AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1239870


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239870 MtrunA17_Chr8g0351761 96.919 357 11 0 1 357 1 357 0.0 702
Msa1239870 MtrunA17_Chr7g0245841 70.556 360 77 10 1 357 1 334 2.62e-154 437
Msa1239870 MtrunA17_Chr4g0056761 49.575 353 125 6 17 355 17 330 5.91e-78 242
Msa1239870 MtrunA17_Chr1g0188211 43.132 364 148 11 1 348 1 321 2.10e-67 215
Msa1239870 MtrunA17_Chr1g0179461 41.250 320 141 11 66 356 64 365 1.53e-57 191
Msa1239870 MtrunA17_Chr5g0398621 44.231 260 105 5 15 269 4 228 4.44e-57 186
Msa1239870 MtrunA17_Chr5g0397551 43.295 261 127 6 69 324 68 312 7.47e-53 177
Msa1239870 MtrunA17_Chr6g0476061 50.000 224 87 8 61 269 43 256 3.90e-52 175
Msa1239870 MtrunA17_Chr8g0386741 47.761 201 101 3 70 270 96 292 6.49e-50 170
Msa1239870 MtrunA17_Chr8g0349091 52.083 192 86 2 71 262 89 274 1.00e-48 167
Msa1239870 MtrunA17_Chr4g0054661 49.741 193 85 6 71 259 73 257 1.06e-47 164
Msa1239870 MtrunA17_Chr7g0247431 45.327 214 107 3 69 279 87 293 3.14e-43 152
Msa1239870 MtrunA17_Chr4g0027331 53.435 131 58 3 124 252 2 131 3.06e-33 120
Msa1239870 MtrunA17_Chr1g0190011 40.299 201 93 6 71 261 43 226 3.10e-33 125
Msa1239870 MtrunA17_Chr4g0027371 47.518 141 72 2 131 269 8 148 8.18e-33 122
Msa1239870 MtrunA17_Chr4g0027351 56.757 111 44 2 144 253 21 128 1.41e-32 119
Msa1239870 MtrunA17_Chr7g0274821 34.694 294 158 9 70 350 73 345 3.46e-31 121
Msa1239870 MtrunA17_Chr1g0165101 36.653 251 124 9 68 300 82 315 8.53e-28 111
Msa1239870 MtrunA17_Chr4g0027301 45.522 134 68 3 122 253 9 139 3.36e-25 99.4
Msa1239870 MtrunA17_Chr6g0476241 39.806 206 104 8 71 276 120 305 5.72e-25 103
Msa1239870 MtrunA17_Chr5g0417581 40.288 139 64 4 136 258 13 148 1.02e-22 94.4
Msa1239870 MtrunA17_Chr3g0112131 41.803 122 67 1 145 266 109 226 2.74e-20 90.1
Msa1239870 MtrunA17_Chr3g0133051 39.837 123 71 3 144 264 103 224 1.87e-19 87.4
Msa1239870 MtrunA17_Chr5g0427311 38.636 132 75 4 136 264 74 202 2.68e-19 85.9
Msa1239870 MtrunA17_Chr4g0054651 43.443 122 65 1 145 266 106 223 3.72e-18 84.0
Msa1239870 MtrunA17_Chr1g0168121 41.803 122 67 1 145 266 72 189 9.87e-18 82.0
Msa1239870 MtrunA17_Chr5g0443311 34.158 202 84 5 59 259 38 191 1.95e-17 80.9
Msa1239870 MtrunA17_Chr7g0250031 41.860 129 71 1 145 273 87 211 2.13e-17 81.3
Msa1239870 MtrunA17_Chr3g0086021 42.857 112 57 3 154 262 118 225 6.65e-17 80.1
Msa1239870 MtrunA17_Chr5g0398531 40.984 122 68 1 145 266 130 247 2.58e-16 79.0
Msa1239870 MtrunA17_Chr8g0351651 42.623 122 66 1 145 266 116 233 9.87e-16 77.0
Msa1239870 MtrunA17_Chr5g0400531 39.850 133 63 5 72 197 121 243 1.04e-15 75.9
Msa1239870 MtrunA17_Chr1g0190051 39.344 122 70 1 145 266 104 221 8.33e-15 74.3
Msa1239870 MtrunA17_Chr5g0435681 40.496 121 68 1 146 266 120 236 1.97e-14 73.6
Msa1239870 MtrunA17_Chr5g0398591 34.513 113 64 2 194 306 11 113 4.89e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1239870 AT4G12080.1 55.482 301 107 8 11 289 22 317 2.33e-90 275
Msa1239870 AT4G22770.2 55.273 275 105 6 6 271 13 278 4.01e-76 238
Msa1239870 AT4G22770.1 55.273 275 105 6 6 271 13 278 4.01e-76 238
Msa1239870 AT4G00200.2 47.554 368 128 13 1 355 1 316 6.15e-68 216
Msa1239870 AT4G00200.1 47.554 368 128 13 1 355 1 316 6.15e-68 216
Msa1239870 AT4G25320.1 58.049 205 74 5 70 264 85 287 1.22e-67 218
Msa1239870 AT2G33620.1 49.213 254 111 7 63 307 85 329 9.07e-64 207
Msa1239870 AT2G33620.4 49.213 254 111 7 63 307 85 329 9.07e-64 207
Msa1239870 AT2G33620.2 49.213 254 111 7 63 307 85 329 9.07e-64 207
Msa1239870 AT2G33620.3 49.213 254 111 7 63 307 85 329 9.07e-64 207
Msa1239870 AT5G62260.1 55.603 232 83 9 56 272 62 288 1.48e-63 208
Msa1239870 AT5G62260.3 55.603 232 83 9 56 272 62 288 1.48e-63 208
Msa1239870 AT5G62260.2 55.251 219 79 8 56 259 62 276 1.64e-60 196
Msa1239870 AT5G51590.1 52.273 220 73 4 70 259 77 294 3.68e-58 194
Msa1239870 AT2G45850.1 42.456 285 126 7 70 352 97 345 3.76e-52 176
Msa1239870 AT2G45850.2 42.456 285 126 7 70 352 97 345 3.76e-52 176
Msa1239870 AT1G63470.1 51.309 191 90 3 70 259 104 292 1.34e-50 173
Msa1239870 AT3G61310.1 51.415 212 87 6 67 274 97 296 2.14e-48 167
Msa1239870 AT2G45850.3 51.852 189 83 2 70 258 97 277 1.42e-47 162
Msa1239870 AT4G17950.1 42.308 234 85 7 70 268 130 348 7.92e-45 159
Msa1239870 AT1G63480.5 47.368 190 88 4 70 259 92 269 1.03e-42 152
Msa1239870 AT1G63480.7 47.368 190 88 4 70 259 92 269 1.03e-42 152
Msa1239870 AT1G63480.4 47.368 190 88 4 70 259 92 269 1.03e-42 152
Msa1239870 AT1G63480.3 47.368 190 88 4 70 259 92 269 1.03e-42 152
Msa1239870 AT1G63480.6 47.368 190 88 4 70 259 92 269 1.03e-42 152
Msa1239870 AT1G63480.2 47.368 190 88 4 70 259 98 275 1.11e-42 152
Msa1239870 AT1G63480.1 47.368 190 88 4 70 259 98 275 1.11e-42 152
Msa1239870 AT5G46640.1 44.978 229 97 8 61 272 87 303 2.49e-41 149
Msa1239870 AT3G04590.1 41.053 190 101 5 70 258 104 283 8.73e-35 130
Msa1239870 AT3G04590.2 41.053 190 101 5 70 258 104 283 9.96e-34 129
Msa1239870 AT2G36560.1 38.922 167 99 2 131 294 94 260 8.13e-27 111
Msa1239870 AT3G60870.1 40.171 117 64 2 142 258 86 196 1.31e-18 84.7
Msa1239870 AT5G49700.1 37.600 125 74 3 144 264 85 209 4.20e-18 83.6
Msa1239870 AT2G42940.1 41.129 124 69 1 136 259 74 193 1.71e-17 81.6
Msa1239870 AT3G55560.1 40.984 122 69 1 145 266 118 236 6.87e-17 80.9
Msa1239870 AT1G14490.2 32.418 182 93 5 144 316 51 211 9.80e-17 79.0
Msa1239870 AT1G14490.1 32.418 182 93 5 144 316 32 192 9.81e-17 78.2
Msa1239870 AT5G28590.1 38.333 120 49 2 139 258 27 121 6.29e-16 76.3
Msa1239870 AT4G14465.1 41.228 114 63 1 145 258 97 206 1.12e-15 76.6
Msa1239870 AT2G35270.1 40.984 122 68 1 145 266 108 225 1.23e-15 76.6
Msa1239870 AT4G17800.1 40.984 122 68 1 145 266 112 229 2.13e-15 76.3
Msa1239870 AT4G22810.1 41.600 125 66 2 145 266 135 255 6.25e-14 72.4
Msa1239870 AT4G12050.1 40.650 123 68 2 145 266 148 266 1.40e-13 71.2
Msa1239870 AT1G76500.1 33.333 123 69 2 145 258 102 220 2.19e-13 70.5
Msa1239870 AT3G04570.1 36.154 130 71 2 145 266 110 235 8.24e-13 68.9
Msa1239870 AT4G35390.1 41.379 116 62 2 145 258 93 204 1.91e-12 67.8
Msa1239870 AT2G45430.1 39.683 126 68 2 145 266 119 240 3.43e-12 67.0

Find 141 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCGTCATCCAGATTCTTC+TGG 0.185964 8_2:+21976585 Msa1239870:CDS
TATTTACTTACGATTGAATT+TGG 0.188768 8_2:+21979083 Msa1239870:three_prime_UTR
GCTGCAGCTGTGGCTACTTC+AGG 0.227842 8_2:-21974629 None:intergenic
CTTTCTCAGCACTATTAGTT+TGG 0.237596 8_2:-21978607 None:intergenic
TTTCTCAGCACTATTAGTTT+GGG 0.258422 8_2:-21978606 None:intergenic
GTAGAGCATCTTTGATTTAT+CGG 0.274166 8_2:+21978974 Msa1239870:three_prime_UTR
AGAAGTGAAATTTGAGTTAA+GGG 0.292527 8_2:-21978675 None:intergenic
AGGGGTAGACCAAGGAAATA+TGG 0.299572 8_2:+21974740 Msa1239870:CDS
TGATATGCGGATGGAGCTTC+TGG 0.301535 8_2:-21974566 None:intergenic
CCGCCTTTCGAAGGGAAAAC+TGG 0.306082 8_2:+21978708 Msa1239870:CDS
CTGCCCTGCTTCTTGTTCCT+TGG 0.322269 8_2:-21977755 None:intergenic
AAATTCAATCGTAAGTAAAT+AGG 0.329573 8_2:-21979081 None:intergenic
GGACATGTACTGCAAAATTC+TGG 0.336452 8_2:+21978650 Msa1239870:CDS
CTGTGGTTTCACTTGCTTCA+CGG 0.336722 8_2:-21974843 None:intergenic
CGATAATCAACTTAATTATC+AGG 0.338753 8_2:-21978791 None:intergenic
TTTGTAGGATATTACAAATA+AGG 0.345980 8_2:+21976488 Msa1239870:intron
TTTGAGATACTTTCCTTGTC+TGG 0.346259 8_2:+21977708 Msa1239870:CDS
GAGAAGTGAAATTTGAGTTA+AGG 0.349352 8_2:-21978676 None:intergenic
TCCGTCATCCAGATTCTTCT+GGG 0.353528 8_2:+21976586 Msa1239870:CDS
GTAGTAGGCGGTGGAGTTGC+TGG 0.359916 8_2:+21977816 Msa1239870:CDS
TTTCAGATTTAGAAGAAGAT+TGG 0.377395 8_2:+21973408 Msa1239870:intron
CAGATACCAGAGAACAGATT+TGG 0.377430 8_2:-21978902 None:intergenic
TGGTTTATTTCAGGTGGTGG+TGG 0.379225 8_2:+21978472 Msa1239870:intron
TCAGGGTTATGAACCTGGTT+TGG 0.383570 8_2:-21974611 None:intergenic
TGGTTTGGAACTTCATTCCT+TGG 0.406728 8_2:-21974596 None:intergenic
ATTGTTCCAAATCTGTTCTC+TGG 0.408818 8_2:+21978896 Msa1239870:three_prime_UTR
CTACTTCAGGGTTATGAACC+TGG 0.411417 8_2:-21974616 None:intergenic
CTGCAGCTGTGGCTACTTCA+GGG 0.413234 8_2:-21974628 None:intergenic
GTAGCCACAGCTGCAGCCGC+AGG 0.416742 8_2:+21974635 Msa1239870:CDS
CCATCTGGCCCATATTTCCT+TGG 0.419968 8_2:-21974749 None:intergenic
AGGTATCAATCCTGCGGTTA+CGG 0.429267 8_2:+21974535 Msa1239870:CDS
TTCCCCGGTGAGTGTAGGTT+TGG 0.435635 8_2:+21974697 Msa1239870:CDS
ATATGTGTCTTATCGGCTAC+TGG 0.439406 8_2:+21976543 Msa1239870:CDS
TCCTCCTGCGGCTGCAGCTG+TGG 0.444728 8_2:-21974639 None:intergenic
GCGAGCAATATGTGTCTTAT+CGG 0.444838 8_2:+21976536 Msa1239870:CDS
GCACTATTAGTTTGGGGTGG+CGG 0.448053 8_2:-21978599 None:intergenic
GTTTGATAATATATACTTGA+GGG 0.454467 8_2:+21974478 Msa1239870:five_prime_UTR
CTTCGAAAGGCGGTGGGTGG+AGG 0.455584 8_2:-21978698 None:intergenic
GAGGATGCCATGGGTGGCGG+TGG 0.459212 8_2:+21978629 Msa1239870:CDS
AGCATCTTTGATTTATCGGC+TGG 0.466562 8_2:+21978978 Msa1239870:three_prime_UTR
GGTTTATTTCAGGTGGTGGT+GGG 0.467575 8_2:+21978473 Msa1239870:intron
GGCGGAGCTGAAGATGAAAT+AGG 0.469098 8_2:-21974800 None:intergenic
CTCCACCCACCGCCTTTCGA+AGG 0.470896 8_2:+21978699 Msa1239870:CDS
AACTAATAGTGCTGAGAAAG+AGG 0.473307 8_2:+21978610 Msa1239870:CDS
TATCTGTTACTATAGTCTAT+AGG 0.475294 8_2:+21978919 Msa1239870:three_prime_UTR
GATTTATCGGCTGGTTACTT+AGG 0.475425 8_2:+21978987 Msa1239870:three_prime_UTR
GATTTACTGACGCACCTCAT+AGG 0.475961 8_2:-21976619 None:intergenic
ATGGAACCGTTAAGAAGAAA+AGG 0.482189 8_2:+21974720 Msa1239870:CDS
TTCTCAGCACTATTAGTTTG+GGG 0.490838 8_2:-21978605 None:intergenic
GTCTCACTGGCAAGCCCTGA+TGG 0.493252 8_2:+21977789 Msa1239870:CDS
AGCCCTGATGGTCGCGTAGT+AGG 0.496107 8_2:+21977801 Msa1239870:CDS
TATAGCTGCCACTCCTGTGC+AGG 0.498450 8_2:+21977845 Msa1239870:CDS
CTATTAGTTTGGGGTGGCGG+AGG 0.501818 8_2:-21978596 None:intergenic
TCTCAGTTGTAAATGTTGTC+AGG 0.502735 8_2:-21978831 None:intergenic
GCAAGTGAAACCACAGGGGA+TGG 0.503140 8_2:+21974850 Msa1239870:CDS
CATTTCATCACTGTCAATGC+CGG 0.503879 8_2:+21976343 Msa1239870:CDS
CCGGTGAGTGTAGGTTTGGA+TGG 0.506054 8_2:+21974701 Msa1239870:CDS
AAATTTGTGATGGATCATCT+AGG 0.506878 8_2:+21974890 Msa1239870:CDS
AATGGAATATTATGATAAGT+AGG 0.507027 8_2:+21979022 Msa1239870:three_prime_UTR
CGCCTTTCGAAGGGAAAACT+GGG 0.507842 8_2:+21978709 Msa1239870:CDS
CCAAGGAAATATGGGCCAGA+TGG 0.510350 8_2:+21974749 Msa1239870:CDS
AAGTGTGGAATCACAGTGAC+AGG 0.517609 8_2:+21973433 Msa1239870:five_prime_UTR
GGGGTAGACCAAGGAAATAT+GGG 0.519638 8_2:+21974741 Msa1239870:CDS
GGTGTTTCCCCGGTGAGTGT+AGG 0.524269 8_2:+21974692 Msa1239870:CDS
TGATACTGTCGGTGTTTCCC+CGG 0.528819 8_2:+21974682 Msa1239870:CDS
GGCATGTTGACAGACCCATC+TGG 0.529102 8_2:-21974764 None:intergenic
CCATCCAAACCTACACTCAC+CGG 0.530701 8_2:-21974701 None:intergenic
GAAAGGATGTTTACCTGCAC+AGG 0.532950 8_2:-21977858 None:intergenic
CAAGGAAATATGGGCCAGAT+GGG 0.533009 8_2:+21974750 Msa1239870:CDS
AGGTGGAATGAGTGTCTCAC+TGG 0.534737 8_2:+21977776 Msa1239870:CDS
GTTCCTTGGTTAGTATCAGT+AGG 0.535654 8_2:-21977741 None:intergenic
TGGAACCGTTAAGAAGAAAA+GGG 0.536900 8_2:+21974721 Msa1239870:CDS
GGCGCTATCACCGTAACCGC+AGG 0.538939 8_2:-21974545 None:intergenic
GATGAGAAGTCTTTAGAAGA+AGG 0.539192 8_2:-21974821 None:intergenic
CAAGGAACAAGAAGCAGGGC+AGG 0.539556 8_2:+21977756 Msa1239870:CDS
AGAAGAAGATTGGTGAAGTG+TGG 0.539931 8_2:+21973418 Msa1239870:five_prime_UTR
CATCCAAACCTACACTCACC+GGG 0.541795 8_2:-21974700 None:intergenic
CAGTGTTGTTAGTTGCAGCT+AGG 0.543039 8_2:+21978952 Msa1239870:three_prime_UTR
GATGGTCGCGTAGTAGGCGG+TGG 0.544887 8_2:+21977807 Msa1239870:CDS
GCCACAGCTGCAGCCGCAGG+AGG 0.547008 8_2:+21974638 Msa1239870:CDS
AAAGAGGATGCCATGGGTGG+CGG 0.548375 8_2:+21978626 Msa1239870:CDS
TCCACCCACCGCCTTTCGAA+GGG 0.550500 8_2:+21978700 Msa1239870:CDS
CGTAAGTAAATAGGCAAACA+AGG 0.557038 8_2:-21979072 None:intergenic
GGTCAACATGCACTCTATGC+CGG 0.563460 8_2:+21978730 Msa1239870:CDS
CTAACCAAGGAACAAGAAGC+AGG 0.565981 8_2:+21977751 Msa1239870:CDS
TGCACCAGCCACATTTACTC+AGG 0.575550 8_2:+21978553 Msa1239870:CDS
AGGTGCTGCAGATACTGCAA+TGG 0.578343 8_2:-21978576 None:intergenic
TGCTGAGAAAGAGGATGCCA+TGG 0.579066 8_2:+21978619 Msa1239870:CDS
GAAATAGGCAATGGTGACAA+TGG 0.584349 8_2:-21974785 None:intergenic
ACACCGACAGTATCAGCAGC+AGG 0.584936 8_2:-21974674 None:intergenic
TACATGTCCACCGCCACCCA+TGG 0.588243 8_2:-21978636 None:intergenic
CGTGAAGCAAGTGAAACCAC+AGG 0.590436 8_2:+21974844 Msa1239870:CDS
ATGGCCTGAGTAAATGTGGC+TGG 0.592651 8_2:-21978557 None:intergenic
GTGAACATTCAATATATGCA+TGG 0.593809 8_2:+21974502 Msa1239870:exon
TTCAGATCTTGATGGCCGCT+AGG 0.596191 8_2:-21978506 None:intergenic
ATATGCATGGAAGGAAGAGA+AGG 0.600541 8_2:+21974515 Msa1239870:exon
GCTCCTGCTGCTGATACTGT+CGG 0.601485 8_2:+21974671 Msa1239870:CDS
TGCATTCAAACATACCTCGC+CGG 0.603353 8_2:-21976362 None:intergenic
ACATTCAATATATGCATGGA+AGG 0.604410 8_2:+21974506 Msa1239870:exon
CCTGATGGTCGCGTAGTAGG+CGG 0.607126 8_2:+21977804 Msa1239870:CDS
GATGTTTACCTGCACAGGAG+TGG 0.611223 8_2:-21977853 None:intergenic
CTCTTGTATTCCATCCCCTG+TGG 0.611712 8_2:-21974860 None:intergenic
TCAGCACTATTAGTTTGGGG+TGG 0.613413 8_2:-21978602 None:intergenic
GCCATCAAGATCTGAAAACA+AGG 0.613990 8_2:+21978513 Msa1239870:CDS
GGAACAAGAAGCAGGGCAGG+TGG 0.614997 8_2:+21977759 Msa1239870:CDS
CCGTCATCCAGATTCTTCTG+GGG 0.615042 8_2:+21976587 Msa1239870:CDS
CGTCATCCAGATTCTTCTGG+GGG 0.617667 8_2:+21976588 Msa1239870:CDS
TGCAATGGCCTGAGTAAATG+TGG 0.618756 8_2:-21978561 None:intergenic
CACAGGGGATGGAATACAAG+AGG 0.618940 8_2:+21974861 Msa1239870:CDS
GGTTTGATAATATATACTTG+AGG 0.619187 8_2:+21974477 Msa1239870:five_prime_UTR
GAAATGAATGGGCACTCTGA+TGG 0.621101 8_2:+21976304 Msa1239870:CDS
CCCCAGAAGAATCTGGATGA+CGG 0.622155 8_2:-21976587 None:intergenic
CTTAGGTAGATGCAGCACAA+TGG 0.630850 8_2:+21979004 Msa1239870:three_prime_UTR
GCTGGTGCATAATCAGACTT+AGG 0.632613 8_2:-21978539 None:intergenic
GCTGAAGATGAAATAGGCAA+TGG 0.637503 8_2:-21974794 None:intergenic
CGCCTACTACGCGACCATCA+GGG 0.640739 8_2:-21977803 None:intergenic
GAGAAGTCTTTAGAAGAAGG+CGG 0.641757 8_2:-21974818 None:intergenic
AGAAGAAAAGGGGTAGACCA+AGG 0.648040 8_2:+21974732 Msa1239870:CDS
AAGGAATGAAGTTCCAAACC+AGG 0.649098 8_2:+21974598 Msa1239870:CDS
GGTGCGACATGATATGCGGA+TGG 0.659191 8_2:-21974575 None:intergenic
TAACCAAGGAACAAGAAGCA+GGG 0.661712 8_2:+21977752 Msa1239870:CDS
GCATTGACAGTGATGAAATG+CGG 0.670620 8_2:-21976340 None:intergenic
GATAAGACACATATTGCTCG+CGG 0.677068 8_2:-21976534 None:intergenic
GTGAAGCAAGTGAAACCACA+GGG 0.677228 8_2:+21974845 Msa1239870:CDS
CCGCATATCATGTCGCACCA+AGG 0.679104 8_2:+21974579 Msa1239870:CDS
CATCACTGTCAATGCCGGCG+AGG 0.679492 8_2:+21976348 Msa1239870:CDS
GAGAAAGAGGATGCCATGGG+TGG 0.680486 8_2:+21978623 Msa1239870:CDS
ACAGGGGATGGAATACAAGA+GGG 0.685377 8_2:+21974862 Msa1239870:CDS
AAATAGGCAAACAAGGACCA+AGG 0.686050 8_2:-21979065 None:intergenic
GTGGGAAGCTTTCTGCCTAG+CGG 0.688039 8_2:+21978491 Msa1239870:CDS
GGAACCGTTAAGAAGAAAAG+GGG 0.688506 8_2:+21974722 Msa1239870:CDS
TATGCCGGACACAAGAAAAG+CGG 0.691783 8_2:+21978745 Msa1239870:CDS
ATGCCTACTGATACTAACCA+AGG 0.692561 8_2:+21977738 Msa1239870:CDS
CCTTGGTGCGACATGATATG+CGG 0.694472 8_2:-21974579 None:intergenic
AGGCATGAATGATCCAGACA+AGG 0.701025 8_2:-21977721 None:intergenic
TAAGATAACAATAGAGAACA+CGG 0.703524 8_2:-21978872 None:intergenic
AGCAGCAGTAGATCCTCCTG+CGG 0.704949 8_2:-21974651 None:intergenic
AAGAGAAGGTATCAATCCTG+CGG 0.707222 8_2:+21974529 Msa1239870:CDS
GCTGAGAAAGAGGATGCCAT+GGG 0.708603 8_2:+21978620 Msa1239870:CDS
ATCCAAACCTACACTCACCG+GGG 0.724447 8_2:-21974699 None:intergenic
TGAAGCAAGTGAAACCACAG+GGG 0.784596 8_2:+21974846 Msa1239870:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATTCATTATAACTT+TGG - chr8_2:21976449-21976468 None:intergenic 10.0%
!!! TTTTGATTTTAAAGTCTTAA+TGG + chr8_2:21973817-21973836 Msa1239870:intron 15.0%
!! ATGAAAAAAAATAACAACTA+TGG - chr8_2:21974004-21974023 None:intergenic 15.0%
!! TCAAGTTTAATTAATTCTTA+CGG + chr8_2:21975466-21975485 Msa1239870:intron 15.0%
!!! AATTCAGAAATATTTTTTGT+TGG + chr8_2:21976268-21976287 Msa1239870:intron 15.0%
!!! GATTGATAATATTTATAATC+AGG + chr8_2:21976769-21976788 Msa1239870:intron 15.0%
!!! ATTTTGTAAATTAATCAAGA+TGG + chr8_2:21976907-21976926 Msa1239870:intron 15.0%
!!! TTATTTGTTCTGAAATTCAA+AGG - chr8_2:21973255-21973274 None:intergenic 20.0%
!! AAAACAATCAGAAAGAAAAT+GGG - chr8_2:21974433-21974452 None:intergenic 20.0%
!! TAAAACAATCAGAAAGAAAA+TGG - chr8_2:21974434-21974453 None:intergenic 20.0%
!!! GTTTGATAATATATACTTGA+GGG + chr8_2:21974478-21974497 Msa1239870:five_prime_UTR 20.0%
!! AGCATTAAATCAATGTATAA+AGG - chr8_2:21974927-21974946 None:intergenic 20.0%
!! TACACAACTTGTATTTATAA+TGG - chr8_2:21975302-21975321 None:intergenic 20.0%
!! AATTAATTAATTCCGCTATT+GGG + chr8_2:21975423-21975442 Msa1239870:intron 20.0%
!! TAAGTAAATTCTATGTATCA+AGG + chr8_2:21975564-21975583 Msa1239870:intron 20.0%
!! ACTGAAATTAATATAAGCAA+CGG - chr8_2:21975850-21975869 None:intergenic 20.0%
!! TTCTTTACAAATTACAATGA+GGG - chr8_2:21975743-21975762 None:intergenic 20.0%
!! ATTCTTTACAAATTACAATG+AGG - chr8_2:21975744-21975763 None:intergenic 20.0%
!! ATTTGTAAAGAATTACAATG+AGG + chr8_2:21975798-21975817 Msa1239870:intron 20.0%
!! TTTGTAAAGAATTACAATGA+GGG + chr8_2:21975799-21975818 Msa1239870:intron 20.0%
!! ACTGAAATTAATATAAGCAA+AGG + chr8_2:21975850-21975869 Msa1239870:intron 20.0%
!!! CTTTTGTTTATAAACAGTAA+CGG + chr8_2:21975917-21975936 Msa1239870:intron 20.0%
!!! TACACAACTTGTTTTTATAA+TGG - chr8_2:21975975-21975994 None:intergenic 20.0%
!! ACTGAAATTAATATAAGCAA+CGG + chr8_2:21975850-21975869 Msa1239870:intron 20.0%
!! TAAGTAAATTCTATGTATCA+AGG - chr8_2:21975564-21975583 None:intergenic 20.0%
!! TTTGTAGGATATTACAAATA+AGG + chr8_2:21976488-21976507 Msa1239870:intron 20.0%
!!! GTTTTTTGTTTATATGAGAA+TGG + chr8_2:21976820-21976839 Msa1239870:intron 20.0%
!! TCCAAAACATAATCAAATAT+CGG + chr8_2:21977444-21977463 Msa1239870:intron 20.0%
!! ATATTAAACAGAAGATATTG+TGG - chr8_2:21977656-21977675 None:intergenic 20.0%
!!! TATTTTTCTTGGTTTATTTC+AGG + chr8_2:21978463-21978482 Msa1239870:intron 20.0%
!! AATGGAATATTATGATAAGT+AGG + chr8_2:21979022-21979041 Msa1239870:three_prime_UTR 20.0%
!! AAATTCAATCGTAAGTAAAT+AGG - chr8_2:21979084-21979103 None:intergenic 20.0%
!! TATTTACTTACGATTGAATT+TGG + chr8_2:21979083-21979102 Msa1239870:three_prime_UTR 20.0%
!!! AAAAAAAACTGTTGAGTTGA+TGG - chr8_2:21973207-21973226 None:intergenic 25.0%
! TTTCAGATTTAGAAGAAGAT+TGG + chr8_2:21973408-21973427 Msa1239870:intron 25.0%
!!! CTTTATGTCTTTTAAAGTTC+TGG + chr8_2:21973579-21973598 Msa1239870:intron 25.0%
!!! TTCTGTTTTTGAATAGCTTT+TGG + chr8_2:21973634-21973653 Msa1239870:intron 25.0%
!!! ACCAAATATTTTTACTCAAG+TGG + chr8_2:21973750-21973769 Msa1239870:intron 25.0%
!!! CCAAATATTTTTACTCAAGT+GGG + chr8_2:21973751-21973770 Msa1239870:intron 25.0%
! ATAACAACTATGGTTCAAAT+TGG - chr8_2:21973994-21974013 None:intergenic 25.0%
! AAACAATCAGAAAGAAAATG+GGG - chr8_2:21974432-21974451 None:intergenic 25.0%
!!! CTGATTGTTTTATACTTTCT+TGG + chr8_2:21974442-21974461 Msa1239870:intron 25.0%
! TTTATACTTTCTTGGATTGT+AGG + chr8_2:21974450-21974469 Msa1239870:intron 25.0%
!! GGTTTGATAATATATACTTG+AGG + chr8_2:21974477-21974496 Msa1239870:five_prime_UTR 25.0%
! AAACATCAACAAAAGGAAAA+AGG - chr8_2:21975004-21975023 None:intergenic 25.0%
! GTTGTACAATTAAAGGAATA+TGG - chr8_2:21975192-21975211 None:intergenic 25.0%
! CTATGAAGTTGTACAATTAA+AGG - chr8_2:21975199-21975218 None:intergenic 25.0%
! GAATTAATTAATTCCGCTAT+TGG + chr8_2:21975422-21975441 Msa1239870:intron 25.0%
! AAGGCAACTTGTATTTATAA+TGG + chr8_2:21975583-21975602 Msa1239870:intron 25.0%
! ATACCTTAATAAGTGTGAAA+TGG - chr8_2:21975667-21975686 None:intergenic 25.0%
!!! AATTACAATGAGGGTATTAT+GGG - chr8_2:21975734-21975753 None:intergenic 25.0%
!!! AAATTACAATGAGGGTATTA+TGG - chr8_2:21975735-21975754 None:intergenic 25.0%
!!! AAATTACAATGAGGGTATTT+TGG + chr8_2:21976030-21976049 Msa1239870:intron 25.0%
!!! AATTACAATGAGGGTATTTT+GGG + chr8_2:21976031-21976050 Msa1239870:intron 25.0%
! AAGGCAACTTGTATTTATAA+TGG - chr8_2:21975583-21975602 None:intergenic 25.0%
!! CATTATAACTTTGGAAGTAA+TGG - chr8_2:21976440-21976459 None:intergenic 25.0%
!! TATTATCTTGCTATACTCTT+TGG + chr8_2:21976465-21976484 Msa1239870:intron 25.0%
!! TGATATCATTTTCACAACAA+GGG + chr8_2:21976511-21976530 Msa1239870:CDS 25.0%
!! GTTCTGTTTTATGTAAAGTA+TGG + chr8_2:21976715-21976734 Msa1239870:intron 25.0%
! TTATGTAAAGTATGGATCTA+AGG + chr8_2:21976723-21976742 Msa1239870:intron 25.0%
!! TTAGGTATTGCAATAATCAT+CGG + chr8_2:21976747-21976766 Msa1239870:intron 25.0%
! GTTCAGTAAATTAATCAAGA+TGG + chr8_2:21976861-21976880 Msa1239870:intron 25.0%
!! TTTTCAAAATAGGGTCAATT+TGG - chr8_2:21977127-21977146 None:intergenic 25.0%
!! TCAAAGAGGTTTTCAAAATA+GGG - chr8_2:21977136-21977155 None:intergenic 25.0%
!!! TATTTTGAAAACCTCTTTGA+GGG + chr8_2:21977136-21977155 Msa1239870:intron 25.0%
!!! TCCTGTTTTCTTTTGTTTTA+TGG + chr8_2:21977255-21977274 Msa1239870:intron 25.0%
! ACCATAAAACAAAAGAAAAC+AGG - chr8_2:21977259-21977278 None:intergenic 25.0%
!!! TTCCTCTGTTTTTTGTTTTT+TGG + chr8_2:21977307-21977326 Msa1239870:intron 25.0%
!! ACCGATATTTGATTATGTTT+TGG - chr8_2:21977448-21977467 None:intergenic 25.0%
!! GAATGTTGATGTATTGATAT+TGG + chr8_2:21977628-21977647 Msa1239870:intron 25.0%
! TTGTTTGGCAACTATATTAA+GGG - chr8_2:21977961-21977980 None:intergenic 25.0%
! TTTGTTTGGCAACTATATTA+AGG - chr8_2:21977962-21977981 None:intergenic 25.0%
! AATATAGTTGCCAAACAAAT+AGG + chr8_2:21977963-21977982 Msa1239870:intron 25.0%
! AATTCTCAATCCTATTTGTT+TGG - chr8_2:21977976-21977995 None:intergenic 25.0%
! AAACAGTGAAATATTTGGAA+AGG - chr8_2:21978089-21978108 None:intergenic 25.0%
! ATAGGAAACAGTGAAATATT+TGG - chr8_2:21978094-21978113 None:intergenic 25.0%
! CTGTTTACAAAGATTTGTAT+AGG - chr8_2:21978112-21978131 None:intergenic 25.0%
! AATGTCTTCTCATACTAAAT+AGG + chr8_2:21978195-21978214 Msa1239870:intron 25.0%
! TTAAATTCAATCACATGTGT+TGG + chr8_2:21978370-21978389 Msa1239870:intron 25.0%
!! AGGATCACTTATATTTTTCT+TGG + chr8_2:21978452-21978471 Msa1239870:intron 25.0%
!! AGAAGTGAAATTTGAGTTAA+GGG - chr8_2:21978678-21978697 None:intergenic 25.0%
! CGATAATCAACTTAATTATC+AGG - chr8_2:21978794-21978813 None:intergenic 25.0%
! TAAGATAACAATAGAGAACA+CGG - chr8_2:21978875-21978894 None:intergenic 25.0%
! TATCTGTTACTATAGTCTAT+AGG + chr8_2:21978919-21978938 Msa1239870:three_prime_UTR 25.0%
!!! TGAGTTGATGGTTTTTGTAA+AGG - chr8_2:21973195-21973214 None:intergenic 30.0%
AGACATAAAGCTGAAACTAA+CGG - chr8_2:21973569-21973588 None:intergenic 30.0%
!! TTTAAAGTTCTGGAAAATGC+TGG + chr8_2:21973589-21973608 Msa1239870:intron 30.0%
!! TTAAAGTTCTGGAAAATGCT+GGG + chr8_2:21973590-21973609 Msa1239870:intron 30.0%
CCCACTTGAGTAAAAATATT+TGG - chr8_2:21973754-21973773 None:intergenic 30.0%
!!! GTGTATCTTTTTTCATCTTC+TGG + chr8_2:21973851-21973870 Msa1239870:intron 30.0%
!!! TTTTTTCATCTTCTGGTATG+TGG + chr8_2:21973858-21973877 Msa1239870:intron 30.0%
! CTTTTATTACATGCTCAACA+AGG + chr8_2:21974130-21974149 Msa1239870:intron 30.0%
! ATGCCTTCAATTTAAAGTGT+CGG - chr8_2:21974230-21974249 None:intergenic 30.0%
! CTTTAAATTGAAGGCATGTT+TGG + chr8_2:21974233-21974252 Msa1239870:intron 30.0%
AACAATCAGAAAGAAAATGG+GGG - chr8_2:21974431-21974450 None:intergenic 30.0%
GTGAACATTCAATATATGCA+TGG + chr8_2:21974502-21974521 Msa1239870:exon 30.0%
ACATTCAATATATGCATGGA+AGG + chr8_2:21974506-21974525 Msa1239870:exon 30.0%
!! AAATTTGTGATGGATCATCT+AGG + chr8_2:21974890-21974909 Msa1239870:CDS 30.0%
!! CATTGATTTAATGCTCTTGT+TGG + chr8_2:21974932-21974951 Msa1239870:intron 30.0%
ACACTTCAAACATCAACAAA+AGG - chr8_2:21975011-21975030 None:intergenic 30.0%
! AAATTTGAGAGCTTTTGTTG+TGG - chr8_2:21975120-21975139 None:intergenic 30.0%
AACCTAGAAAGTTGTAAACT+CGG - chr8_2:21975240-21975259 None:intergenic 30.0%
! TGCTTTTAAACAGTAACAGA+GGG - chr8_2:21975637-21975656 None:intergenic 30.0%
!! TTGCTTTTAAACAGTAACAG+AGG - chr8_2:21975638-21975657 None:intergenic 30.0%
TCACCATTTCACACTTATTA+AGG + chr8_2:21975661-21975680 Msa1239870:intron 30.0%
TTGTTTATAAACAGTAACGG+AGG + chr8_2:21975920-21975939 Msa1239870:intron 30.0%
! TGTTTATAAACAGTAACGGA+GGG + chr8_2:21975921-21975940 Msa1239870:intron 30.0%
ACATTTCGCAAATTACAATG+AGG + chr8_2:21976021-21976040 Msa1239870:intron 30.0%
CATTTCGCAAATTACAATGA+GGG + chr8_2:21976022-21976041 Msa1239870:intron 30.0%
ATACCTTAACAAGTGTGAAA+TGG + chr8_2:21976098-21976117 Msa1239870:intron 30.0%
!! CTTTTGCTTTTAAACAGTAG+CGG + chr8_2:21976124-21976143 Msa1239870:intron 30.0%
!!! TTTTTTGTTGGTACTTTTGC+AGG + chr8_2:21976280-21976299 Msa1239870:intron 30.0%
AATTTGTATAACGCTTAGGA+AGG - chr8_2:21976410-21976429 None:intergenic 30.0%
CATCAATTTGTATAACGCTT+AGG - chr8_2:21976414-21976433 None:intergenic 30.0%
! GTGATATCATTTTCACAACA+AGG + chr8_2:21976510-21976529 Msa1239870:CDS 30.0%
!! ATGAATTTAGGCTTTAAGCA+TGG - chr8_2:21976672-21976691 None:intergenic 30.0%
CAGAAGCTTCAAATGAATTT+AGG - chr8_2:21976684-21976703 None:intergenic 30.0%
! AAAGTATGGATCTAAGGTTT+AGG + chr8_2:21976729-21976748 Msa1239870:intron 30.0%
TTCTACTAATGTATTGAGTC+AGG + chr8_2:21976954-21976973 Msa1239870:intron 30.0%
ATATGTTCAGTAGTCAATAG+TGG + chr8_2:21977006-21977025 Msa1239870:intron 30.0%
!! AGCTGCTATTTGATTTTAGT+AGG + chr8_2:21977095-21977114 Msa1239870:intron 30.0%
! CTCAAAGAGGTTTTCAAAAT+AGG - chr8_2:21977137-21977156 None:intergenic 30.0%
!! CTATTTTGAAAACCTCTTTG+AGG + chr8_2:21977135-21977154 Msa1239870:intron 30.0%
!!! TTTTTTCTTCCTCTGTTGTA+TGG + chr8_2:21977212-21977231 Msa1239870:intron 30.0%
CACCAAAAAACAAAAAACAG+AGG - chr8_2:21977312-21977331 None:intergenic 30.0%
AACATAATAGTAGTCAATCC+CGG - chr8_2:21977495-21977514 None:intergenic 30.0%
AAATGACTTTCACAAAAGTC+TGG + chr8_2:21977529-21977548 Msa1239870:intron 30.0%
TGTTTGGCAACTATATTAAG+GGG - chr8_2:21977960-21977979 None:intergenic 30.0%
GACATAGAATTGCAAGTTTA+GGG - chr8_2:21978221-21978240 None:intergenic 30.0%
AGACATAGAATTGCAAGTTT+AGG - chr8_2:21978222-21978241 None:intergenic 30.0%
GTATAGGAATCATGTTAACT+TGG - chr8_2:21978282-21978301 None:intergenic 30.0%
! TATAAGTGATCCTTCTTTTG+AGG - chr8_2:21978445-21978464 None:intergenic 30.0%
! TTTTCTTGGTTTATTTCAGG+TGG + chr8_2:21978466-21978485 Msa1239870:intron 30.0%
! TTTCTCAGCACTATTAGTTT+GGG - chr8_2:21978609-21978628 None:intergenic 30.0%
! GAGAAGTGAAATTTGAGTTA+AGG - chr8_2:21978679-21978698 None:intergenic 30.0%
! GTAGAGCATCTTTGATTTAT+CGG + chr8_2:21978974-21978993 Msa1239870:three_prime_UTR 30.0%
!! GTAGGCTAATTTTGATGTAA+TGG + chr8_2:21979040-21979059 Msa1239870:three_prime_UTR 30.0%
!! ATTTTGATGTAATGGTACCT+TGG + chr8_2:21979048-21979067 Msa1239870:three_prime_UTR 30.0%
TGAGTTAACTAGTTGAGTTC+TGG + chr8_2:21973326-21973345 Msa1239870:intron 35.0%
ATCAAAGGATCACACAAATG+AGG - chr8_2:21974096-21974115 None:intergenic 35.0%
CATTTGTGTGATCCTTTGAT+TGG + chr8_2:21974096-21974115 Msa1239870:intron 35.0%
GCAGACTAAAAACCAATCAA+AGG - chr8_2:21974111-21974130 None:intergenic 35.0%
! TCAACAAGGTTTGACTTTGA+AGG + chr8_2:21974144-21974163 Msa1239870:intron 35.0%
TCACCGACACTTTAAATTGA+AGG + chr8_2:21974224-21974243 Msa1239870:intron 35.0%
GTCGAACATCTAACATATGT+CGG - chr8_2:21974314-21974333 None:intergenic 35.0%
ATGGAACCGTTAAGAAGAAA+AGG + chr8_2:21974720-21974739 Msa1239870:CDS 35.0%
TGGAACCGTTAAGAAGAAAA+GGG + chr8_2:21974721-21974740 Msa1239870:CDS 35.0%
! TCTACCCCTTTTCTTCTTAA+CGG - chr8_2:21974729-21974748 None:intergenic 35.0%
! GATGAGAAGTCTTTAGAAGA+AGG - chr8_2:21974824-21974843 None:intergenic 35.0%
TGGATCATCTAGGTAATTGT+TGG + chr8_2:21974900-21974919 Msa1239870:intron 35.0%
GATTTAATGCTCTTGTTGGT+TGG + chr8_2:21974936-21974955 Msa1239870:intron 35.0%
TGGATTGAAGGAAAGTAGTT+CGG - chr8_2:21975100-21975119 None:intergenic 35.0%
ACCTAGAAAGTTGTAAACTC+GGG - chr8_2:21975239-21975258 None:intergenic 35.0%
! CGAAATGGTGACTTTTGTTA+TGG + chr8_2:21975891-21975910 Msa1239870:intron 35.0%
! TCACCATTTCACACTTGTTA+AGG - chr8_2:21976104-21976123 None:intergenic 35.0%
! ACTTTTGCAGGTGAAATGAA+TGG + chr8_2:21976292-21976311 Msa1239870:intron 35.0%
! CTTTTGCAGGTGAAATGAAT+GGG + chr8_2:21976293-21976312 Msa1239870:intron 35.0%
AGGAAGGTAAGAATAAAGGA+CGG - chr8_2:21976394-21976413 None:intergenic 35.0%
GCTTAGGAAGGTAAGAATAA+AGG - chr8_2:21976398-21976417 None:intergenic 35.0%
!! TGCTATACTCTTTGGTTTGT+AGG + chr8_2:21976473-21976492 Msa1239870:intron 35.0%
TAAACCCTAACATTGCTTGA+TGG + chr8_2:21977175-21977194 Msa1239870:intron 35.0%
GAAACCATCAAGCAATGTTA+GGG - chr8_2:21977182-21977201 None:intergenic 35.0%
AGAAACCATCAAGCAATGTT+AGG - chr8_2:21977183-21977202 None:intergenic 35.0%
TCAAATATCAGCTCAGACTA+TGG - chr8_2:21977560-21977579 None:intergenic 35.0%
TAGTCTGAGCTGATATTTGA+TGG + chr8_2:21977560-21977579 Msa1239870:intron 35.0%
TACAGTTCCAAACTCAATAG+CGG - chr8_2:21977600-21977619 None:intergenic 35.0%
TCTTCTAAATATGCTCTTGC+AGG + chr8_2:21977680-21977699 Msa1239870:intron 35.0%
CTTCTAAATATGCTCTTGCA+GGG + chr8_2:21977681-21977700 Msa1239870:intron 35.0%
! TTTGAGATACTTTCCTTGTC+TGG + chr8_2:21977708-21977727 Msa1239870:CDS 35.0%
ATCCTTTCACTCTTTACACT+TGG + chr8_2:21977873-21977892 Msa1239870:intron 35.0%
TCCTTTCACTCTTTACACTT+GGG + chr8_2:21977874-21977893 Msa1239870:intron 35.0%
ACTATATTAAGGGGAAATGG+TGG - chr8_2:21977951-21977970 None:intergenic 35.0%
GCAACTATATTAAGGGGAAA+TGG - chr8_2:21977954-21977973 None:intergenic 35.0%
!! GAGATCGTTTTTGTGTAAGT+AGG + chr8_2:21978256-21978275 Msa1239870:intron 35.0%
TACAGTGTTCATGTTTGTGT+CGG - chr8_2:21978309-21978328 None:intergenic 35.0%
ACAAACATGAACACTGTACA+TGG + chr8_2:21978311-21978330 Msa1239870:intron 35.0%
GATGCAACACTTAAGATTGA+AGG - chr8_2:21978420-21978439 None:intergenic 35.0%
!!! TCCTTGTTTTCAGATCTTGA+TGG - chr8_2:21978517-21978536 None:intergenic 35.0%
! TTCTCAGCACTATTAGTTTG+GGG - chr8_2:21978608-21978627 None:intergenic 35.0%
CTTTCTCAGCACTATTAGTT+TGG - chr8_2:21978610-21978629 None:intergenic 35.0%
! AACTAATAGTGCTGAGAAAG+AGG + chr8_2:21978610-21978629 Msa1239870:CDS 35.0%
TCTCAGTTGTAAATGTTGTC+AGG - chr8_2:21978834-21978853 None:intergenic 35.0%
ATTGTTCCAAATCTGTTCTC+TGG + chr8_2:21978896-21978915 Msa1239870:three_prime_UTR 35.0%
CGTAAGTAAATAGGCAAACA+AGG - chr8_2:21979075-21979094 None:intergenic 35.0%
AGAAGAAGATTGGTGAAGTG+TGG + chr8_2:21973418-21973437 Msa1239870:five_prime_UTR 40.0%
GCTTCTGTCTGAGAAATATC+TGG + chr8_2:21973686-21973705 Msa1239870:intron 40.0%
GATCACACAAATGAGGAAGA+AGG - chr8_2:21974089-21974108 None:intergenic 40.0%
AAACGCAATCACATGTGTCA+CGG - chr8_2:21974336-21974355 None:intergenic 40.0%
CTTTCTTGGATTGTAGGTGT+TGG + chr8_2:21974456-21974475 Msa1239870:intron 40.0%
ATATGCATGGAAGGAAGAGA+AGG + chr8_2:21974515-21974534 Msa1239870:exon 40.0%
!! AAGAGAAGGTATCAATCCTG+CGG + chr8_2:21974529-21974548 Msa1239870:CDS 40.0%
! TGGTTTGGAACTTCATTCCT+TGG - chr8_2:21974599-21974618 None:intergenic 40.0%
AAGGAATGAAGTTCCAAACC+AGG + chr8_2:21974598-21974617 Msa1239870:CDS 40.0%
GGAACCGTTAAGAAGAAAAG+GGG + chr8_2:21974722-21974741 Msa1239870:CDS 40.0%
GAAATAGGCAATGGTGACAA+TGG - chr8_2:21974788-21974807 None:intergenic 40.0%
GCTGAAGATGAAATAGGCAA+TGG - chr8_2:21974797-21974816 None:intergenic 40.0%
! GAGAAGTCTTTAGAAGAAGG+CGG - chr8_2:21974821-21974840 None:intergenic 40.0%
GAGGGCGAAAAAATTTGTGA+TGG + chr8_2:21974880-21974899 Msa1239870:CDS 40.0%
! GTTTGAAGTGTATCTCTGTC+TGG + chr8_2:21975020-21975039 Msa1239870:intron 40.0%
!! GAGCTTTTGTTGTGGATTGA+AGG - chr8_2:21975112-21975131 None:intergenic 40.0%
CCTAGAAAGTTGTAAACTCG+GGG - chr8_2:21975238-21975257 None:intergenic 40.0%
! GACATCTTTTGACCCAATAG+CGG - chr8_2:21975438-21975457 None:intergenic 40.0%
GAATTACAATGAGGGTAGTG+TGG + chr8_2:21975807-21975826 Msa1239870:intron 40.0%
TTTCGCGCTTATTAAGGTAG+CGG - chr8_2:21975876-21975895 None:intergenic 40.0%
CTACCTTAATAAGCGCGAAA+TGG + chr8_2:21975876-21975895 Msa1239870:intron 40.0%
TCACCATTTCGCGCTTATTA+AGG - chr8_2:21975882-21975901 None:intergenic 40.0%
!! TTGCTTTTAAACAGTAGCGG+AGG + chr8_2:21976127-21976146 Msa1239870:intron 40.0%
!! TGCTTTTAAACAGTAGCGGA+GGG + chr8_2:21976128-21976147 Msa1239870:intron 40.0%
! GCATTGACAGTGATGAAATG+CGG - chr8_2:21976343-21976362 None:intergenic 40.0%
CATTTCATCACTGTCAATGC+CGG + chr8_2:21976343-21976362 Msa1239870:CDS 40.0%
GAAGGTAAGAATAAAGGACG+GGG - chr8_2:21976392-21976411 None:intergenic 40.0%
GGAAGGTAAGAATAAAGGAC+GGG - chr8_2:21976393-21976412 None:intergenic 40.0%
GATAAGACACATATTGCTCG+CGG - chr8_2:21976537-21976556 None:intergenic 40.0%
GCGAGCAATATGTGTCTTAT+CGG + chr8_2:21976536-21976555 Msa1239870:CDS 40.0%
! ATATGTGTCTTATCGGCTAC+TGG + chr8_2:21976543-21976562 Msa1239870:CDS 40.0%
! TCAAGATGGTGAGAAGCATA+TGG + chr8_2:21976875-21976894 Msa1239870:intron 40.0%
TAGTCAATAGTGGCTGATAG+CGG + chr8_2:21977016-21977035 Msa1239870:intron 40.0%
!!! AAACCTCTTTGAGGGCATTT+TGG + chr8_2:21977144-21977163 Msa1239870:intron 40.0%
!!! AACCTCTTTGAGGGCATTTT+GGG + chr8_2:21977145-21977164 Msa1239870:intron 40.0%
TCCTCTGTTGTATGGTTTCT+CGG + chr8_2:21977220-21977239 Msa1239870:intron 40.0%
CTTAAGTCCGCTATTGAGTT+TGG + chr8_2:21977590-21977609 Msa1239870:intron 40.0%
ATGCCTACTGATACTAACCA+AGG + chr8_2:21977738-21977757 Msa1239870:CDS 40.0%
GTTCCTTGGTTAGTATCAGT+AGG - chr8_2:21977744-21977763 None:intergenic 40.0%
TAACCAAGGAACAAGAAGCA+GGG + chr8_2:21977752-21977771 Msa1239870:CDS 40.0%
ACCCAAGTGTAAAGAGTGAA+AGG - chr8_2:21977878-21977897 None:intergenic 40.0%
GTTGCATCTTCCTCAAAAGA+AGG + chr8_2:21978432-21978451 Msa1239870:intron 40.0%
! TCTTGGTTTATTTCAGGTGG+TGG + chr8_2:21978469-21978488 Msa1239870:intron 40.0%
GCCATCAAGATCTGAAAACA+AGG + chr8_2:21978513-21978532 Msa1239870:CDS 40.0%
GGACATGTACTGCAAAATTC+TGG + chr8_2:21978650-21978669 Msa1239870:CDS 40.0%
CAGATACCAGAGAACAGATT+TGG - chr8_2:21978905-21978924 None:intergenic 40.0%
! AGCATCTTTGATTTATCGGC+TGG + chr8_2:21978978-21978997 Msa1239870:three_prime_UTR 40.0%
! GATTTATCGGCTGGTTACTT+AGG + chr8_2:21978987-21979006 Msa1239870:three_prime_UTR 40.0%
AAATAGGCAAACAAGGACCA+AGG - chr8_2:21979068-21979087 None:intergenic 40.0%
AAGTGTGGAATCACAGTGAC+AGG + chr8_2:21973433-21973452 Msa1239870:five_prime_UTR 45.0%
GAAAATGCTGGGTATGAAGC+AGG + chr8_2:21973601-21973620 Msa1239870:intron 45.0%
!! CATGTTTGGTGTTTGACACG+TGG + chr8_2:21974247-21974266 Msa1239870:intron 45.0%
TTGTGTCGGGTGTTTGTATC+TGG + chr8_2:21974391-21974410 Msa1239870:intron 45.0%
AGGTATCAATCCTGCGGTTA+CGG + chr8_2:21974535-21974554 Msa1239870:CDS 45.0%
TCAGGGTTATGAACCTGGTT+TGG - chr8_2:21974614-21974633 None:intergenic 45.0%
CTACTTCAGGGTTATGAACC+TGG - chr8_2:21974619-21974638 None:intergenic 45.0%
AGAAGAAAAGGGGTAGACCA+AGG + chr8_2:21974732-21974751 Msa1239870:CDS 45.0%
AGGGGTAGACCAAGGAAATA+TGG + chr8_2:21974740-21974759 Msa1239870:CDS 45.0%
GGGGTAGACCAAGGAAATAT+GGG + chr8_2:21974741-21974760 Msa1239870:CDS 45.0%
CAAGGAAATATGGGCCAGAT+GGG + chr8_2:21974750-21974769 Msa1239870:CDS 45.0%
CTGTGGTTTCACTTGCTTCA+CGG - chr8_2:21974846-21974865 None:intergenic 45.0%
GTGAAGCAAGTGAAACCACA+GGG + chr8_2:21974845-21974864 Msa1239870:CDS 45.0%
TGAAGCAAGTGAAACCACAG+GGG + chr8_2:21974846-21974865 Msa1239870:CDS 45.0%
ACAGGGGATGGAATACAAGA+GGG + chr8_2:21974862-21974881 Msa1239870:CDS 45.0%
CCCCGAGTTTACAACTTTCT+AGG + chr8_2:21975235-21975254 Msa1239870:intron 45.0%
GAAATGAATGGGCACTCTGA+TGG + chr8_2:21976304-21976323 Msa1239870:CDS 45.0%
TGCATTCAAACATACCTCGC+CGG - chr8_2:21976365-21976384 None:intergenic 45.0%
GTAAGAATAAAGGACGGGGA+TGG - chr8_2:21976388-21976407 None:intergenic 45.0%
TCCGTCATCCAGATTCTTCT+GGG + chr8_2:21976586-21976605 Msa1239870:CDS 45.0%
! AAAGTACCCCCAGAAGAATC+TGG - chr8_2:21976597-21976616 None:intergenic 45.0%
GATTTACTGACGCACCTCAT+AGG - chr8_2:21976622-21976641 None:intergenic 45.0%
AGTCAGGAAATCAGCAGTGT+TGG + chr8_2:21976970-21976989 Msa1239870:intron 45.0%
!!! ACCTCTTTGAGGGCATTTTG+GGG + chr8_2:21977146-21977165 Msa1239870:intron 45.0%
ACCGAGAAACCATACAACAG+AGG - chr8_2:21977224-21977243 None:intergenic 45.0%
CTATTTGTCACACCGCTATC+CGG + chr8_2:21977473-21977492 Msa1239870:intron 45.0%
TATTTGTCACACCGCTATCC+GGG + chr8_2:21977474-21977493 Msa1239870:intron 45.0%
TAGTAGTCAATCCCGGATAG+CGG - chr8_2:21977488-21977507 None:intergenic 45.0%
AGGCATGAATGATCCAGACA+AGG - chr8_2:21977724-21977743 None:intergenic 45.0%
CTAACCAAGGAACAAGAAGC+AGG + chr8_2:21977751-21977770 Msa1239870:CDS 45.0%
GAAAGGATGTTTACCTGCAC+AGG - chr8_2:21977861-21977880 None:intergenic 45.0%
!! TGTTTGTGTCGGTGCTGTAT+AGG - chr8_2:21978298-21978317 None:intergenic 45.0%
! TGGTTTATTTCAGGTGGTGG+TGG + chr8_2:21978472-21978491 Msa1239870:intron 45.0%
! GGTTTATTTCAGGTGGTGGT+GGG + chr8_2:21978473-21978492 Msa1239870:intron 45.0%
GCTGGTGCATAATCAGACTT+AGG - chr8_2:21978542-21978561 None:intergenic 45.0%
TGCAATGGCCTGAGTAAATG+TGG - chr8_2:21978564-21978583 None:intergenic 45.0%
! TCAGCACTATTAGTTTGGGG+TGG - chr8_2:21978605-21978624 None:intergenic 45.0%
TATGCCGGACACAAGAAAAG+CGG + chr8_2:21978745-21978764 Msa1239870:CDS 45.0%
! CAGTGTTGTTAGTTGCAGCT+AGG + chr8_2:21978952-21978971 Msa1239870:three_prime_UTR 45.0%
CTTAGGTAGATGCAGCACAA+TGG + chr8_2:21979004-21979023 Msa1239870:three_prime_UTR 45.0%
!! AAAAACAATTAATATATTTA+TGG - chr8_2:21973512-21973531 None:intergenic 5.0%
TCGACGTGTCAGTGTTGTGT+CGG + chr8_2:21974377-21974396 Msa1239870:intron 50.0%
TGATATGCGGATGGAGCTTC+TGG - chr8_2:21974569-21974588 None:intergenic 50.0%
! CCTTGGTGCGACATGATATG+CGG - chr8_2:21974582-21974601 None:intergenic 50.0%
! TGATACTGTCGGTGTTTCCC+CGG + chr8_2:21974682-21974701 Msa1239870:CDS 50.0%
ATCCAAACCTACACTCACCG+GGG - chr8_2:21974702-21974721 None:intergenic 50.0%
CATCCAAACCTACACTCACC+GGG - chr8_2:21974703-21974722 None:intergenic 50.0%
CCATCCAAACCTACACTCAC+CGG - chr8_2:21974704-21974723 None:intergenic 50.0%
CCATCTGGCCCATATTTCCT+TGG - chr8_2:21974752-21974771 None:intergenic 50.0%
CCAAGGAAATATGGGCCAGA+TGG + chr8_2:21974749-21974768 Msa1239870:CDS 50.0%
GGCGGAGCTGAAGATGAAAT+AGG - chr8_2:21974803-21974822 None:intergenic 50.0%
CGTGAAGCAAGTGAAACCAC+AGG + chr8_2:21974844-21974863 Msa1239870:CDS 50.0%
CTCTTGTATTCCATCCCCTG+TGG - chr8_2:21974863-21974882 None:intergenic 50.0%
CACAGGGGATGGAATACAAG+AGG + chr8_2:21974861-21974880 Msa1239870:CDS 50.0%
CTCCGTCATCCAGATTCTTC+TGG + chr8_2:21976585-21976604 Msa1239870:CDS 50.0%
CCCCAGAAGAATCTGGATGA+CGG - chr8_2:21976590-21976609 None:intergenic 50.0%
CCGTCATCCAGATTCTTCTG+GGG + chr8_2:21976587-21976606 Msa1239870:CDS 50.0%
CGTCATCCAGATTCTTCTGG+GGG + chr8_2:21976588-21976607 Msa1239870:CDS 50.0%
!! TGGGGGTACTTTGACCTATG+AGG + chr8_2:21976605-21976624 Msa1239870:CDS 50.0%
TCCCCAAAATGCCCTCAAAG+AGG - chr8_2:21977150-21977169 None:intergenic 50.0%
AGGTGGAATGAGTGTCTCAC+TGG + chr8_2:21977776-21977795 Msa1239870:CDS 50.0%
GATGTTTACCTGCACAGGAG+TGG - chr8_2:21977856-21977875 None:intergenic 50.0%
AGCATGAGCACACGTGAACT+TGG - chr8_2:21977917-21977936 None:intergenic 50.0%
AGTTCACGTGTGCTCATGCT+CGG + chr8_2:21977917-21977936 Msa1239870:intron 50.0%
!! TTGGTGTCAGACACACGTGT+TGG + chr8_2:21978389-21978408 Msa1239870:intron 50.0%
! TTCAGATCTTGATGGCCGCT+AGG - chr8_2:21978509-21978528 None:intergenic 50.0%
TGCACCAGCCACATTTACTC+AGG + chr8_2:21978553-21978572 Msa1239870:CDS 50.0%
ATGGCCTGAGTAAATGTGGC+TGG - chr8_2:21978560-21978579 None:intergenic 50.0%
! AGGTGCTGCAGATACTGCAA+TGG - chr8_2:21978579-21978598 None:intergenic 50.0%
! GCACTATTAGTTTGGGGTGG+CGG - chr8_2:21978602-21978621 None:intergenic 50.0%
TGCTGAGAAAGAGGATGCCA+TGG + chr8_2:21978619-21978638 Msa1239870:CDS 50.0%
GCTGAGAAAGAGGATGCCAT+GGG + chr8_2:21978620-21978639 Msa1239870:CDS 50.0%
! TTTTCCCTTCGAAAGGCGGT+GGG - chr8_2:21978707-21978726 None:intergenic 50.0%
! CCAGTTTTCCCTTCGAAAGG+CGG - chr8_2:21978711-21978730 None:intergenic 50.0%
CGCCTTTCGAAGGGAAAACT+GGG + chr8_2:21978709-21978728 Msa1239870:CDS 50.0%
! GACCCAGTTTTCCCTTCGAA+AGG - chr8_2:21978714-21978733 None:intergenic 50.0%
GGTCAACATGCACTCTATGC+CGG + chr8_2:21978730-21978749 Msa1239870:CDS 50.0%
!!! GTAGCCGCTTTTCTTGTGTC+CGG - chr8_2:21978752-21978771 None:intergenic 50.0%
CGACGTGTCAGTGTTGTGTC+GGG + chr8_2:21974378-21974397 Msa1239870:intron 55.0%
GGTGCGACATGATATGCGGA+TGG - chr8_2:21974578-21974597 None:intergenic 55.0%
CCGCATATCATGTCGCACCA+AGG + chr8_2:21974579-21974598 Msa1239870:CDS 55.0%
CTGCAGCTGTGGCTACTTCA+GGG - chr8_2:21974631-21974650 None:intergenic 55.0%
AGCAGCAGTAGATCCTCCTG+CGG - chr8_2:21974654-21974673 None:intergenic 55.0%
GCTCCTGCTGCTGATACTGT+CGG + chr8_2:21974671-21974690 Msa1239870:CDS 55.0%
ACACCGACAGTATCAGCAGC+AGG - chr8_2:21974677-21974696 None:intergenic 55.0%
TTCCCCGGTGAGTGTAGGTT+TGG + chr8_2:21974697-21974716 Msa1239870:CDS 55.0%
CCGGTGAGTGTAGGTTTGGA+TGG + chr8_2:21974701-21974720 Msa1239870:CDS 55.0%
GGCATGTTGACAGACCCATC+TGG - chr8_2:21974767-21974786 None:intergenic 55.0%
GCAAGTGAAACCACAGGGGA+TGG + chr8_2:21974850-21974869 Msa1239870:CDS 55.0%
!! ATAGTGGCTGATAGCGGCGA+CGG + chr8_2:21977022-21977041 Msa1239870:intron 55.0%
CGCTAGGACGATTACCGTAG+CGG - chr8_2:21977049-21977068 None:intergenic 55.0%
CGCTACGGTAATCGTCCTAG+CGG + chr8_2:21977047-21977066 Msa1239870:intron 55.0%
! CTATTTGGTTCCGCACCGCT+AGG - chr8_2:21977065-21977084 None:intergenic 55.0%
AGCGGTGCGGAACCAAATAG+CGG + chr8_2:21977065-21977084 Msa1239870:intron 55.0%
CAGCTGAAGCAGCCGCTATT+TGG - chr8_2:21977080-21977099 None:intergenic 55.0%
CTGCCCTGCTTCTTGTTCCT+TGG - chr8_2:21977758-21977777 None:intergenic 55.0%
CAAGGAACAAGAAGCAGGGC+AGG + chr8_2:21977756-21977775 Msa1239870:CDS 55.0%
TATAGCTGCCACTCCTGTGC+AGG + chr8_2:21977845-21977864 Msa1239870:CDS 55.0%
GTGGGAAGCTTTCTGCCTAG+CGG + chr8_2:21978491-21978510 Msa1239870:CDS 55.0%
! CTATTAGTTTGGGGTGGCGG+AGG - chr8_2:21978599-21978618 None:intergenic 55.0%
GAGAAAGAGGATGCCATGGG+TGG + chr8_2:21978623-21978642 Msa1239870:CDS 55.0%
AAAGAGGATGCCATGGGTGG+CGG + chr8_2:21978626-21978645 Msa1239870:CDS 55.0%
! GTTTTCCCTTCGAAAGGCGG+TGG - chr8_2:21978708-21978727 None:intergenic 55.0%
CCGCCTTTCGAAGGGAAAAC+TGG + chr8_2:21978708-21978727 Msa1239870:CDS 55.0%
GCTGCAGCTGTGGCTACTTC+AGG - chr8_2:21974632-21974651 None:intergenic 60.0%
GGTGTTTCCCCGGTGAGTGT+AGG + chr8_2:21974692-21974711 Msa1239870:CDS 60.0%
CATCACTGTCAATGCCGGCG+AGG + chr8_2:21976348-21976367 Msa1239870:CDS 60.0%
CGGTAATCGTCCTAGCGGTG+CGG + chr8_2:21977052-21977071 Msa1239870:intron 60.0%
GGAACAAGAAGCAGGGCAGG+TGG + chr8_2:21977759-21977778 Msa1239870:CDS 60.0%
GTCTCACTGGCAAGCCCTGA+TGG + chr8_2:21977789-21977808 Msa1239870:CDS 60.0%
AGCCCTGATGGTCGCGTAGT+AGG + chr8_2:21977801-21977820 Msa1239870:CDS 60.0%
CGCCTACTACGCGACCATCA+GGG - chr8_2:21977806-21977825 None:intergenic 60.0%
CCTGATGGTCGCGTAGTAGG+CGG + chr8_2:21977804-21977823 Msa1239870:CDS 60.0%
GTAGTAGGCGGTGGAGTTGC+TGG + chr8_2:21977816-21977835 Msa1239870:CDS 60.0%
TACATGTCCACCGCCACCCA+TGG - chr8_2:21978639-21978658 None:intergenic 60.0%
TCCACCCACCGCCTTTCGAA+GGG + chr8_2:21978700-21978719 Msa1239870:CDS 60.0%
GGCGCTATCACCGTAACCGC+AGG - chr8_2:21974548-21974567 None:intergenic 65.0%
ATAGCGGCGACGGACCGCTA+CGG + chr8_2:21977032-21977051 Msa1239870:intron 65.0%
CCGCCTACTACGCGACCATC+AGG - chr8_2:21977807-21977826 None:intergenic 65.0%
GATGGTCGCGTAGTAGGCGG+TGG + chr8_2:21977807-21977826 Msa1239870:CDS 65.0%
CTTCGAAAGGCGGTGGGTGG+AGG - chr8_2:21978701-21978720 None:intergenic 65.0%
CTCCACCCACCGCCTTTCGA+AGG + chr8_2:21978699-21978718 Msa1239870:CDS 65.0%
TCCCTTCGAAAGGCGGTGGG+TGG - chr8_2:21978704-21978723 None:intergenic 65.0%
GTAGCCACAGCTGCAGCCGC+AGG + chr8_2:21974635-21974654 Msa1239870:CDS 70.0%
TCCTCCTGCGGCTGCAGCTG+TGG - chr8_2:21974642-21974661 None:intergenic 70.0%
! GAGGATGCCATGGGTGGCGG+TGG + chr8_2:21978629-21978648 Msa1239870:CDS 70.0%
GCCACAGCTGCAGCCGCAGG+AGG + chr8_2:21974638-21974657 Msa1239870:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 21973186 21979126 21973186 ID=Msa1239870;Name=Msa1239870
chr8_2 mRNA 21973186 21979126 21973186 ID=Msa1239870-mRNA-1;Parent=Msa1239870;Name=Msa1239870-mRNA-1;_AED=0.06;_eAED=0.06;_QI=149|1|1|1|0.66|0.57|7|324|357
chr8_2 exon 21973186 21973244 21973186 ID=Msa1239870-mRNA-1:exon:7832;Parent=Msa1239870-mRNA-1
chr8_2 exon 21973414 21973454 21973414 ID=Msa1239870-mRNA-1:exon:7833;Parent=Msa1239870-mRNA-1
chr8_2 exon 21974472 21974911 21974472 ID=Msa1239870-mRNA-1:exon:7834;Parent=Msa1239870-mRNA-1
chr8_2 exon 21976302 21976369 21976302 ID=Msa1239870-mRNA-1:exon:7835;Parent=Msa1239870-mRNA-1
chr8_2 exon 21976495 21976626 21976495 ID=Msa1239870-mRNA-1:exon:7836;Parent=Msa1239870-mRNA-1
chr8_2 exon 21977702 21977866 21977702 ID=Msa1239870-mRNA-1:exon:7837;Parent=Msa1239870-mRNA-1
chr8_2 exon 21978485 21979126 21978485 ID=Msa1239870-mRNA-1:exon:7838;Parent=Msa1239870-mRNA-1
chr8_2 five_prime_UTR 21973186 21973244 21973186 ID=Msa1239870-mRNA-1:five_prime_utr;Parent=Msa1239870-mRNA-1
chr8_2 five_prime_UTR 21973414 21973454 21973414 ID=Msa1239870-mRNA-1:five_prime_utr;Parent=Msa1239870-mRNA-1
chr8_2 five_prime_UTR 21974472 21974520 21974472 ID=Msa1239870-mRNA-1:five_prime_utr;Parent=Msa1239870-mRNA-1
chr8_2 CDS 21974521 21974911 21974521 ID=Msa1239870-mRNA-1:cds;Parent=Msa1239870-mRNA-1
chr8_2 CDS 21976302 21976369 21976302 ID=Msa1239870-mRNA-1:cds;Parent=Msa1239870-mRNA-1
chr8_2 CDS 21976495 21976626 21976495 ID=Msa1239870-mRNA-1:cds;Parent=Msa1239870-mRNA-1
chr8_2 CDS 21977702 21977866 21977702 ID=Msa1239870-mRNA-1:cds;Parent=Msa1239870-mRNA-1
chr8_2 CDS 21978485 21978802 21978485 ID=Msa1239870-mRNA-1:cds;Parent=Msa1239870-mRNA-1
chr8_2 three_prime_UTR 21978803 21979126 21978803 ID=Msa1239870-mRNA-1:three_prime_utr;Parent=Msa1239870-mRNA-1
Gene Sequence

>Msa1239870

ATGGAAGGAAGAGAAGGTATCAATCCTGCGGTTACGGTGATAGCGCCAGAAGCTCCATCCGCATATCATGTCGCACCAAGGAATGAAGTTCCAAACCAGGTTCATAACCCTGAAGTAGCCACAGCTGCAGCCGCAGGAGGATCTACTGCTGCTCCTGCTGCTGATACTGTCGGTGTTTCCCCGGTGAGTGTAGGTTTGGATGGAACCGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGGCCAGATGGGTCTGTCAACATGCCATTGTCACCATTGCCTATTTCATCTTCAGCTCCGCCTTCTTCTAAAGACTTCTCATCCGTGAAGCAAGTGAAACCACAGGGGATGGAATACAAGAGGGCGAAAAAATTTGTGATGGATCATCTAGGTGAAATGAATGGGCACTCTGATGGTACAAACTTTATGCCGCATTTCATCACTGTCAATGCCGGCGAGGATATTACAAATAAGGTGATATCATTTTCACAACAAGGGCCGCGAGCAATATGTGTCTTATCGGCTACTGGAGTGATTTCAAATGTGACTCTCCGTCATCCAGATTCTTCTGGGGGTACTTTGACCTATGAGGGTCGTTTTGAGATACTTTCCTTGTCTGGATCATTCATGCCTACTGATACTAACCAAGGAACAAGAAGCAGGGCAGGTGGAATGAGTGTCTCACTGGCAAGCCCTGATGGTCGCGTAGTAGGCGGTGGAGTTGCTGGTGTTCTTATAGCTGCCACTCCTGTGCAGGTGGTGGTGGGAAGCTTTCTGCCTAGCGGCCATCAAGATCTGAAAACAAGGAAGCCTAAGTCTGATTATGCACCAGCCACATTTACTCAGGCCATTGCAGTATCTGCAGCACCTCCGCCACCCCAAACTAATAGTGCTGAGAAAGAGGATGCCATGGGTGGCGGTGGACATGTACTGCAAAATTCTGGAACCCTTAACTCAAATTTCACTTCTCCTCCACCCACCGCCTTTCGAAGGGAAAACTGGGTCAACATGCACTCTATGCCGGACACAAGAAAAGCGGCTACTGATATTAACATATCTTTGCCTGATAATTAA

Protein sequence

>Msa1239870

MEGREGINPAVTVIAPEAPSAYHVAPRNEVPNQVHNPEVATAAAAGGSTAAPAADTVGVSPVSVGLDGTVKKKRGRPRKYGPDGSVNMPLSPLPISSSAPPSSKDFSSVKQVKPQGMEYKRAKKFVMDHLGEMNGHSDGTNFMPHFITVNAGEDITNKVISFSQQGPRAICVLSATGVISNVTLRHPDSSGGTLTYEGRFEILSLSGSFMPTDTNQGTRSRAGGMSVSLASPDGRVVGGGVAGVLIAATPVQVVVGSFLPSGHQDLKTRKPKSDYAPATFTQAIAVSAAPPPPQTNSAEKEDAMGGGGHVLQNSGTLNSNFTSPPPTAFRRENWVNMHSMPDTRKAATDINISLPDN*