AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0601400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601400 MtrunA17_Chr4g0026401 96.573 496 10 1 1 496 1 489 0.0 989
Msa0601400 MtrunA17_Chr2g0321431 65.362 511 148 8 1 496 1 497 0.0 622
Msa0601400 MtrunA17_Chr1g0174701 43.656 465 187 9 36 468 85 506 8.94e-113 343
Msa0601400 MtrunA17_Chr7g0256211 48.634 366 158 5 119 468 101 452 7.37e-112 338
Msa0601400 MtrunA17_Chr7g0258321 53.774 318 124 5 174 468 146 463 1.37e-111 338
Msa0601400 MtrunA17_Chr8g0353501 57.732 291 104 3 194 468 179 466 1.91e-111 338
Msa0601400 MtrunA17_Chr3g0124601 45.892 353 160 5 126 468 30 361 3.48e-104 315
Msa0601400 MtrunA17_Chr5g0422771 50.000 312 139 3 170 468 157 464 1.22e-101 312
Msa0601400 MtrunA17_Chr1g0210151 49.333 300 138 2 183 468 41 340 4.54e-98 299
Msa0601400 MtrunA17_Chr8g0382861 49.117 283 133 3 196 468 75 356 6.09e-85 266
Msa0601400 MtrunA17_Chr3g0115371 45.570 316 158 4 167 470 38 351 1.01e-83 263
Msa0601400 MtrunA17_Chr5g0424861 46.474 312 153 6 167 465 37 347 5.01e-83 261
Msa0601400 MtrunA17_Chr3g0093451 53.374 163 61 3 197 344 47 209 4.08e-57 189
Msa0601400 MtrunA17_Chr5g0424851 43.056 216 120 1 253 465 7 222 5.25e-54 187
Msa0601400 MtrunA17_Chr5g0424851 41.294 201 116 1 258 456 226 426 4.95e-48 171
Msa0601400 MtrunA17_Chr1g0196951 33.537 164 92 4 288 450 82 229 4.30e-18 83.6
Msa0601400 MtrunA17_Chr8g0384821 25.316 237 138 5 257 455 12 247 7.10e-16 77.8
Msa0601400 MtrunA17_Chr7g0242651 22.831 219 149 4 256 458 5 219 5.91e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0601400 AT1G08320.1 55.467 503 195 8 1 496 1 481 0.0 533
Msa0601400 AT1G08320.4 55.467 503 195 8 1 496 1 481 0.0 533
Msa0601400 AT1G08320.3 55.467 503 195 8 1 496 1 481 0.0 533
Msa0601400 AT1G08320.2 69.255 322 95 3 178 496 37 357 4.31e-163 466
Msa0601400 AT1G08320.5 69.255 322 95 3 178 496 37 357 4.31e-163 466
Msa0601400 AT5G06839.1 47.258 383 162 5 127 469 34 416 1.23e-108 329
Msa0601400 AT3G12250.5 55.137 292 119 2 189 468 12 303 2.62e-108 324
Msa0601400 AT5G06950.2 55.932 295 112 4 189 468 39 330 2.83e-108 325
Msa0601400 AT5G06950.4 55.932 295 112 4 189 468 39 330 2.83e-108 325
Msa0601400 AT5G06950.1 55.932 295 112 4 189 468 39 330 2.83e-108 325
Msa0601400 AT5G06950.5 55.932 295 112 4 189 468 39 330 2.83e-108 325
Msa0601400 AT5G06950.3 55.932 295 112 4 189 468 39 330 2.83e-108 325
Msa0601400 AT3G12250.6 53.642 302 128 2 179 468 29 330 3.72e-108 325
Msa0601400 AT3G12250.2 53.642 302 128 2 179 468 29 330 3.72e-108 325
Msa0601400 AT3G12250.7 53.642 302 128 2 179 468 29 330 3.72e-108 325
Msa0601400 AT3G12250.1 53.642 302 128 2 179 468 29 330 3.72e-108 325
Msa0601400 AT5G06839.3 52.308 325 127 3 173 469 135 459 4.05e-108 329
Msa0601400 AT3G12250.3 53.074 309 133 2 172 468 16 324 5.06e-108 324
Msa0601400 AT5G06839.2 47.135 384 162 6 127 469 34 417 2.97e-107 326
Msa0601400 AT3G12250.4 53.770 305 123 3 179 468 54 355 7.38e-107 322
Msa0601400 AT5G06960.2 53.472 288 122 2 193 468 43 330 6.15e-100 304
Msa0601400 AT5G06960.1 53.472 288 122 2 193 468 43 330 6.15e-100 304
Msa0601400 AT5G06960.3 53.472 288 122 2 193 468 23 310 8.44e-100 303
Msa0601400 AT1G22070.1 50.462 325 143 5 158 469 64 383 4.30e-97 298
Msa0601400 AT1G68640.1 53.898 295 116 4 191 468 161 452 4.62e-95 295
Msa0601400 AT5G10030.5 51.237 283 128 2 196 468 80 362 1.47e-93 289
Msa0601400 AT5G10030.3 51.237 283 128 2 196 468 80 362 1.47e-93 289
Msa0601400 AT5G10030.1 51.237 283 128 2 196 468 80 362 1.47e-93 289
Msa0601400 AT5G10030.4 51.237 283 128 2 196 468 80 362 1.47e-93 289
Msa0601400 AT5G10030.2 51.237 283 128 2 196 468 80 362 1.47e-93 289
Msa0601400 AT1G77920.1 49.342 304 146 4 168 468 68 366 4.08e-92 285
Msa0601400 AT5G65210.6 50.530 283 130 2 196 468 14 296 1.49e-91 281
Msa0601400 AT5G65210.5 50.530 283 130 2 196 468 84 366 6.21e-91 282
Msa0601400 AT5G65210.7 50.530 283 130 2 196 468 84 366 6.21e-91 282
Msa0601400 AT5G65210.3 50.530 283 130 2 196 468 84 366 6.21e-91 282
Msa0601400 AT5G65210.1 50.530 283 130 2 196 468 84 366 6.21e-91 282
Msa0601400 AT5G65210.2 50.530 283 130 2 196 468 84 366 6.21e-91 282
Msa0601400 AT5G65210.4 50.530 283 130 2 196 468 84 366 6.21e-91 282
Msa0601400 AT3G14880.2 27.586 203 126 5 267 450 17 217 2.52e-15 75.9
Msa0601400 AT3G14880.1 26.667 210 126 6 267 450 17 224 7.18e-14 72.0
Msa0601400 AT1G58330.1 26.966 178 117 4 294 458 46 223 2.25e-12 67.0

Find 107 sgRNAs with CRISPR-Local

Find 420 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAGATGTTTCATTGTTAT+TGG 0.193670 4_2:+44008253 Msa0601400:CDS
TTCGAGCCCTTAGCTCTCTT+TGG 0.224036 4_2:+44008293 Msa0601400:CDS
AGCCAAAGAATTGGAGAAAT+TGG 0.227335 4_2:+43999852 Msa0601400:CDS
AACCAATTTCTCCAATTCTT+TGG 0.257495 4_2:-43999854 None:intergenic
TTCACCTTATTAAAGGCATT+TGG 0.259017 4_2:+44005743 Msa0601400:CDS
CACTTGAAATGTTTCCTTCA+TGG 0.278419 4_2:+44000574 Msa0601400:CDS
TATTTAATAGGGACTATTCT+TGG 0.280376 4_2:+44002562 Msa0601400:intron
GGAGCTTAGGGCGGGGCTGC+AGG 0.299476 4_2:+44005618 Msa0601400:CDS
CTATTCTTGGGTTGTGGTGG+TGG 0.320708 4_2:+44002575 Msa0601400:CDS
TTGAAGGTCTTGTTCAAGAT+TGG 0.333324 4_2:-44002429 None:intergenic
GAAAAGCCGTCTAAGGAAAA+AGG 0.335701 4_2:+44002138 Msa0601400:CDS
CATCTATTTGTTGCTGCGCT+AGG 0.338242 4_2:-44006006 None:intergenic
TCAAGTCAACATGTCCCTTA+TGG 0.339592 4_2:+43999894 Msa0601400:CDS
GTCCCTTATGGAGTTCTTCA+TGG 0.344846 4_2:+43999906 Msa0601400:CDS
GGCGGGGCTGCAGGCATCGT+TGG 0.347658 4_2:+44005627 Msa0601400:CDS
TTGAAGAATGAATACATTAA+GGG 0.348931 4_2:-43999948 None:intergenic
CTTGAAATGATGAAGTATTC+AGG 0.362662 4_2:-44006039 None:intergenic
TCACCTTATTAAAGGCATTT+GGG 0.365420 4_2:+44005744 Msa0601400:CDS
TCGAGCCCTTAGCTCTCTTT+GGG 0.367721 4_2:+44008294 Msa0601400:CDS
GGAGGAGAAAGTACTGATTC+AGG 0.370655 4_2:+44000959 Msa0601400:CDS
GGTGTTTGTTGAAATCTAAT+TGG 0.377286 4_2:-44000597 None:intergenic
AGCTAGAGTCAAGTAGATTA+AGG 0.378396 4_2:+44002402 Msa0601400:CDS
ATTGTTATTGGAGAGTATTA+TGG 0.381252 4_2:+44008265 Msa0601400:CDS
ATCTATTTGTTGCTGCGCTA+GGG 0.382547 4_2:-44006005 None:intergenic
CCTGTGAGCGTGCTCTTTGA+AGG 0.383069 4_2:-44002445 None:intergenic
GAAGAGGCAATTGTTCTTCA+AGG 0.388401 4_2:+44000138 Msa0601400:CDS
GCGGGGCTGCAGGCATCGTT+GGG 0.388454 4_2:+44005628 Msa0601400:CDS
CTAGCGCAGCAACAAATAGA+TGG 0.389368 4_2:+44006007 Msa0601400:CDS
CTGCTGAGAGACCCTTCATT+TGG 0.391421 4_2:+44005773 Msa0601400:CDS
AACGACACATGGCGGAGCTT+AGG 0.392881 4_2:+44005605 Msa0601400:CDS
AAGCCCAAATGCCTTTAATA+AGG 0.402887 4_2:-44005747 None:intergenic
ATTTAATAGGGACTATTCTT+GGG 0.408206 4_2:+44002563 Msa0601400:intron
TGTTGTTGTCTTAGGAATCA+AGG 0.409085 4_2:+44000090 Msa0601400:intron
TAGGGACTATTCTTGGGTTG+TGG 0.414870 4_2:+44002569 Msa0601400:intron
GAAATTGGTTTGTCTGAGTC+TGG 0.415790 4_2:+43999867 Msa0601400:CDS
CTGCAAAGAAAAGCCGTCTA+AGG 0.419091 4_2:+44002131 Msa0601400:CDS
TGATCAGACACTGAGACGTT+TGG 0.430811 4_2:+44002093 Msa0601400:intron
ACGACACATGGCGGAGCTTA+GGG 0.435245 4_2:+44005606 Msa0601400:CDS
TGCATGGCTAGCCAAAGAAT+TGG 0.437865 4_2:+43999843 None:intergenic
GCAGCAGCTTCAACAGCAAC+AGG 0.443356 4_2:+44001066 Msa0601400:CDS
ATATAGGGAGGTTCAAAATC+AGG 0.447096 4_2:+44000938 Msa0601400:intron
GCCGGAGGGCCTGTCGTTGA+CGG 0.453170 4_2:+44006121 Msa0601400:CDS
GCAACAAATAGATGGGATAA+TGG 0.454978 4_2:+44006015 Msa0601400:CDS
ATTCCATGAAGAACTCCATA+AGG 0.455812 4_2:-43999909 None:intergenic
GTAGATGTTGACACAACAAT+TGG 0.464222 4_2:+44005979 Msa0601400:intron
TTTGCAATTCTGTGGTTGCT+TGG 0.468162 4_2:-44009099 None:intergenic
AGATGGTTGCCGCCATGGCC+AGG 0.469755 4_2:+44006152 Msa0601400:CDS
TAAGGGACATGTTGACTTGA+AGG 0.470369 4_2:-43999891 None:intergenic
GCAGAAGAAGCTCTCTCTAA+AGG 0.470527 4_2:+44006061 Msa0601400:CDS
AACGACAGGCCCTCCGGCGA+TGG 0.470647 4_2:-44006116 None:intergenic
AGCCAAATCACCTCATGAAA+AGG 0.477424 4_2:+44001144 Msa0601400:CDS
ACTGATGATCGCTTAAGAAC+AGG 0.478092 4_2:+44001097 Msa0601400:CDS
AATTGTAGGCTGATAATTTG+AGG 0.478296 4_2:+44008182 Msa0601400:intron
TGAAATCTAATTGGCCATGA+AGG 0.480352 4_2:-44000588 None:intergenic
GGACTATTCTTGGGTTGTGG+TGG 0.490197 4_2:+44002572 Msa0601400:CDS
GCCGTCAACGACAGGCCCTC+CGG 0.490375 4_2:-44006122 None:intergenic
AACATTTCAAGTGTAGCTGC+TGG 0.491575 4_2:-44000564 None:intergenic
GCAACAGATGGTTGCCGCCA+TGG 0.491703 4_2:+44006147 Msa0601400:CDS
CAAATGAAGGGTCTCTCAGC+AGG 0.492161 4_2:-44005772 None:intergenic
TAACAGCCACCTCCTTCAAT+CGG 0.494670 4_2:-44005708 None:intergenic
TGTTGCATGCCGTCAACGAC+AGG 0.495188 4_2:-44006130 None:intergenic
GTTGTTGTCTTAGGAATCAA+GGG 0.496590 4_2:+44000091 Msa0601400:intron
GAAACCACCTATCCAAATGA+AGG 0.507472 4_2:-44005785 None:intergenic
GTGAGAGAAGCTACAACTCT+TGG 0.508120 4_2:-44000618 None:intergenic
CACATGGCGGAGCTTAGGGC+GGG 0.511735 4_2:+44005610 Msa0601400:CDS
AGACCCTTCATTTGGATAGG+TGG 0.525909 4_2:+44005781 Msa0601400:CDS
CCAACTATGTCGAATATTGA+CGG 0.527349 4_2:+44008219 Msa0601400:CDS
ACATGGCGGAGCTTAGGGCG+GGG 0.538791 4_2:+44005611 Msa0601400:CDS
AATATTGACGGTTCGTCAAG+CGG 0.542904 4_2:+44008231 Msa0601400:CDS
ATTAAGATAAGAAATGATGA+AGG 0.543974 4_2:+44000162 Msa0601400:CDS
ACATAAGGAATGGTCAAAGA+TGG 0.545520 4_2:-44000645 None:intergenic
AGCAACCACAGAATTGCAAA+TGG 0.553522 4_2:+44009102 Msa0601400:CDS
TTGAAGCCCAAAGAGAGCTA+AGG 0.553832 4_2:-44008300 None:intergenic
AGAAAAGACACTTGATCCAA+AGG 0.554531 4_2:+44001876 Msa0601400:CDS
GAGAGACCCTTCATTTGGAT+AGG 0.567532 4_2:+44005778 Msa0601400:CDS
GAGAATGTTTACATAAGGAA+TGG 0.568455 4_2:-44000655 None:intergenic
CCTTCAAAGAGCACGCTCAC+AGG 0.569093 4_2:+44002445 Msa0601400:CDS
TCTATTTGTTGCTGCGCTAG+GGG 0.569490 4_2:-44006004 None:intergenic
ATTGTTGACACCATCGCCGG+AGG 0.572201 4_2:+44006106 Msa0601400:CDS
CCGTCAATATTCGACATAGT+TGG 0.573495 4_2:-44008219 None:intergenic
TGAAGCCCAAAGAGAGCTAA+GGG 0.583591 4_2:-44008299 None:intergenic
TAGCGCAGCAACAAATAGAT+GGG 0.590596 4_2:+44006008 Msa0601400:CDS
TTGTTGACACCATCGCCGGA+GGG 0.591648 4_2:+44006107 Msa0601400:CDS
GGTATTAGGTCTTACTCTCG+TGG 0.591995 4_2:-44008325 None:intergenic
CTTGAGAAATGACTATGAGA+AGG 0.592625 4_2:-44009130 None:intergenic
ACACATGGCGGAGCTTAGGG+CGG 0.596440 4_2:+44005609 Msa0601400:CDS
GCTATTGTTGACACCATCGC+CGG 0.599785 4_2:+44006103 Msa0601400:CDS
ATACATTAAGGGTGATGTTG+AGG 0.600765 4_2:-43999937 None:intergenic
TTCCATGAAGAACTCCATAA+GGG 0.601892 4_2:-43999908 None:intergenic
AAGATTGGAAATCCTGGCCA+TGG 0.602327 4_2:-44006164 None:intergenic
GAATTGAGAGTGATCGTGGA+CGG 0.616655 4_2:+44005658 Msa0601400:CDS
TAATGAATTGAGAGTGATCG+TGG 0.617953 4_2:+44005654 Msa0601400:CDS
AAAGAGAGCTAAGGGCTCGA+AGG 0.622342 4_2:-44008291 None:intergenic
CGTTGACGGCATGCAACAGA+TGG 0.625586 4_2:+44006135 Msa0601400:CDS
TTGAACCATTTGCAATTCTG+TGG 0.626591 4_2:-44009107 None:intergenic
AGAAGAAGATCAACGACACA+TGG 0.630083 4_2:+44005594 Msa0601400:CDS
ACATACCGTGATGAGTTCTG+AGG 0.636962 4_2:-44005812 None:intergenic
AAACCACCTATCCAAATGAA+GGG 0.649407 4_2:-44005784 None:intergenic
CATACCGTGATGAGTTCTGA+GGG 0.662424 4_2:-44005811 None:intergenic
TGGTGTCAACAATAGCATTG+TGG 0.671299 4_2:-44006096 None:intergenic
AGGAGCTGCAATGTTTGACA+TGG 0.673799 4_2:+44005555 Msa0601400:intron
TAGGGAGGTTCAAAATCAGG+AGG 0.677105 4_2:+44000941 Msa0601400:intron
GGTGGTGGCAATATAAGCCC+TGG 0.687235 4_2:+44002590 Msa0601400:CDS
TTGACATGGAGTATGCAAGA+TGG 0.703314 4_2:+44005569 Msa0601400:CDS
CAGACCCTCAGAACTCATCA+CGG 0.712668 4_2:+44005807 Msa0601400:CDS
AGAAGATCAACGACACATGG+CGG 0.715959 4_2:+44005597 Msa0601400:CDS
ATTGGAAATCCTGGCCATGG+CGG 0.718776 4_2:-44006161 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATATATTATATTTTTTTA+GGG - chr4_2:44002004-44002023 None:intergenic 0.0%
!!! AATATATATTATATTTTTTT+AGG - chr4_2:44002005-44002024 None:intergenic 0.0%
!!! ATTAATTATTATTTTTTTTT+GGG + chr4_2:44005957-44005976 Msa0601400:intron 0.0%
!!! ATAATTTTTTATATTTTTTA+GGG - chr4_2:44007060-44007079 None:intergenic 0.0%
!!! TATAATTTTTTATATTTTTT+AGG - chr4_2:44007061-44007080 None:intergenic 0.0%
!! TATATATATATTTATATTTA+GGG - chr4_2:44007318-44007337 None:intergenic 0.0%
!! ATATATATATATTTATATTT+AGG - chr4_2:44007319-44007338 None:intergenic 0.0%
!! ATAAATAAATAAATAAACCA+TGG - chr4_2:44000231-44000250 None:intergenic 10.0%
!! AATTATATATCAATATCAAA+AGG - chr4_2:44000447-44000466 None:intergenic 10.0%
!! AATAACAAAATAAATAATAG+AGG - chr4_2:44000486-44000505 None:intergenic 10.0%
!!! AAAAATAATGAAGTTATTTT+TGG + chr4_2:44000902-44000921 Msa0601400:intron 10.0%
!! AAGAACTAAATAAATTATAT+GGG - chr4_2:44001720-44001739 None:intergenic 10.0%
!! TAAGAACTAAATAAATTATA+TGG - chr4_2:44001721-44001740 None:intergenic 10.0%
!! AAATTAATTAATATTATGGA+TGG + chr4_2:44002321-44002340 Msa0601400:intron 10.0%
!!! AATTTAGACTTTAAAATTTA+CGG + chr4_2:44002808-44002827 Msa0601400:intron 10.0%
!!! ATTTTAATATTATAGATCAA+TGG - chr4_2:44004066-44004085 None:intergenic 10.0%
!!! TACATTTTCATTATAAAATA+TGG + chr4_2:44004371-44004390 Msa0601400:intron 10.0%
!!! TTATTTGTTTTCTTTTTAAT+CGG - chr4_2:44004583-44004602 None:intergenic 10.0%
!! ATAATTAAATGATATTTGAT+TGG - chr4_2:44004737-44004756 None:intergenic 10.0%
!! CAAAAAAAATAATTCAAAAT+TGG - chr4_2:44005008-44005027 None:intergenic 10.0%
!!! TTTGAATTATTTTTTTTGAA+TGG + chr4_2:44005010-44005029 Msa0601400:intron 10.0%
!!! TAGTTATTGAAAATTTTATA+GGG - chr4_2:44006901-44006920 None:intergenic 10.0%
!!! AAAAAATTCTAATTTTTTTC+AGG - chr4_2:44007006-44007025 None:intergenic 10.0%
!!! TATAATATTTTGAATTTTTC+TGG + chr4_2:44007131-44007150 Msa0601400:intron 10.0%
!!! TAAAGATTGAAAATTTTATA+GGG + chr4_2:44007215-44007234 Msa0601400:intron 10.0%
!!! TAATTAATATTGTCAATTTT+TGG + chr4_2:44007644-44007663 Msa0601400:intron 10.0%
!!! TCATTTAATAGTTTTTTTTA+GGG - chr4_2:44008375-44008394 None:intergenic 10.0%
!!! ATCATTTAATAGTTTTTTTT+AGG - chr4_2:44008376-44008395 None:intergenic 10.0%
!! TGATAAAATAAAAATTATAG+AGG - chr4_2:44008484-44008503 None:intergenic 10.0%
!!! TTAATTTTGATATACAATTA+GGG - chr4_2:44008607-44008626 None:intergenic 10.0%
!!! TTTAATTTTGATATACAATT+AGG - chr4_2:44008608-44008627 None:intergenic 10.0%
!!! GATAGTAAATTTAATTTACT+TGG - chr4_2:44001510-44001529 None:intergenic 15.0%
!! ATTATTATATGAATGTTAAG+TGG - chr4_2:44001596-44001615 None:intergenic 15.0%
!! ATTAATCTAGCATTATTTAT+TGG + chr4_2:44001616-44001635 Msa0601400:intron 15.0%
!! AGAACTAAATAAATTATATG+GGG - chr4_2:44001719-44001738 None:intergenic 15.0%
!!! GATATTTAAAATAAAACCTT+TGG - chr4_2:44001895-44001914 None:intergenic 15.0%
!!! TTTTTTTACCATTAATTAAG+AGG + chr4_2:44002038-44002057 Msa0601400:intron 15.0%
!! TCAACAAAAAAAAATTGTAA+TGG - chr4_2:44002231-44002250 None:intergenic 15.0%
!!! ACTTTATTTATTAATGAAAC+AGG + chr4_2:44002367-44002386 Msa0601400:intron 15.0%
!!! TTTATGGTGTTTTATTTAAT+AGG + chr4_2:44002550-44002569 Msa0601400:intron 15.0%
!!! TTATGGTGTTTTATTTAATA+GGG + chr4_2:44002551-44002570 Msa0601400:intron 15.0%
!!! TTTATTATTTATAGCTTTGA+TGG + chr4_2:44003304-44003323 Msa0601400:intron 15.0%
!! TGTTAATATAATGGTTTAAA+GGG - chr4_2:44004305-44004324 None:intergenic 15.0%
!! TTGTTAATATAATGGTTTAA+AGG - chr4_2:44004306-44004325 None:intergenic 15.0%
!!! ATATGAACATTTTCATTTTA+TGG - chr4_2:44004400-44004419 None:intergenic 15.0%
!! AAAAAAAAAAAAAGAACCTA+CGG + chr4_2:44004449-44004468 Msa0601400:intron 15.0%
!! TCAAGAATTTAAAAATTCAA+TGG - chr4_2:44004863-44004882 None:intergenic 15.0%
!!! TTTTTAAATTCTTGAATCAA+TGG + chr4_2:44004868-44004887 Msa0601400:intron 15.0%
!!! TTTTAGAGGAAAATTAAAAA+TGG - chr4_2:44005425-44005444 None:intergenic 15.0%
!!! TAAAAATTGACTTTTTTTAG+AGG - chr4_2:44005439-44005458 None:intergenic 15.0%
!!! GTTTTTAATTAATTAATGTG+TGG - chr4_2:44006631-44006650 None:intergenic 15.0%
!! TTAACACTTATATTTATATG+AGG - chr4_2:44006805-44006824 None:intergenic 15.0%
!!! ATAAGTGTTAAATATGTTTT+TGG + chr4_2:44006814-44006833 Msa0601400:intron 15.0%
!!! GTAGTTATTGAAAATTTTAT+AGG - chr4_2:44006902-44006921 None:intergenic 15.0%
!!! AAATTTTCAATAACTACTTT+TGG + chr4_2:44006905-44006924 Msa0601400:intron 15.0%
!!! AAATTTTCAATCTTTACTTT+TGG - chr4_2:44007211-44007230 None:intergenic 15.0%
!!! GTAAAGATTGAAAATTTTAT+AGG + chr4_2:44007214-44007233 Msa0601400:intron 15.0%
!! GAAAAGTTAACATATTTATA+GGG + chr4_2:44007275-44007294 Msa0601400:intron 15.0%
!!! GTTTTTAACTTATAAATTAC+TGG - chr4_2:44007904-44007923 None:intergenic 15.0%
!! AAAAACTATTATATGTGTAT+TGG + chr4_2:44008409-44008428 Msa0601400:intron 15.0%
!! TTGAAGAATGAATACATTAA+GGG - chr4_2:43999951-43999970 None:intergenic 20.0%
!! TTTGAAGAATGAATACATTA+AGG - chr4_2:43999952-43999971 None:intergenic 20.0%
!!! TTTATTTTTGTTGTTGTCTT+AGG + chr4_2:44000082-44000101 Msa0601400:intron 20.0%
!! ATTAAGATAAGAAATGATGA+AGG + chr4_2:44000162-44000181 Msa0601400:CDS 20.0%
!! AATAAATAAACCATGGAAAA+AGG - chr4_2:44000224-44000243 None:intergenic 20.0%
!!! TTTCTTCTATATATGCTTTT+TGG - chr4_2:44000299-44000318 None:intergenic 20.0%
!! TATATATCAATATCAAAAGG+TGG - chr4_2:44000444-44000463 None:intergenic 20.0%
!! AACATGTAAAAAGAAAACAA+AGG + chr4_2:44001401-44001420 Msa0601400:intron 20.0%
!! ACATGTAAAAAGAAAACAAA+GGG + chr4_2:44001402-44001421 Msa0601400:intron 20.0%
!! TATACTTACCTCTTAATTAA+TGG - chr4_2:44002049-44002068 None:intergenic 20.0%
!! AGATGAATAATAGTATTTGT+GGG - chr4_2:44002195-44002214 None:intergenic 20.0%
!! AAGATGAATAATAGTATTTG+TGG - chr4_2:44002196-44002215 None:intergenic 20.0%
!! CTATATTCTTAATGTATGTT+TGG + chr4_2:44002696-44002715 Msa0601400:intron 20.0%
!!! TAATATTTTGAACATGTGTT+TGG - chr4_2:44002764-44002783 None:intergenic 20.0%
!! GTACATATTTAAATACAAGT+TGG - chr4_2:44002856-44002875 None:intergenic 20.0%
!! TATACATAAAAACTTAGAGA+TGG + chr4_2:44003165-44003184 Msa0601400:intron 20.0%
!! TCAAGATTTGTAAGAATTAA+AGG + chr4_2:44003196-44003215 Msa0601400:intron 20.0%
!! CAAGATTTGTAAGAATTAAA+GGG + chr4_2:44003197-44003216 Msa0601400:intron 20.0%
!!! ATTTATTGTTCTGTTGTTTT+GGG - chr4_2:44003770-44003789 None:intergenic 20.0%
!!! TATTTATTGTTCTGTTGTTT+TGG - chr4_2:44003771-44003790 None:intergenic 20.0%
!!! TAAAGTGTTTGTATTTTGAA+TGG - chr4_2:44003913-44003932 None:intergenic 20.0%
!!! GTAATTTGCAAAAAAAAATC+TGG - chr4_2:44004124-44004143 None:intergenic 20.0%
!! TAATTTACAATTCACAAACT+TGG - chr4_2:44004155-44004174 None:intergenic 20.0%
!!! ATTTTCACGGTTTAAATTTA+AGG - chr4_2:44004242-44004261 None:intergenic 20.0%
!! TTTAAAGAAAAGTTCATCAT+AGG - chr4_2:44004431-44004450 None:intergenic 20.0%
!! AATTTAAAAATTCAATGGCT+TGG - chr4_2:44004858-44004877 None:intergenic 20.0%
!! TATACAGAATGAAGTAAATT+TGG + chr4_2:44005220-44005239 Msa0601400:intron 20.0%
!!! TATTAGTGTGTTATTTTTCT+TGG + chr4_2:44005506-44005525 Msa0601400:intron 20.0%
!!! AAATTTTTTGCCAAGATTAA+TGG + chr4_2:44005930-44005949 Msa0601400:intron 20.0%
!! ATTAATCATTCCATTAATCT+TGG - chr4_2:44005943-44005962 None:intergenic 20.0%
!!! ATGAACAAATTTTTCAAGAT+TGG - chr4_2:44006182-44006201 None:intergenic 20.0%
!!! CATTTTTTTAGGTATATGTT+AGG - chr4_2:44006268-44006287 None:intergenic 20.0%
!! CTAACATATACCTAAAAAAA+TGG + chr4_2:44006266-44006285 Msa0601400:intron 20.0%
!!! ACTTTTGAAACCATTTTTTT+AGG - chr4_2:44006279-44006298 None:intergenic 20.0%
!!! TTTTTGACATCACATTTTTA+AGG + chr4_2:44006530-44006549 Msa0601400:intron 20.0%
!!! TTTAAGGATCTCAAATTTTA+AGG + chr4_2:44006546-44006565 Msa0601400:intron 20.0%
!!! ATATGAGTTTACTTTAAAAG+AGG + chr4_2:44007183-44007202 Msa0601400:intron 20.0%
!!! TATGAGTTTACTTTAAAAGA+GGG + chr4_2:44007184-44007203 Msa0601400:intron 20.0%
!!! AAGTTGAAGGAAAATTTTAA+AGG + chr4_2:44007243-44007262 Msa0601400:intron 20.0%
!!! AGTTGAAGGAAAATTTTAAA+GGG + chr4_2:44007244-44007263 Msa0601400:intron 20.0%
!! CGAAAAGTTAACATATTTAT+AGG + chr4_2:44007274-44007293 Msa0601400:intron 20.0%
!!! TTTAGGGTTAAATATGTTTT+TGG - chr4_2:44007302-44007321 None:intergenic 20.0%
!! GAAAAATTACATAAAATACC+TGG - chr4_2:44007741-44007760 None:intergenic 20.0%
!! AAAATGTTTCAATCAAAAGT+TGG + chr4_2:44007767-44007786 Msa0601400:intron 20.0%
!!! CATGTTTCTAAATTAATTGT+AGG + chr4_2:44008168-44008187 Msa0601400:intron 20.0%
!! ATTAGGGTAAACAATTTATA+AGG - chr4_2:44008591-44008610 None:intergenic 20.0%
!!! CACTTTTTTAATGTTTTCAA+TGG - chr4_2:44009021-44009040 None:intergenic 20.0%
!! TATAGAAGAAAAAAGAGTGT+TGG + chr4_2:44000308-44000327 Msa0601400:intron 25.0%
! CATCATTATTCTACTCAAAA+TGG - chr4_2:44000364-44000383 None:intergenic 25.0%
! AGAATGAGAATGTTTACATA+AGG - chr4_2:44000663-44000682 None:intergenic 25.0%
! CAAAATCACATGTTAAAACT+TGG + chr4_2:44000745-44000764 Msa0601400:intron 25.0%
!!! TGGTGTATTTTGAAACATAT+AGG + chr4_2:44000922-44000941 Msa0601400:intron 25.0%
!!! GGTGTATTTTGAAACATATA+GGG + chr4_2:44000923-44000942 Msa0601400:intron 25.0%
!! ATTAACAAAACCTTTTCATG+AGG - chr4_2:44001157-44001176 None:intergenic 25.0%
!!! TTTTAAGGAAACATTTCTTG+AGG - chr4_2:44001565-44001584 None:intergenic 25.0%
! ATCCATATTAATTTCTCTTG+TGG + chr4_2:44001815-44001834 Msa0601400:intron 25.0%
! AACCACAAGAGAAATTAATA+TGG - chr4_2:44001820-44001839 None:intergenic 25.0%
!!! TTGTTTTTATTGCAGAAGAA+AGG + chr4_2:44001838-44001857 Msa0601400:intron 25.0%
! TATTTAATAGGGACTATTCT+TGG + chr4_2:44002562-44002581 Msa0601400:intron 25.0%
! ATTTAATAGGGACTATTCTT+GGG + chr4_2:44002563-44002582 Msa0601400:intron 25.0%
! ATGTATGTTTGGTATTATAG+CGG + chr4_2:44002707-44002726 Msa0601400:intron 25.0%
!! TTTAAAATTTACGGATGCTA+TGG + chr4_2:44002817-44002836 Msa0601400:intron 25.0%
! TATGTACTAACTAAGTTCTT+AGG + chr4_2:44002869-44002888 Msa0601400:intron 25.0%
!! AAGGGTATGCAAAAATAAAA+TGG - chr4_2:44003263-44003282 None:intergenic 25.0%
!!! ATTTTATTTTTGCATACCCT+TGG + chr4_2:44003262-44003281 Msa0601400:intron 25.0%
!!! GATTCAGAATTTTAAAACAC+CGG + chr4_2:44003402-44003421 Msa0601400:intron 25.0%
!!! TGTTTTGACATTTTTAAGGT+TGG - chr4_2:44003807-44003826 None:intergenic 25.0%
!!! AAGCTGTTTTGACATTTTTA+AGG - chr4_2:44003811-44003830 None:intergenic 25.0%
! TATCATATACGAGGAAATTA+AGG - chr4_2:44003975-44003994 None:intergenic 25.0%
!!! ACTGTCATTTATGATTTTCA+CGG - chr4_2:44004255-44004274 None:intergenic 25.0%
!!! GTTGATTTTTTGACATTAGT+TGG + chr4_2:44004497-44004516 Msa0601400:intron 25.0%
! TAAAATGAGCATTTGTGTAT+GGG + chr4_2:44004891-44004910 Msa0601400:intron 25.0%
!! TTTTCTTTAGGTGACTTTTA+AGG - chr4_2:44004941-44004960 None:intergenic 25.0%
!! CATAAATTGGACTTTTCTTT+AGG - chr4_2:44004953-44004972 None:intergenic 25.0%
! AATACATGAACTGCATAAAT+TGG - chr4_2:44004966-44004985 None:intergenic 25.0%
!! ATTTTGTCAAATCATGTGAA+TGG - chr4_2:44005152-44005171 None:intergenic 25.0%
!!! TTCAACAGATTATTGATTCA+TGG + chr4_2:44005268-44005287 Msa0601400:intron 25.0%
!!! AATTTTCTGTTTCTAACACT+TGG - chr4_2:44005390-44005409 None:intergenic 25.0%
! AGTGTTAGAAACAGAAAATT+TGG + chr4_2:44005390-44005409 Msa0601400:intron 25.0%
!! GATGTTTTTCACCTTATTAA+AGG + chr4_2:44005736-44005755 Msa0601400:CDS 25.0%
!! TCTTGAAAAATTTGTTCATG+AGG + chr4_2:44006183-44006202 Msa0601400:CDS 25.0%
! GCTCTTCAATAAAAATAGTT+TGG - chr4_2:44006305-44006324 None:intergenic 25.0%
! TCATGAAAGTTGTCTATTAA+TGG - chr4_2:44006344-44006363 None:intergenic 25.0%
!!! TCATTTTCCTCTATTTCTAT+TGG + chr4_2:44006369-44006388 Msa0601400:intron 25.0%
!! TTTTCAACCAATAGAAATAG+AGG - chr4_2:44006379-44006398 None:intergenic 25.0%
! TTGTAAAACGTAAAAAGACA+AGG - chr4_2:44006772-44006791 None:intergenic 25.0%
! GAAAAGTGGACATATTTATA+GGG - chr4_2:44006841-44006860 None:intergenic 25.0%
!! AGTTGAAGGAAAATTTTAGA+GGG - chr4_2:44006872-44006891 None:intergenic 25.0%
!! AAGTTGAAGGAAAATTTTAG+AGG - chr4_2:44006873-44006892 None:intergenic 25.0%
!! GACTTTAGTTTATTATTGCT+AGG + chr4_2:44007668-44007687 Msa0601400:intron 25.0%
! TCGATGTATATAATAACACT+AGG + chr4_2:44007811-44007830 Msa0601400:intron 25.0%
! TGTGAAATCATTTGTCAATT+TGG - chr4_2:44007870-44007889 None:intergenic 25.0%
!!! ATTGTTATTGGAGAGTATTA+TGG + chr4_2:44008265-44008284 Msa0601400:CDS 25.0%
! ATCATTTAATACTCGATAGT+TGG - chr4_2:44008349-44008368 None:intergenic 25.0%
!!! AATTACTTTTGTACTTGAAC+AGG + chr4_2:44009050-44009069 Msa0601400:intron 25.0%
AACCAATTTCTCCAATTCTT+TGG - chr4_2:43999857-43999876 None:intergenic 30.0%
!! ATATGCTTTTTGGAAAGAGT+TGG - chr4_2:44000289-44000308 None:intergenic 30.0%
! ATGAAACCTAATCCTTCTTT+TGG - chr4_2:44000421-44000440 None:intergenic 30.0%
! GGTGTTTGTTGAAATCTAAT+TGG - chr4_2:44000600-44000619 None:intergenic 30.0%
GAGAATGTTTACATAAGGAA+TGG - chr4_2:44000658-44000677 None:intergenic 30.0%
!!! GTATTTTGAAACATATAGGG+AGG + chr4_2:44000926-44000945 Msa0601400:intron 30.0%
! GAAGATGCTTTTACACTTAT+TGG - chr4_2:44001016-44001035 None:intergenic 30.0%
!! TTCATTTTCTGAGAGTTGTT+GGG - chr4_2:44001310-44001329 None:intergenic 30.0%
TGAATCTCTGACATGAAATA+TGG + chr4_2:44001351-44001370 Msa0601400:intron 30.0%
GATTAAAACACAAGTGAAGT+AGG - chr4_2:44001488-44001507 None:intergenic 30.0%
ATGTACTCATCAATATGACA+TGG - chr4_2:44001532-44001551 None:intergenic 30.0%
TATTGATGAGTACATTTGCA+TGG + chr4_2:44001537-44001556 Msa0601400:intron 30.0%
TGAATAATAGTATTTGTGGG+TGG - chr4_2:44002192-44002211 None:intergenic 30.0%
AAAAAGAGCAAAACTTACCA+GGG - chr4_2:44002610-44002629 None:intergenic 30.0%
TAAAAAGAGCAAAACTTACC+AGG - chr4_2:44002611-44002630 None:intergenic 30.0%
TGTATGTTTGGTATTATAGC+GGG + chr4_2:44002708-44002727 Msa0601400:intron 30.0%
AAAAATGATGACTCGATAAC+AGG - chr4_2:44003084-44003103 None:intergenic 30.0%
!!! TCGAGTCATCATTTTTTAGA+AGG + chr4_2:44003088-44003107 Msa0601400:intron 30.0%
!!! CGAGTCATCATTTTTTAGAA+GGG + chr4_2:44003089-44003108 Msa0601400:intron 30.0%
!! AGTAGCTTAGTCTTAGTTAT+AGG + chr4_2:44003226-44003245 Msa0601400:intron 30.0%
TACTAAGATCTTCTACCAAA+TGG + chr4_2:44003361-44003380 Msa0601400:intron 30.0%
ACATAACCCGATTACAAATA+AGG + chr4_2:44003573-44003592 Msa0601400:intron 30.0%
!! TACAGTGCCTTATTTGTAAT+CGG - chr4_2:44003583-44003602 None:intergenic 30.0%
!! AATAAGGCACTGTATATATG+CGG + chr4_2:44003589-44003608 Msa0601400:intron 30.0%
!!! GTTTTTTGTGTTCTCTTTTG+AGG - chr4_2:44003619-44003638 None:intergenic 30.0%
ATCTGATGAATGGTTATGAA+AGG - chr4_2:44003879-44003898 None:intergenic 30.0%
GTTAGAAACAATCTGATGAA+TGG - chr4_2:44003889-44003908 None:intergenic 30.0%
! AGGAAATTAAGGTGTTATCT+TGG - chr4_2:44003964-44003983 None:intergenic 30.0%
! CCTTTTCTTTATCATATACG+AGG - chr4_2:44003984-44004003 None:intergenic 30.0%
CCTCGTATATGATAAAGAAA+AGG + chr4_2:44003981-44004000 Msa0601400:intron 30.0%
CGTATATGATAAAGAAAAGG+TGG + chr4_2:44003984-44004003 Msa0601400:intron 30.0%
! ATAAAGAAAAGGTGGCTTTT+AGG + chr4_2:44003992-44004011 Msa0601400:intron 30.0%
! TAAAGAAAAGGTGGCTTTTA+GGG + chr4_2:44003993-44004012 Msa0601400:intron 30.0%
! AAATTCAATGGCTTGGATTT+AGG - chr4_2:44004851-44004870 None:intergenic 30.0%
GTAAAATGAGCATTTGTGTA+TGG + chr4_2:44004890-44004909 Msa0601400:intron 30.0%
! CTATTTTCTCACACATTTCT+AGG - chr4_2:44005061-44005080 None:intergenic 30.0%
AAACAAGAGAAACTAGAACA+AGG - chr4_2:44005103-44005122 None:intergenic 30.0%
! AAAATCTGTATTGTTGTTGC+AGG + chr4_2:44005535-44005554 Msa0601400:intron 30.0%
!! TTCACCTTATTAAAGGCATT+TGG + chr4_2:44005743-44005762 Msa0601400:CDS 30.0%
!! TCACCTTATTAAAGGCATTT+GGG + chr4_2:44005744-44005763 Msa0601400:CDS 30.0%
! CTTGAAATGATGAAGTATTC+AGG - chr4_2:44006042-44006061 None:intergenic 30.0%
!!! TTTTTCAAGATTGGAAATCC+TGG - chr4_2:44006173-44006192 None:intergenic 30.0%
GTATATGTTAGGAAGACTTA+GGG - chr4_2:44006257-44006276 None:intergenic 30.0%
GAAAGTTGTCAAAAAGTTGT+TGG + chr4_2:44006455-44006474 Msa0601400:intron 30.0%
TAAGGATCTCAAATTTCTCT+AGG + chr4_2:44006564-44006583 Msa0601400:intron 30.0%
!! AGCAAAGGAAACATTTTGAT+TGG - chr4_2:44006705-44006724 None:intergenic 30.0%
AAAAAGACAAGGTAGAATTG+CGG - chr4_2:44006761-44006780 None:intergenic 30.0%
CGAAAAGTGGACATATTTAT+AGG - chr4_2:44006842-44006861 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG - chr4_2:44007230-44007249 None:intergenic 30.0%
TTATAGGGACTAAAAGTTGA+AGG + chr4_2:44007230-44007249 Msa0601400:intron 30.0%
!! AAGTTGGTATAAGATAGAGA+TGG + chr4_2:44007783-44007802 Msa0601400:intron 30.0%
AAGAACATGATGCTATCAAA+GGG - chr4_2:44007990-44008009 None:intergenic 30.0%
! TAATCTAGGACTAACACATA+TGG - chr4_2:44008015-44008034 None:intergenic 30.0%
ATATGTGTTAGTCCTAGATT+AGG + chr4_2:44008014-44008033 Msa0601400:intron 30.0%
TATGTGTTAGTCCTAGATTA+GGG + chr4_2:44008015-44008034 Msa0601400:intron 30.0%
AATAATCGAACCCTATGAAT+GGG - chr4_2:44008042-44008061 None:intergenic 30.0%
AATTGTAGGCTGATAATTTG+AGG + chr4_2:44008182-44008201 Msa0601400:intron 30.0%
GCAAGATGTTTCATTGTTAT+TGG + chr4_2:44008253-44008272 Msa0601400:CDS 30.0%
! AATACTCGATAGTTGGTATT+AGG - chr4_2:44008342-44008361 None:intergenic 30.0%
TTGTTGAAAGTTGAATCATG+TGG - chr4_2:44008931-44008950 None:intergenic 30.0%
AGCCAAAGAATTGGAGAAAT+TGG + chr4_2:43999852-43999871 Msa0601400:CDS 35.0%
TTCCATGAAGAACTCCATAA+GGG - chr4_2:43999911-43999930 None:intergenic 35.0%
ATTCCATGAAGAACTCCATA+AGG - chr4_2:43999912-43999931 None:intergenic 35.0%
ATACATTAAGGGTGATGTTG+AGG - chr4_2:43999940-43999959 None:intergenic 35.0%
TGTTGTTGTCTTAGGAATCA+AGG + chr4_2:44000090-44000109 Msa0601400:intron 35.0%
GTTGTTGTCTTAGGAATCAA+GGG + chr4_2:44000091-44000110 Msa0601400:intron 35.0%
!!! CAAGGGTCTGCTTTTAATTT+TGG + chr4_2:44000108-44000127 Msa0601400:CDS 35.0%
!! TAATTTTGGAGAGCTAGAAG+AGG + chr4_2:44000122-44000141 Msa0601400:CDS 35.0%
! TGATGAAGGAAAAGCATGTA+TGG + chr4_2:44000176-44000195 Msa0601400:intron 35.0%
! TTCTTCTCTTCCTTTTTCCA+TGG + chr4_2:44000211-44000230 Msa0601400:intron 35.0%
!! AGAAGAAAAAAGAGTGTTGG+AGG + chr4_2:44000311-44000330 Msa0601400:intron 35.0%
!!! GAGGAAGAAAAGTTTTGAGT+AGG + chr4_2:44000330-44000349 Msa0601400:intron 35.0%
ATGACTCCAAAAGAAGGATT+AGG + chr4_2:44000412-44000431 Msa0601400:intron 35.0%
CACTTGAAATGTTTCCTTCA+TGG + chr4_2:44000574-44000593 Msa0601400:CDS 35.0%
TGAAATCTAATTGGCCATGA+AGG - chr4_2:44000591-44000610 None:intergenic 35.0%
ACATAAGGAATGGTCAAAGA+TGG - chr4_2:44000648-44000667 None:intergenic 35.0%
ATATAGGGAGGTTCAAAATC+AGG + chr4_2:44000938-44000957 Msa0601400:intron 35.0%
! AACCTTTTCATGAGGTGATT+TGG - chr4_2:44001149-44001168 None:intergenic 35.0%
!! CTTCATTTTCTGAGAGTTGT+TGG - chr4_2:44001311-44001330 None:intergenic 35.0%
TCTCTGACATGAAATATGGA+AGG + chr4_2:44001355-44001374 Msa0601400:intron 35.0%
! TAAGTGGTCACAGCATTTTA+AGG - chr4_2:44001580-44001599 None:intergenic 35.0%
! ATCAAGTGTCTTTTCTGATG+TGG - chr4_2:44001872-44001891 None:intergenic 35.0%
AGAAAAGACACTTGATCCAA+AGG + chr4_2:44001876-44001895 Msa0601400:CDS 35.0%
AGCTAGAGTCAAGTAGATTA+AGG + chr4_2:44002402-44002421 Msa0601400:CDS 35.0%
!! TTGAAGGTCTTGTTCAAGAT+TGG - chr4_2:44002432-44002451 None:intergenic 35.0%
ATTGAGGTTGAGACATTCAA+CGG - chr4_2:44002899-44002918 None:intergenic 35.0%
ATGTCTCAACCTCAATTTGA+AGG + chr4_2:44002903-44002922 Msa0601400:intron 35.0%
ATGTTCACTCCTTCAAATTG+AGG - chr4_2:44002915-44002934 None:intergenic 35.0%
TAGTTGGGTCAAGTGTTATA+AGG + chr4_2:44003045-44003064 Msa0601400:intron 35.0%
TTTAATGCAGTCACTACCAA+GGG - chr4_2:44003281-44003300 None:intergenic 35.0%
ATTTAATGCAGTCACTACCA+AGG - chr4_2:44003282-44003301 None:intergenic 35.0%
TGAACGAATGTACTTAGTTC+CGG - chr4_2:44003424-44003443 None:intergenic 35.0%
ACATTCGTTCAATCTCATCT+TGG + chr4_2:44003433-44003452 Msa0601400:intron 35.0%
TTATTTAAACGTGACACCTG+AGG + chr4_2:44003548-44003567 Msa0601400:intron 35.0%
!! ACAGTGCCTTATTTGTAATC+GGG - chr4_2:44003582-44003601 None:intergenic 35.0%
! TGGATATTGTTCTGGATGAA+AGG - chr4_2:44003673-44003692 None:intergenic 35.0%
!!! TGACATTTTTAAGGTTGGCT+GGG - chr4_2:44003802-44003821 None:intergenic 35.0%
!!! TTGACATTTTTAAGGTTGGC+TGG - chr4_2:44003803-44003822 None:intergenic 35.0%
TGAATGGTTATGAAAGGTGA+CGG - chr4_2:44003873-44003892 None:intergenic 35.0%
! TTAAGGTGTTATCTTGGTGT+TGG - chr4_2:44003958-44003977 None:intergenic 35.0%
TTGATTTCCTTGATGTTCAC+TGG + chr4_2:44004806-44004825 Msa0601400:intron 35.0%
TAATGAATTGAGAGTGATCG+TGG + chr4_2:44005654-44005673 Msa0601400:CDS 35.0%
AAGCCCAAATGCCTTTAATA+AGG - chr4_2:44005750-44005769 None:intergenic 35.0%
AAACCACCTATCCAAATGAA+GGG - chr4_2:44005787-44005806 None:intergenic 35.0%
GTAGATGTTGACACAACAAT+TGG + chr4_2:44005979-44005998 Msa0601400:intron 35.0%
GCAACAAATAGATGGGATAA+TGG + chr4_2:44006015-44006034 Msa0601400:CDS 35.0%
GGTATATGTTAGGAAGACTT+AGG - chr4_2:44006258-44006277 None:intergenic 35.0%
GTCAAAAAGTTGTTGGCAAA+TGG + chr4_2:44006462-44006481 Msa0601400:intron 35.0%
TTGGATAGAAGAATGAGCAA+AGG - chr4_2:44006720-44006739 None:intergenic 35.0%
AAACTGCTGACAAATGTGTA+AGG - chr4_2:44007407-44007426 None:intergenic 35.0%
GTACATGTCAAACAAGTAGT+AGG - chr4_2:44007560-44007579 None:intergenic 35.0%
TAATCAAAACATTGAGTGCC+AGG + chr4_2:44007720-44007739 Msa0601400:intron 35.0%
AGAACATGATGCTATCAAAG+GGG - chr4_2:44007989-44008008 None:intergenic 35.0%
CAAGAACATGATGCTATCAA+AGG - chr4_2:44007991-44008010 None:intergenic 35.0%
! CTTTGATAGCATCATGTTCT+TGG + chr4_2:44007989-44008008 Msa0601400:intron 35.0%
GAATAATCGAACCCTATGAA+TGG - chr4_2:44008043-44008062 None:intergenic 35.0%
CCAACTATGTCGAATATTGA+CGG + chr4_2:44008219-44008238 Msa0601400:CDS 35.0%
TTGAACCATTTGCAATTCTG+TGG - chr4_2:44009110-44009129 None:intergenic 35.0%
CTTGAGAAATGACTATGAGA+AGG - chr4_2:44009133-44009152 None:intergenic 35.0%
!! GAAATTGGTTTGTCTGAGTC+TGG + chr4_2:43999867-43999886 Msa0601400:CDS 40.0%
!! TAAGGGACATGTTGACTTGA+AGG - chr4_2:43999894-43999913 None:intergenic 40.0%
TCAAGTCAACATGTCCCTTA+TGG + chr4_2:43999894-43999913 Msa0601400:CDS 40.0%
AAGTGTTCGTAGCACTAAGA+TGG - chr4_2:43999982-44000001 None:intergenic 40.0%
GAAGAGGCAATTGTTCTTCA+AGG + chr4_2:44000138-44000157 Msa0601400:CDS 40.0%
!!! CTTCTTTTGGAGTCATGCAA+GGG - chr4_2:44000408-44000427 None:intergenic 40.0%
! AACATTTCAAGTGTAGCTGC+TGG - chr4_2:44000567-44000586 None:intergenic 40.0%
ACTGATGATCGCTTAAGAAC+AGG + chr4_2:44001097-44001116 Msa0601400:CDS 40.0%
AGCCAAATCACCTCATGAAA+AGG + chr4_2:44001144-44001163 Msa0601400:CDS 40.0%
TCCTAAACCAAGACAATGCT+TGG + chr4_2:44001232-44001251 Msa0601400:intron 40.0%
! ACCAAGCATTGTCTTGGTTT+AGG - chr4_2:44001236-44001255 None:intergenic 40.0%
! AAAGAGACCAAGCATTGTCT+TGG - chr4_2:44001242-44001261 None:intergenic 40.0%
GAAAAGCCGTCTAAGGAAAA+AGG + chr4_2:44002138-44002157 Msa0601400:CDS 40.0%
! CACACACCTTTTTCCTTAGA+CGG - chr4_2:44002147-44002166 None:intergenic 40.0%
TGGTACTGCACAAAGTGTAA+TGG - chr4_2:44002172-44002191 None:intergenic 40.0%
TACAGTTTCACTCTCTAACG+AGG + chr4_2:44002644-44002663 Msa0601400:intron 40.0%
ATGACCCATTAGAACGTAGT+TGG + chr4_2:44003029-44003048 Msa0601400:intron 40.0%
TGACCCATTAGAACGTAGTT+GGG + chr4_2:44003030-44003049 Msa0601400:intron 40.0%
TGACCCAACTACGTTCTAAT+GGG - chr4_2:44003036-44003055 None:intergenic 40.0%
TTGACCCAACTACGTTCTAA+TGG - chr4_2:44003037-44003056 None:intergenic 40.0%
AATGATGACTCGATAACAGG+TGG - chr4_2:44003081-44003100 None:intergenic 40.0%
TTAGTTGACGAGACACCATT+TGG - chr4_2:44003379-44003398 None:intergenic 40.0%
TAATCGGGTTATGTTTCCTC+AGG - chr4_2:44003567-44003586 None:intergenic 40.0%
!! CATTGGTGGTGGATATTGTA+TGG - chr4_2:44003641-44003660 None:intergenic 40.0%
CATACAATATCCACCACCAA+TGG + chr4_2:44003639-44003658 Msa0601400:intron 40.0%
AGAACAATATCCACCACCAA+CGG + chr4_2:44003680-44003699 Msa0601400:intron 40.0%
! TATGTGTTTTCCCGGATGAA+AGG - chr4_2:44003714-44003733 None:intergenic 40.0%
!!! TTCTTTTTTCTGCAGCACTC+CGG - chr4_2:44003738-44003757 None:intergenic 40.0%
GAATGGTTATGAAAGGTGAC+GGG - chr4_2:44003872-44003891 None:intergenic 40.0%
! CTAAAAGTGCACTTGTGCAT+GGG - chr4_2:44004043-44004062 None:intergenic 40.0%
CGAGTTGTGATTGCAAAATC+TGG - chr4_2:44004097-44004116 None:intergenic 40.0%
ATGAATACAGAGTTCACCGT+AGG - chr4_2:44004468-44004487 None:intergenic 40.0%
!! CTGTTTCTAACACTTGGTGA+TGG - chr4_2:44005384-44005403 None:intergenic 40.0%
TTGACATGGAGTATGCAAGA+TGG + chr4_2:44005569-44005588 Msa0601400:CDS 40.0%
AGAAGAAGATCAACGACACA+TGG + chr4_2:44005594-44005613 Msa0601400:CDS 40.0%
GAAACCACCTATCCAAATGA+AGG - chr4_2:44005788-44005807 None:intergenic 40.0%
! ATCTATTTGTTGCTGCGCTA+GGG - chr4_2:44006008-44006027 None:intergenic 40.0%
TAGCGCAGCAACAAATAGAT+GGG + chr4_2:44006008-44006027 Msa0601400:CDS 40.0%
! TGGTGTCAACAATAGCATTG+TGG - chr4_2:44006099-44006118 None:intergenic 40.0%
GCTCAATCATGCATGTATGT+TGG - chr4_2:44006739-44006758 None:intergenic 40.0%
AGAGGGACTAAAACGAAAAG+TGG - chr4_2:44006855-44006874 None:intergenic 40.0%
GCTGACAAATGTGTAAGGAT+TGG - chr4_2:44007402-44007421 None:intergenic 40.0%
TGGTATAAGATAGAGATGGC+TGG + chr4_2:44007787-44007806 Msa0601400:intron 40.0%
TATGAATGGGTCCCTAATCT+AGG - chr4_2:44008029-44008048 None:intergenic 40.0%
TAGATTAGGGACCCATTCAT+AGG + chr4_2:44008028-44008047 Msa0601400:intron 40.0%
AGATTAGGGACCCATTCATA+GGG + chr4_2:44008029-44008048 Msa0601400:intron 40.0%
CCGTCAATATTCGACATAGT+TGG - chr4_2:44008222-44008241 None:intergenic 40.0%
AATATTGACGGTTCGTCAAG+CGG + chr4_2:44008231-44008250 Msa0601400:CDS 40.0%
TTTGCAATTCTGTGGTTGCT+TGG - chr4_2:44009102-44009121 None:intergenic 40.0%
AGCAACCACAGAATTGCAAA+TGG + chr4_2:44009102-44009121 Msa0601400:CDS 40.0%
GTCCCTTATGGAGTTCTTCA+TGG + chr4_2:43999906-43999925 Msa0601400:CDS 45.0%
!!! CCTTCTTTTGGAGTCATGCA+AGG - chr4_2:44000409-44000428 None:intergenic 45.0%
CCTTGCATGACTCCAAAAGA+AGG + chr4_2:44000406-44000425 Msa0601400:intron 45.0%
GTGAGAGAAGCTACAACTCT+TGG - chr4_2:44000621-44000640 None:intergenic 45.0%
TAGGGAGGTTCAAAATCAGG+AGG + chr4_2:44000941-44000960 Msa0601400:intron 45.0%
!! GGAGGAGAAAGTACTGATTC+AGG + chr4_2:44000959-44000978 Msa0601400:CDS 45.0%
TGATCAGACACTGAGACGTT+TGG + chr4_2:44002093-44002112 Msa0601400:intron 45.0%
CTGCAAAGAAAAGCCGTCTA+AGG + chr4_2:44002131-44002150 Msa0601400:CDS 45.0%
! TAGGGACTATTCTTGGGTTG+TGG + chr4_2:44002569-44002588 Msa0601400:intron 45.0%
ACCACTACGAGTAGTGTTTG+TGG + chr4_2:44003469-44003488 Msa0601400:intron 45.0%
TCCACAAACACTACTCGTAG+TGG - chr4_2:44003473-44003492 None:intergenic 45.0%
! ATGAAAGGCACAATGGCCAT+TGG - chr4_2:44003658-44003677 None:intergenic 45.0%
! GTTCTGGATGAAAGGCACAA+TGG - chr4_2:44003665-44003684 None:intergenic 45.0%
!! GTTGGTGGTGGATATTGTTC+TGG - chr4_2:44003681-44003700 None:intergenic 45.0%
CATCCGGGAAAACACATAAC+CGG + chr4_2:44003716-44003735 Msa0601400:intron 45.0%
! ACTCCGGTTATGTGTTTTCC+CGG - chr4_2:44003722-44003741 None:intergenic 45.0%
!!! CATTTTTAAGGTTGGCTGGG+TGG - chr4_2:44003799-44003818 None:intergenic 45.0%
!! TTATGAAAGGTGACGGGCAA+GGG - chr4_2:44003866-44003885 None:intergenic 45.0%
! GCTAAAAGTGCACTTGTGCA+TGG - chr4_2:44004044-44004063 None:intergenic 45.0%
CTAGTGACCAGTGAACATCA+AGG - chr4_2:44004816-44004835 None:intergenic 45.0%
AGGAGCTGCAATGTTTGACA+TGG + chr4_2:44005555-44005574 Msa0601400:intron 45.0%
AGAAGATCAACGACACATGG+CGG + chr4_2:44005597-44005616 Msa0601400:CDS 45.0%
GAATTGAGAGTGATCGTGGA+CGG + chr4_2:44005658-44005677 Msa0601400:CDS 45.0%
TAACAGCCACCTCCTTCAAT+CGG - chr4_2:44005711-44005730 None:intergenic 45.0%
GAGAGACCCTTCATTTGGAT+AGG + chr4_2:44005778-44005797 Msa0601400:CDS 45.0%
AGACCCTTCATTTGGATAGG+TGG + chr4_2:44005781-44005800 Msa0601400:CDS 45.0%
! CATACCGTGATGAGTTCTGA+GGG - chr4_2:44005814-44005833 None:intergenic 45.0%
ACATACCGTGATGAGTTCTG+AGG - chr4_2:44005815-44005834 None:intergenic 45.0%
! TCTATTTGTTGCTGCGCTAG+GGG - chr4_2:44006007-44006026 None:intergenic 45.0%
! CATCTATTTGTTGCTGCGCT+AGG - chr4_2:44006009-44006028 None:intergenic 45.0%
CTAGCGCAGCAACAAATAGA+TGG + chr4_2:44006007-44006026 Msa0601400:CDS 45.0%
GCAGAAGAAGCTCTCTCTAA+AGG + chr4_2:44006061-44006080 Msa0601400:CDS 45.0%
AAGATTGGAAATCCTGGCCA+TGG - chr4_2:44006167-44006186 None:intergenic 45.0%
TGAAGCCCAAAGAGAGCTAA+GGG - chr4_2:44008302-44008321 None:intergenic 45.0%
TTGAAGCCCAAAGAGAGCTA+AGG - chr4_2:44008303-44008322 None:intergenic 45.0%
GGTATTAGGTCTTACTCTCG+TGG - chr4_2:44008328-44008347 None:intergenic 45.0%
!! TAGTTAAAATTAATAAAAAA+GGG - chr4_2:44001458-44001477 None:intergenic 5.0%
!! TTAGTTAAAATTAATAAAAA+AGG - chr4_2:44001459-44001478 None:intergenic 5.0%
!! ATATATTATTATTTCATATA+GGG - chr4_2:44001791-44001810 None:intergenic 5.0%
!! TATATATTATTATTTCATAT+AGG - chr4_2:44001792-44001811 None:intergenic 5.0%
!!! TATATATTATATTTTTTTAG+GGG - chr4_2:44002003-44002022 None:intergenic 5.0%
!! AAAATATAATATATATTCTA+AGG + chr4_2:44002008-44002027 Msa0601400:intron 5.0%
!! TATGAAATTAATTAATATTA+TGG + chr4_2:44002317-44002336 Msa0601400:intron 5.0%
!! ATGATTATTATTATAATTTA+TGG + chr4_2:44002534-44002553 Msa0601400:intron 5.0%
!! TAAAAAAATTGTTAATATAA+TGG - chr4_2:44004314-44004333 None:intergenic 5.0%
!!! AAACAAATAATTTTTTTTTA+AGG + chr4_2:44004593-44004612 Msa0601400:intron 5.0%
!!! GATTAATTATTATTTTTTTT+TGG + chr4_2:44005956-44005975 Msa0601400:intron 5.0%
!! CAAAAATTAAATTAAAAATA+GGG - chr4_2:44006932-44006951 None:intergenic 5.0%
!! ACAAAAATTAAATTAAAAAT+AGG - chr4_2:44006933-44006952 None:intergenic 5.0%
!!! AAAAAATTCTAAATTTTTTT+TGG + chr4_2:44007099-44007118 Msa0601400:intron 5.0%
! GGACTATTCTTGGGTTGTGG+TGG + chr4_2:44002572-44002591 Msa0601400:CDS 50.0%
! CTATTCTTGGGTTGTGGTGG+TGG + chr4_2:44002575-44002594 Msa0601400:CDS 50.0%
! AAAGGCACAATGGCCATTGG+TGG - chr4_2:44003655-44003674 None:intergenic 50.0%
! ATGAAAGGCGCAATGTCCGT+TGG - chr4_2:44003699-44003718 None:intergenic 50.0%
!! GTTATGAAAGGTGACGGGCA+AGG - chr4_2:44003867-44003886 None:intergenic 50.0%
!! CTTGGTGTTGGAGTTTGAGC+AGG - chr4_2:44003946-44003965 None:intergenic 50.0%
GATGTTCACTGGTCACTAGC+TGG + chr4_2:44004817-44004836 Msa0601400:intron 50.0%
! CGACGAGCTTTTCCGATTGA+AGG + chr4_2:44005696-44005715 Msa0601400:CDS 50.0%
! CGAGCTTTTCCGATTGAAGG+AGG + chr4_2:44005699-44005718 Msa0601400:CDS 50.0%
! GCTTTTCCGATTGAAGGAGG+TGG + chr4_2:44005702-44005721 Msa0601400:CDS 50.0%
CAAATGAAGGGTCTCTCAGC+AGG - chr4_2:44005775-44005794 None:intergenic 50.0%
CTGCTGAGAGACCCTTCATT+TGG + chr4_2:44005773-44005792 Msa0601400:CDS 50.0%
CAGACCCTCAGAACTCATCA+CGG + chr4_2:44005807-44005826 Msa0601400:CDS 50.0%
GCTATTGTTGACACCATCGC+CGG + chr4_2:44006103-44006122 Msa0601400:CDS 50.0%
ATTGGAAATCCTGGCCATGG+CGG - chr4_2:44006164-44006183 None:intergenic 50.0%
AAAGAGAGCTAAGGGCTCGA+AGG - chr4_2:44008294-44008313 None:intergenic 50.0%
! TTCGAGCCCTTAGCTCTCTT+TGG + chr4_2:44008293-44008312 Msa0601400:CDS 50.0%
! TCGAGCCCTTAGCTCTCTTT+GGG + chr4_2:44008294-44008313 Msa0601400:CDS 50.0%
GCAGCAGCTTCAACAGCAAC+AGG + chr4_2:44001066-44001085 Msa0601400:CDS 55.0%
CCTGTGAGCGTGCTCTTTGA+AGG - chr4_2:44002448-44002467 None:intergenic 55.0%
! CCTTCAAAGAGCACGCTCAC+AGG + chr4_2:44002445-44002464 Msa0601400:CDS 55.0%
! GGTGGTGGCAATATAAGCCC+TGG + chr4_2:44002590-44002609 Msa0601400:CDS 55.0%
! AAAGGCGCAATGTCCGTTGG+TGG - chr4_2:44003696-44003715 None:intergenic 55.0%
CGGACATTGCGCCTTTCATC+CGG + chr4_2:44003700-44003719 Msa0601400:intron 55.0%
GGACATTGCGCCTTTCATCC+GGG + chr4_2:44003701-44003720 Msa0601400:intron 55.0%
GTTCACTGGTCACTAGCTGG+TGG + chr4_2:44004820-44004839 Msa0601400:intron 55.0%
! AACGACACATGGCGGAGCTT+AGG + chr4_2:44005605-44005624 Msa0601400:CDS 55.0%
! ACGACACATGGCGGAGCTTA+GGG + chr4_2:44005606-44005625 Msa0601400:CDS 55.0%
ATTGTTGACACCATCGCCGG+AGG + chr4_2:44006106-44006125 Msa0601400:CDS 55.0%
TTGTTGACACCATCGCCGGA+GGG + chr4_2:44006107-44006126 Msa0601400:CDS 55.0%
TGTTGCATGCCGTCAACGAC+AGG - chr4_2:44006133-44006152 None:intergenic 55.0%
CGTTGACGGCATGCAACAGA+TGG + chr4_2:44006135-44006154 Msa0601400:CDS 55.0%
GGCACAATGGCCATTGGTGG+TGG - chr4_2:44003652-44003671 None:intergenic 60.0%
!! GCAAGGGCGCTGCAGTTTAG+AGG - chr4_2:44003850-44003869 None:intergenic 60.0%
! ACACATGGCGGAGCTTAGGG+CGG + chr4_2:44005609-44005628 Msa0601400:CDS 60.0%
GCAACAGATGGTTGCCGCCA+TGG + chr4_2:44006147-44006166 Msa0601400:CDS 60.0%
! GGCGCAATGTCCGTTGGTGG+TGG - chr4_2:44003693-44003712 None:intergenic 65.0%
! CACATGGCGGAGCTTAGGGC+GGG + chr4_2:44005610-44005629 Msa0601400:CDS 65.0%
! ACATGGCGGAGCTTAGGGCG+GGG + chr4_2:44005611-44005630 Msa0601400:CDS 65.0%
AGATGGTTGCCGCCATGGCC+AGG + chr4_2:44006152-44006171 Msa0601400:CDS 65.0%
! GCGGGGCTGCAGGCATCGTT+GGG + chr4_2:44005628-44005647 Msa0601400:CDS 70.0%
AACGACAGGCCCTCCGGCGA+TGG - chr4_2:44006119-44006138 None:intergenic 70.0%
GCCGGAGGGCCTGTCGTTGA+CGG + chr4_2:44006121-44006140 Msa0601400:CDS 70.0%
GCCGTCAACGACAGGCCCTC+CGG - chr4_2:44006125-44006144 None:intergenic 70.0%
GGAGCTTAGGGCGGGGCTGC+AGG + chr4_2:44005618-44005637 Msa0601400:CDS 75.0%
! GGCGGGGCTGCAGGCATCGT+TGG + chr4_2:44005627-44005646 Msa0601400:CDS 75.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 43999846 44009159 43999846 ID=Msa0601400;Name=Msa0601400
chr4_2 mRNA 43999846 44009159 43999846 ID=Msa0601400-mRNA-1;Parent=Msa0601400;Name=Msa0601400-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|12|0|496
chr4_2 exon 43999846 43999955 43999846 ID=Msa0601400-mRNA-1:exon:9657;Parent=Msa0601400-mRNA-1
chr4_2 exon 44000104 44000192 44000104 ID=Msa0601400-mRNA-1:exon:9658;Parent=Msa0601400-mRNA-1
chr4_2 exon 44000544 44000665 44000544 ID=Msa0601400-mRNA-1:exon:9659;Parent=Msa0601400-mRNA-1
chr4_2 exon 44000944 44001165 44000944 ID=Msa0601400-mRNA-1:exon:9660;Parent=Msa0601400-mRNA-1
chr4_2 exon 44001853 44001897 44001853 ID=Msa0601400-mRNA-1:exon:9661;Parent=Msa0601400-mRNA-1
chr4_2 exon 44002100 44002159 44002100 ID=Msa0601400-mRNA-1:exon:9662;Parent=Msa0601400-mRNA-1
chr4_2 exon 44002389 44002466 44002389 ID=Msa0601400-mRNA-1:exon:9663;Parent=Msa0601400-mRNA-1
chr4_2 exon 44002572 44002611 44002572 ID=Msa0601400-mRNA-1:exon:9664;Parent=Msa0601400-mRNA-1
chr4_2 exon 44005557 44005828 44005557 ID=Msa0601400-mRNA-1:exon:9665;Parent=Msa0601400-mRNA-1
chr4_2 exon 44005983 44006204 44005983 ID=Msa0601400-mRNA-1:exon:9666;Parent=Msa0601400-mRNA-1
chr4_2 exon 44008190 44008332 44008190 ID=Msa0601400-mRNA-1:exon:9667;Parent=Msa0601400-mRNA-1
chr4_2 exon 44009072 44009159 44009072 ID=Msa0601400-mRNA-1:exon:9668;Parent=Msa0601400-mRNA-1
chr4_2 CDS 43999846 43999955 43999846 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44000104 44000192 44000104 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44000544 44000665 44000544 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44000944 44001165 44000944 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44001853 44001897 44001853 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44002100 44002159 44002100 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44002389 44002466 44002389 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44002572 44002611 44002572 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44005557 44005828 44005557 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44005983 44006204 44005983 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44008190 44008332 44008190 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
chr4_2 CDS 44009072 44009159 44009072 ID=Msa0601400-mRNA-1:cds;Parent=Msa0601400-mRNA-1
Gene Sequence

>Msa0601400

ATGGCTAGCCAAAGAATTGGAGAAATTGGTTTGTCTGAGTCTGGACCTTCAAGTCAACATGTCCCTTATGGAGTTCTTCATGGAATCACTACCTCAACATCACCCTTAATGAATCAAGGGTCTGCTTTTAATTTTGGAGAGCTAGAAGAGGCAATTGTTCTTCAAGGAATTAAGATAAGAAATGATGAAGGAAAAGCATCTGCTTTATTTACAAGCAAACCAGCAGCTACACTTGAAATGTTTCCTTCATGGCCAATTAGATTTCAACAAACACCAAGAGTTGTAGCTTCTCTCACTTCTCCATCTTTGACCATTCCTTATGGAGGTTCAAAATCAGGAGGAGAAAGTACTGATTCAGGATCAACAGAGCTACAATTTGAAACAGATTCACCAATAAGTGTAAAAGCATCTTCATCAGATCATCATAATCATGCTTTTGATCAGCAGCAGCTTCAACAGCAACAGGAGACAGCTACTGATGATCGCTTAAGAACAGGCACATCAACACAGAATCAATCAAAAGCCAAATCACCTCATGAAAAGAAGAAAGGAGCTGTTTCCACATCAGAAAAGACACTTGATCCAAAGACACTGAGACGTTTGGCACAAAATAGAGAAGCTGCAAAGAAAAGCCGTCTAAGGAAAAAGGCTTATGTACAGCAGCTAGAGTCAAGTAGATTAAGGCTATCCAATCTTGAACAAGACCTTCAAAGAGCACGCTCACAGGGACTATTCTTGGGTTGTGGTGGTGGCAATATAAGCCCTGGAGCTGCAATGTTTGACATGGAGTATGCAAGATGGCTAGAAGAAGATCAACGACACATGGCGGAGCTTAGGGCGGGGCTGCAGGCATCGTTGGGAGATAATGAATTGAGAGTGATCGTGGACGGATATCTTTATCATTACGACGAGCTTTTCCGATTGAAGGAGGTGGCTGTTAAATCAGATGTTTTTCACCTTATTAAAGGCATTTGGGCTTCTCCTGCTGAGAGACCCTTCATTTGGATAGGTGGTTTCAGACCCTCAGAACTCATCACGATGTTGACACAACAATTGGAGCCCCTAGCGCAGCAACAAATAGATGGGATAATGGACCTGAATACTTCATCATTTCAAGCAGAAGAAGCTCTCTCTAAAGGTCATGAACAGCTCCACAATGCTATTGTTGACACCATCGCCGGAGGGCCTGTCGTTGACGGCATGCAACAGATGGTTGCCGCCATGGCCAGGATTTCCAATCTTGAAAAATTTGTTCATGAGGCTGATAATTTGAGGCAACAAACTCTTCACCAACTATGTCGAATATTGACGGTTCGTCAAGCGGCAAGATGTTTCATTGTTATTGGAGAGTATTATGGACGCCTTCGAGCCCTTAGCTCTCTTTGGGCTTCAAGACCACGAGAGAACATGATCAATGATGATAACTCATGCCAAGCAACCACAGAATTGCAAATGGTTCAACCTTCTCATAGTCATTTCTCAAGTTTCTGA

Protein sequence

>Msa0601400

MASQRIGEIGLSESGPSSQHVPYGVLHGITTSTSPLMNQGSAFNFGELEEAIVLQGIKIRNDEGKASALFTSKPAATLEMFPSWPIRFQQTPRVVASLTSPSLTIPYGGSKSGGESTDSGSTELQFETDSPISVKASSSDHHNHAFDQQQLQQQQETATDDRLRTGTSTQNQSKAKSPHEKKKGAVSTSEKTLDPKTLRRLAQNREAAKKSRLRKKAYVQQLESSRLRLSNLEQDLQRARSQGLFLGCGGGNISPGAAMFDMEYARWLEEDQRHMAELRAGLQASLGDNELRVIVDGYLYHYDELFRLKEVAVKSDVFHLIKGIWASPAERPFIWIGGFRPSELITMLTQQLEPLAQQQIDGIMDLNTSSFQAEEALSKGHEQLHNAIVDTIAGGPVVDGMQQMVAAMARISNLEKFVHEADNLRQQTLHQLCRILTVRQAARCFIVIGEYYGRLRALSSLWASRPRENMINDDNSCQATTELQMVQPSHSHFSSF*