | 0.834897 | 2.297326e-56 | -8.615850e-47 |
| Msa1097850 | Msa1375940 | 0.837364 | 5.431019e-57 | -8.615850e-47 |
| Msa1100490 | Msa1375940 | 0.803028 | 4.237536e-49 | -8.615850e-47 |
| Msa1106560 | Msa1375940 | 0.851289 | 9.781692e-61 | -8.615850e-47 |
| Msa1106810 | Msa1375940 | 0.828622 | 8.114355e-55 | -8.615850e-47 |
| Msa0239660 | Msa1375940 | 0.828560 | 8.402537e-55 | -8.615850e-47 |
| Msa0246690 | Msa1375940 | 0.843987 | 9.988077e-59 | -8.615850e-47 |
| Msa0257130 | Msa1375940 | 0.808343 | 3.245714e-50 | -8.615850e-47 |
| Msa0257310 | Msa1375940 | 0.828130 | 1.066929e-54 | -8.615850e-47 |
| Msa0259980 | Msa1375940 | 0.800972 | 1.121664e-48 | -8.615850e-47 |
| Msa0267760 | Msa1375940 | 0.826026 | 3.398966e-54 | -8.615850e-47 |
| Msa0274780 | Msa1375940 | 0.835518 | 1.601967e-56 | -8.615850e-47 |
| Msa0277640 | Msa1375940 | 0.817282 | 3.574844e-52 | -8.615850e-47 |
| Msa0280490 | Msa1375940 | 0.807653 | 4.550365e-50 | -8.615850e-47 |
| Msa0280900 | Msa1375940 | 0.829449 | 5.116658e-55 | -8.615850e-47 |
| Msa0284780 | Msa1375940 | 0.815795 | 7.699195e-52 | -8.615850e-47 |
| Msa0296610 | Msa1375940 | 0.813643 | 2.307685e-51 | -8.615850e-47 |
| Msa0298940 | Msa1375940 | 0.800578 | 1.349296e-48 | -8.615850e-47 |
| Msa0298970 | Msa1375940 | 0.817259 | 3.618361e-52 | -8.615850e-47 |
| Msa0301180 | Msa1375940 | 0.822247 | 2.623151e-53 | -8.615850e-47 |
| Msa0314790 | Msa1375940 | 0.820174 | 7.883678e-53 | -8.615850e-47 |
| Msa0315480 | Msa1375940 | 0.838860 | 2.237105e-57 | -8.615850e-47 |
| Msa0317260 | Msa1375940 | 0.842757 | 2.127641e-58 | -8.615850e-47 |
| Msa0320540 | Msa1375940 | 0.812424 | 4.269951e-51 | -8.615850e-47 |
| Msa0323990 | Msa1375940 | 0.811179 | 7.970043e-51 | -8.615850e-47 |
| Msa0339860 | Msa1375940 | 0.830548 | 2.759845e-55 | -8.615850e-47 |
| Msa0344070 | Msa1375940 | 0.806330 | 8.667915e-50 | -8.615850e-47 |
| Msa1112610 | Msa1375940 | 0.832064 | 1.169774e-55 | -8.615850e-47 |
| Msa1125780 | Msa1375940 | 0.817660 | 2.938018e-52 | -8.615850e-47 |
| Msa1125950 | Msa1375940 | 0.817189 | 3.752076e-52 | -8.615850e-47 |
| Msa1134400 | Msa1375940 | 0.827132 | 1.852416e-54 | -8.615850e-47 |
| Msa1135690 | Msa1375940 | 0.814584 | 1.430044e-51 | -8.615850e-47 |
| Msa1135870 | Msa1375940 | 0.818306 | 2.099761e-52 | -8.615850e-47 |
| Msa1149760 | Msa1375940 | 0.829976 | 3.807096e-55 | -8.615850e-47 |
| Msa1150230 | Msa1375940 | 0.808005 | 3.829291e-50 | -8.615850e-47 |
| Msa1159100 | Msa1375940 | 0.839211 | 1.815244e-57 | -8.615850e-47 |
| Msa1159990 | Msa1375940 | 0.814325 | 1.632155e-51 | -8.615850e-47 |
| Msa1160400 | Msa1375940 | 0.807225 | 5.607660e-50 | -8.615850e-47 |
| Msa1171340 | Msa1375940 | 0.821242 | 4.479714e-53 | -8.615850e-47 |
| Msa1171690 | Msa1375940 | 0.819815 | 9.524930e-53 | -8.615850e-47 |
| Msa1183390 | Msa1375940 | 0.842407 | 2.635240e-58 | -8.615850e-47 |
| Msa1188940 | Msa1375940 | 0.807766 | 4.305234e-50 | -8.615850e-47 |
| Msa1197110 | Msa1375940 | 0.828796 | 7.367023e-55 | -8.615850e-47 |
| Msa1200920 | Msa1375940 | 0.820212 | 7.729746e-53 | -8.615850e-47 |
| Msa1220450 | Msa1375940 | -0.831268 | 1.838056e-55 | -8.615850e-47 |
| Msa1220460 | Msa1375940 | -0.826066 | 3.326137e-54 | -8.615850e-47 |
| Msa1220480 | Msa1375940 | -0.826307 | 2.914226e-54 | -8.615850e-47 |
| Msa1223460 | Msa1375940 | 0.805929 | 1.053064e-49 | -8.615850e-47 |
| Msa1223840 | Msa1375940 | 0.832992 | 6.886711e-56 | -8.615850e-47 |
| Msa0484690 | Msa1375940 | 0.815730 | 7.960763e-52 | -8.615850e-47 |
| Msa0485280 | Msa1375940 | 0.816610 | 5.060312e-52 | -8.615850e-47 |
| Msa0490300 | Msa1375940 | 0.833439 | 5.328899e-56 | -8.615850e-47 |
| Msa0504730 | Msa1375940 | 0.815679 | 8.171505e-52 | -8.615850e-47 |
| Msa0509970 | Msa1375940 | 0.808969 | 2.384464e-50 | -8.615850e-47 |
| Msa0510960 | Msa1375940 | 0.832094 | 1.150276e-55 | -8.615850e-47 |
| Msa0511870 | Msa1375940 | 0.830606 | 2.671485e-55 | -8.615850e-47 |
| Msa0524090 | Msa1375940 | 0.801915 | 7.188585e-49 | -8.615850e-47 |
| Msa0524120 | Msa1375940 | 0.821001 | 5.091647e-53 | -8.615850e-47 |
| Msa0526700 | Msa1375940 | 0.817302 | 3.537786e-52 | -8.615850e-47 |
| Msa0526710 | Msa1375940 | 0.821596 | 3.712188e-53 | -8.615850e-47 |
| Msa0527590 | Msa1375940 | 0.820385 | 7.052040e-53 | -8.615850e-47 |
| Msa0527600 | Msa1375940 | 0.814282 | 1.667722e-51 | -8.615850e-47 |
| Msa0532840 | Msa1375940 | 0.842352 | 2.725804e-58 | -8.615850e-47 |
| Msa0533010 | Msa1375940 | 0.840976 | 6.284113e-58 | -8.615850e-47 |
| Msa0535030 | Msa1375940 | 0.825811 | 3.823752e-54 | -8.615850e-47 |
| Msa0535060 | Msa1375940 | 0.822152 | 2.759454e-53 | -8.615850e-47 |
| Msa0538570 | Msa1375940 | 0.802154 | 6.419968e-49 | -8.615850e-47 |
| Msa0546380 | Msa1375940 | 0.856124 | 3.976783e-62 | -8.615850e-47 |
| Msa0546740 | Msa1375940 | 0.814859 | 1.243230e-51 | -8.615850e-47 |
| Msa0546840 | Msa1375940 | 0.825046 | 5.804318e-54 | -8.615850e-47 |
| Msa0550110 | Msa1375940 | 0.801161 | 1.026086e-48 | -8.615850e-47 |
| Msa0557630 | Msa1375940 | 0.801407 | 9.136441e-49 | -8.615850e-47 |
| Msa0561510 | Msa1375940 | 0.804324 | 2.281602e-49 | -8.615850e-47 |
| Msa0564930 | Msa1375940 | 0.816178 | 6.322482e-52 | -8.615850e-47 |
| Msa0574170 | Msa1375940 | 0.813677 | 2.267946e-51 | -8.615850e-47 |
| Msa0575250 | Msa1375940 | 0.800681 | 1.285622e-48 | -8.615850e-47 |
| Msa0576420 | Msa1375940 | 0.820309 | 7.340931e-53 | -8.615850e-47 |
| Msa0578900 | Msa1375940 | 0.816635 | 4.994879e-52 | -8.615850e-47 |
| Msa0581460 | Msa1375940 | 0.857244 | 1.862193e-62 | -8.615850e-47 |
| Msa0583790 | Msa1375940 | 0.811057 | 8.469188e-51 | -8.615850e-47 |
| Msa0591770 | Msa1375940 | 0.805940 | 1.047272e-49 | -8.615850e-47 |
| Msa0594390 | Msa1375940 | 0.800355 | 1.498689e-48 | -8.615850e-47 |
| Msa0844530 | Msa1375940 | 0.843035 | 1.794582e-58 | -8.615850e-47 |
| Msa0852730 | Msa1375940 | 0.809590 | 1.755484e-50 | -8.615850e-47 |
| Msa0854570 | Msa1375940 | 0.829566 | 4.791588e-55 | -8.615850e-47 |
| Msa0854590 | Msa1375940 | 0.810803 | 9.613496e-51 | -8.615850e-47 |
| Msa0855020 | Msa1375940 | 0.801324 | 9.502943e-49 | -8.615850e-47 |
| Msa0872310 | Msa1375940 | 0.811008 | 8.678770e-51 | -8.615850e-47 |
| Msa0873190 | Msa1375940 | 0.817343 | 3.464149e-52 | -8.615850e-47 |
| Msa0889740 | Msa1375940 | 0.818040 | 2.411469e-52 | -8.615850e-47 |
| Msa0890250 | Msa1375940 | 0.825522 | 4.478421e-54 | -8.615850e-47 |
| Msa0903330 | Msa1375940 | 0.815933 | 7.171360e-52 | -8.615850e-47 |
| Msa0905550 | Msa1375940 | 0.805979 | 1.027522e-49 | -8.615850e-47 |
| Msa0906370 | Msa1375940 | 0.828395 | 9.205398e-55 | -8.615850e-47 |
| Msa0907700 | Msa1375940 | 0.819534 | 1.104047e-52 | -8.615850e-47 |
| Msa0925160 | Msa1375940 | 0.849704 | 2.725121e-60 | -8.615850e-47 |
| Msa0930330 | Msa1375940 | 0.822140 | 2.778388e-53 | -8.615850e-47 |
| Msa0931480 | Msa1375940 | 0.800823 | 1.202629e-48 | -8.615850e-47 |
| Msa0937550 | Msa1375940 | 0.807050 | 6.107475e-50 | -8.615850e-47 |
| Msa0938430 | Msa1375940 | 0.818803 | 1.620030e-52 | -8.615850e-47 |
| Msa0955260 | Msa1375940 | 0.837581 | 4.775813e-57 | -8.615850e-47 |
| Msa0958020 | Msa1375940 | 0.826290 | 2.942103e-54 | -8.615850e-47 |
| Msa0974750 | Msa1375940 | 0.802857 | 4.596711e-49 | -8.615850e-47 |
| Msa0975580 | Msa1375940 | 0.806217 | 9.158738e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375940 | MtrunA17_Chr4g0071891 | 88.024 | 334 | 37 | 2 | 52 | 384 | 7 | 338 | 0.0 | 610 |
| Msa1375940 | MtrunA17_Chr2g0298561 | 68.421 | 380 | 116 | 3 | 5 | 384 | 7 | 382 | 0.0 | 533 |
| Msa1375940 | MtrunA17_Chr2g0298571 | 64.844 | 384 | 128 | 4 | 2 | 384 | 7 | 384 | 4.54e-180 | 505 |
| Msa1375940 | MtrunA17_Chr4g0071881 | 62.402 | 383 | 139 | 4 | 2 | 381 | 13 | 393 | 1.20e-170 | 482 |
| Msa1375940 | MtrunA17_Chr4g0031691 | 27.035 | 344 | 208 | 12 | 44 | 361 | 78 | 404 | 7.31e-21 | 94.0 |
| Msa1375940 | MtrunA17_Chr7g0238731 | 27.273 | 341 | 211 | 13 | 44 | 361 | 82 | 408 | 6.32e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1375940 | AT5G57240.2 | 50.781 | 384 | 181 | 4 | 1 | 383 | 1 | 377 | 5.23e-137 | 396 |
| Msa1375940 | AT5G57240.5 | 50.781 | 384 | 181 | 4 | 1 | 383 | 1 | 377 | 5.23e-137 | 396 |
| Msa1375940 | AT5G57240.1 | 50.781 | 384 | 181 | 4 | 1 | 383 | 1 | 377 | 5.23e-137 | 396 |
| Msa1375940 | AT4G25850.1 | 52.219 | 383 | 175 | 4 | 1 | 382 | 6 | 381 | 1.69e-136 | 395 |
| Msa1375940 | AT4G25850.2 | 52.219 | 383 | 175 | 4 | 1 | 382 | 108 | 483 | 6.29e-135 | 395 |
| Msa1375940 | AT5G57240.4 | 47.677 | 409 | 181 | 5 | 1 | 383 | 1 | 402 | 3.84e-131 | 382 |
| Msa1375940 | AT5G57240.3 | 47.677 | 409 | 181 | 5 | 1 | 383 | 1 | 402 | 3.84e-131 | 382 |
| Msa1375940 | AT4G25860.2 | 49.608 | 383 | 185 | 4 | 1 | 382 | 1 | 376 | 1.60e-127 | 372 |
| Msa1375940 | AT4G25860.1 | 49.608 | 383 | 185 | 4 | 1 | 382 | 7 | 382 | 2.14e-127 | 372 |
| Msa1375940 | AT4G25850.3 | 52.985 | 268 | 119 | 3 | 1 | 267 | 6 | 267 | 4.47e-91 | 275 |
| Msa1375940 | AT5G59420.1 | 26.531 | 343 | 209 | 12 | 44 | 360 | 77 | 402 | 9.66e-18 | 85.1 |
| Msa1375940 | AT5G02100.2 | 27.801 | 241 | 144 | 11 | 44 | 272 | 77 | 299 | 4.04e-14 | 73.2 |
Find 117 sgRNAs with CRISPR-Local
Find 269 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGAGTCAAAAGGGGAAATT+TGG | 0.145591 | tig0019775:-14629 | Msa1375940:CDS |
| AGTACTTGCTGTAATGTATT+TGG | 0.169490 | tig0019775:+17945 | None:intergenic |
| CCACCCTATAATTATTTATC+TGG | 0.183577 | tig0019775:-14518 | Msa1375940:exon |
| ACTACACGACCACAGAAATT+TGG | 0.188123 | tig0019775:-17497 | Msa1375940:CDS |
| AACAGAATCTGCTCTTGTTT+GGG | 0.210716 | tig0019775:-14748 | Msa1375940:CDS |
| AGACAATCTTTCTTTGGATT+TGG | 0.216954 | tig0019775:-15478 | Msa1375940:CDS |
| CCACCTACCTTGTTTATAAA+TGG | 0.221520 | tig0019775:-18237 | Msa1375940:intron |
| AGAAATCTGAATAAGAAATT+TGG | 0.242852 | tig0019775:+15583 | None:intergenic |
| CAACAGAATCTGCTCTTGTT+TGG | 0.245208 | tig0019775:-14749 | Msa1375940:CDS |
| CTGCTACCAGGCCTGTTTCT+AGG | 0.260032 | tig0019775:+15515 | None:intergenic |
| GCTCCCTACAATCCCATTCT+TGG | 0.262230 | tig0019775:-17470 | Msa1375940:CDS |
| TTCCAATTCCTGGTATTGAT+TGG | 0.273123 | tig0019775:-15561 | Msa1375940:CDS |
| TACACTAGACAATCTTTCTT+TGG | 0.278088 | tig0019775:-15484 | Msa1375940:CDS |
| CATATGTCTCTCCATGATTA+TGG | 0.281131 | tig0019775:+15617 | None:intergenic |
| GGAAATCGAAGACGGATAAA+AGG | 0.297030 | tig0019775:-15451 | Msa1375940:CDS |
| GACAATCTTTCTTTGGATTT+GGG | 0.297690 | tig0019775:-15477 | Msa1375940:CDS |
| TTCAGATTTCTTCCAATTCC+TGG | 0.299189 | tig0019775:-15571 | Msa1375940:CDS |
| ATAAAGTTCTAAATGCTTGC+AGG | 0.314021 | tig0019775:-18337 | Msa1375940:five_prime_UTR |
| AGATCCAGATAAATAATTAT+AGG | 0.317722 | tig0019775:+14514 | None:intergenic |
| TTTATAACATTGACGGTCAT+TGG | 0.319680 | tig0019775:-15396 | Msa1375940:CDS |
| TCCAATTCCTGGTATTGATT+GGG | 0.344320 | tig0019775:-15560 | Msa1375940:CDS |
| GATCCTTAACAAAAGGAGTA+TGG | 0.346607 | tig0019775:+14972 | None:intergenic |
| ATCTGATCTGTCACGCTTCA+AGG | 0.378726 | tig0019775:-17895 | Msa1375940:intron |
| TCCCCAATCGTTGCTTATGA+TGG | 0.379990 | tig0019775:+14710 | None:intergenic |
| AGGGTGGCAATAGGAGCATC+TGG | 0.384339 | tig0019775:+14534 | None:intergenic |
| GATCCAGATAAATAATTATA+GGG | 0.385472 | tig0019775:+14515 | None:intergenic |
| ACCCAATCAATACCAGGAAT+TGG | 0.388589 | tig0019775:+15559 | None:intergenic |
| AAGAGAAGTAAGTAAGGATA+AGG | 0.410294 | tig0019775:-18289 | Msa1375940:five_prime_UTR |
| AATAATTATAGGGTGGCAAT+AGG | 0.420289 | tig0019775:+14525 | None:intergenic |
| TCTCCACTTCCAAAGTTTGT+TGG | 0.426253 | tig0019775:-15830 | Msa1375940:intron |
| ACTATCCGGTGCCTAGAAAC+AGG | 0.426852 | tig0019775:-15526 | Msa1375940:CDS |
| TGAGTCACTATAAAATGTTT+AGG | 0.427110 | tig0019775:+14603 | None:intergenic |
| CGAGGAAAGAGAAGTAAGTA+AGG | 0.427797 | tig0019775:-18295 | Msa1375940:five_prime_UTR |
| ACAGTTCCAGCCATCTTCAT+TGG | 0.435258 | tig0019775:+14578 | None:intergenic |
| AATGTTCTTTATAACATTGA+CGG | 0.438522 | tig0019775:-15403 | Msa1375940:CDS |
| TTATAACATTGACGGTCATT+GGG | 0.448664 | tig0019775:-15395 | Msa1375940:CDS |
| TGTCAAGCAACCAGACCAAT+TGG | 0.448880 | tig0019775:-14401 | Msa1375940:three_prime_UTR |
| ATGGTGGGTTTCACCAAGAA+TGG | 0.451451 | tig0019775:+17457 | None:intergenic |
| TTAGAGAAAGAGAGTCAAAA+GGG | 0.454350 | tig0019775:-14638 | Msa1375940:CDS |
| AGCCATCATAAGCAACGATT+GGG | 0.455090 | tig0019775:-14712 | Msa1375940:CDS |
| AGAGTCAAAAGGGGAAATTT+GGG | 0.456782 | tig0019775:-14628 | Msa1375940:CDS |
| AATCGTTGCTTATGATGGCT+TGG | 0.457816 | tig0019775:+14715 | None:intergenic |
| CTTAGAGAAAGAGAGTCAAA+AGG | 0.461372 | tig0019775:-14639 | Msa1375940:CDS |
| CCTTAACGTCTTGCTCGAAC+AGG | 0.465737 | tig0019775:-17420 | Msa1375940:intron |
| TCTTTCTTTGGATTTGGGTC+GGG | 0.467324 | tig0019775:-15472 | Msa1375940:CDS |
| ATCTTTCTTTGGATTTGGGT+CGG | 0.469873 | tig0019775:-15473 | Msa1375940:CDS |
| AATTAATATGATAAACATGT+TGG | 0.473006 | tig0019775:-14427 | Msa1375940:three_prime_UTR |
| TAAGTCTCTTCAAGAATGTT+CGG | 0.473557 | tig0019775:-17923 | Msa1375940:CDS |
| ACCTCTAGATCCTTAACAAA+AGG | 0.474417 | tig0019775:+14965 | None:intergenic |
| CAAGTCTACTCCTGTGGCTG+TGG | 0.475561 | tig0019775:+17589 | None:intergenic |
| TACCATTGAAGCTGTGACTT+AGG | 0.485158 | tig0019775:+17629 | None:intergenic |
| TTCACCAAGAATGGGATTGT+AGG | 0.487044 | tig0019775:+17466 | None:intergenic |
| TAGTTGAATATGAATATTGA+TGG | 0.493015 | tig0019775:+18261 | None:intergenic |
| CTCTTCAAGAATGTTCGGTT+AGG | 0.494318 | tig0019775:-17918 | Msa1375940:CDS |
| GAAACCCACCATGTTTCTAA+AGG | 0.495301 | tig0019775:-17446 | Msa1375940:CDS |
| AAACCCACCATGTTTCTAAA+GGG | 0.496469 | tig0019775:-17445 | Msa1375940:CDS |
| TTACCAACAAACTTTGGAAG+TGG | 0.498053 | tig0019775:+15827 | None:intergenic |
| TGGTGGGTTTCACCAAGAAT+GGG | 0.499357 | tig0019775:+17458 | None:intergenic |
| GCAGGTTTCACACCATCCTC+AGG | 0.503834 | tig0019775:-15909 | Msa1375940:intron |
| CTGTGACTTAGGCATGTTGA+AGG | 0.504962 | tig0019775:+17640 | None:intergenic |
| CCTGTTCGAGCAAGACGTTA+AGG | 0.505938 | tig0019775:+17420 | None:intergenic |
| AAGCCATCATAAGCAACGAT+TGG | 0.513927 | tig0019775:-14713 | Msa1375940:CDS |
| TCACCAAGAATGGGATTGTA+GGG | 0.514686 | tig0019775:+17467 | None:intergenic |
| CTCATACCAATGAAGATGGC+TGG | 0.515393 | tig0019775:-14584 | Msa1375940:CDS |
| CAACTGCACCTCCATAATCA+TGG | 0.525416 | tig0019775:-15628 | Msa1375940:CDS |
| TGCCTAAGTCACAGCTTCAA+TGG | 0.525691 | tig0019775:-17631 | Msa1375940:CDS |
| AAGTCACAGCTTCAATGGTA+TGG | 0.534057 | tig0019775:-17626 | Msa1375940:CDS |
| GGGTTGGCAATGTCACTATC+CGG | 0.534777 | tig0019775:-15540 | Msa1375940:CDS |
| AACAAATCATCGGATTCTGA+TGG | 0.535295 | tig0019775:-17981 | Msa1375940:CDS |
| GAAATCGAAGACGGATAAAA+GGG | 0.537567 | tig0019775:-15450 | Msa1375940:CDS |
| TGTGTATATTCCACAGCCAC+AGG | 0.543811 | tig0019775:-17599 | Msa1375940:CDS |
| ACTGTTCACCAATTCAAAAG+TGG | 0.544922 | tig0019775:-14560 | Msa1375940:CDS |
| GTGACTCATACCAATGAAGA+TGG | 0.549751 | tig0019775:-14588 | Msa1375940:CDS |
| ATTCCTGGTATTGATTGGGT+TGG | 0.551107 | tig0019775:-15556 | Msa1375940:CDS |
| GACTTATATCAGTTGTAGCA+TGG | 0.557193 | tig0019775:-17529 | Msa1375940:CDS |
| ACAGAATCTGCTCTTGTTTG+GGG | 0.557754 | tig0019775:-14747 | Msa1375940:CDS |
| ACAAATCATCGGATTCTGAT+GGG | 0.561719 | tig0019775:-17980 | Msa1375940:CDS |
| ACATTGACGGTCATTGGGAT+AGG | 0.562966 | tig0019775:-15390 | Msa1375940:intron |
| TGTAGCTCAATTCTGCTACC+AGG | 0.567744 | tig0019775:+15503 | None:intergenic |
| TTTCCATCTGATCAGTGGCA+TGG | 0.571356 | tig0019775:+15876 | None:intergenic |
| CCAGGCCTGTTTCTAGGCAC+CGG | 0.578301 | tig0019775:+15521 | None:intergenic |
| AAATTATAAATGCAGGTACA+GGG | 0.580423 | tig0019775:-15678 | Msa1375940:intron |
| TAAGGTTCCCTTTAGAAACA+TGG | 0.582927 | tig0019775:+17438 | None:intergenic |
| AGTTGAATATGAATATTGAT+GGG | 0.587634 | tig0019775:+18262 | None:intergenic |
| AATAGACAACAACAAATCAT+CGG | 0.591062 | tig0019775:-17991 | Msa1375940:CDS |
| ATTCCATGCCACTGATCAGA+TGG | 0.593014 | tig0019775:-15879 | Msa1375940:CDS |
| GTTTAGCAAGTCTACTCCTG+TGG | 0.609510 | tig0019775:+17583 | None:intergenic |
| TTGTTGTCTATTGTTGCGAG+TGG | 0.612182 | tig0019775:+18002 | None:intergenic |
| CCGGTGCCTAGAAACAGGCC+TGG | 0.615502 | tig0019775:-15521 | Msa1375940:CDS |
| CTGTTCACCAATTCAAAAGT+GGG | 0.616115 | tig0019775:-14559 | Msa1375940:CDS |
| GTTCCCTTTAGAAACATGGT+GGG | 0.616437 | tig0019775:+17442 | None:intergenic |
| CAAACAAGAGCAGATTCTGT+TGG | 0.621500 | tig0019775:+14750 | None:intergenic |
| CGATTGGGGAAAAGCAAGAG+AGG | 0.622181 | tig0019775:-14697 | Msa1375940:CDS |
| TTGCTAAACAACATCAACAA+TGG | 0.626138 | tig0019775:-17569 | Msa1375940:CDS |
| GGGTGGCAATAGGAGCATCT+GGG | 0.627495 | tig0019775:+14535 | None:intergenic |
| GGTTCCCTTTAGAAACATGG+TGG | 0.629919 | tig0019775:+17441 | None:intergenic |
| GGGGTAGAAGTTGACATGCA+TGG | 0.630449 | tig0019775:-15658 | Msa1375940:CDS |
| AAGAGAGGCAAAGAACACTC+TGG | 0.634477 | tig0019775:-14682 | Msa1375940:CDS |
| CAAACTTTGGAAGTGGAGAG+TGG | 0.635431 | tig0019775:+15834 | None:intergenic |
| TTGCCAACCCAATCAATACC+AGG | 0.642684 | tig0019775:+15553 | None:intergenic |
| TTGGGTCGGGAAATCGAAGA+CGG | 0.645859 | tig0019775:-15459 | Msa1375940:CDS |
| CCAGATAAATAATTATAGGG+TGG | 0.646503 | tig0019775:+14518 | None:intergenic |
| TTAGGCATGTTGAAGGTAGG+TGG | 0.647292 | tig0019775:+17647 | None:intergenic |
| GTACCATTTATAAACAAGGT+AGG | 0.648055 | tig0019775:+18234 | None:intergenic |
| ATGTCTCTCCATGATTATGG+AGG | 0.650308 | tig0019775:+15620 | None:intergenic |
| GCCATCATAAGCAACGATTG+GGG | 0.655456 | tig0019775:-14711 | Msa1375940:CDS |
| GACTTAGGCATGTTGAAGGT+AGG | 0.658758 | tig0019775:+17644 | None:intergenic |
| TTTGTGTTCTGAAGTTTGCG+AGG | 0.659527 | tig0019775:-18313 | Msa1375940:five_prime_UTR |
| AATTATAAATGCAGGTACAG+GGG | 0.662926 | tig0019775:-15677 | Msa1375940:intron |
| TAGAGAAAGAGAGTCAAAAG+GGG | 0.666484 | tig0019775:-14637 | Msa1375940:CDS |
| GGAGCAAATCCAAATTTCTG+TGG | 0.677683 | tig0019775:+17488 | None:intergenic |
| AGAGGCAAAGAACACTCTGG+AGG | 0.685308 | tig0019775:-14679 | Msa1375940:CDS |
| CCATTTATAAACAAGGTAGG+TGG | 0.690526 | tig0019775:+18237 | None:intergenic |
| GAACGTACCATTTATAAACA+AGG | 0.693899 | tig0019775:+18230 | None:intergenic |
| GGAATGCAGATACCTGAGGA+TGG | 0.705504 | tig0019775:+15897 | None:intergenic |
| ACACTCTGGAGGAAACTCAG+AGG | 0.724153 | tig0019775:-14668 | Msa1375940:CDS |
| GCATGGAATGCAGATACCTG+AGG | 0.732347 | tig0019775:+15893 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTAAATTTAAAGTGATAA+TGG | + | tig0019775:15679-15698 | None:intergenic | 10.0% |
| !!! | AAAAAGAATTTTTTTTTCTT+AGG | - | tig0019775:15785-15804 | Msa1375940:intron | 10.0% |
| !!! | TTTTATTATTATTGATTTTG+AGG | + | tig0019775:17025-17044 | None:intergenic | 10.0% |
| !! | TAATTACGTAAATAATATAT+AGG | + | tig0019775:17613-17632 | None:intergenic | 10.0% |
| !! | ATATATACAATATATCTTTC+TGG | - | tig0019775:14517-14536 | Msa1375940:exon | 15.0% |
| !! | TATCTCATAATGTATTTATT+TGG | - | tig0019775:14614-14633 | Msa1375940:CDS | 15.0% |
| !! | TCAATAAAAATATATGGATT+AGG | + | tig0019775:14989-15008 | None:intergenic | 15.0% |
| !! | AATTGGTCAATAAAAATATA+TGG | + | tig0019775:14995-15014 | None:intergenic | 15.0% |
| !!! | TTTGTATTTTGTTTAAAACT+TGG | - | tig0019775:15408-15427 | Msa1375940:CDS | 15.0% |
| !!! | TATTTTGCTGTTATTTATTT+TGG | - | tig0019775:15647-15666 | Msa1375940:CDS | 15.0% |
| !! | ACTAGTTAAAGATTAAAAAA+TGG | + | tig0019775:15877-15896 | None:intergenic | 15.0% |
| !!! | ATATGATTCAATTTTAGATA+TGG | - | tig0019775:16345-16364 | Msa1375940:intron | 15.0% |
| !!! | ACAAGAATTATAATTTTAAG+TGG | + | tig0019775:16396-16415 | None:intergenic | 15.0% |
| !! | ACTTAAAATTATAATTCTTG+TGG | - | tig0019775:16395-16414 | Msa1375940:intron | 15.0% |
| !! | ATATTATATTTGCACATATT+GGG | + | tig0019775:16466-16485 | None:intergenic | 15.0% |
| !! | ATAAAACAAATTATAAATGC+AGG | - | tig0019775:17039-17058 | Msa1375940:intron | 15.0% |
| !!! | ATTTTATATGATTAGGATTT+AGG | + | tig0019775:17647-17666 | None:intergenic | 15.0% |
| !! | AAAAATGATAAAGGATATAA+AGG | + | tig0019775:17861-17880 | None:intergenic | 15.0% |
| !! | TCACATTAAAAAAATGATAA+AGG | + | tig0019775:17870-17889 | None:intergenic | 15.0% |
| !! | AATTAATATGATAAACATGT+TGG | - | tig0019775:18297-18316 | Msa1375940:five_prime_UTR | 15.0% |
| !! | AGTTGAATATGAATATTGAT+GGG | + | tig0019775:14465-14484 | None:intergenic | 20.0% |
| !! | TAGTTGAATATGAATATTGA+TGG | + | tig0019775:14466-14485 | None:intergenic | 20.0% |
| !! | AAATAAAATTCAAGATGGAT+CGG | + | tig0019775:14547-14566 | None:intergenic | 20.0% |
| !! | TGATGAAATAAAATTCAAGA+TGG | + | tig0019775:14552-14571 | None:intergenic | 20.0% |
| !! | AAATACATTATGAGATACAT+TGG | + | tig0019775:14611-14630 | None:intergenic | 20.0% |
| !! | AGATCAAATGTAAATTTCAT+AGG | + | tig0019775:14890-14909 | None:intergenic | 20.0% |
| !!! | AGTTTTGTTCTAACTTTAAA+TGG | + | tig0019775:15494-15513 | None:intergenic | 20.0% |
| !!! | AGATTTTAGGTTCAATTTTA+TGG | + | tig0019775:15548-15567 | None:intergenic | 20.0% |
| !! | AATAACAGCAAAATACATAA+AGG | + | tig0019775:15642-15661 | None:intergenic | 20.0% |
| !! | AATCTTTAACTAGTATCTTA+AGG | - | tig0019775:15883-15902 | Msa1375940:CDS | 20.0% |
| !! | TACTTATTATCTTTGATATG+AGG | - | tig0019775:16047-16066 | Msa1375940:intron | 20.0% |
| !! | AATTAATTTCGATACTTCAT+GGG | + | tig0019775:16178-16197 | None:intergenic | 20.0% |
| !! | AAATTAATTTCGATACTTCA+TGG | + | tig0019775:16179-16198 | None:intergenic | 20.0% |
| !! | CATATTATATTTGCACATAT+TGG | + | tig0019775:16467-16486 | None:intergenic | 20.0% |
| !! | CAATATGTGCAAATATAATA+TGG | - | tig0019775:16465-16484 | Msa1375940:intron | 20.0% |
| !!! | TATGCGATTCTTTTTAATTT+AGG | + | tig0019775:16668-16687 | None:intergenic | 20.0% |
| !!! | ATTATTATTGATTTTGAGGA+TGG | + | tig0019775:17021-17040 | None:intergenic | 20.0% |
| !! | AGAAATCTGAATAAGAAATT+TGG | + | tig0019775:17144-17163 | None:intergenic | 20.0% |
| !! | AATGTTCTTTATAACATTGA+CGG | - | tig0019775:17321-17340 | Msa1375940:intron | 20.0% |
| !!! | CAGCATTATTTTATATGATT+AGG | + | tig0019775:17654-17673 | None:intergenic | 20.0% |
| !! | GATCCAGATAAATAATTATA+GGG | + | tig0019775:18212-18231 | None:intergenic | 20.0% |
| !! | AGATCCAGATAAATAATTAT+AGG | + | tig0019775:18213-18232 | None:intergenic | 20.0% |
| ! | TATTTGTGTATTTGTAATGC+AGG | - | tig0019775:14676-14695 | Msa1375940:CDS | 25.0% |
| ! | AATAGACAACAACAAATCAT+CGG | - | tig0019775:14733-14752 | Msa1375940:CDS | 25.0% |
| ! | AAATTTACATTTGATCTGCT+GGG | - | tig0019775:14893-14912 | Msa1375940:intron | 25.0% |
| ! | AAACAACTAAGTTAAAAGAC+CGG | + | tig0019775:15387-15406 | None:intergenic | 25.0% |
| ! | TTAAGATGTATCAACATTGT+AGG | - | tig0019775:15701-15720 | Msa1375940:intron | 25.0% |
| ! | CCTTTATTGTATAAGTGATA+GGG | + | tig0019775:15740-15759 | None:intergenic | 25.0% |
| ! | CCTATCACTTATACAATAAA+GGG | - | tig0019775:15738-15757 | Msa1375940:intron | 25.0% |
| ! | GTATCTTAAGGAAAATTGTT+AGG | - | tig0019775:15895-15914 | Msa1375940:CDS | 25.0% |
| !! | ATAAATGCTTATGCTTTGAA+GGG | - | tig0019775:15929-15948 | Msa1375940:intron | 25.0% |
| !!! | TTAATTTGTTTATACGACCA+TGG | - | tig0019775:15957-15976 | Msa1375940:intron | 25.0% |
| ! | ATTATAATTCTTGTGGATGA+AGG | - | tig0019775:16402-16421 | Msa1375940:intron | 25.0% |
| !!! | TTTTGTTTACCAACAAACTT+TGG | + | tig0019775:16906-16925 | None:intergenic | 25.0% |
| ! | AAATTATAAATGCAGGTACA+GGG | - | tig0019775:17046-17065 | Msa1375940:intron | 25.0% |
| ! | CAATATGAAATGTGCTAAAT+AGG | - | tig0019775:17565-17584 | Msa1375940:CDS | 25.0% |
| ! | ATCATATAAAATAATGCTGC+AGG | - | tig0019775:17655-17674 | Msa1375940:intron | 25.0% |
| ! | TCATATAAAATAATGCTGCA+GGG | - | tig0019775:17656-17675 | Msa1375940:intron | 25.0% |
| !! | CAATACCAAAACATGTTTTT+AGG | - | tig0019775:17831-17850 | Msa1375940:intron | 25.0% |
| ! | AAAATGAAAATGTTCATGCA+TGG | - | tig0019775:17889-17908 | Msa1375940:intron | 25.0% |
| ! | TGAGTCACTATAAAATGTTT+AGG | + | tig0019775:18124-18143 | None:intergenic | 25.0% |
| !! | ATAAAGTTCTAAATGCTTGC+AGG | - | tig0019775:14387-14406 | Msa1375940:three_prime_UTR | 30.0% |
| AAGAGAAGTAAGTAAGGATA+AGG | - | tig0019775:14435-14454 | Msa1375940:three_prime_UTR | 30.0% | |
| GTACCATTTATAAACAAGGT+AGG | + | tig0019775:14493-14512 | None:intergenic | 30.0% | |
| GAACGTACCATTTATAAACA+AGG | + | tig0019775:14497-14516 | None:intergenic | 30.0% | |
| TTTGAAAGTTGACCAAAAGA+AGG | + | tig0019775:14581-14600 | None:intergenic | 30.0% | |
| TGGATTTGAATTGTGAAAAC+CGG | - | tig0019775:14634-14653 | Msa1375940:CDS | 30.0% | |
| !!! | AGATTTTACAAGAAGTGTTC+CGG | + | tig0019775:14656-14675 | None:intergenic | 30.0% |
| !! | AGTACTTGCTGTAATGTATT+TGG | + | tig0019775:14782-14801 | None:intergenic | 30.0% |
| TAAGTCTCTTCAAGAATGTT+CGG | - | tig0019775:14801-14820 | Msa1375940:intron | 30.0% | |
| GAAATTTACATTTGATCTGC+TGG | - | tig0019775:14892-14911 | Msa1375940:intron | 30.0% | |
| TTGCTAAACAACATCAACAA+TGG | - | tig0019775:15155-15174 | Msa1375940:intron | 30.0% | |
| AACAACTAAGTTAAAAGACC+GGG | + | tig0019775:15386-15405 | None:intergenic | 30.0% | |
| CAATTCCACAACCAATTTAT+GGG | - | tig0019775:15465-15484 | Msa1375940:CDS | 30.0% | |
| AATTCCACAACCAATTTATG+GGG | - | tig0019775:15466-15485 | Msa1375940:CDS | 30.0% | |
| AGTTAGAACAAAACTCTGTA+TGG | - | tig0019775:15499-15518 | Msa1375940:CDS | 30.0% | |
| !!! | CAATTTTATGGTGTCGATTT+TGG | + | tig0019775:15536-15555 | None:intergenic | 30.0% |
| !!! | TGCGCTTTTTTCAAGATTTT+AGG | + | tig0019775:15561-15580 | None:intergenic | 30.0% |
| !! | ATTCATGCCAACTGTTTTAA+AGG | - | tig0019775:15588-15607 | Msa1375940:CDS | 30.0% |
| !! | TTCATGCCAACTGTTTTAAA+GGG | - | tig0019775:15589-15608 | Msa1375940:CDS | 30.0% |
| CCCTATCACTTATACAATAA+AGG | - | tig0019775:15737-15756 | Msa1375940:intron | 30.0% | |
| CCCTTTATTGTATAAGTGAT+AGG | + | tig0019775:15741-15760 | None:intergenic | 30.0% | |
| AAAGCATAAGCATTTATCGT+AGG | + | tig0019775:15926-15945 | None:intergenic | 30.0% | |
| GATAAATGCTTATGCTTTGA+AGG | - | tig0019775:15928-15947 | Msa1375940:intron | 30.0% | |
| ! | ATTTAGGATACGATACAACT+AGG | + | tig0019775:16652-16671 | None:intergenic | 30.0% |
| AAAGACAGTTAAATTTGTGC+AGG | - | tig0019775:16797-16816 | Msa1375940:intron | 30.0% | |
| !! | TTTTGAGGATGGAAAAGTTT+TGG | + | tig0019775:17010-17029 | None:intergenic | 30.0% |
| CAAATTATAAATGCAGGTAC+AGG | - | tig0019775:17045-17064 | Msa1375940:intron | 30.0% | |
| AATTATAAATGCAGGTACAG+GGG | - | tig0019775:17047-17066 | Msa1375940:intron | 30.0% | |
| TACACTAGACAATCTTTCTT+TGG | - | tig0019775:17240-17259 | Msa1375940:intron | 30.0% | |
| AGACAATCTTTCTTTGGATT+TGG | - | tig0019775:17246-17265 | Msa1375940:intron | 30.0% | |
| GACAATCTTTCTTTGGATTT+GGG | - | tig0019775:17247-17266 | Msa1375940:intron | 30.0% | |
| TTTATAACATTGACGGTCAT+TGG | - | tig0019775:17328-17347 | Msa1375940:intron | 30.0% | |
| TTATAACATTGACGGTCATT+GGG | - | tig0019775:17329-17348 | Msa1375940:intron | 30.0% | |
| !!! | ATGCAAAAGAAGTGTTTTCT+GGG | - | tig0019775:17727-17746 | Msa1375940:intron | 30.0% |
| ! | GATCACCTAAAAACATGTTT+TGG | + | tig0019775:17839-17858 | None:intergenic | 30.0% |
| !! | CACTCTAAAACAATACATCA+GGG | + | tig0019775:17949-17968 | None:intergenic | 30.0% |
| !! | ACACTCTAAAACAATACATC+AGG | + | tig0019775:17950-17969 | None:intergenic | 30.0% |
| TTAGAGAAAGAGAGTCAAAA+GGG | - | tig0019775:18086-18105 | Msa1375940:intron | 30.0% | |
| AATAATTATAGGGTGGCAAT+AGG | + | tig0019775:18202-18221 | None:intergenic | 30.0% | |
| CCAGATAAATAATTATAGGG+TGG | + | tig0019775:18209-18228 | None:intergenic | 30.0% | |
| CCACCCTATAATTATTTATC+TGG | - | tig0019775:18206-18225 | Msa1375940:intron | 30.0% | |
| CCATTTATAAACAAGGTAGG+TGG | + | tig0019775:14490-14509 | None:intergenic | 35.0% | |
| ! | CCACCTACCTTGTTTATAAA+TGG | - | tig0019775:14487-14506 | Msa1375940:three_prime_UTR | 35.0% |
| AAGTTGACCAAAAGAAGGTA+TGG | + | tig0019775:14576-14595 | None:intergenic | 35.0% | |
| AACAAATCATCGGATTCTGA+TGG | - | tig0019775:14743-14762 | Msa1375940:CDS | 35.0% | |
| ACAAATCATCGGATTCTGAT+GGG | - | tig0019775:14744-14763 | Msa1375940:CDS | 35.0% | |
| GACTTATATCAGTTGTAGCA+TGG | - | tig0019775:15195-15214 | Msa1375940:intron | 35.0% | |
| ! | AAACCCACCATGTTTCTAAA+GGG | - | tig0019775:15279-15298 | Msa1375940:intron | 35.0% |
| ! | TAAGGTTCCCTTTAGAAACA+TGG | + | tig0019775:15289-15308 | None:intergenic | 35.0% |
| TCCAATAACCGATTAATTCG+AGG | - | tig0019775:15438-15457 | Msa1375940:CDS | 35.0% | |
| CCAATAACCGATTAATTCGA+GGG | - | tig0019775:15439-15458 | Msa1375940:CDS | 35.0% | |
| ! | ATTGGTTCCCTCGAATTAAT+CGG | + | tig0019775:15449-15468 | None:intergenic | 35.0% |
| CCATAAATTGGTTGTGGAAT+TGG | + | tig0019775:15467-15486 | None:intergenic | 35.0% | |
| CCAATTCCACAACCAATTTA+TGG | - | tig0019775:15464-15483 | Msa1375940:CDS | 35.0% | |
| TTAAATGGAGCCCCATAAAT+TGG | + | tig0019775:15479-15498 | None:intergenic | 35.0% | |
| !!! | TTTATGGTGTCGATTTTGGT+TGG | + | tig0019775:15532-15551 | None:intergenic | 35.0% |
| ! | AATCTTGAAAAAAGCGCACT+CGG | - | tig0019775:15563-15582 | Msa1375940:CDS | 35.0% |
| !! | ATGAGACCCTTTAAAACAGT+TGG | + | tig0019775:15598-15617 | None:intergenic | 35.0% |
| TCAGGGTAATAGTCACATAT+GGG | - | tig0019775:15982-16001 | Msa1375940:intron | 35.0% | |
| TGGAATATCGGTATCTGATA+CGG | + | tig0019775:16141-16160 | None:intergenic | 35.0% | |
| GAAATATCTTTGCGTATCTG+TGG | + | tig0019775:16243-16262 | None:intergenic | 35.0% | |
| GTATCCTAGAAAAAGACGAA+GGG | - | tig0019775:16282-16301 | Msa1375940:intron | 35.0% | |
| ! | TTTACCCTTCGTCTTTTTCT+AGG | + | tig0019775:16289-16308 | None:intergenic | 35.0% |
| ! | TATGTTTTCCATCTGATCAG+TGG | + | tig0019775:16856-16875 | None:intergenic | 35.0% |
| ! | TTACCAACAAACTTTGGAAG+TGG | + | tig0019775:16900-16919 | None:intergenic | 35.0% |
| CATATGTCTCTCCATGATTA+TGG | + | tig0019775:17110-17129 | None:intergenic | 35.0% | |
| TTCAGATTTCTTCCAATTCC+TGG | - | tig0019775:17153-17172 | Msa1375940:intron | 35.0% | |
| !! | TTCCAATTCCTGGTATTGAT+TGG | - | tig0019775:17163-17182 | Msa1375940:intron | 35.0% |
| !! | TCCAATTCCTGGTATTGATT+GGG | - | tig0019775:17164-17183 | Msa1375940:intron | 35.0% |
| ATCTTTCTTTGGATTTGGGT+CGG | - | tig0019775:17251-17270 | Msa1375940:intron | 35.0% | |
| GAAATCGAAGACGGATAAAA+GGG | - | tig0019775:17274-17293 | Msa1375940:intron | 35.0% | |
| !! | GCATATATATCAAGCACTGA+CGG | - | tig0019775:17412-17431 | Msa1375940:intron | 35.0% |
| TGTCATATCAAGTGTCCATA+CGG | + | tig0019775:17438-17457 | None:intergenic | 35.0% | |
| TTTCATATTGAAGACGCATC+TGG | + | tig0019775:17555-17574 | None:intergenic | 35.0% | |
| !!! | GATGCAAAAGAAGTGTTTTC+TGG | - | tig0019775:17726-17745 | Msa1375940:intron | 35.0% |
| GATCCTTAACAAAAGGAGTA+TGG | + | tig0019775:17755-17774 | None:intergenic | 35.0% | |
| ! | TCCTTTTGTTAAGGATCTAG+AGG | - | tig0019775:17758-17777 | Msa1375940:intron | 35.0% |
| ACCTCTAGATCCTTAACAAA+AGG | + | tig0019775:17762-17781 | None:intergenic | 35.0% | |
| ! | AACAGAATCTGCTCTTGTTT+GGG | - | tig0019775:17976-17995 | Msa1375940:CDS | 35.0% |
| !! | CTTTTGACTCTCTTTCTCTA+AGG | + | tig0019775:18087-18106 | None:intergenic | 35.0% |
| CTTAGAGAAAGAGAGTCAAA+AGG | - | tig0019775:18085-18104 | Msa1375940:intron | 35.0% | |
| TAGAGAAAGAGAGTCAAAAG+GGG | - | tig0019775:18087-18106 | Msa1375940:intron | 35.0% | |
| AGAGTCAAAAGGGGAAATTT+GGG | - | tig0019775:18096-18115 | Msa1375940:intron | 35.0% | |
| ACTGTTCACCAATTCAAAAG+TGG | - | tig0019775:18164-18183 | Msa1375940:intron | 35.0% | |
| CTGTTCACCAATTCAAAAGT+GGG | - | tig0019775:18165-18184 | Msa1375940:intron | 35.0% | |
| !! | TACTTAGCTTTTGCACCAAT+TGG | + | tig0019775:18341-18360 | None:intergenic | 35.0% |
| !! | TTTGTGTTCTGAAGTTTGCG+AGG | - | tig0019775:14411-14430 | Msa1375940:three_prime_UTR | 40.0% |
| CGAGGAAAGAGAAGTAAGTA+AGG | - | tig0019775:14429-14448 | Msa1375940:three_prime_UTR | 40.0% | |
| ! | TCATCAGCCATACCTTCTTT+TGG | - | tig0019775:14566-14585 | Msa1375940:CDS | 40.0% |
| TTGTTGTCTATTGTTGCGAG+TGG | + | tig0019775:14725-14744 | None:intergenic | 40.0% | |
| CTCTTCAAGAATGTTCGGTT+AGG | - | tig0019775:14806-14825 | Msa1375940:intron | 40.0% | |
| TTACATTTGATCTGCTGGGA+TGG | - | tig0019775:14897-14916 | Msa1375940:intron | 40.0% | |
| TACATTTGATCTGCTGGGAT+GGG | - | tig0019775:14898-14917 | Msa1375940:intron | 40.0% | |
| TGCTGAGAAGTGAAGAATTG+CGG | + | tig0019775:14938-14957 | None:intergenic | 40.0% | |
| ACTTCTCAGCATATAGTGTG+CGG | - | tig0019775:14947-14966 | Msa1375940:intron | 40.0% | |
| TACCATTGAAGCTGTGACTT+AGG | + | tig0019775:15098-15117 | None:intergenic | 40.0% | |
| AAGTCACAGCTTCAATGGTA+TGG | - | tig0019775:15098-15117 | Msa1375940:intron | 40.0% | |
| ACTACACGACCACAGAAATT+TGG | - | tig0019775:15227-15246 | Msa1375940:intron | 40.0% | |
| GGAGCAAATCCAAATTTCTG+TGG | + | tig0019775:15239-15258 | None:intergenic | 40.0% | |
| TCACCAAGAATGGGATTGTA+GGG | + | tig0019775:15260-15279 | None:intergenic | 40.0% | |
| TTCACCAAGAATGGGATTGT+AGG | + | tig0019775:15261-15280 | None:intergenic | 40.0% | |
| ! | GAAACCCACCATGTTTCTAA+AGG | - | tig0019775:15278-15297 | Msa1375940:intron | 40.0% |
| ! | GTTCCCTTTAGAAACATGGT+GGG | + | tig0019775:15285-15304 | None:intergenic | 40.0% |
| AAAAAACTTGTGGTCCCACT+TGG | + | tig0019775:15358-15377 | None:intergenic | 40.0% | |
| CCCTCGAATTAATCGGTTAT+TGG | + | tig0019775:15442-15461 | None:intergenic | 40.0% | |
| GTCAGGGTAATAGTCACATA+TGG | - | tig0019775:15981-16000 | Msa1375940:intron | 40.0% | |
| GGAATATCGGTATCTGATAC+GGG | + | tig0019775:16140-16159 | None:intergenic | 40.0% | |
| ACCGATATTCCACAGATAGT+CGG | - | tig0019775:16149-16168 | Msa1375940:intron | 40.0% | |
| TCCGACTATCTGTGGAATAT+CGG | + | tig0019775:16153-16172 | None:intergenic | 40.0% | |
| CGTATCCTAGAAAAAGACGA+AGG | - | tig0019775:16281-16300 | Msa1375940:intron | 40.0% | |
| TCATGTCCACTCAATAGTGT+TGG | - | tig0019775:16744-16763 | Msa1375940:intron | 40.0% | |
| TTTGTGCCAACACTATTGAG+TGG | + | tig0019775:16753-16772 | None:intergenic | 40.0% | |
| TCTCCACTTCCAAAGTTTGT+TGG | - | tig0019775:16894-16913 | Msa1375940:intron | 40.0% | |
| ATGTCTCTCCATGATTATGG+AGG | + | tig0019775:17107-17126 | None:intergenic | 40.0% | |
| ACCCAATCAATACCAGGAAT+TGG | + | tig0019775:17168-17187 | None:intergenic | 40.0% | |
| !! | ATTCCTGGTATTGATTGGGT+TGG | - | tig0019775:17168-17187 | Msa1375940:intron | 40.0% |
| TCTTTCTTTGGATTTGGGTC+GGG | - | tig0019775:17252-17271 | Msa1375940:intron | 40.0% | |
| GGAAATCGAAGACGGATAAA+AGG | - | tig0019775:17273-17292 | Msa1375940:intron | 40.0% | |
| TGATAGGACAGTGACACATA+TGG | + | tig0019775:17522-17541 | None:intergenic | 40.0% | |
| TGTCACTGTCCTATCAATGT+CGG | - | tig0019775:17526-17545 | Msa1375940:CDS | 40.0% | |
| ATCTGGTATCCGACATTGAT+AGG | + | tig0019775:17538-17557 | None:intergenic | 40.0% | |
| ! | GCTCCATACTCCTTTTGTTA+AGG | - | tig0019775:17749-17768 | Msa1375940:intron | 40.0% |
| CAAACAAGAGCAGATTCTGT+TGG | + | tig0019775:17977-17996 | None:intergenic | 40.0% | |
| CAACAGAATCTGCTCTTGTT+TGG | - | tig0019775:17975-17994 | Msa1375940:CDS | 40.0% | |
| ! | ACAGAATCTGCTCTTGTTTG+GGG | - | tig0019775:17977-17996 | Msa1375940:CDS | 40.0% |
| AATCGTTGCTTATGATGGCT+TGG | + | tig0019775:18012-18031 | None:intergenic | 40.0% | |
| AAGCCATCATAAGCAACGAT+TGG | - | tig0019775:18011-18030 | Msa1375940:CDS | 40.0% | |
| AGCCATCATAAGCAACGATT+GGG | - | tig0019775:18012-18031 | Msa1375940:CDS | 40.0% | |
| GAGAGTCAAAAGGGGAAATT+TGG | - | tig0019775:18095-18114 | Msa1375940:intron | 40.0% | |
| GTGACTCATACCAATGAAGA+TGG | - | tig0019775:18136-18155 | Msa1375940:intron | 40.0% | |
| ATCTGATCTGTCACGCTTCA+AGG | - | tig0019775:14829-14848 | Msa1375940:intron | 45.0% | |
| GCTGAGAAGTGAAGAATTGC+GGG | + | tig0019775:14937-14956 | None:intergenic | 45.0% | |
| TTAGGCATGTTGAAGGTAGG+TGG | + | tig0019775:15080-15099 | None:intergenic | 45.0% | |
| GACTTAGGCATGTTGAAGGT+AGG | + | tig0019775:15083-15102 | None:intergenic | 45.0% | |
| CTGTGACTTAGGCATGTTGA+AGG | + | tig0019775:15087-15106 | None:intergenic | 45.0% | |
| TGCCTAAGTCACAGCTTCAA+TGG | - | tig0019775:15093-15112 | Msa1375940:intron | 45.0% | |
| TGTGTATATTCCACAGCCAC+AGG | - | tig0019775:15125-15144 | Msa1375940:intron | 45.0% | |
| GTTTAGCAAGTCTACTCCTG+TGG | + | tig0019775:15144-15163 | None:intergenic | 45.0% | |
| !! | TGGTGGGTTTCACCAAGAAT+GGG | + | tig0019775:15269-15288 | None:intergenic | 45.0% |
| !! | ATGGTGGGTTTCACCAAGAA+TGG | + | tig0019775:15270-15289 | None:intergenic | 45.0% |
| ! | GGTTCCCTTTAGAAACATGG+TGG | + | tig0019775:15286-15305 | None:intergenic | 45.0% |
| GGAACACGAACAATGGGAAA+AGG | + | tig0019775:15337-15356 | None:intergenic | 45.0% | |
| CCACTTGGAACACGAACAAT+GGG | + | tig0019775:15343-15362 | None:intergenic | 45.0% | |
| CCATTGTTCGTGTTCCAAGT+GGG | - | tig0019775:15341-15360 | Msa1375940:intron | 45.0% | |
| !!! | CCACAAGTTTTTTCGTCACC+CGG | - | tig0019775:15365-15384 | Msa1375940:intron | 45.0% |
| TTTATACGACCATGGCGTCA+GGG | - | tig0019775:15965-15984 | Msa1375940:intron | 45.0% | |
| TGAGGAAATCCACTCAACAG+TGG | - | tig0019775:16065-16084 | Msa1375940:intron | 45.0% | |
| TTGAGTGGACATGAGTACTC+TGG | + | tig0019775:16738-16757 | None:intergenic | 45.0% | |
| ATTCCATGCCACTGATCAGA+TGG | - | tig0019775:16845-16864 | Msa1375940:intron | 45.0% | |
| TTTCCATCTGATCAGTGGCA+TGG | + | tig0019775:16851-16870 | None:intergenic | 45.0% | |
| ! | CAAACTTTGGAAGTGGAGAG+TGG | + | tig0019775:16893-16912 | None:intergenic | 45.0% |
| CAACTGCACCTCCATAATCA+TGG | - | tig0019775:17096-17115 | Msa1375940:intron | 45.0% | |
| TTGCCAACCCAATCAATACC+AGG | + | tig0019775:17174-17193 | None:intergenic | 45.0% | |
| TGTAGCTCAATTCTGCTACC+AGG | + | tig0019775:17224-17243 | None:intergenic | 45.0% | |
| ACATTGACGGTCATTGGGAT+AGG | - | tig0019775:17334-17353 | Msa1375940:intron | 45.0% | |
| GCCATCATAAGCAACGATTG+GGG | - | tig0019775:18013-18032 | Msa1375940:CDS | 45.0% | |
| TCCCCAATCGTTGCTTATGA+TGG | + | tig0019775:18017-18036 | None:intergenic | 45.0% | |
| AAGAGAGGCAAAGAACACTC+TGG | - | tig0019775:18042-18061 | Msa1375940:intron | 45.0% | |
| CTCATACCAATGAAGATGGC+TGG | - | tig0019775:18140-18159 | Msa1375940:intron | 45.0% | |
| ACAGTTCCAGCCATCTTCAT+TGG | + | tig0019775:18149-18168 | None:intergenic | 45.0% | |
| !! | TCTGGGACCCACTTTTGAAT+TGG | + | tig0019775:18175-18194 | None:intergenic | 45.0% |
| TGTCAAGCAACCAGACCAAT+TGG | - | tig0019775:18323-18342 | Msa1375940:five_prime_UTR | 45.0% | |
| ! | AGCTTTTGCACCAATTGGTC+TGG | + | tig0019775:18336-18355 | None:intergenic | 45.0% |
| !!! | AAAATAAATTCATTTTTAAT+TGG | + | tig0019775:15012-15031 | None:intergenic | 5.0% |
| TTGAAGGTAGGTGGTAGCTG+TGG | + | tig0019775:15071-15090 | None:intergenic | 50.0% | |
| GCTCCCTACAATCCCATTCT+TGG | - | tig0019775:15254-15273 | Msa1375940:intron | 50.0% | |
| CCTGTTCGAGCAAGACGTTA+AGG | + | tig0019775:15307-15326 | None:intergenic | 50.0% | |
| CCTTAACGTCTTGCTCGAAC+AGG | - | tig0019775:15304-15323 | Msa1375940:intron | 50.0% | |
| CCCATTGTTCGTGTTCCAAG+TGG | - | tig0019775:15340-15359 | Msa1375940:intron | 50.0% | |
| CCCACTTGGAACACGAACAA+TGG | + | tig0019775:15344-15363 | None:intergenic | 50.0% | |
| CCGGGTGACGAAAAAACTTG+TGG | + | tig0019775:15368-15387 | None:intergenic | 50.0% | |
| GGAGCCCCATAAATTGGTTG+TGG | + | tig0019775:15473-15492 | None:intergenic | 50.0% | |
| GTTTATACGACCATGGCGTC+AGG | - | tig0019775:15964-15983 | Msa1375940:intron | 50.0% | |
| TGACTATTACCCTGACGCCA+TGG | + | tig0019775:15977-15996 | None:intergenic | 50.0% | |
| CTTGTGACACCACTGTTGAG+TGG | + | tig0019775:16077-16096 | None:intergenic | 50.0% | |
| CAAGCCACTGCTATGAAGTC+CGG | - | tig0019775:16093-16112 | Msa1375940:intron | 50.0% | |
| GTATCCGGACTTCATAGCAG+TGG | + | tig0019775:16100-16119 | None:intergenic | 50.0% | |
| GAAGTCCGGATACTCCAAGA+CGG | - | tig0019775:16107-16126 | Msa1375940:intron | 50.0% | |
| CATGGGTATCCGACTATCTG+TGG | + | tig0019775:16161-16180 | None:intergenic | 50.0% | |
| GTGGATGAAGGTAACGAGAG+AGG | - | tig0019775:16414-16433 | Msa1375940:intron | 50.0% | |
| ATACGGGTACGATACGTACG+GGG | + | tig0019775:16698-16717 | None:intergenic | 50.0% | |
| GATACGGGTACGATACGTAC+GGG | + | tig0019775:16699-16718 | None:intergenic | 50.0% | |
| GGATACGGGTACGATACGTA+CGG | + | tig0019775:16700-16719 | None:intergenic | 50.0% | |
| GTACGTATCGTACCCGTATC+CGG | - | tig0019775:16699-16718 | Msa1375940:intron | 50.0% | |
| TACGTATCGTACCCGTATCC+GGG | - | tig0019775:16700-16719 | Msa1375940:intron | 50.0% | |
| TTGCTATGAAGCCCGGATAC+GGG | + | tig0019775:16714-16733 | None:intergenic | 50.0% | |
| ! | CTTGCTATGAAGCCCGGATA+CGG | + | tig0019775:16715-16734 | None:intergenic | 50.0% |
| GGAATGCAGATACCTGAGGA+TGG | + | tig0019775:16830-16849 | None:intergenic | 50.0% | |
| GCATGGAATGCAGATACCTG+AGG | + | tig0019775:16834-16853 | None:intergenic | 50.0% | |
| GGGGTAGAAGTTGACATGCA+TGG | - | tig0019775:17066-17085 | Msa1375940:intron | 50.0% | |
| ! | GGGTTGGCAATGTCACTATC+CGG | - | tig0019775:17184-17203 | Msa1375940:intron | 50.0% |
| ACTATCCGGTGCCTAGAAAC+AGG | - | tig0019775:17198-17217 | Msa1375940:intron | 50.0% | |
| TTGGGTCGGGAAATCGAAGA+CGG | - | tig0019775:17265-17284 | Msa1375940:intron | 50.0% | |
| CGATTGGGGAAAAGCAAGAG+AGG | - | tig0019775:18027-18046 | Msa1375940:CDS | 50.0% | |
| AGAGGCAAAGAACACTCTGG+AGG | - | tig0019775:18045-18064 | Msa1375940:intron | 50.0% | |
| ! | ACACTCTGGAGGAAACTCAG+AGG | - | tig0019775:18056-18075 | Msa1375940:intron | 50.0% |
| CAAGTCTACTCCTGTGGCTG+TGG | + | tig0019775:15138-15157 | None:intergenic | 55.0% | |
| ! | CGTCTCCGTCTTGGAGTATC+CGG | + | tig0019775:16115-16134 | None:intergenic | 55.0% |
| ATACGGGTACGTCTCCGTCT+TGG | + | tig0019775:16124-16143 | None:intergenic | 55.0% | |
| GTACGATACGTACGGGGATG+CGG | + | tig0019775:16692-16711 | None:intergenic | 55.0% | |
| !! | CTCTGGCTTGCTATGAAGCC+CGG | + | tig0019775:16721-16740 | None:intergenic | 55.0% |
| GCAGGTTTCACACCATCCTC+AGG | - | tig0019775:16815-16834 | Msa1375940:intron | 55.0% | |
| ! | CTGCTACCAGGCCTGTTTCT+AGG | + | tig0019775:17212-17231 | None:intergenic | 55.0% |
| !! | ATCAAGCACTGACGGCCGTA+TGG | - | tig0019775:17420-17439 | Msa1375940:intron | 55.0% |
| !! | GGGTGGCAATAGGAGCATCT+GGG | + | tig0019775:18192-18211 | None:intergenic | 55.0% |
| !! | AGGGTGGCAATAGGAGCATC+TGG | + | tig0019775:18193-18212 | None:intergenic | 55.0% |
| !! | CCAGGCCTGTTTCTAGGCAC+CGG | + | tig0019775:17206-17225 | None:intergenic | 60.0% |
| CCGGTGCCTAGAAACAGGCC+TGG | - | tig0019775:17203-17222 | Msa1375940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019775 | gene | 14370 | 18376 | 14370 | ID=Msa1375940;Name=Msa1375940 |
| tig0019775 | mRNA | 14370 | 18376 | 14370 | ID=Msa1375940-mRNA-1;Parent=Msa1375940;Name=Msa1375940-mRNA-1;_AED=0.12;_eAED=0.12;_QI=136|1|1|1|0.83|0.85|7|160|384 |
| tig0019775 | exon | 14370 | 14781 | 14370 | ID=Msa1375940-mRNA-1:exon:4794;Parent=Msa1375940-mRNA-1 |
| tig0019775 | exon | 14967 | 15069 | 14967 | ID=Msa1375940-mRNA-1:exon:4793;Parent=Msa1375940-mRNA-1 |
| tig0019775 | exon | 15391 | 15685 | 15391 | ID=Msa1375940-mRNA-1:exon:4792;Parent=Msa1375940-mRNA-1 |
| tig0019775 | exon | 15831 | 15927 | 15831 | ID=Msa1375940-mRNA-1:exon:4791;Parent=Msa1375940-mRNA-1 |
| tig0019775 | exon | 17421 | 17672 | 17421 | ID=Msa1375940-mRNA-1:exon:4790;Parent=Msa1375940-mRNA-1 |
| tig0019775 | exon | 17896 | 18048 | 17896 | ID=Msa1375940-mRNA-1:exon:4789;Parent=Msa1375940-mRNA-1 |
| tig0019775 | exon | 18238 | 18376 | 18238 | ID=Msa1375940-mRNA-1:exon:4788;Parent=Msa1375940-mRNA-1 |
| tig0019775 | five_prime_UTR | 18241 | 18376 | 18241 | ID=Msa1375940-mRNA-1:five_prime_utr;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 18238 | 18240 | 18238 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 17896 | 18048 | 17896 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 17421 | 17672 | 17421 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 15831 | 15927 | 15831 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 15391 | 15685 | 15391 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 14967 | 15069 | 14967 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | CDS | 14530 | 14781 | 14530 | ID=Msa1375940-mRNA-1:cds;Parent=Msa1375940-mRNA-1 |
| tig0019775 | three_prime_UTR | 14370 | 14529 | 14370 | ID=Msa1375940-mRNA-1:three_prime_utr;Parent=Msa1375940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
