Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0180780 | sp|P11432|ELI_PEA | 77.723 | 202 | 36 | 3 | 1 | 199 | 1 | 196 | 5.20e-98 | 285 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0180780 | A0A072VQ49 | 88.525 | 183 | 13 | 3 | 20 | 199 | 20 | 197 | 1.02e-100 | 298 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0005160 | Msa0180780 | 0.812923 | 3.319758e-51 | -8.615850e-47 |
| Msa0006820 | Msa0180780 | 0.807445 | 5.038446e-50 | -8.615850e-47 |
| Msa0016110 | Msa0180780 | 0.808609 | 2.847088e-50 | -8.615850e-47 |
| Msa0016160 | Msa0180780 | 0.804586 | 2.012119e-49 | -8.615850e-47 |
| Msa0021710 | Msa0180780 | 0.818511 | 1.886730e-52 | -8.615850e-47 |
| Msa0032450 | Msa0180780 | 0.838391 | 2.956456e-57 | -8.615850e-47 |
| Msa0039920 | Msa0180780 | 0.952726 | 1.299747e-110 | -8.615850e-47 |
| Msa0040090 | Msa0180780 | 0.936986 | 7.205861e-98 | -8.615850e-47 |
| Msa0046050 | Msa0180780 | 0.831037 | 2.094615e-55 | -8.615850e-47 |
| Msa0053210 | Msa0180780 | 0.806352 | 8.575478e-50 | -8.615850e-47 |
| Msa0057740 | Msa0180780 | 0.827630 | 1.406755e-54 | -8.615850e-47 |
| Msa0080620 | Msa0180780 | 0.836311 | 1.007982e-56 | -8.615850e-47 |
| Msa0087580 | Msa0180780 | 0.953188 | 4.744857e-111 | -8.615850e-47 |
| Msa0087780 | Msa0180780 | 0.936117 | 2.896122e-97 | -8.615850e-47 |
| Msa0087790 | Msa0180780 | 0.940434 | 2.348069e-100 | -8.615850e-47 |
| Msa0096020 | Msa0180780 | 0.842240 | 2.917450e-58 | -8.615850e-47 |
| Msa0096830 | Msa0180780 | 0.800170 | 1.633961e-48 | -8.615850e-47 |
| Msa0098700 | Msa0180780 | 0.816233 | 6.145049e-52 | -8.615850e-47 |
| Msa0103060 | Msa0180780 | 0.811956 | 5.402095e-51 | -8.615850e-47 |
| Msa0109870 | Msa0180780 | 0.809341 | 1.985018e-50 | -8.615850e-47 |
| Msa0116950 | Msa0180780 | 0.823450 | 1.376517e-53 | -8.615850e-47 |
| Msa0133450 | Msa0180780 | 0.835595 | 1.531698e-56 | -8.615850e-47 |
| Msa0134300 | Msa0180780 | 0.953363 | 3.233280e-111 | -8.615850e-47 |
| Msa0134380 | Msa0180780 | 0.935367 | 9.475970e-97 | -8.615850e-47 |
| Msa0134390 | Msa0180780 | 0.929381 | 7.540263e-93 | -8.615850e-47 |
| Msa0134400 | Msa0180780 | 0.906066 | 2.204877e-80 | -8.615850e-47 |
| Msa0134410 | Msa0180780 | 0.870870 | 1.052541e-66 | -8.615850e-47 |
| Msa0134420 | Msa0180780 | 0.937081 | 6.175478e-98 | -8.615850e-47 |
| Msa0137010 | Msa0180780 | 0.833794 | 4.346604e-56 | -8.615850e-47 |
| Msa0156260 | Msa0180780 | 0.814399 | 1.571404e-51 | -8.615850e-47 |
| Msa0160470 | Msa0180780 | 0.834811 | 2.414503e-56 | -8.615850e-47 |
| Msa0168470 | Msa0180780 | 0.807408 | 5.129047e-50 | -8.615850e-47 |
| Msa0175720 | Msa0180780 | 0.849138 | 3.920224e-60 | -8.615850e-47 |
| Msa0180590 | Msa0180780 | 0.913361 | 6.725813e-84 | -8.615850e-47 |
| Msa0180600 | Msa0180780 | 0.942641 | 5.012091e-102 | -8.615850e-47 |
| Msa0180780 | Msa0186510 | 0.870430 | 1.467807e-66 | -8.615850e-47 |
| Msa0180780 | Msa0197730 | 0.820593 | 6.319378e-53 | -8.615850e-47 |
| Msa0180780 | Msa0210880 | 0.804223 | 2.395380e-49 | -8.615850e-47 |
| Msa0180780 | Msa0229750 | 0.814702 | 1.346697e-51 | -8.615850e-47 |
| Msa0180780 | Msa0230980 | 0.848111 | 7.545292e-60 | -8.615850e-47 |
| Msa0180780 | Msa0238960 | 0.823907 | 1.075411e-53 | -8.615850e-47 |
| Msa0180780 | Msa0243160 | 0.820649 | 6.133474e-53 | -8.615850e-47 |
| Msa0180780 | Msa0270460 | 0.844865 | 5.800237e-59 | -8.615850e-47 |
| Msa0180780 | Msa0276800 | 0.802140 | 6.462453e-49 | -8.615850e-47 |
| Msa0180780 | Msa0290600 | 0.804493 | 2.103446e-49 | -8.615850e-47 |
| Msa0180780 | Msa0293000 | 0.813096 | 3.043168e-51 | -8.615850e-47 |
| Msa0180780 | Msa0309060 | 0.847823 | 9.061998e-60 | -8.615850e-47 |
| Msa0180780 | Msa0316720 | 0.817316 | 3.512198e-52 | -8.615850e-47 |
| Msa0180780 | Msa0317360 | 0.800569 | 1.355592e-48 | -8.615850e-47 |
| Msa0180780 | Msa0335860 | 0.811285 | 7.556367e-51 | -8.615850e-47 |
| Msa0180780 | Msa0337300 | 0.806706 | 7.221312e-50 | -8.615850e-47 |
| Msa0180780 | Msa0348760 | 0.801150 | 1.031185e-48 | -8.615850e-47 |
| Msa0180780 | Msa0378670 | 0.827712 | 1.344944e-54 | -8.615850e-47 |
| Msa0180780 | Msa0378700 | 0.843287 | 1.537493e-58 | -8.615850e-47 |
| Msa0180780 | Msa0385770 | 0.846793 | 1.737236e-59 | -8.615850e-47 |
| Msa0180780 | Msa0387740 | 0.805907 | 1.063993e-49 | -8.615850e-47 |
| Msa0180780 | Msa0391160 | 0.827044 | 1.944239e-54 | -8.615850e-47 |
| Msa0180780 | Msa0415200 | 0.802339 | 5.879891e-49 | -8.615850e-47 |
| Msa0180780 | Msa0420280 | 0.800631 | 1.316490e-48 | -8.615850e-47 |
| Msa0180780 | Msa0426860 | 0.835258 | 1.863253e-56 | -8.615850e-47 |
| Msa0180780 | Msa0426890 | 0.820745 | 5.831093e-53 | -8.615850e-47 |
| Msa0180780 | Msa0428330 | 0.836247 | 1.046221e-56 | -8.615850e-47 |
| Msa0180780 | Msa0430040 | 0.829776 | 4.259692e-55 | -8.615850e-47 |
| Msa0180780 | Msa0431940 | 0.814278 | 1.671217e-51 | -8.615850e-47 |
| Msa0180780 | Msa0433270 | 0.851981 | 6.227040e-61 | -8.615850e-47 |
| Msa0180780 | Msa0434090 | -0.812738 | 3.644700e-51 | -8.615850e-47 |
| Msa0180780 | Msa0437790 | 0.831662 | 1.469817e-55 | -8.615850e-47 |
| Msa0180780 | Msa0456480 | 0.840323 | 9.316069e-58 | -8.615850e-47 |
| Msa0180780 | Msa0463540 | 0.807768 | 4.302179e-50 | -8.615850e-47 |
| Msa0180780 | Msa0469840 | 0.808330 | 3.266457e-50 | -8.615850e-47 |
| Msa0180780 | Msa0477900 | -0.805813 | 1.113765e-49 | -8.615850e-47 |
| Msa0180780 | Msa0481050 | 0.821791 | 3.346758e-53 | -8.615850e-47 |
| Msa0180780 | Msa0500490 | 0.828246 | 1.000044e-54 | -8.615850e-47 |
| Msa0180780 | Msa0510550 | 0.811356 | 7.294051e-51 | -8.615850e-47 |
| Msa0180780 | Msa0511600 | 0.846475 | 2.122661e-59 | -8.615850e-47 |
| Msa0180780 | Msa0515420 | 0.802684 | 4.991253e-49 | -8.615850e-47 |
| Msa0180780 | Msa0519060 | 0.814812 | 1.273061e-51 | -8.615850e-47 |
| Msa0180780 | Msa0521940 | -0.826253 | 3.001594e-54 | -8.615850e-47 |
| Msa0180780 | Msa0580540 | 0.871171 | 8.375779e-67 | -8.615850e-47 |
| Msa0180780 | Msa0598470 | 0.807413 | 5.116574e-50 | -8.615850e-47 |
| Msa0180780 | Msa0615850 | 0.828872 | 7.059753e-55 | -8.615850e-47 |
| Msa0180780 | Msa0617120 | 0.865227 | 6.881840e-65 | -8.615850e-47 |
| Msa0180780 | Msa0621780 | 0.877895 | 4.353703e-69 | -8.615850e-47 |
| Msa0180780 | Msa0638040 | 0.802844 | 4.626061e-49 | -8.615850e-47 |
| Msa0180780 | Msa0677250 | 0.807559 | 4.765577e-50 | -8.615850e-47 |
| Msa0180780 | Msa0691100 | 0.808413 | 3.134952e-50 | -8.615850e-47 |
| Msa0180780 | Msa0698900 | 0.833564 | 4.959321e-56 | -8.615850e-47 |
| Msa0180780 | Msa0704780 | 0.814500 | 1.492391e-51 | -8.615850e-47 |
| Msa0180780 | Msa0712670 | 0.826673 | 2.384939e-54 | -8.615850e-47 |
| Msa0180780 | Msa0747900 | 0.801761 | 7.729918e-49 | -8.615850e-47 |
| Msa0180780 | Msa0748980 | 0.802156 | 6.412522e-49 | -8.615850e-47 |
| Msa0180780 | Msa0752830 | 0.816039 | 6.790209e-52 | -8.615850e-47 |
| Msa0180780 | Msa0754350 | 0.852163 | 5.527214e-61 | -8.615850e-47 |
| Msa0180780 | Msa0754790 | 0.825825 | 3.794831e-54 | -8.615850e-47 |
| Msa0180780 | Msa0754840 | 0.814015 | 1.910420e-51 | -8.615850e-47 |
| Msa0180780 | Msa0756440 | 0.818516 | 1.882393e-52 | -8.615850e-47 |
| Msa0180780 | Msa0776290 | 0.805664 | 1.197097e-49 | -8.615850e-47 |
| Msa0180780 | Msa0776590 | 0.848140 | 7.410564e-60 | -8.615850e-47 |
| Msa0180780 | Msa0793100 | 0.804661 | 1.940793e-49 | -8.615850e-47 |
| Msa0180780 | Msa0795710 | 0.877464 | 6.151972e-69 | -8.615850e-47 |
| Msa0180780 | Msa0813630 | 0.803157 | 3.986141e-49 | -8.615850e-47 |
| Msa0180780 | Msa0822370 | 0.800483 | 1.411372e-48 | -8.615850e-47 |
| Msa0180780 | Msa0825520 | 0.809233 | 2.094143e-50 | -8.615850e-47 |
| Msa0180780 | Msa0825960 | 0.810342 | 1.209020e-50 | -8.615850e-47 |
| Msa0180780 | Msa0828810 | 0.810176 | 1.312749e-50 | -8.615850e-47 |
| Msa0180780 | Msa0833450 | 0.860695 | 1.726563e-63 | -8.615850e-47 |
| Msa0180780 | Msa0833910 | 0.834890 | 2.307089e-56 | -8.615850e-47 |
| Msa0180780 | Msa0834160 | 0.823337 | 1.462534e-53 | -8.615850e-47 |
| Msa0180780 | Msa0835550 | 0.810892 | 9.193903e-51 | -8.615850e-47 |
| Msa0180780 | Msa0848860 | 0.810777 | 9.736181e-51 | -8.615850e-47 |
| Msa0180780 | Msa0854190 | 0.822654 | 2.110267e-53 | -8.615850e-47 |
| Msa0180780 | Msa0864730 | 0.811016 | 8.642312e-51 | -8.615850e-47 |
| Msa0180780 | Msa0864750 | 0.807625 | 4.613811e-50 | -8.615850e-47 |
| Msa0180780 | Msa0865280 | 0.801676 | 8.045867e-49 | -8.615850e-47 |
| Msa0180780 | Msa0866510 | 0.839225 | 1.799371e-57 | -8.615850e-47 |
| Msa0180780 | Msa0899080 | 0.812732 | 3.656865e-51 | -8.615850e-47 |
| Msa0180780 | Msa0906310 | 0.804752 | 1.857544e-49 | -8.615850e-47 |
| Msa0180780 | Msa0912110 | 0.809340 | 1.985636e-50 | -8.615850e-47 |
| Msa0180780 | Msa0913120 | 0.819870 | 9.253947e-53 | -8.615850e-47 |
| Msa0180780 | Msa0927890 | 0.800888 | 1.166757e-48 | -8.615850e-47 |
| Msa0180780 | Msa0930950 | 0.843820 | 1.107761e-58 | -8.615850e-47 |
| Msa0180780 | Msa0964650 | 0.804718 | 1.888771e-49 | -8.615850e-47 |
| Msa0180780 | Msa0966410 | 0.829196 | 5.892843e-55 | -8.615850e-47 |
| Msa0180780 | Msa0975550 | 0.811806 | 5.823516e-51 | -8.615850e-47 |
| Msa0180780 | Msa0999480 | 0.822689 | 2.070814e-53 | -8.615850e-47 |
| Msa0180780 | Msa1019220 | -0.815445 | 9.210614e-52 | -8.615850e-47 |
| Msa0180780 | Msa1019230 | -0.820979 | 5.150403e-53 | -8.615850e-47 |
| Msa0180780 | Msa1019370 | 0.828263 | 9.910558e-55 | -8.615850e-47 |
| Msa0180780 | Msa1036020 | -0.815617 | 8.433601e-52 | -8.615850e-47 |
| Msa0180780 | Msa1040390 | 0.819036 | 1.434094e-52 | -8.615850e-47 |
| Msa0180780 | Msa1057320 | 0.819895 | 9.134135e-53 | -8.615850e-47 |
| Msa0180780 | Msa1057340 | 0.815974 | 7.023123e-52 | -8.615850e-47 |
| Msa0180780 | Msa1076280 | -0.809978 | 1.448151e-50 | -8.615850e-47 |
| Msa0180780 | Msa1083140 | 0.828424 | 9.057853e-55 | -8.615850e-47 |
| Msa0180780 | Msa1102200 | 0.831029 | 2.104332e-55 | -8.615850e-47 |
| Msa0180780 | Msa1104130 | -0.808267 | 3.369172e-50 | -8.615850e-47 |
| Msa0180780 | Msa1122550 | -0.807416 | 5.110152e-50 | -8.615850e-47 |
| Msa0180780 | Msa1127900 | 0.829496 | 4.983755e-55 | -8.615850e-47 |
| Msa0180780 | Msa1130660 | 0.807936 | 3.962166e-50 | -8.615850e-47 |
| Msa0180780 | Msa1132540 | 0.805956 | 1.039098e-49 | -8.615850e-47 |
| Msa0180780 | Msa1133440 | 0.829136 | 6.093371e-55 | -8.615850e-47 |
| Msa0180780 | Msa1147870 | 0.817635 | 2.976492e-52 | -8.615850e-47 |
| Msa0180780 | Msa1165810 | 0.835846 | 1.322668e-56 | -8.615850e-47 |
| Msa0180780 | Msa1173410 | 0.807791 | 4.253394e-50 | -8.615850e-47 |
| Msa0180780 | Msa1187810 | 0.825973 | 3.499055e-54 | -8.615850e-47 |
| Msa0180780 | Msa1195860 | 0.818542 | 1.856558e-52 | -8.615850e-47 |
| Msa0180780 | Msa1202220 | 0.811479 | 6.860256e-51 | -8.615850e-47 |
| Msa0180780 | Msa1203840 | 0.813479 | 2.507145e-51 | -8.615850e-47 |
| Msa0180780 | Msa1203860 | 0.843310 | 1.516227e-58 | -8.615850e-47 |
| Msa0180780 | Msa1209240 | 0.818383 | 2.016889e-52 | -8.615850e-47 |
| Msa0180780 | Msa1215540 | 0.816683 | 4.874082e-52 | -8.615850e-47 |
| Msa0180780 | Msa1219060 | 0.823000 | 1.752360e-53 | -8.615850e-47 |
| Msa0180780 | Msa1220740 | 0.819698 | 1.012846e-52 | -8.615850e-47 |
| Msa0180780 | Msa1242990 | 0.800089 | 1.697520e-48 | -8.615850e-47 |
| Msa0180780 | Msa1243630 | 0.829619 | 4.652604e-55 | -8.615850e-47 |
| Msa0180780 | Msa1244220 | 0.832896 | 7.275528e-56 | -8.615850e-47 |
| Msa0180780 | Msa1244660 | 0.813254 | 2.809189e-51 | -8.615850e-47 |
| Msa0180780 | Msa1263590 | 0.811343 | 7.341585e-51 | -8.615850e-47 |
| Msa0180780 | Msa1263670 | 0.803715 | 3.053627e-49 | -8.615850e-47 |
| Msa0180780 | Msa1269730 | 0.801878 | 7.315365e-49 | -8.615850e-47 |
| Msa0180780 | Msa1283120 | 0.857268 | 1.832486e-62 | -8.615850e-47 |
| Msa0180780 | Msa1296270 | 0.814269 | 1.678730e-51 | -8.615850e-47 |
| Msa0180780 | Msa1308010 | 0.805549 | 1.265265e-49 | -8.615850e-47 |
| Msa0180780 | Msa1327040 | 0.815389 | 9.481778e-52 | -8.615850e-47 |
| Msa0180780 | Msa1330910 | 0.835507 | 1.611531e-56 | -8.615850e-47 |
| Msa0180780 | Msa1332690 | 0.812461 | 4.190530e-51 | -8.615850e-47 |
| Msa0180780 | Msa1334650 | 0.814293 | 1.658340e-51 | -8.615850e-47 |
| Msa0180780 | Msa1335210 | 0.824954 | 6.100274e-54 | -8.615850e-47 |
| Msa0180780 | Msa1342400 | 0.810234 | 1.275519e-50 | -8.615850e-47 |
| Msa0180780 | Msa1348330 | -0.846697 | 1.845868e-59 | -8.615850e-47 |
| Msa0180780 | Msa1349640 | 0.819256 | 1.277484e-52 | -8.615850e-47 |
| Msa0180780 | Msa1349850 | 0.846613 | 1.946054e-59 | -8.615850e-47 |
| Msa0180780 | Msa1364520 | 0.809025 | 2.320237e-50 | -8.615850e-47 |
| Msa0180780 | Msa1364850 | 0.868863 | 4.760391e-66 | -8.615850e-47 |
| Msa0180780 | Msa1365210 | 0.811807 | 5.818629e-51 | -8.615850e-47 |
| Msa0180780 | Msa1368660 | 0.807624 | 4.615232e-50 | -8.615850e-47 |
| Msa0180780 | Msa1369390 | 0.819499 | 1.124571e-52 | -8.615850e-47 |
| Msa0180780 | Msa1373390 | 0.824903 | 6.272048e-54 | -8.615850e-47 |
| Msa0180780 | Msa1384620 | 0.808540 | 2.945876e-50 | -8.615850e-47 |
| Msa0180780 | Msa1388070 | 0.822371 | 2.454626e-53 | -8.615850e-47 |
| Msa0180780 | Msa1403950 | 0.853734 | 1.964824e-61 | -8.615850e-47 |
| Msa0180780 | Msa1404810 | 0.812268 | 4.618454e-51 | -8.615850e-47 |
| Msa0180780 | Msa1414000 | 0.806020 | 1.007428e-49 | -8.615850e-47 |
| Msa0180780 | Msa1420600 | 0.810893 | 9.191017e-51 | -8.615850e-47 |
| Msa0180780 | Msa1427600 | 0.807811 | 4.212941e-50 | -8.615850e-47 |
| Msa0180780 | Msa1430630 | 0.816577 | 5.148828e-52 | -8.615850e-47 |
| Msa0180780 | Msa1435690 | 0.863562 | 2.277873e-64 | -8.615850e-47 |
| Msa0180780 | Msa1451690 | 0.866872 | 2.074303e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0180780 | MtrunA17_Chr1g0204681 | 88.525 | 183 | 13 | 3 | 20 | 199 | 20 | 197 | 1.96e-104 | 298 |
| Msa0180780 | MtrunA17_Chr1g0204521 | 87.978 | 183 | 14 | 3 | 20 | 199 | 21 | 198 | 1.32e-101 | 291 |
| Msa0180780 | MtrunA17_Chr1g0204671 | 89.617 | 183 | 13 | 3 | 20 | 199 | 21 | 200 | 4.41e-101 | 290 |
| Msa0180780 | MtrunA17_Chr1g0204691 | 78.392 | 199 | 26 | 3 | 1 | 199 | 1 | 182 | 1.73e-94 | 273 |
| Msa0180780 | MtrunA17_Chr1g0204721 | 78.689 | 183 | 19 | 4 | 20 | 199 | 21 | 186 | 1.75e-94 | 273 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0180780 | AT3G22840.1 | 53.960 | 202 | 83 | 5 | 1 | 199 | 1 | 195 | 5.09e-61 | 189 |
| Msa0180780 | AT4G14690.1 | 52.475 | 202 | 84 | 5 | 1 | 199 | 1 | 193 | 1.89e-56 | 177 |
Find 85 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGCTGATGGTGGTGTAAT+TGG | 0.245963 | 1_4:-68756577 | None:intergenic |
| GTTGTTTATATAGACTAAAA+TGG | 0.292529 | 1_4:-68756073 | None:intergenic |
| CTACCAACCTTAACAATCTA+AGG | 0.298813 | 1_4:+68756113 | Msa0180780:five_prime_UTR |
| GGTTTGTTTGATCAAATATC+TGG | 0.314167 | 1_4:+68756870 | Msa0180780:CDS |
| GTTGGTTGTGGTTGTGGTGG+TGG | 0.328350 | 1_4:-68756610 | None:intergenic |
| TGTGGTTGTGGTGGTGGTGG+TGG | 0.335539 | 1_4:-68756604 | None:intergenic |
| AGTGGAATTCCATGGTTCTT+GGG | 0.336113 | 1_4:+68756897 | Msa0180780:CDS |
| ATGCATTGTGAGGGATATTA+TGG | 0.340683 | 1_4:-68756049 | None:intergenic |
| ATTGGGTCTACAGGCACCTT+TGG | 0.360861 | 1_4:-68756559 | None:intergenic |
| GGTTGTGGTTGTGGTGGTGG+TGG | 0.364327 | 1_4:-68756607 | None:intergenic |
| GGTGGTGGAGTTGGTGCTGA+TGG | 0.365819 | 1_4:-68756589 | None:intergenic |
| TATGTTGGGTTTGATTGCTT+TGG | 0.370659 | 1_4:+68757037 | Msa0180780:CDS |
| TATTATCAAGAGAATTCAAT+TGG | 0.371788 | 1_4:+68757213 | Msa0180780:three_prime_UTR |
| TCAGTTATCATCCCCATTCA+TGG | 0.387638 | 1_4:+68757364 | Msa0180780:three_prime_UTR |
| CACTACACCTTAGATTGTTA+AGG | 0.389762 | 1_4:-68756120 | None:intergenic |
| AATGGAAGGTTGGCTATGAT+TGG | 0.393839 | 1_4:+68756807 | Msa0180780:CDS |
| TAGTGGAATTCCATGGTTCT+TGG | 0.394017 | 1_4:+68756896 | Msa0180780:CDS |
| CCATTGATTCTCTCAGGTGC+TGG | 0.411549 | 1_4:-68756789 | None:intergenic |
| CAAGCATTTCTTCTCAAGCT+TGG | 0.413181 | 1_4:-68756320 | None:intergenic |
| TTAGATGCAATTGAAATAGA+AGG | 0.427654 | 1_4:+68757293 | Msa0180780:three_prime_UTR |
| AACCTTCCATTGATTCTCTC+AGG | 0.436061 | 1_4:-68756795 | None:intergenic |
| GTGCTGATGGTGGTGTAATT+GGG | 0.440700 | 1_4:-68756576 | None:intergenic |
| ATATGAAAAGTGGAAAGAAA+TGG | 0.440968 | 1_4:+68757321 | Msa0180780:three_prime_UTR |
| TAATTAGAAACTCCATGAAT+GGG | 0.444349 | 1_4:-68757376 | None:intergenic |
| GTTAATGTTTATAGAATTTG+CGG | 0.445036 | 1_4:+68757118 | Msa0180780:three_prime_UTR |
| GTTCAAATTGTATTATCATC+AGG | 0.447050 | 1_4:-68757468 | None:intergenic |
| GTATAGGTTGGTTGTGGTTG+TGG | 0.448474 | 1_4:-68756616 | None:intergenic |
| GAATGGTAGAATTGCTATGT+TGG | 0.450278 | 1_4:+68757022 | Msa0180780:CDS |
| GAAGGTAAACATATGAAAAG+TGG | 0.450859 | 1_4:+68757311 | Msa0180780:three_prime_UTR |
| ATTATCAAGAGAATTCAATT+GGG | 0.452668 | 1_4:+68757214 | Msa0180780:three_prime_UTR |
| CACCTTTGGTGAACGTGTAT+AGG | 0.459386 | 1_4:-68756632 | None:intergenic |
| TTAATTAGAAACTCCATGAA+TGG | 0.465199 | 1_4:-68757377 | None:intergenic |
| GGTGGAGTTGGTGCTGATGG+TGG | 0.468618 | 1_4:-68756586 | None:intergenic |
| CATTAAGAACTTATAATCAA+TGG | 0.480276 | 1_4:+68756208 | Msa0180780:exon |
| GAAATGCTTGCCTCAAAGTT+CGG | 0.480582 | 1_4:+68756333 | Msa0180780:CDS |
| CGGATTTGATGGCATTTGGT+GGG | 0.485102 | 1_4:+68756766 | Msa0180780:CDS |
| TCGGATTTGATGGCATTTGG+TGG | 0.487791 | 1_4:+68756765 | Msa0180780:CDS |
| GGTAGGTATAGCATTGAAGA+TGG | 0.490124 | 1_4:-68756095 | None:intergenic |
| AATGGTAGAATTGCTATGTT+GGG | 0.492247 | 1_4:+68757023 | Msa0180780:CDS |
| ATGGAGTTTCTAATTAACAT+AGG | 0.494734 | 1_4:+68757383 | Msa0180780:three_prime_UTR |
| CTTAGATTGTTAAGGTTGGT+AGG | 0.508312 | 1_4:-68756112 | None:intergenic |
| TCTAGGCCTGCTAGAAATGC+TGG | 0.515845 | 1_4:-68756270 | None:intergenic |
| GGTGGTGTAATTGGGTCTAC+AGG | 0.516474 | 1_4:-68756568 | None:intergenic |
| CCAGCACCTGAGAGAATCAA+TGG | 0.516939 | 1_4:+68756789 | Msa0180780:CDS |
| CAGCCATGGACCGAACTTTG+AGG | 0.520058 | 1_4:-68756343 | None:intergenic |
| TAGGTTGGTTGTGGTTGTGG+TGG | 0.520190 | 1_4:-68756613 | None:intergenic |
| TAATGTGTTGAGCGCTCAAA+TGG | 0.525410 | 1_4:-68757443 | None:intergenic |
| GATCAAATATCTGGTGGTAG+TGG | 0.528357 | 1_4:+68756879 | Msa0180780:CDS |
| CGAAAACATTACCTCAGCCA+TGG | 0.528935 | 1_4:-68756357 | None:intergenic |
| CAAAGTTCGGTCCATGGCTG+AGG | 0.533870 | 1_4:+68756346 | Msa0180780:CDS |
| GGATGGCTTTGTAAAACACT+TGG | 0.536418 | 1_4:-68756156 | None:intergenic |
| AGTGTGGAGTCTAAGTCAAA+AGG | 0.538159 | 1_4:+68756972 | Msa0180780:CDS |
| GAGCGCTCAAATGGTTGCAC+AGG | 0.540127 | 1_4:-68757434 | None:intergenic |
| TTGCCTCAAAGTTCGGTCCA+TGG | 0.544126 | 1_4:+68756340 | Msa0180780:CDS |
| GGTGGAGATAGCAAATGGAC+AGG | 0.547189 | 1_4:+68756848 | Msa0180780:CDS |
| CCATGACCAGCATTTCTAGC+AGG | 0.549312 | 1_4:+68756264 | Msa0180780:CDS |
| CCTGCTAGAAATGCTGGTCA+TGG | 0.550870 | 1_4:-68756264 | None:intergenic |
| GTGGAATTCCATGGTTCTTG+GGG | 0.551268 | 1_4:+68756898 | Msa0180780:CDS |
| GAACGTGTATAGGTTGGTTG+TGG | 0.557227 | 1_4:-68756622 | None:intergenic |
| TGAGAGAATCAATGGAAGGT+TGG | 0.560259 | 1_4:+68756797 | Msa0180780:CDS |
| TAGACTCCACACTAACCCCT+TGG | 0.562091 | 1_4:-68756962 | None:intergenic |
| GAAGGTATGTTGTTAACTCT+AGG | 0.563861 | 1_4:-68756287 | None:intergenic |
| CTATAGAAATCTATTACACA+AGG | 0.595515 | 1_4:-68757088 | None:intergenic |
| TTGTTTGATCAAATATCTGG+TGG | 0.595573 | 1_4:+68756873 | Msa0180780:CDS |
| TTATCAAGAGAATTCAATTG+GGG | 0.596726 | 1_4:+68757215 | Msa0180780:three_prime_UTR |
| AACCTATACACGTTCACCAA+AGG | 0.599727 | 1_4:+68756630 | Msa0180780:CDS |
| TGTCCTCAGATGCTGAGTTG+TGG | 0.599794 | 1_4:+68757000 | Msa0180780:CDS |
| ACACCTTAGATTGTTAAGGT+TGG | 0.602493 | 1_4:-68756116 | None:intergenic |
| ATTCCACAACTCAGCATCTG+AGG | 0.606044 | 1_4:-68757003 | None:intergenic |
| TAAAATGGAATGCATTGTGA+GGG | 0.612817 | 1_4:-68756058 | None:intergenic |
| TTTGGTGAACGTGTATAGGT+TGG | 0.617927 | 1_4:-68756628 | None:intergenic |
| CTAAAATGGAATGCATTGTG+AGG | 0.619896 | 1_4:-68756059 | None:intergenic |
| AAGCTTGGCATATACACAGA+AGG | 0.629885 | 1_4:-68756305 | None:intergenic |
| AGGGCAGAAAGAGCAACCAA+AGG | 0.630670 | 1_4:+68756543 | Msa0180780:CDS |
| ACACTTGTCCCCAAGAACCA+TGG | 0.633615 | 1_4:-68756906 | None:intergenic |
| CTGGTGGTAGTGGAATTCCA+TGG | 0.634822 | 1_4:+68756889 | Msa0180780:CDS |
| TCAGATGCTGAGTTGTGGAA+TGG | 0.641735 | 1_4:+68757005 | Msa0180780:CDS |
| ACTTGTCTTCAATTTCCACA+AGG | 0.644732 | 1_4:-68757246 | None:intergenic |
| GTGGAGATAGCAAATGGACA+GGG | 0.645295 | 1_4:+68756849 | Msa0180780:CDS |
| CACCTGAGAGAATCAATGGA+AGG | 0.646646 | 1_4:+68756793 | Msa0180780:CDS |
| AATTAGAAACTCCATGAATG+GGG | 0.655315 | 1_4:-68757375 | None:intergenic |
| GGATCTTGTTACACACTACG+TGG | 0.674942 | 1_4:+68756024 | None:intergenic |
| ATGAATGGGGATGATAACTG+AGG | 0.690432 | 1_4:-68757362 | None:intergenic |
| AATAGATTTCTATAGTGACA+CGG | 0.707814 | 1_4:+68757096 | Msa0180780:exon |
| TATAGAAATCTATTACACAA+GGG | 0.717921 | 1_4:-68757087 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGTAATAATGATGAAAATA+TGG | + | chr1_4:68756724-68756743 | Msa0180780:intron | 15.0% |
| !! | AAGTAATAATGATGAAAATA+TGG | + | chr1_4:68756724-68756743 | Msa0180780:intron | 15.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | - | chr1_4:68756076-68756095 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | + | chr1_4:68756208-68756227 | Msa0180780:exon | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | + | chr1_4:68756519-68756538 | Msa0180780:intron | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | - | chr1_4:68757090-68757109 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | + | chr1_4:68757118-68757137 | Msa0180780:three_prime_UTR | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | - | chr1_4:68757192-68757211 | None:intergenic | 20.0% |
| !! | TATTATCAAGAGAATTCAAT+TGG | + | chr1_4:68757213-68757232 | Msa0180780:three_prime_UTR | 20.0% |
| !! | ATTATCAAGAGAATTCAATT+GGG | + | chr1_4:68757214-68757233 | Msa0180780:three_prime_UTR | 20.0% |
| !! | GTTGTTTATATAGACTAAAA+TGG | - | chr1_4:68756076-68756095 | None:intergenic | 20.0% |
| !! | CATTAAGAACTTATAATCAA+TGG | + | chr1_4:68756208-68756227 | Msa0180780:exon | 20.0% |
| !!! | AGTTTTTCATTACATTTATC+AGG | + | chr1_4:68756519-68756538 | Msa0180780:intron | 20.0% |
| !! | TATAGAAATCTATTACACAA+GGG | - | chr1_4:68757090-68757109 | None:intergenic | 20.0% |
| !! | GTTAATGTTTATAGAATTTG+CGG | + | chr1_4:68757118-68757137 | Msa0180780:three_prime_UTR | 20.0% |
| !! | GAGAATAATAAAAATCTCAA+AGG | - | chr1_4:68757192-68757211 | None:intergenic | 20.0% |
| !! | TATTATCAAGAGAATTCAAT+TGG | + | chr1_4:68757213-68757232 | Msa0180780:three_prime_UTR | 20.0% |
| !! | ATTATCAAGAGAATTCAATT+GGG | + | chr1_4:68757214-68757233 | Msa0180780:three_prime_UTR | 20.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | + | chr1_4:68756378-68756397 | Msa0180780:intron | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | + | chr1_4:68756523-68756542 | Msa0180780:intron | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | + | chr1_4:68756524-68756543 | Msa0180780:intron | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | + | chr1_4:68757059-68757078 | Msa0180780:CDS | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | - | chr1_4:68757091-68757110 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+CGG | + | chr1_4:68757096-68757115 | Msa0180780:exon | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+GGG | + | chr1_4:68757215-68757234 | Msa0180780:three_prime_UTR | 25.0% |
| ! | TTAGATGCAATTGAAATAGA+AGG | + | chr1_4:68757293-68757312 | Msa0180780:three_prime_UTR | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | + | chr1_4:68757321-68757340 | Msa0180780:three_prime_UTR | 25.0% |
| ! | TAATTAGAAACTCCATGAAT+GGG | - | chr1_4:68757379-68757398 | None:intergenic | 25.0% |
| ! | TTAATTAGAAACTCCATGAA+TGG | - | chr1_4:68757380-68757399 | None:intergenic | 25.0% |
| ! | ATGGAGTTTCTAATTAACAT+AGG | + | chr1_4:68757383-68757402 | Msa0180780:three_prime_UTR | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | - | chr1_4:68757471-68757490 | None:intergenic | 25.0% |
| !! | CGAAAACAGATTTAACTTTA+AGG | + | chr1_4:68756378-68756397 | Msa0180780:intron | 25.0% |
| ! | TTTCATTACATTTATCAGGA+AGG | + | chr1_4:68756523-68756542 | Msa0180780:intron | 25.0% |
| ! | TTCATTACATTTATCAGGAA+GGG | + | chr1_4:68756524-68756543 | Msa0180780:intron | 25.0% |
| !! | GCTTTTACAGAATATGTTAA+GGG | + | chr1_4:68757059-68757078 | Msa0180780:CDS | 25.0% |
| ! | CTATAGAAATCTATTACACA+AGG | - | chr1_4:68757091-68757110 | None:intergenic | 25.0% |
| ! | AATAGATTTCTATAGTGACA+CGG | + | chr1_4:68757096-68757115 | Msa0180780:exon | 25.0% |
| ! | TTATCAAGAGAATTCAATTG+GGG | + | chr1_4:68757215-68757234 | Msa0180780:three_prime_UTR | 25.0% |
| ! | TTAGATGCAATTGAAATAGA+AGG | + | chr1_4:68757293-68757312 | Msa0180780:three_prime_UTR | 25.0% |
| ! | ATATGAAAAGTGGAAAGAAA+TGG | + | chr1_4:68757321-68757340 | Msa0180780:three_prime_UTR | 25.0% |
| ! | TAATTAGAAACTCCATGAAT+GGG | - | chr1_4:68757379-68757398 | None:intergenic | 25.0% |
| ! | TTAATTAGAAACTCCATGAA+TGG | - | chr1_4:68757380-68757399 | None:intergenic | 25.0% |
| ! | ATGGAGTTTCTAATTAACAT+AGG | + | chr1_4:68757383-68757402 | Msa0180780:three_prime_UTR | 25.0% |
| ! | GTTCAAATTGTATTATCATC+AGG | - | chr1_4:68757471-68757490 | None:intergenic | 25.0% |
| TAAAATGGAATGCATTGTGA+GGG | - | chr1_4:68756061-68756080 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | - | chr1_4:68756180-68756199 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | + | chr1_4:68756434-68756453 | Msa0180780:intron | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | + | chr1_4:68756870-68756889 | Msa0180780:CDS | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | + | chr1_4:68756873-68756892 | Msa0180780:CDS | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | + | chr1_4:68756945-68756964 | Msa0180780:CDS | 30.0% |
| !! | CTTTGATTCCATTTTTCCAA+GGG | + | chr1_4:68756946-68756965 | Msa0180780:CDS | 30.0% |
| !! | TTTGATTCCATTTTTCCAAG+GGG | + | chr1_4:68756947-68756966 | Msa0180780:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | + | chr1_4:68757023-68757042 | Msa0180780:CDS | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | + | chr1_4:68757058-68757077 | Msa0180780:CDS | 30.0% |
| GAAGGTAAACATATGAAAAG+TGG | + | chr1_4:68757311-68757330 | Msa0180780:three_prime_UTR | 30.0% | |
| AATTAGAAACTCCATGAATG+GGG | - | chr1_4:68757378-68757397 | None:intergenic | 30.0% | |
| TAAAATGGAATGCATTGTGA+GGG | - | chr1_4:68756061-68756080 | None:intergenic | 30.0% | |
| !!! | ACAAAGTGTTTTTTGAGGAT+AGG | - | chr1_4:68756180-68756199 | None:intergenic | 30.0% |
| TGCATAATGCAACAAGTTAA+TGG | + | chr1_4:68756434-68756453 | Msa0180780:intron | 30.0% | |
| ! | GGTTTGTTTGATCAAATATC+TGG | + | chr1_4:68756870-68756889 | Msa0180780:CDS | 30.0% |
| TTGTTTGATCAAATATCTGG+TGG | + | chr1_4:68756873-68756892 | Msa0180780:CDS | 30.0% | |
| !! | TCTTTGATTCCATTTTTCCA+AGG | + | chr1_4:68756945-68756964 | Msa0180780:CDS | 30.0% |
| !! | CTTTGATTCCATTTTTCCAA+GGG | + | chr1_4:68756946-68756965 | Msa0180780:CDS | 30.0% |
| !! | TTTGATTCCATTTTTCCAAG+GGG | + | chr1_4:68756947-68756966 | Msa0180780:CDS | 30.0% |
| AATGGTAGAATTGCTATGTT+GGG | + | chr1_4:68757023-68757042 | Msa0180780:CDS | 30.0% | |
| ! | GGCTTTTACAGAATATGTTA+AGG | + | chr1_4:68757058-68757077 | Msa0180780:CDS | 30.0% |
| GAAGGTAAACATATGAAAAG+TGG | + | chr1_4:68757311-68757330 | Msa0180780:three_prime_UTR | 30.0% | |
| AATTAGAAACTCCATGAATG+GGG | - | chr1_4:68757378-68757397 | None:intergenic | 30.0% | |
| ATGCATTGTGAGGGATATTA+TGG | - | chr1_4:68756052-68756071 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | - | chr1_4:68756062-68756081 | None:intergenic | 35.0% | |
| ! | CTTAGATTGTTAAGGTTGGT+AGG | - | chr1_4:68756115-68756134 | None:intergenic | 35.0% |
| CTACCAACCTTAACAATCTA+AGG | + | chr1_4:68756113-68756132 | Msa0180780:five_prime_UTR | 35.0% | |
| ACACCTTAGATTGTTAAGGT+TGG | - | chr1_4:68756119-68756138 | None:intergenic | 35.0% | |
| CACTACACCTTAGATTGTTA+AGG | - | chr1_4:68756123-68756142 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | - | chr1_4:68756176-68756195 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | - | chr1_4:68756185-68756204 | None:intergenic | 35.0% |
| ! | GAAGGTATGTTGTTAACTCT+AGG | - | chr1_4:68756290-68756309 | None:intergenic | 35.0% |
| TTTACTACTATGCTCACCTT+TGG | - | chr1_4:68756649-68756668 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | + | chr1_4:68756755-68756774 | Msa0180780:CDS | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | + | chr1_4:68756762-68756781 | Msa0180780:CDS | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | + | chr1_4:68756825-68756844 | Msa0180780:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | + | chr1_4:68757022-68757041 | Msa0180780:CDS | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | + | chr1_4:68757037-68757056 | Msa0180780:CDS | 35.0% | |
| ! | ATTGGGGAAATTTTTCCTTG+TGG | + | chr1_4:68757231-68757250 | Msa0180780:three_prime_UTR | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | - | chr1_4:68757249-68757268 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | + | chr1_4:68757262-68757281 | Msa0180780:three_prime_UTR | 35.0% |
| ATGCATTGTGAGGGATATTA+TGG | - | chr1_4:68756052-68756071 | None:intergenic | 35.0% | |
| CTAAAATGGAATGCATTGTG+AGG | - | chr1_4:68756062-68756081 | None:intergenic | 35.0% | |
| ! | CTTAGATTGTTAAGGTTGGT+AGG | - | chr1_4:68756115-68756134 | None:intergenic | 35.0% |
| CTACCAACCTTAACAATCTA+AGG | + | chr1_4:68756113-68756132 | Msa0180780:five_prime_UTR | 35.0% | |
| ACACCTTAGATTGTTAAGGT+TGG | - | chr1_4:68756119-68756138 | None:intergenic | 35.0% | |
| CACTACACCTTAGATTGTTA+AGG | - | chr1_4:68756123-68756142 | None:intergenic | 35.0% | |
| !!! | AGTGTTTTTTGAGGATAGGA+TGG | - | chr1_4:68756176-68756195 | None:intergenic | 35.0% |
| !!! | CAACGACAAAGTGTTTTTTG+AGG | - | chr1_4:68756185-68756204 | None:intergenic | 35.0% |
| ! | GAAGGTATGTTGTTAACTCT+AGG | - | chr1_4:68756290-68756309 | None:intergenic | 35.0% |
| TTTACTACTATGCTCACCTT+TGG | - | chr1_4:68756649-68756668 | None:intergenic | 35.0% | |
| ! | CACAAAGTTTTCGGATTTGA+TGG | + | chr1_4:68756755-68756774 | Msa0180780:CDS | 35.0% |
| !! | TTTTCGGATTTGATGGCATT+TGG | + | chr1_4:68756762-68756781 | Msa0180780:CDS | 35.0% |
| !!! | ATTGGTTTTGTAGCTGCTAT+GGG | + | chr1_4:68756825-68756844 | Msa0180780:CDS | 35.0% |
| GAATGGTAGAATTGCTATGT+TGG | + | chr1_4:68757022-68757041 | Msa0180780:CDS | 35.0% | |
| TATGTTGGGTTTGATTGCTT+TGG | + | chr1_4:68757037-68757056 | Msa0180780:CDS | 35.0% | |
| ! | ATTGGGGAAATTTTTCCTTG+TGG | + | chr1_4:68757231-68757250 | Msa0180780:three_prime_UTR | 35.0% |
| ACTTGTCTTCAATTTCCACA+AGG | - | chr1_4:68757249-68757268 | None:intergenic | 35.0% | |
| !! | GACAAGTGCAACTTTTAGAA+AGG | + | chr1_4:68757262-68757281 | Msa0180780:three_prime_UTR | 35.0% |
| ! | GGTAGGTATAGCATTGAAGA+TGG | - | chr1_4:68756098-68756117 | None:intergenic | 40.0% |
| !! | GGATGGCTTTGTAAAACACT+TGG | - | chr1_4:68756159-68756178 | None:intergenic | 40.0% |
| AAGCTTGGCATATACACAGA+AGG | - | chr1_4:68756308-68756327 | None:intergenic | 40.0% | |
| CAAGCATTTCTTCTCAAGCT+TGG | - | chr1_4:68756323-68756342 | None:intergenic | 40.0% | |
| GAAATGCTTGCCTCAAAGTT+CGG | + | chr1_4:68756333-68756352 | Msa0180780:CDS | 40.0% | |
| TTTGGTGAACGTGTATAGGT+TGG | - | chr1_4:68756631-68756650 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | + | chr1_4:68756630-68756649 | Msa0180780:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | + | chr1_4:68756746-68756765 | Msa0180780:intron | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | - | chr1_4:68756798-68756817 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | + | chr1_4:68756797-68756816 | Msa0180780:CDS | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | + | chr1_4:68756807-68756826 | Msa0180780:CDS | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | + | chr1_4:68756824-68756843 | Msa0180780:CDS | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | + | chr1_4:68756826-68756845 | Msa0180780:CDS | 40.0% |
| GATCAAATATCTGGTGGTAG+TGG | + | chr1_4:68756879-68756898 | Msa0180780:CDS | 40.0% | |
| TAGTGGAATTCCATGGTTCT+TGG | + | chr1_4:68756896-68756915 | Msa0180780:CDS | 40.0% | |
| AGTGGAATTCCATGGTTCTT+GGG | + | chr1_4:68756897-68756916 | Msa0180780:CDS | 40.0% | |
| ACACTAACCCCTTGGAAAAA+TGG | - | chr1_4:68756957-68756976 | None:intergenic | 40.0% | |
| !! | ATTTTTCCAAGGGGTTAGTG+TGG | + | chr1_4:68756956-68756975 | Msa0180780:CDS | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | + | chr1_4:68756972-68756991 | Msa0180780:CDS | 40.0% | |
| ATGAATGGGGATGATAACTG+AGG | - | chr1_4:68757365-68757384 | None:intergenic | 40.0% | |
| TCAGTTATCATCCCCATTCA+TGG | + | chr1_4:68757364-68757383 | Msa0180780:three_prime_UTR | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | - | chr1_4:68757446-68757465 | None:intergenic | 40.0% | |
| ! | GGTAGGTATAGCATTGAAGA+TGG | - | chr1_4:68756098-68756117 | None:intergenic | 40.0% |
| !! | GGATGGCTTTGTAAAACACT+TGG | - | chr1_4:68756159-68756178 | None:intergenic | 40.0% |
| AAGCTTGGCATATACACAGA+AGG | - | chr1_4:68756308-68756327 | None:intergenic | 40.0% | |
| CAAGCATTTCTTCTCAAGCT+TGG | - | chr1_4:68756323-68756342 | None:intergenic | 40.0% | |
| GAAATGCTTGCCTCAAAGTT+CGG | + | chr1_4:68756333-68756352 | Msa0180780:CDS | 40.0% | |
| TTTGGTGAACGTGTATAGGT+TGG | - | chr1_4:68756631-68756650 | None:intergenic | 40.0% | |
| AACCTATACACGTTCACCAA+AGG | + | chr1_4:68756630-68756649 | Msa0180780:CDS | 40.0% | |
| ! | GCAGATGAGCACAAAGTTTT+CGG | + | chr1_4:68756746-68756765 | Msa0180780:intron | 40.0% |
| !! | AACCTTCCATTGATTCTCTC+AGG | - | chr1_4:68756798-68756817 | None:intergenic | 40.0% |
| TGAGAGAATCAATGGAAGGT+TGG | + | chr1_4:68756797-68756816 | Msa0180780:CDS | 40.0% | |
| ! | AATGGAAGGTTGGCTATGAT+TGG | + | chr1_4:68756807-68756826 | Msa0180780:CDS | 40.0% |
| !!! | GATTGGTTTTGTAGCTGCTA+TGG | + | chr1_4:68756824-68756843 | Msa0180780:CDS | 40.0% |
| !!! | TTGGTTTTGTAGCTGCTATG+GGG | + | chr1_4:68756826-68756845 | Msa0180780:CDS | 40.0% |
| GATCAAATATCTGGTGGTAG+TGG | + | chr1_4:68756879-68756898 | Msa0180780:CDS | 40.0% | |
| TAGTGGAATTCCATGGTTCT+TGG | + | chr1_4:68756896-68756915 | Msa0180780:CDS | 40.0% | |
| AGTGGAATTCCATGGTTCTT+GGG | + | chr1_4:68756897-68756916 | Msa0180780:CDS | 40.0% | |
| ACACTAACCCCTTGGAAAAA+TGG | - | chr1_4:68756957-68756976 | None:intergenic | 40.0% | |
| !! | ATTTTTCCAAGGGGTTAGTG+TGG | + | chr1_4:68756956-68756975 | Msa0180780:CDS | 40.0% |
| AGTGTGGAGTCTAAGTCAAA+AGG | + | chr1_4:68756972-68756991 | Msa0180780:CDS | 40.0% | |
| ATGAATGGGGATGATAACTG+AGG | - | chr1_4:68757365-68757384 | None:intergenic | 40.0% | |
| TCAGTTATCATCCCCATTCA+TGG | + | chr1_4:68757364-68757383 | Msa0180780:three_prime_UTR | 40.0% | |
| TAATGTGTTGAGCGCTCAAA+TGG | - | chr1_4:68757446-68757465 | None:intergenic | 40.0% | |
| CGAAAACATTACCTCAGCCA+TGG | - | chr1_4:68756360-68756379 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | - | chr1_4:68756579-68756598 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | - | chr1_4:68756619-68756638 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | - | chr1_4:68756625-68756644 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | - | chr1_4:68756635-68756654 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | + | chr1_4:68756765-68756784 | Msa0180780:CDS | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | + | chr1_4:68756766-68756785 | Msa0180780:CDS | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | + | chr1_4:68756793-68756812 | Msa0180780:CDS | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | + | chr1_4:68756827-68756846 | Msa0180780:CDS | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | + | chr1_4:68756849-68756868 | Msa0180780:CDS | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | + | chr1_4:68756898-68756917 | Msa0180780:CDS | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | - | chr1_4:68757006-68757025 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | + | chr1_4:68757005-68757024 | Msa0180780:CDS | 45.0% | |
| CGAAAACATTACCTCAGCCA+TGG | - | chr1_4:68756360-68756379 | None:intergenic | 45.0% | |
| !! | GTGCTGATGGTGGTGTAATT+GGG | - | chr1_4:68756579-68756598 | None:intergenic | 45.0% |
| !! | GTATAGGTTGGTTGTGGTTG+TGG | - | chr1_4:68756619-68756638 | None:intergenic | 45.0% |
| !! | GAACGTGTATAGGTTGGTTG+TGG | - | chr1_4:68756625-68756644 | None:intergenic | 45.0% |
| CACCTTTGGTGAACGTGTAT+AGG | - | chr1_4:68756635-68756654 | None:intergenic | 45.0% | |
| ! | TCGGATTTGATGGCATTTGG+TGG | + | chr1_4:68756765-68756784 | Msa0180780:CDS | 45.0% |
| ! | CGGATTTGATGGCATTTGGT+GGG | + | chr1_4:68756766-68756785 | Msa0180780:CDS | 45.0% |
| CACCTGAGAGAATCAATGGA+AGG | + | chr1_4:68756793-68756812 | Msa0180780:CDS | 45.0% | |
| !!! | TGGTTTTGTAGCTGCTATGG+GGG | + | chr1_4:68756827-68756846 | Msa0180780:CDS | 45.0% |
| GTGGAGATAGCAAATGGACA+GGG | + | chr1_4:68756849-68756868 | Msa0180780:CDS | 45.0% | |
| GTGGAATTCCATGGTTCTTG+GGG | + | chr1_4:68756898-68756917 | Msa0180780:CDS | 45.0% | |
| ATTCCACAACTCAGCATCTG+AGG | - | chr1_4:68757006-68757025 | None:intergenic | 45.0% | |
| TCAGATGCTGAGTTGTGGAA+TGG | + | chr1_4:68757005-68757024 | Msa0180780:CDS | 45.0% | |
| CCTGCTAGAAATGCTGGTCA+TGG | - | chr1_4:68756267-68756286 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | + | chr1_4:68756264-68756283 | Msa0180780:CDS | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | - | chr1_4:68756273-68756292 | None:intergenic | 50.0% | |
| TTGCCTCAAAGTTCGGTCCA+TGG | + | chr1_4:68756340-68756359 | Msa0180780:CDS | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | + | chr1_4:68756543-68756562 | Msa0180780:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | - | chr1_4:68756562-68756581 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | - | chr1_4:68756571-68756590 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | - | chr1_4:68756580-68756599 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | - | chr1_4:68756616-68756635 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | - | chr1_4:68756792-68756811 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | + | chr1_4:68756789-68756808 | Msa0180780:CDS | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | + | chr1_4:68756830-68756849 | Msa0180780:CDS | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | + | chr1_4:68756843-68756862 | Msa0180780:CDS | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | + | chr1_4:68756848-68756867 | Msa0180780:CDS | 50.0% | |
| !! | CTGGTGGTAGTGGAATTCCA+TGG | + | chr1_4:68756889-68756908 | Msa0180780:CDS | 50.0% |
| ACACTTGTCCCCAAGAACCA+TGG | - | chr1_4:68756909-68756928 | None:intergenic | 50.0% | |
| TAGACTCCACACTAACCCCT+TGG | - | chr1_4:68756965-68756984 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | + | chr1_4:68757000-68757019 | Msa0180780:CDS | 50.0% | |
| CCTGCTAGAAATGCTGGTCA+TGG | - | chr1_4:68756267-68756286 | None:intergenic | 50.0% | |
| !! | CCATGACCAGCATTTCTAGC+AGG | + | chr1_4:68756264-68756283 | Msa0180780:CDS | 50.0% |
| TCTAGGCCTGCTAGAAATGC+TGG | - | chr1_4:68756273-68756292 | None:intergenic | 50.0% | |
| TTGCCTCAAAGTTCGGTCCA+TGG | + | chr1_4:68756340-68756359 | Msa0180780:CDS | 50.0% | |
| AGGGCAGAAAGAGCAACCAA+AGG | + | chr1_4:68756543-68756562 | Msa0180780:CDS | 50.0% | |
| ATTGGGTCTACAGGCACCTT+TGG | - | chr1_4:68756562-68756581 | None:intergenic | 50.0% | |
| GGTGGTGTAATTGGGTCTAC+AGG | - | chr1_4:68756571-68756590 | None:intergenic | 50.0% | |
| !! | GGTGCTGATGGTGGTGTAAT+TGG | - | chr1_4:68756580-68756599 | None:intergenic | 50.0% |
| !! | TAGGTTGGTTGTGGTTGTGG+TGG | - | chr1_4:68756616-68756635 | None:intergenic | 50.0% |
| !! | CCATTGATTCTCTCAGGTGC+TGG | - | chr1_4:68756792-68756811 | None:intergenic | 50.0% |
| CCAGCACCTGAGAGAATCAA+TGG | + | chr1_4:68756789-68756808 | Msa0180780:CDS | 50.0% | |
| ! | TTTTGTAGCTGCTATGGGGG+TGG | + | chr1_4:68756830-68756849 | Msa0180780:CDS | 50.0% |
| ATGGGGGTGGAGATAGCAAA+TGG | + | chr1_4:68756843-68756862 | Msa0180780:CDS | 50.0% | |
| GGTGGAGATAGCAAATGGAC+AGG | + | chr1_4:68756848-68756867 | Msa0180780:CDS | 50.0% | |
| !! | CTGGTGGTAGTGGAATTCCA+TGG | + | chr1_4:68756889-68756908 | Msa0180780:CDS | 50.0% |
| ACACTTGTCCCCAAGAACCA+TGG | - | chr1_4:68756909-68756928 | None:intergenic | 50.0% | |
| TAGACTCCACACTAACCCCT+TGG | - | chr1_4:68756965-68756984 | None:intergenic | 50.0% | |
| TGTCCTCAGATGCTGAGTTG+TGG | + | chr1_4:68757000-68757019 | Msa0180780:CDS | 50.0% | |
| CAGCCATGGACCGAACTTTG+AGG | - | chr1_4:68756346-68756365 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | + | chr1_4:68756346-68756365 | Msa0180780:CDS | 55.0% | |
| GTTGGTTGTGGTTGTGGTGG+TGG | - | chr1_4:68756613-68756632 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | - | chr1_4:68757437-68757456 | None:intergenic | 55.0% | |
| CAGCCATGGACCGAACTTTG+AGG | - | chr1_4:68756346-68756365 | None:intergenic | 55.0% | |
| CAAAGTTCGGTCCATGGCTG+AGG | + | chr1_4:68756346-68756365 | Msa0180780:CDS | 55.0% | |
| GTTGGTTGTGGTTGTGGTGG+TGG | - | chr1_4:68756613-68756632 | None:intergenic | 55.0% | |
| GAGCGCTCAAATGGTTGCAC+AGG | - | chr1_4:68757437-68757456 | None:intergenic | 55.0% | |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | - | chr1_4:68756589-68756608 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | - | chr1_4:68756592-68756611 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGAGT+TGG | - | chr1_4:68756601-68756620 | None:intergenic | 60.0% |
| !! | TGTGGTTGTGGTGGTGGTGG+TGG | - | chr1_4:68756607-68756626 | None:intergenic | 60.0% |
| !! | GGTTGTGGTTGTGGTGGTGG+TGG | - | chr1_4:68756610-68756629 | None:intergenic | 60.0% |
| !! | GGTGGAGTTGGTGCTGATGG+TGG | - | chr1_4:68756589-68756608 | None:intergenic | 60.0% |
| !! | GGTGGTGGAGTTGGTGCTGA+TGG | - | chr1_4:68756592-68756611 | None:intergenic | 60.0% |
| !! | TGTGGTGGTGGTGGTGGAGT+TGG | - | chr1_4:68756601-68756620 | None:intergenic | 60.0% |
| !! | TGTGGTTGTGGTGGTGGTGG+TGG | - | chr1_4:68756607-68756626 | None:intergenic | 60.0% |
| !! | GGTTGTGGTTGTGGTGGTGG+TGG | - | chr1_4:68756610-68756629 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 68756031 | 68757532 | 68756031 | ID=Msa0180780;Name=Msa0180780 |
| chr1_4 | mRNA | 68756031 | 68757532 | 68756031 | ID=Msa0180780-mRNA-1;Parent=Msa0180780;Name=Msa0180780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=196|1|1|1|1|1|3|435|199 |
| chr1_4 | exon | 68756031 | 68756367 | 68756031 | ID=Msa0180780-mRNA-1:exon:22714;Parent=Msa0180780-mRNA-1 |
| chr1_4 | exon | 68756541 | 68756651 | 68756541 | ID=Msa0180780-mRNA-1:exon:22715;Parent=Msa0180780-mRNA-1 |
| chr1_4 | exon | 68756750 | 68757532 | 68756750 | ID=Msa0180780-mRNA-1:exon:22716;Parent=Msa0180780-mRNA-1 |
| chr1_4 | five_prime_UTR | 68756031 | 68756226 | 68756031 | ID=Msa0180780-mRNA-1:five_prime_utr;Parent=Msa0180780-mRNA-1 |
| chr1_4 | CDS | 68756227 | 68756367 | 68756227 | ID=Msa0180780-mRNA-1:cds;Parent=Msa0180780-mRNA-1 |
| chr1_4 | CDS | 68756541 | 68756651 | 68756541 | ID=Msa0180780-mRNA-1:cds;Parent=Msa0180780-mRNA-1 |
| chr1_4 | CDS | 68756750 | 68757097 | 68756750 | ID=Msa0180780-mRNA-1:cds;Parent=Msa0180780-mRNA-1 |
| chr1_4 | three_prime_UTR | 68757098 | 68757532 | 68757098 | ID=Msa0180780-mRNA-1:three_prime_utr;Parent=Msa0180780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
