AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0421480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421480 MtrunA17_Chr7g0214451 81.416 113 21 0 5 117 76 188 1.66e-51 169
Msa0421480 MtrunA17_Chr1g0213631 78.448 116 25 0 2 117 25 140 7.15e-49 162
Msa0421480 MtrunA17_Chr1g0213611 78.761 113 24 0 5 117 121 233 1.61e-48 162
Msa0421480 MtrunA17_Chr2g0303731 63.393 112 41 0 5 116 69 180 1.96e-42 146
Msa0421480 MtrunA17_Chr8g0376611 61.818 110 42 0 7 116 4 113 3.12e-42 145
Msa0421480 MtrunA17_Chr2g0290181 69.643 112 34 0 5 116 70 181 8.20e-41 142
Msa0421480 MtrunA17_Chr8g0376631 66.372 113 38 0 5 117 69 181 3.27e-38 135
Msa0421480 MtrunA17_Chr2g0303701 62.500 112 42 0 5 116 69 180 5.46e-35 126
Msa0421480 MtrunA17_Chr8g0376601 57.522 113 48 0 5 117 69 181 2.23e-31 116
Msa0421480 MtrunA17_Chr5g0434231 55.435 92 41 0 1 92 1 92 3.24e-30 105
Msa0421480 MtrunA17_Chr2g0290161 68.182 88 28 0 5 92 3 90 2.36e-27 104
Msa0421480 MtrunA17_Chr3g0144261 45.098 102 56 0 7 108 46 147 2.55e-21 88.2
Msa0421480 MtrunA17_Chr1g0155221 46.364 110 58 1 9 118 93 201 1.04e-20 86.3
Msa0421480 MtrunA17_Chr4g0032021 46.154 104 56 0 7 110 145 248 1.33e-20 85.9
Msa0421480 MtrunA17_Chr4g0021771 38.596 114 70 0 2 115 92 205 3.99e-18 79.0
Msa0421480 MtrunA17_Chr6g0457781 42.727 110 61 2 7 115 149 257 1.06e-17 77.8
Msa0421480 MtrunA17_Chr8g0373181 43.269 104 59 0 9 112 91 194 1.31e-17 77.4
Msa0421480 MtrunA17_Chr2g0282031 37.931 116 72 0 2 117 90 205 1.31e-17 77.4
Msa0421480 MtrunA17_Chr7g0250881 44.681 94 52 0 7 100 109 202 3.27e-17 76.3
Msa0421480 MtrunA17_Chr5g0404191 41.346 104 61 0 9 112 94 197 3.59e-17 75.1
Msa0421480 MtrunA17_Chr7g0273281 40.909 110 64 1 9 118 106 214 1.09e-16 74.7
Msa0421480 MtrunA17_Chr4g0039651 41.237 97 57 0 7 103 94 190 1.10e-16 74.7
Msa0421480 MtrunA17_Chr2g0286721 40.196 102 61 0 9 110 93 194 1.82e-16 73.9
Msa0421480 MtrunA17_Chr5g0432581 42.268 97 56 0 15 111 69 165 4.37e-16 73.2
Msa0421480 MtrunA17_Chr7g0273271 37.273 110 68 1 9 118 71 179 5.25e-16 70.9
Msa0421480 MtrunA17_Chr4g0066581 41.176 102 60 0 9 110 96 197 7.48e-16 72.4
Msa0421480 MtrunA17_Chr8g0390521 35.537 121 77 1 2 122 55 174 1.80e-15 71.2
Msa0421480 MtrunA17_Chr4g0034681 33.628 113 75 0 5 117 70 182 2.04e-15 71.2
Msa0421480 MtrunA17_Chr6g0485661 36.134 119 75 1 2 120 95 212 2.36e-15 70.9
Msa0421480 MtrunA17_Chr3g0146061 39.216 102 62 0 7 108 48 149 2.75e-15 70.9
Msa0421480 MtrunA17_Chr5g0417611 33.019 106 71 0 13 118 92 197 3.21e-15 70.5
Msa0421480 MtrunA17_Chr4g0036021 34.653 101 66 0 17 117 79 179 4.98e-15 70.1
Msa0421480 MtrunA17_Chr3g0144361 34.513 113 74 0 5 117 68 180 1.16e-14 68.9
Msa0421480 MtrunA17_Chr8g0373191 41.509 106 42 1 9 114 83 168 2.27e-14 68.2
Msa0421480 MtrunA17_Chr5g0407441 32.692 104 70 0 7 110 48 151 2.81e-14 67.8
Msa0421480 MtrunA17_Chr1g0205681 33.898 118 74 1 1 118 84 197 3.94e-14 67.4
Msa0421480 MtrunA17_Chr3g0128171 33.945 109 69 1 10 118 44 149 6.92e-14 66.6
Msa0421480 MtrunA17_Chr8g0373531 39.175 97 59 0 15 111 69 165 2.88e-13 65.1
Msa0421480 MtrunA17_Chr4g0065324 30.769 117 77 1 3 119 90 202 1.07e-12 63.5
Msa0421480 MtrunA17_Chr3g0128081 32.479 117 75 2 2 118 84 196 1.10e-12 63.2
Msa0421480 MtrunA17_Chr8g0370141 33.654 104 69 0 7 110 48 151 1.34e-12 63.2
Msa0421480 MtrunA17_Chr8g0390261 33.333 90 60 0 30 119 111 200 1.64e-12 62.8
Msa0421480 MtrunA17_Chr5g0445601 31.579 95 65 0 25 119 106 200 1.80e-12 62.8
Msa0421480 MtrunA17_Chr4g0004821 35.294 85 55 0 7 91 80 164 2.06e-12 62.4
Msa0421480 MtrunA17_Chr6g0486681 34.444 90 59 0 30 119 111 200 2.79e-12 62.0
Msa0421480 MtrunA17_Chr6g0486671 34.444 90 59 0 30 119 111 200 2.79e-12 62.0
Msa0421480 MtrunA17_Chr4g0065311 31.579 95 65 0 25 119 100 194 3.02e-12 62.0
Msa0421480 MtrunA17_Chr4g0048051 31.915 94 64 0 25 118 103 196 3.32e-12 62.0
Msa0421480 MtrunA17_Chr6g0486021 36.471 85 54 0 7 91 94 178 3.89e-12 61.6
Msa0421480 MtrunA17_Chr3g0078791 34.615 104 65 1 15 118 41 141 5.18e-12 61.2
Msa0421480 MtrunA17_Chr1g0164851 31.818 110 71 1 2 111 85 190 9.90e-12 60.5
Msa0421480 MtrunA17_Chr7g0257631 30.526 95 66 0 25 119 140 234 9.90e-12 60.5
Msa0421480 MtrunA17_Chr1g0164871 31.818 110 71 1 2 111 85 190 1.24e-11 60.5
Msa0421480 MtrunA17_Chr4g0048411 32.979 94 63 0 25 118 103 196 2.06e-11 59.7
Msa0421480 MtrunA17_Chr7g0259471 37.255 102 64 0 9 110 84 185 2.90e-11 59.3
Msa0421480 MtrunA17_Chr1g0205671 34.545 110 68 1 2 111 84 189 3.52e-11 58.9
Msa0421480 MtrunA17_Chr5g0419321 31.731 104 71 0 7 110 76 179 4.54e-11 58.9
Msa0421480 MtrunA17_Chr5g0437021 36.145 83 53 0 29 111 108 190 6.43e-11 58.2
Msa0421480 MtrunA17_Chr5g0446681 35.955 89 54 1 17 105 61 146 6.62e-11 57.8
Msa0421480 MtrunA17_Chr3g0085971 36.585 82 52 0 30 111 107 188 9.21e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0421480 AT2G43330.1 84.956 113 17 0 5 117 74 186 2.74e-46 156
Msa0421480 AT2G35740.1 65.179 112 39 0 5 116 69 180 2.76e-42 146
Msa0421480 AT1G30220.1 64.602 113 40 0 5 117 71 183 2.19e-37 133
Msa0421480 AT4G16480.2 64.865 111 39 0 6 116 71 181 4.09e-36 130
Msa0421480 AT4G16480.3 64.865 111 39 0 6 116 71 181 4.09e-36 130
Msa0421480 AT4G16480.1 64.865 111 39 0 6 116 71 181 4.09e-36 130
Msa0421480 AT4G35300.4 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.8 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.6 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.11 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.1 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.10 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.7 42.157 102 59 0 7 108 48 149 1.94e-19 83.2
Msa0421480 AT4G35300.9 42.157 102 59 0 7 108 48 149 2.13e-19 82.8
Msa0421480 AT4G35300.2 42.157 102 59 0 7 108 48 149 2.13e-19 82.8
Msa0421480 AT4G35300.3 42.157 102 59 0 7 108 48 149 2.13e-19 82.8
Msa0421480 AT5G59250.1 42.308 104 60 0 7 110 147 250 3.74e-19 82.4
Msa0421480 AT3G51490.1 42.157 102 59 0 7 108 48 149 4.45e-19 82.0
Msa0421480 AT3G51490.2 42.157 102 59 0 7 108 48 149 4.64e-19 82.0
Msa0421480 AT3G51490.3 41.414 99 58 0 10 108 1 99 4.63e-18 79.3
Msa0421480 AT1G20840.2 39.216 102 62 0 7 108 46 147 8.50e-18 78.6
Msa0421480 AT1G20840.1 39.216 102 62 0 7 108 46 147 8.50e-18 78.6
Msa0421480 AT5G16150.2 46.316 95 49 2 7 100 149 242 1.19e-17 77.8
Msa0421480 AT5G16150.1 46.316 95 49 2 7 100 149 242 1.19e-17 77.8
Msa0421480 AT5G16150.3 46.316 95 49 2 7 100 149 242 1.19e-17 77.8
Msa0421480 AT2G20780.2 43.564 101 57 0 15 115 47 147 2.69e-17 77.0
Msa0421480 AT2G20780.1 43.564 101 57 0 15 115 105 205 3.69e-17 76.6
Msa0421480 AT1G75220.1 43.269 104 59 0 9 112 92 195 3.78e-17 76.6
Msa0421480 AT1G19450.1 43.269 104 59 0 9 112 93 196 7.77e-17 75.5
Msa0421480 AT1G08930.1 41.176 102 60 0 9 110 102 203 6.44e-16 72.8
Msa0421480 AT1G08930.2 41.176 102 60 0 9 110 102 203 6.44e-16 72.8
Msa0421480 AT5G17010.1 42.268 97 56 0 7 103 96 192 8.31e-16 72.8
Msa0421480 AT5G17010.3 42.268 97 56 0 7 103 96 192 8.31e-16 72.8
Msa0421480 AT5G17010.4 42.268 97 56 0 7 103 96 192 8.31e-16 72.8
Msa0421480 AT5G17010.2 42.268 97 56 0 7 103 97 193 8.90e-16 72.4
Msa0421480 AT3G18830.1 38.835 103 63 0 15 117 86 188 1.71e-15 71.6
Msa0421480 AT2G18480.1 39.806 103 62 0 15 117 72 174 7.18e-15 70.1
Msa0421480 AT3G03090.1 38.614 101 58 1 7 103 96 196 1.44e-14 68.9
Msa0421480 AT4G36670.1 38.835 103 63 0 15 117 67 169 2.08e-14 68.6
Msa0421480 AT5G18840.1 36.434 129 70 2 9 125 88 216 5.09e-14 67.4
Msa0421480 AT1G08920.1 39.216 102 62 0 9 110 76 177 1.36e-13 66.2
Msa0421480 AT1G08920.2 39.216 102 62 0 9 110 76 177 1.42e-13 66.2
Msa0421480 AT1G08920.3 39.216 102 62 0 9 110 76 177 1.73e-13 65.9
Msa0421480 AT5G27360.3 37.624 101 63 0 9 109 127 227 2.64e-13 65.5
Msa0421480 AT5G27360.4 37.624 101 63 0 9 109 79 179 3.02e-13 65.5
Msa0421480 AT3G05150.1 36.667 120 69 1 13 125 83 202 3.60e-13 65.1
Msa0421480 AT3G05150.3 36.667 120 69 1 13 125 83 202 3.60e-13 65.1
Msa0421480 AT3G05150.2 36.667 120 69 1 13 125 83 202 3.69e-13 65.1
Msa0421480 AT5G27360.1 37.624 101 63 0 9 109 79 179 3.71e-13 65.1
Msa0421480 AT1G77210.2 33.333 96 64 0 24 119 105 200 4.17e-13 65.1
Msa0421480 AT1G77210.1 33.333 96 64 0 24 119 105 200 4.17e-13 65.1
Msa0421480 AT3G05165.6 36.082 97 62 0 13 109 78 174 4.47e-13 64.7
Msa0421480 AT3G05400.1 38.947 95 58 0 9 103 70 164 6.35e-13 64.3
Msa0421480 AT3G05165.4 36.082 97 62 0 13 109 78 174 7.58e-13 64.3
Msa0421480 AT3G05165.5 36.082 97 62 0 13 109 78 174 7.58e-13 64.3
Msa0421480 AT3G05165.3 36.082 97 62 0 13 109 78 174 8.27e-13 63.9
Msa0421480 AT3G05165.2 36.082 97 62 0 13 109 78 174 8.27e-13 63.9
Msa0421480 AT3G05165.1 36.082 97 62 0 13 109 78 174 8.27e-13 63.9
Msa0421480 AT1G50310.1 36.559 93 59 0 25 117 105 197 1.46e-12 63.5
Msa0421480 AT1G54730.10 38.235 102 63 0 9 110 76 177 1.90e-12 62.8
Msa0421480 AT1G54730.6 38.235 102 63 0 9 110 76 177 1.90e-12 62.8
Msa0421480 AT1G54730.8 38.235 102 63 0 9 110 76 177 2.35e-12 62.8
Msa0421480 AT1G54730.2 38.235 102 63 0 9 110 76 177 2.36e-12 62.8
Msa0421480 AT1G54730.9 38.235 102 63 0 9 110 76 177 2.59e-12 62.8
Msa0421480 AT1G54730.7 38.235 102 63 0 9 110 76 177 2.59e-12 62.8
Msa0421480 AT1G54730.5 38.235 102 63 0 9 110 76 177 2.60e-12 62.8
Msa0421480 AT1G54730.3 38.235 102 63 0 9 110 76 177 2.81e-12 62.4
Msa0421480 AT1G54730.11 38.235 102 63 0 9 110 76 177 2.82e-12 62.4
Msa0421480 AT1G54730.4 38.235 102 63 0 9 110 76 177 2.94e-12 62.4
Msa0421480 AT1G05030.2 38.372 86 53 0 7 92 71 156 2.95e-12 62.4
Msa0421480 AT3G20460.1 33.673 98 65 0 13 110 101 198 3.97e-12 62.0
Msa0421480 AT1G05030.1 38.372 86 53 0 7 92 123 208 4.06e-12 62.0
Msa0421480 AT2G16120.1 33.981 103 68 0 15 117 76 178 9.57e-12 61.2
Msa0421480 AT3G05155.1 38.947 95 58 0 9 103 71 165 1.55e-11 60.5
Msa0421480 AT3G05155.2 38.947 95 58 0 9 103 71 165 1.56e-11 60.1
Msa0421480 AT3G19940.1 37.931 87 54 0 25 111 105 191 2.75e-11 59.7
Msa0421480 AT5G26250.1 29.412 119 80 1 1 119 81 195 3.30e-11 59.7
Msa0421480 AT2G48020.3 36.275 102 65 0 9 110 72 173 3.43e-11 59.3
Msa0421480 AT2G48020.4 36.275 102 65 0 9 110 72 173 3.45e-11 59.3
Msa0421480 AT1G08890.1 37.895 95 59 0 9 103 71 165 3.55e-11 59.3
Msa0421480 AT3G05160.1 34.021 97 64 0 13 109 69 165 3.58e-11 59.3
Msa0421480 AT4G21480.1 30.476 105 73 0 13 117 91 195 3.60e-11 59.3
Msa0421480 AT2G48020.2 36.275 102 65 0 9 110 72 173 3.62e-11 59.3
Msa0421480 AT2G48020.1 36.275 102 65 0 9 110 72 173 3.62e-11 59.3
Msa0421480 AT3G05160.3 34.021 97 64 0 13 109 20 116 3.66e-11 59.3
Msa0421480 AT3G05160.2 34.021 97 64 0 13 109 20 116 3.66e-11 59.3
Msa0421480 AT1G11260.1 29.808 104 73 0 15 118 93 196 3.84e-11 59.3
Msa0421480 AT5G27350.1 34.653 101 66 0 9 109 75 175 4.77e-11 58.9
Msa0421480 AT4G04760.3 38.554 83 51 0 9 91 16 98 5.12e-11 58.9
Msa0421480 AT4G04760.1 38.554 83 51 0 9 91 75 157 6.14e-11 58.9
Msa0421480 AT1G08900.3 37.363 91 57 0 9 99 61 151 6.26e-11 58.5
Msa0421480 AT1G08900.5 37.363 91 57 0 9 99 27 117 6.72e-11 58.5
Msa0421480 AT4G04760.2 38.554 83 51 0 9 91 75 157 6.89e-11 58.5
Msa0421480 AT1G08900.4 37.363 91 57 0 9 99 69 159 7.32e-11 58.5
Msa0421480 AT1G08900.1 37.363 91 57 0 9 99 69 159 7.93e-11 58.5
Msa0421480 AT1G08900.2 37.363 91 57 0 9 99 69 159 7.93e-11 58.5
Msa0421480 AT2G16130.1 33.981 103 68 0 15 117 76 178 8.22e-11 58.5

Find 211 sgRNAs with CRISPR-Local

Find 317 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCCTAATTTAGTGATTTA+TGG 0.074783 3_2:+70435989 Msa0421480:three_prime_UTR
TTCTTAATGAACTTGTTTAA+TGG 0.149554 3_2:+70436344 Msa0421480:three_prime_UTR
GAATCACCATGTACTCAAAT+TGG 0.177630 3_2:+70436732 Msa0421480:three_prime_UTR
TATGGGTGGTTAGCAATTAT+TGG 0.221949 3_2:+70438029 Msa0421480:three_prime_UTR
TATCGTTACAAAGACATTAT+TGG 0.223834 3_2:+70438531 Msa0421480:three_prime_UTR
CATATAGTTTAAGTCATTAA+AGG 0.241745 3_2:+70436673 Msa0421480:three_prime_UTR
TTTAATCTGGTTGGGAATAT+AGG 0.242155 3_2:+70436574 Msa0421480:three_prime_UTR
TGTCATAAGTGATAAACTTT+TGG 0.244195 3_2:+70435768 Msa0421480:three_prime_UTR
AGTTGTTAGCTGCCACATTA+TGG 0.246628 3_2:+70438473 Msa0421480:three_prime_UTR
CTGTCTCTCTTACATATAAA+AGG 0.248859 3_2:+70436043 Msa0421480:three_prime_UTR
GCATTGGTTGGTGCAATTAT+TGG 0.255758 3_2:+70435119 Msa0421480:CDS
ATTCCCATCAAGATATATAT+TGG 0.255970 3_2:+70435932 Msa0421480:three_prime_UTR
TACCTCTTTAAACTTCTAAA+TGG 0.263710 3_2:-70435587 None:intergenic
TAACCATAAATCACTAAATT+AGG 0.277820 3_2:-70435992 None:intergenic
AATCCTCACCATCAGAAATA+AGG 0.280399 3_2:+70435333 Msa0421480:CDS
TTGTATTGCTGTTACCTGTT+AGG 0.291991 3_2:+70436867 Msa0421480:three_prime_UTR
GGTGGTAGTTTCGTGATTCT+TGG 0.293372 3_2:+70438233 Msa0421480:three_prime_UTR
CTTTAATGACTTAAACTATA+TGG 0.295951 3_2:-70436672 None:intergenic
TTAATGAAAACAGGTAATAT+TGG 0.297116 3_2:-70436126 None:intergenic
CTGCTTTATTAAAATTCATT+AGG 0.300387 3_2:-70436917 None:intergenic
CAGATTCGCAAAGGATGGTT+TGG 0.300888 3_2:-70436180 None:intergenic
TTAGCCTTTCACTATGATAA+TGG 0.307196 3_2:-70436809 None:intergenic
TACTCTTGGATCAGTTGTTA+TGG 0.307618 3_2:+70435214 Msa0421480:CDS
ATAGTATGTAGGAATGTATC+TGG 0.312784 3_2:+70435545 Msa0421480:three_prime_UTR
CATGGCACCGGTCCCATTCC+TGG 0.314241 3_2:-70438080 None:intergenic
CTAAATTTGATACTTTAATC+TGG 0.315213 3_2:+70436561 Msa0421480:three_prime_UTR
GGTAATTGACTTCATCTTCT+AGG 0.316687 3_2:-70437217 None:intergenic
CTTCTATCTCTCATCGTTGC+TGG 0.319739 3_2:+70437852 Msa0421480:three_prime_UTR
TTATGCAATTTAAGCTCATT+TGG 0.320123 3_2:-70436417 None:intergenic
TTTGTGAGCTGCAGTATTAT+TGG 0.321156 3_2:+70438418 Msa0421480:three_prime_UTR
ATTGCTTATTTCATATTTGC+TGG 0.322622 3_2:+70435871 Msa0421480:three_prime_UTR
TAATGAAAACAGGTAATATT+GGG 0.326011 3_2:-70436125 None:intergenic
AACGCTGCTGGAACAATTCT+TGG 0.326350 3_2:+70437879 Msa0421480:three_prime_UTR
GCGTTCATAGTTATAGATAT+TGG 0.330173 3_2:-70437195 None:intergenic
TTCCCATCAAGATATATATT+GGG 0.332169 3_2:+70435933 Msa0421480:three_prime_UTR
GGCTGGATTAATGATGCTTT+TGG 0.333762 3_2:+70435155 Msa0421480:CDS
GGAATGTGTTCTTGGCAAAT+AGG 0.334285 3_2:+70438795 Msa0421480:three_prime_UTR
TAAGAGATGGAATGTGTTCT+TGG 0.339227 3_2:+70438787 Msa0421480:three_prime_UTR
AAGTGATAGCATATATTGTT+AGG 0.342922 3_2:+70435734 Msa0421480:three_prime_UTR
GCTGATGTTGTCTTTACTCT+TGG 0.351449 3_2:+70435200 Msa0421480:CDS
ATTTCTGATTCCGTTGGCCT+TGG 0.355335 3_2:+70438212 Msa0421480:three_prime_UTR
ACATTTACGAGGAGATTTAA+AGG 0.359397 3_2:-70435460 None:intergenic
ATGGGTGGTTAGCAATTATT+GGG 0.363703 3_2:+70438030 Msa0421480:three_prime_UTR
AATGTCAATCCTTTCGTCTC+TGG 0.364858 3_2:-70438299 None:intergenic
TAGGAAAGATGAAGCTATTT+CGG 0.365028 3_2:+70437166 Msa0421480:three_prime_UTR
TTGGCCCTCTCAAGCTTGTC+AGG 0.369336 3_2:+70437936 Msa0421480:three_prime_UTR
ATCCTCACCATCAGAAATAA+GGG 0.369499 3_2:+70435334 Msa0421480:CDS
TGTTTGCTACTTCCGAAGTT+AGG 0.369759 3_2:+70438739 Msa0421480:three_prime_UTR
TTTGATACTTTAATCTGGTT+GGG 0.375716 3_2:+70436566 Msa0421480:three_prime_UTR
ATCAAGCATTCTGTTTCAAC+AGG 0.377714 3_2:-70435800 None:intergenic
ATAAGAATTAAGCGAAATAA+TGG 0.383788 3_2:+70438641 Msa0421480:three_prime_UTR
AGATGGATGCTGGGAGTTGC+TGG 0.385326 3_2:+70436955 Msa0421480:three_prime_UTR
TATGCAATTTAAGCTCATTT+GGG 0.389233 3_2:-70436416 None:intergenic
GCATGTCAGCTACTGTAAAC+TGG 0.392246 3_2:+70438153 Msa0421480:three_prime_UTR
GACTCCACAAATACAACCTA+TGG 0.396278 3_2:+70438011 Msa0421480:three_prime_UTR
CTTTCAATTTCTGATTCCGT+TGG 0.399504 3_2:+70438206 Msa0421480:three_prime_UTR
ATTTGATACTTTAATCTGGT+TGG 0.403195 3_2:+70436565 Msa0421480:three_prime_UTR
GGGATCTCTTCTTCCATATG+AGG 0.405698 3_2:-70438334 None:intergenic
CCCACAATCATTCAAATGGC+TGG 0.417824 3_2:+70437804 Msa0421480:three_prime_UTR
TGGGACATGGAGATGGATGC+TGG 0.419380 3_2:+70436945 Msa0421480:three_prime_UTR
ACAAATGAAACATTTAGAAC+TGG 0.419687 3_2:-70438400 None:intergenic
AGATTCGCAAAGGATGGTTT+GGG 0.420208 3_2:-70436179 None:intergenic
CATACACCTCGGAACTCTTC+AGG 0.420694 3_2:-70438125 None:intergenic
CTTACTAAATTAACTACTCT+TGG 0.421275 3_2:-70438768 None:intergenic
GGCCGTCTTCTAGTTGGCAT+TGG 0.421699 3_2:+70435269 Msa0421480:CDS
CTCTATTTCGACTTTCCAAT+AGG 0.423581 3_2:+70435615 Msa0421480:three_prime_UTR
GCAGAGAAAACTACAGGAAA+TGG 0.427348 3_2:-70436211 None:intergenic
GTTGTTAGCTGCCACATTAT+GGG 0.428047 3_2:+70438474 Msa0421480:three_prime_UTR
TAAAGGAAGCAAAGAAAGAT+AGG 0.428138 3_2:-70435443 None:intergenic
TGCCCCAATATATATCTTGA+TGG 0.428959 3_2:-70435936 None:intergenic
AAACATCTCTTCAATTGAAA+AGG 0.430989 3_2:-70438721 None:intergenic
TTGAAGAAGTGGCCCTCATA+TGG 0.431500 3_2:+70438321 Msa0421480:three_prime_UTR
CATGCTGTGTTAATGAAAAC+AGG 0.431746 3_2:-70436135 None:intergenic
AGAAGACAAAGAAATGTAAA+GGG 0.439859 3_2:-70436255 None:intergenic
GCGCTGGCAATCCTTTCTGC+AGG 0.440540 3_2:+70437969 Msa0421480:three_prime_UTR
ACAAATGTGCTTATGATAAC+TGG 0.441016 3_2:+70435371 Msa0421480:CDS
CCACCCATAGGTTGTATTTG+TGG 0.446371 3_2:-70438015 None:intergenic
TCTGATTCCGTTGGCCTTGG+TGG 0.448962 3_2:+70438215 Msa0421480:three_prime_UTR
GTTTACCCAATTTGAGTACA+TGG 0.449821 3_2:-70436738 None:intergenic
GTAGTTAATTTAGTAAGAGA+TGG 0.450293 3_2:+70438774 Msa0421480:three_prime_UTR
ATACTTGGCCGTCTTCTAGT+TGG 0.451275 3_2:+70435263 Msa0421480:CDS
GCAATTATTGGAGCAGCAAC+AGG 0.451312 3_2:+70435131 Msa0421480:CDS
AATCACCATGTACTCAAATT+GGG 0.453387 3_2:+70436733 Msa0421480:three_prime_UTR
CCCAGCCATTTGAATGATTG+TGG 0.454065 3_2:-70437805 None:intergenic
GAGGATTCTGCAATATATAC+AGG 0.455999 3_2:-70435317 None:intergenic
CACCATTTAGAAGTTTAAAG+AGG 0.456962 3_2:+70435585 Msa0421480:three_prime_UTR
TTGGAGCAGCAACAGGTGGC+TGG 0.458266 3_2:+70435138 Msa0421480:CDS
CAGTTCTGATTTCCGTTGAT+CGG 0.461506 3_2:-70437301 None:intergenic
TTAACCATGTATCCCGACTT+TGG 0.462032 3_2:+70438691 Msa0421480:three_prime_UTR
AAGAAGACAAAGAAATGTAA+AGG 0.465109 3_2:-70436256 None:intergenic
CCATGCAGGGCGAAGGAAGT+TGG 0.466366 3_2:+70437917 Msa0421480:three_prime_UTR
CTTCTAGTTGGCATTGGTGT+GGG 0.473241 3_2:+70435275 Msa0421480:CDS
AACTATTGTAAGCATGGCAT+TGG 0.474373 3_2:+70435103 Msa0421480:CDS
GTTGCTGGCATGAACGCTGC+TGG 0.476142 3_2:+70437867 Msa0421480:three_prime_UTR
TAGAAGAAGAGCTAACTGAT+TGG 0.476853 3_2:-70437835 None:intergenic
ATTTATCTAATTGACCATGC+AGG 0.482142 3_2:+70437903 Msa0421480:three_prime_UTR
TTGTGGAGTCAGATGATTGA+AGG 0.486137 3_2:-70437998 None:intergenic
GTGGCAGCTAACAACTCAAA+TGG 0.489208 3_2:-70438466 None:intergenic
GATGCATATGTTCTCATACT+TGG 0.489491 3_2:+70435248 Msa0421480:CDS
GAAGAGTTCCGAGGTGTATG+TGG 0.491124 3_2:+70438128 Msa0421480:three_prime_UTR
AGTATTATTGGACGCGAGCT+AGG 0.499495 3_2:+70438430 Msa0421480:three_prime_UTR
ACTTTCCAATAGGTCAGAAA+AGG 0.500603 3_2:+70435625 Msa0421480:three_prime_UTR
CCAGCCATTTGAATGATTGT+GGG 0.501345 3_2:-70437804 None:intergenic
GTCAGGTGCAACTGTAGCGC+TGG 0.505055 3_2:+70437953 Msa0421480:three_prime_UTR
CAGCCCCACAATCATTCAAA+TGG 0.506355 3_2:+70437800 Msa0421480:three_prime_UTR
AAAAGCCACCTTGGAGACTC+AGG 0.507127 3_2:-70437018 None:intergenic
GCGAAATAATGGTTCGTGGT+TGG 0.508139 3_2:+70438652 Msa0421480:three_prime_UTR
TGTCTCAATAACCTGAAGTC+CGG 0.508881 3_2:-70437339 None:intergenic
CTACTCTCTAAAGTAGAGGT+TGG 0.514834 3_2:-70436602 None:intergenic
AACGAACCCCTTATTTCTGA+TGG 0.515934 3_2:-70435341 None:intergenic
GTAAATGTGCTTATGATACT+TGG 0.516041 3_2:+70435475 Msa0421480:three_prime_UTR
CCACAATCATTCAAATGGCT+GGG 0.517577 3_2:+70437805 Msa0421480:three_prime_UTR
AAATCATGGAAAGAAATGTC+AGG 0.518031 3_2:+70436295 Msa0421480:three_prime_UTR
AGTATGAGAACATATGCATC+TGG 0.518488 3_2:-70435245 None:intergenic
AAAAGGTTATCAACCAAAGT+CGG 0.519224 3_2:-70438704 None:intergenic
TCTTCTAGTTGGCATTGGTG+TGG 0.520316 3_2:+70435274 Msa0421480:CDS
TATAAGTGGCATGTTGTTTG+TGG 0.520344 3_2:+70436498 Msa0421480:three_prime_UTR
CAGGAATGGGACCGGTGCCA+TGG 0.520356 3_2:+70438081 Msa0421480:three_prime_UTR
AGTAACTAATAAGCTATAAG+TGG 0.521664 3_2:+70436484 Msa0421480:three_prime_UTR
AGGATTGACATTTGAAGAAG+TGG 0.524140 3_2:+70438310 Msa0421480:three_prime_UTR
CCAACTTCCTTCGCCCTGCA+TGG 0.525071 3_2:-70437917 None:intergenic
TTTCGCTCCAGGAATGGGAC+CGG 0.526032 3_2:+70438073 Msa0421480:three_prime_UTR
GGTGCCATGGACTGTGAACT+CGG 0.526228 3_2:+70438094 Msa0421480:three_prime_UTR
AAAGGTTATCAACCAAAGTC+GGG 0.528916 3_2:-70438703 None:intergenic
TGGTATGTATGATTGATATG+TGG 0.529093 3_2:+70438551 Msa0421480:three_prime_UTR
ATAGCTTATTAGTTACTGAC+TGG 0.529580 3_2:-70436478 None:intergenic
GATAGGCCTAACCTCGGTAA+AGG 0.531257 3_2:-70435426 None:intergenic
TAAAGCAGGTTCCTGGGACA+TGG 0.532937 3_2:+70436932 Msa0421480:three_prime_UTR
GGTATGTATGATTGATATGT+GGG 0.533355 3_2:+70438552 Msa0421480:three_prime_UTR
TCAACCAAAGTCGGGATACA+TGG 0.534540 3_2:-70438695 None:intergenic
GCTGCCACATTATGGGATGA+TGG 0.538182 3_2:+70438481 Msa0421480:three_prime_UTR
ACCTTCAGGAAAAGCCACCT+TGG 0.540795 3_2:-70437027 None:intergenic
TCAATTGCAGAGAAAACTAC+AGG 0.541638 3_2:-70436217 None:intergenic
TAGAAGCTTTAGACTAGAGA+GGG 0.542612 3_2:-70436091 None:intergenic
ACCCCTTATTTCTGATGGTG+AGG 0.546053 3_2:-70435336 None:intergenic
GACCTAGTTTAATAGTATGT+AGG 0.546542 3_2:+70435534 Msa0421480:three_prime_UTR
TGAGTAGATAAAAGTTTCTG+TGG 0.547274 3_2:+70435507 Msa0421480:three_prime_UTR
GGATCTCTTCTTCCATATGA+GGG 0.549442 3_2:-70438333 None:intergenic
TTTATGATTGTTGTTGTGTG+AGG 0.549821 3_2:+70435707 Msa0421480:three_prime_UTR
AGCATCCATCTCCATGTCCC+AGG 0.551573 3_2:-70436943 None:intergenic
ATTTCCGAGTTCACAGTCCA+TGG 0.551756 3_2:-70438098 None:intergenic
TAAATCAGATTCGCAAAGGA+TGG 0.552209 3_2:-70436185 None:intergenic
GCCACCTTGGAGACTCAGGC+AGG 0.552412 3_2:-70437014 None:intergenic
GTGAGTCATAATCTTTACCC+TGG 0.552440 3_2:-70438355 None:intergenic
AAGAGTTCCGAGGTGTATGT+GGG 0.553039 3_2:+70438129 Msa0421480:three_prime_UTR
GGATACATGGTTAATCGAGC+TGG 0.553877 3_2:-70438682 None:intergenic
GCAGGAAACTATTGTAAGCA+TGG 0.557552 3_2:+70435097 Msa0421480:intron
GCCCCAATATATATCTTGAT+GGG 0.562772 3_2:-70435935 None:intergenic
TGATAGCATATATTGTTAGG+AGG 0.567509 3_2:+70435737 Msa0421480:three_prime_UTR
GACTAGAGAGGGGACTGCAC+TGG 0.568609 3_2:-70436080 None:intergenic
TTGCACCTGACAAGCTTGAG+AGG 0.570360 3_2:-70437941 None:intergenic
TTTATCTAATTGACCATGCA+GGG 0.571092 3_2:+70437904 Msa0421480:three_prime_UTR
GGGACATGGAGATGGATGCT+GGG 0.571277 3_2:+70436946 Msa0421480:three_prime_UTR
AGGTTCCTGGGACATGGAGA+TGG 0.572155 3_2:+70436938 Msa0421480:three_prime_UTR
TTAAGCGAAATAATGGTTCG+TGG 0.574008 3_2:+70438648 Msa0421480:three_prime_UTR
ACGAAAGAACATTAGATACA+TGG 0.577039 3_2:+70437271 Msa0421480:three_prime_UTR
ACACAAAACTGAATAACAGC+TGG 0.577345 3_2:-70436982 None:intergenic
ATAAGTGGCATGTTGTTTGT+GGG 0.577891 3_2:+70436499 Msa0421480:three_prime_UTR
ATTGTAAGCATGGCATTGGT+TGG 0.582517 3_2:+70435107 Msa0421480:CDS
ACTGGCTTCCTCTCTCAAGA+AGG 0.585353 3_2:-70438382 None:intergenic
CGCTGGCAATCCTTTCTGCA+GGG 0.585990 3_2:+70437970 Msa0421480:three_prime_UTR
TTGTTTGTGCCAGAGACGAA+AGG 0.586090 3_2:+70438290 Msa0421480:three_prime_UTR
GATTCTTGGTGTTATATGTG+TGG 0.591951 3_2:+70438247 Msa0421480:three_prime_UTR
TAATTGACCATGCAGGGCGA+AGG 0.593131 3_2:+70437910 Msa0421480:three_prime_UTR
GAGTTCACAGTCCATGGCAC+CGG 0.593789 3_2:-70438092 None:intergenic
ATAGAAGCTTTAGACTAGAG+AGG 0.594943 3_2:-70436092 None:intergenic
TGAGTCATAATCTTTACCCT+GGG 0.594989 3_2:-70438354 None:intergenic
GTAACCATTATCATAGTGAA+AGG 0.597231 3_2:+70436805 Msa0421480:three_prime_UTR
CATATGGAAGAAGAGATCCC+AGG 0.601011 3_2:+70438337 Msa0421480:three_prime_UTR
ATCTTGCCTTTACCGAGGTT+AGG 0.602337 3_2:+70435420 Msa0421480:CDS
TATATATCTAAAGAATTGCG+AGG 0.603383 3_2:+70436765 Msa0421480:three_prime_UTR
TTCCTACATACTATTAAACT+AGG 0.605824 3_2:-70435536 None:intergenic
ACTCCACAAATACAACCTAT+GGG 0.605854 3_2:+70438012 Msa0421480:three_prime_UTR
GAAGGTAAGACCCTGCAGAA+AGG 0.609504 3_2:-70437980 None:intergenic
TCTTGGCAGATTCCTAACTT+CGG 0.609872 3_2:-70438751 None:intergenic
TATTGGGGCAGCATCGCTGA+AGG 0.610352 3_2:+70435949 Msa0421480:three_prime_UTR
GCTTATTAGTTACTGACTGG+TGG 0.612036 3_2:-70436475 None:intergenic
TCCCATCAAGATATATATTG+GGG 0.615451 3_2:+70435934 Msa0421480:three_prime_UTR
CAAAGAAAATATCACTACCC+TGG 0.616662 3_2:-70438912 None:intergenic
GTGGTAAATCAGATTCGCAA+AGG 0.623756 3_2:-70436189 None:intergenic
GAGAAAACTACAGGAAATGG+TGG 0.625183 3_2:-70436208 None:intergenic
TAATGACTTAAACTATATGG+TGG 0.625870 3_2:-70436669 None:intergenic
CGTAAATCTTGCCTTTACCG+AGG 0.629817 3_2:+70435415 Msa0421480:CDS
AATGAAAACAGGTAATATTG+GGG 0.631597 3_2:-70436124 None:intergenic
ATATGGAAGAAGAGATCCCA+GGG 0.632244 3_2:+70438338 Msa0421480:three_prime_UTR
AGAAGCTTTAGACTAGAGAG+GGG 0.633416 3_2:-70436090 None:intergenic
TCACAGAACCTTCTTGAGAG+AGG 0.633499 3_2:+70438374 Msa0421480:three_prime_UTR
TGCACCTGACAAGCTTGAGA+GGG 0.634150 3_2:-70437940 None:intergenic
GACAACATCAGCACTAAGTG+TGG 0.634913 3_2:-70435189 None:intergenic
TCCTGCCTGAGTCTCCAAGG+TGG 0.636112 3_2:+70437013 Msa0421480:three_prime_UTR
ATATATCTAAAGAATTGCGA+GGG 0.637117 3_2:+70436766 Msa0421480:three_prime_UTR
GAAACTACCACCAAGGCCAA+CGG 0.643740 3_2:-70438222 None:intergenic
CACCAATGCCAACTAGAAGA+CGG 0.643763 3_2:-70435271 None:intergenic
TCCTCACCATCAGAAATAAG+GGG 0.648202 3_2:+70435335 Msa0421480:CDS
AATAATTGCTAACCACCCAT+AGG 0.652891 3_2:-70438027 None:intergenic
ACAACCATCATCCCATAATG+TGG 0.657138 3_2:-70438485 None:intergenic
GAGTTCCGAGGTGTATGTGG+GGG 0.660731 3_2:+70438131 Msa0421480:three_prime_UTR
CAGCCATTTGAATGATTGTG+GGG 0.661560 3_2:-70437803 None:intergenic
ATTATTGGAGCAGCAACAGG+TGG 0.665008 3_2:+70435134 Msa0421480:CDS
GAGAACATATGCATCTGGTG+CGG 0.680847 3_2:-70435240 None:intergenic
AGAGTTCCGAGGTGTATGTG+GGG 0.681402 3_2:+70438130 Msa0421480:three_prime_UTR
AATGTGCTTATGATAACTGG+TGG 0.683650 3_2:+70435374 Msa0421480:CDS
ATCTATCCTGAAGAGTTCCG+AGG 0.687042 3_2:+70438119 Msa0421480:three_prime_UTR
CGGTAAAGGCAAGATTTACG+AGG 0.690136 3_2:-70435412 None:intergenic
AAGAAAGATAGGCCTAACCT+CGG 0.690515 3_2:-70435432 None:intergenic
GTATCATAAGCACATTTACG+AGG 0.692338 3_2:-70435471 None:intergenic
CCACAAATACAACCTATGGG+TGG 0.700140 3_2:+70438015 Msa0421480:three_prime_UTR
CTTGCTCAGAAACAGCTGTG+AGG 0.709753 3_2:-70437238 None:intergenic
GAATCACGAAACTACCACCA+AGG 0.713908 3_2:-70438229 None:intergenic
GTTTAATGGATGTTAGACCA+TGG 0.717192 3_2:+70436358 Msa0421480:three_prime_UTR
CAGTAGAAGAGATAACACCA+TGG 0.775351 3_2:-70436375 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATCATCTTTAATATATAAAA+GGG - chr3_2:70434644-70434663 None:intergenic 10.0%
!! AATCATCTTTAATATATAAA+AGG - chr3_2:70434645-70434664 None:intergenic 10.0%
!!! TTATTTGTTGAAATTTTATT+TGG + chr3_2:70436839-70436858 Msa0421480:three_prime_UTR 10.0%
!! TATTAATCCATTAAATAAAT+GGG - chr3_2:70437426-70437445 None:intergenic 10.0%
!! AATTCAACAGTTAAAATTAT+GGG - chr3_2:70434759-70434778 None:intergenic 15.0%
!! TTAGTATAGAAAAAATGAAA+AGG - chr3_2:70434926-70434945 None:intergenic 15.0%
!!! GATATAAAAAGCATATATAA+TGG + chr3_2:70435655-70435674 Msa0421480:three_prime_UTR 15.0%
!!! ATATGAAATAAGCAATTTTT+GGG - chr3_2:70435867-70435886 None:intergenic 15.0%
!!! AATATGAAATAAGCAATTTT+TGG - chr3_2:70435868-70435887 None:intergenic 15.0%
!! CTATTAATCCATTAAATAAA+TGG - chr3_2:70437427-70437446 None:intergenic 15.0%
!!! CATTTATTTAATGGATTAAT+AGG + chr3_2:70437425-70437444 Msa0421480:intron 15.0%
!! AGCGAAAAAAATAATATAAA+GGG - chr3_2:70438060-70438079 None:intergenic 15.0%
!! CAATTCAACAGTTAAAATTA+TGG - chr3_2:70434760-70434779 None:intergenic 20.0%
!!! CATAATTTTAACTGTTGAAT+TGG + chr3_2:70434758-70434777 Msa0421480:intron 20.0%
!!! AATTTTTTACAAGTAGTATG+CGG + chr3_2:70434843-70434862 Msa0421480:intron 20.0%
!!! TCATTTTTTCTATACTAATG+TGG + chr3_2:70434928-70434947 Msa0421480:intron 20.0%
!!! CATTTTTTCTATACTAATGT+GGG + chr3_2:70434929-70434948 Msa0421480:intron 20.0%
!!! ATTTTTTCTATACTAATGTG+GGG + chr3_2:70434930-70434949 Msa0421480:intron 20.0%
!! TAACCATAAATCACTAAATT+AGG - chr3_2:70435995-70436014 None:intergenic 20.0%
!! TAATGAAAACAGGTAATATT+GGG - chr3_2:70436128-70436147 None:intergenic 20.0%
!! TTAATGAAAACAGGTAATAT+TGG - chr3_2:70436129-70436148 None:intergenic 20.0%
!!! TTCTTAATGAACTTGTTTAA+TGG + chr3_2:70436344-70436363 Msa0421480:three_prime_UTR 20.0%
!! CTAAATTTGATACTTTAATC+TGG + chr3_2:70436561-70436580 Msa0421480:three_prime_UTR 20.0%
!! CTTTAATGACTTAAACTATA+TGG - chr3_2:70436675-70436694 None:intergenic 20.0%
!! CATATAGTTTAAGTCATTAA+AGG + chr3_2:70436673-70436692 Msa0421480:three_prime_UTR 20.0%
!! AATTAAAGAAAAATCCTAAC+AGG - chr3_2:70436884-70436903 None:intergenic 20.0%
!!! CTGCTTTATTAAAATTCATT+AGG - chr3_2:70436920-70436939 None:intergenic 20.0%
!!! CTAATGAATTTTAATAAAGC+AGG + chr3_2:70436918-70436937 Msa0421480:three_prime_UTR 20.0%
!!! TTTTTTTTATGCATTACGTT+TGG + chr3_2:70437067-70437086 Msa0421480:intron 20.0%
!!! TTTTTTTATGCATTACGTTT+GGG + chr3_2:70437068-70437087 Msa0421480:intron 20.0%
!!! AAACTGTTATTTGTGATTTT+AGG + chr3_2:70437459-70437478 Msa0421480:intron 20.0%
!!! AACTGTTATTTGTGATTTTA+GGG + chr3_2:70437460-70437479 Msa0421480:intron 20.0%
!!! CTAAAGAATTCTTTTTCAAA+TGG + chr3_2:70437604-70437623 Msa0421480:intron 20.0%
!! CTGCATAATAATGAAAATAT+GGG - chr3_2:70437739-70437758 None:intergenic 20.0%
!! GAGCGAAAAAAATAATATAA+AGG - chr3_2:70438061-70438080 None:intergenic 20.0%
!!! TTTTGGGAGAATTTTAATTT+AGG + chr3_2:70438594-70438613 Msa0421480:three_prime_UTR 20.0%
!! ATAAGAATTAAGCGAAATAA+TGG + chr3_2:70438641-70438660 Msa0421480:three_prime_UTR 20.0%
!!! AAGATGATTTTGATGATGTT+CGG + chr3_2:70434656-70434675 Msa0421480:intron 25.0%
! TTCTCATTATTCAATGTTGT+TGG + chr3_2:70434708-70434727 Msa0421480:intron 25.0%
!!! TTTTTTCTATACTAATGTGG+GGG + chr3_2:70434931-70434950 Msa0421480:intron 25.0%
! TTCCTACATACTATTAAACT+AGG - chr3_2:70435539-70435558 None:intergenic 25.0%
! TACCTCTTTAAACTTCTAAA+TGG - chr3_2:70435590-70435609 None:intergenic 25.0%
!! AGCATAAATCACATATTTTG+AGG + chr3_2:70435678-70435697 Msa0421480:three_prime_UTR 25.0%
! AAGTGATAGCATATATTGTT+AGG + chr3_2:70435734-70435753 Msa0421480:three_prime_UTR 25.0%
!! TGTCATAAGTGATAAACTTT+TGG + chr3_2:70435768-70435787 Msa0421480:three_prime_UTR 25.0%
! ATTGCTTATTTCATATTTGC+TGG + chr3_2:70435871-70435890 Msa0421480:three_prime_UTR 25.0%
! ATTCCCATCAAGATATATAT+TGG + chr3_2:70435932-70435951 Msa0421480:three_prime_UTR 25.0%
! TTCCCATCAAGATATATATT+GGG + chr3_2:70435933-70435952 Msa0421480:three_prime_UTR 25.0%
! AATGAAAACAGGTAATATTG+GGG - chr3_2:70436127-70436146 None:intergenic 25.0%
! AGAAGACAAAGAAATGTAAA+GGG - chr3_2:70436258-70436277 None:intergenic 25.0%
! AAGAAGACAAAGAAATGTAA+AGG - chr3_2:70436259-70436278 None:intergenic 25.0%
! AGTGTAGAAAAAGAAAATCA+TGG + chr3_2:70436281-70436300 Msa0421480:three_prime_UTR 25.0%
! TATGCAATTTAAGCTCATTT+GGG - chr3_2:70436419-70436438 None:intergenic 25.0%
! TTATGCAATTTAAGCTCATT+TGG - chr3_2:70436420-70436439 None:intergenic 25.0%
! AGTAACTAATAAGCTATAAG+TGG + chr3_2:70436484-70436503 Msa0421480:three_prime_UTR 25.0%
! ATTTGATACTTTAATCTGGT+TGG + chr3_2:70436565-70436584 Msa0421480:three_prime_UTR 25.0%
! TTTGATACTTTAATCTGGTT+GGG + chr3_2:70436566-70436585 Msa0421480:three_prime_UTR 25.0%
! TAATGACTTAAACTATATGG+TGG - chr3_2:70436672-70436691 None:intergenic 25.0%
! TATATATCTAAAGAATTGCG+AGG + chr3_2:70436765-70436784 Msa0421480:three_prime_UTR 25.0%
! ATATATCTAAAGAATTGCGA+GGG + chr3_2:70436766-70436785 Msa0421480:three_prime_UTR 25.0%
! AAAAAAAGTTTATCACCTTC+AGG - chr3_2:70437044-70437063 None:intergenic 25.0%
! TGAAACACCCATTTATTTAA+TGG + chr3_2:70437416-70437435 Msa0421480:intron 25.0%
! ACTGTAGTTAATTAGAAAAC+TGG + chr3_2:70437527-70437546 Msa0421480:intron 25.0%
!! ACTTCCATTTCTTATTTCAA+TGG + chr3_2:70437567-70437586 Msa0421480:intron 25.0%
!! CTTCCATTTCTTATTTCAAT+GGG + chr3_2:70437568-70437587 Msa0421480:intron 25.0%
! CCTGCATAATAATGAAAATA+TGG - chr3_2:70437740-70437759 None:intergenic 25.0%
!! CCATATTTTCATTATTATGC+AGG + chr3_2:70437737-70437756 Msa0421480:intron 25.0%
!!! TATATTATTTTTTTCGCTCC+AGG + chr3_2:70438062-70438081 Msa0421480:three_prime_UTR 25.0%
!! ACAAATGAAACATTTAGAAC+TGG - chr3_2:70438403-70438422 None:intergenic 25.0%
! TATCGTTACAAAGACATTAT+TGG + chr3_2:70438531-70438550 Msa0421480:three_prime_UTR 25.0%
! AAACATCTCTTCAATTGAAA+AGG - chr3_2:70438724-70438743 None:intergenic 25.0%
! CTTACTAAATTAACTACTCT+TGG - chr3_2:70438771-70438790 None:intergenic 25.0%
! GTAGTTAATTTAGTAAGAGA+TGG + chr3_2:70438774-70438793 Msa0421480:three_prime_UTR 25.0%
!!! TTTTTTGTTTTTGAAGACCA+GGG + chr3_2:70438895-70438914 Msa0421480:three_prime_UTR 25.0%
!! AGTTTTAACAGCTGAATTCT+TGG - chr3_2:70434800-70434819 None:intergenic 30.0%
GGCAATAAACATATGAATCT+TGG - chr3_2:70434878-70434897 None:intergenic 30.0%
GAGAAACATAACTATCTAAC+TGG + chr3_2:70434980-70434999 Msa0421480:intron 30.0%
TGTTCAATTATTGCCTACTT+TGG + chr3_2:70435045-70435064 Msa0421480:intron 30.0%
! AACAATCTAGAATCCAAAGT+AGG - chr3_2:70435061-70435080 None:intergenic 30.0%
ACAAATGTGCTTATGATAAC+TGG + chr3_2:70435371-70435390 Msa0421480:CDS 30.0%
TAAAGGAAGCAAAGAAAGAT+AGG - chr3_2:70435446-70435465 None:intergenic 30.0%
ACATTTACGAGGAGATTTAA+AGG - chr3_2:70435463-70435482 None:intergenic 30.0%
GTAAATGTGCTTATGATACT+TGG + chr3_2:70435475-70435494 Msa0421480:three_prime_UTR 30.0%
TGAGTAGATAAAAGTTTCTG+TGG + chr3_2:70435507-70435526 Msa0421480:three_prime_UTR 30.0%
GACCTAGTTTAATAGTATGT+AGG + chr3_2:70435534-70435553 Msa0421480:three_prime_UTR 30.0%
ATAGTATGTAGGAATGTATC+TGG + chr3_2:70435545-70435564 Msa0421480:three_prime_UTR 30.0%
CACCATTTAGAAGTTTAAAG+AGG + chr3_2:70435585-70435604 Msa0421480:three_prime_UTR 30.0%
! TTTATGATTGTTGTTGTGTG+AGG + chr3_2:70435707-70435726 Msa0421480:three_prime_UTR 30.0%
TGATAGCATATATTGTTAGG+AGG + chr3_2:70435737-70435756 Msa0421480:three_prime_UTR 30.0%
TCCCATCAAGATATATATTG+GGG + chr3_2:70435934-70435953 Msa0421480:three_prime_UTR 30.0%
CTGCCTAATTTAGTGATTTA+TGG + chr3_2:70435989-70436008 Msa0421480:three_prime_UTR 30.0%
CTGTCTCTCTTACATATAAA+AGG + chr3_2:70436043-70436062 Msa0421480:three_prime_UTR 30.0%
AAATCATGGAAAGAAATGTC+AGG + chr3_2:70436295-70436314 Msa0421480:three_prime_UTR 30.0%
ATAGCTTATTAGTTACTGAC+TGG - chr3_2:70436481-70436500 None:intergenic 30.0%
TTTAATCTGGTTGGGAATAT+AGG + chr3_2:70436574-70436593 Msa0421480:three_prime_UTR 30.0%
!!! TTTTCTACTCTCTAAAGTAG+AGG - chr3_2:70436609-70436628 None:intergenic 30.0%
AATCACCATGTACTCAAATT+GGG + chr3_2:70436733-70436752 Msa0421480:three_prime_UTR 30.0%
GTAACCATTATCATAGTGAA+AGG + chr3_2:70436805-70436824 Msa0421480:three_prime_UTR 30.0%
! TTAGCCTTTCACTATGATAA+TGG - chr3_2:70436812-70436831 None:intergenic 30.0%
!! ATTTTAATAAAGCAGGTTCC+TGG + chr3_2:70436925-70436944 Msa0421480:three_prime_UTR 30.0%
! TTTTAATAAAGCAGGTTCCT+GGG + chr3_2:70436926-70436945 Msa0421480:three_prime_UTR 30.0%
AATGCTTTCCTTATGCTAAA+AGG + chr3_2:70437112-70437131 Msa0421480:intron 30.0%
GTATCTCTTATGTACAGAAT+AGG + chr3_2:70437147-70437166 Msa0421480:intron 30.0%
TAGGAAAGATGAAGCTATTT+CGG + chr3_2:70437166-70437185 Msa0421480:three_prime_UTR 30.0%
GCGTTCATAGTTATAGATAT+TGG - chr3_2:70437198-70437217 None:intergenic 30.0%
ACGAAAGAACATTAGATACA+TGG + chr3_2:70437271-70437290 Msa0421480:three_prime_UTR 30.0%
!!! ATCAGAACTGCTTTTTTTGT+TGG + chr3_2:70437314-70437333 Msa0421480:three_prime_UTR 30.0%
!!! TCAGAACTGCTTTTTTTGTT+GGG + chr3_2:70437315-70437334 Msa0421480:three_prime_UTR 30.0%
AATAAATGGGTGTTTCAGAT+TGG - chr3_2:70437413-70437432 None:intergenic 30.0%
!!! GATTTTAGGGCTATACTTTT+TGG + chr3_2:70437473-70437492 Msa0421480:intron 30.0%
TAGTTAATTAGAAAACTGGC+AGG + chr3_2:70437531-70437550 Msa0421480:intron 30.0%
AGTTAATTAGAAAACTGGCA+GGG + chr3_2:70437532-70437551 Msa0421480:intron 30.0%
ATGCCCATTGAAATAAGAAA+TGG - chr3_2:70437574-70437593 None:intergenic 30.0%
ATTTATCTAATTGACCATGC+AGG + chr3_2:70437903-70437922 Msa0421480:three_prime_UTR 30.0%
TTTATCTAATTGACCATGCA+GGG + chr3_2:70437904-70437923 Msa0421480:three_prime_UTR 30.0%
TGGTATGTATGATTGATATG+TGG + chr3_2:70438551-70438570 Msa0421480:three_prime_UTR 30.0%
GGTATGTATGATTGATATGT+GGG + chr3_2:70438552-70438571 Msa0421480:three_prime_UTR 30.0%
! TTGATCTTCCATAGCTTTTT+GGG + chr3_2:70438578-70438597 Msa0421480:three_prime_UTR 30.0%
AAAATTCTCCCAAAAAGCTA+TGG - chr3_2:70438589-70438608 None:intergenic 30.0%
AAAAGGTTATCAACCAAAGT+CGG - chr3_2:70438707-70438726 None:intergenic 30.0%
!! CTACTTTTGTGATGTATGTA+CGG + chr3_2:70438846-70438865 Msa0421480:three_prime_UTR 30.0%
!!! GTTTTTTGTTTTTGAAGACC+AGG + chr3_2:70438894-70438913 Msa0421480:three_prime_UTR 30.0%
CTGTTAAAACTTGAGTGCAT+CGG + chr3_2:70434809-70434828 Msa0421480:intron 35.0%
! TATTGCCTTTTCTGTTTTCC+TGG + chr3_2:70434891-70434910 Msa0421480:intron 35.0%
AAGAACCAGGAAAACAGAAA+AGG - chr3_2:70434899-70434918 None:intergenic 35.0%
! TTTTACATCCTTACGTTTGC+AGG + chr3_2:70435079-70435098 Msa0421480:intron 35.0%
AATAGTTTCCTGCAAACGTA+AGG - chr3_2:70435090-70435109 None:intergenic 35.0%
AACTATTGTAAGCATGGCAT+TGG + chr3_2:70435103-70435122 Msa0421480:CDS 35.0%
TACTCTTGGATCAGTTGTTA+TGG + chr3_2:70435214-70435233 Msa0421480:CDS 35.0%
AGTATGAGAACATATGCATC+TGG - chr3_2:70435248-70435267 None:intergenic 35.0%
GATGCATATGTTCTCATACT+TGG + chr3_2:70435248-70435267 Msa0421480:CDS 35.0%
GAGGATTCTGCAATATATAC+AGG - chr3_2:70435320-70435339 None:intergenic 35.0%
AATCCTCACCATCAGAAATA+AGG + chr3_2:70435333-70435352 Msa0421480:CDS 35.0%
ATCCTCACCATCAGAAATAA+GGG + chr3_2:70435334-70435353 Msa0421480:CDS 35.0%
AATGTGCTTATGATAACTGG+TGG + chr3_2:70435374-70435393 Msa0421480:CDS 35.0%
GTATCATAAGCACATTTACG+AGG - chr3_2:70435474-70435493 None:intergenic 35.0%
CTCTATTTCGACTTTCCAAT+AGG + chr3_2:70435615-70435634 Msa0421480:three_prime_UTR 35.0%
ACTTTCCAATAGGTCAGAAA+AGG + chr3_2:70435625-70435644 Msa0421480:three_prime_UTR 35.0%
! TTATGCCTTTTCTGACCTAT+TGG - chr3_2:70435633-70435652 None:intergenic 35.0%
ATCAAGCATTCTGTTTCAAC+AGG - chr3_2:70435803-70435822 None:intergenic 35.0%
GCCCCAATATATATCTTGAT+GGG - chr3_2:70435938-70435957 None:intergenic 35.0%
TGCCCCAATATATATCTTGA+TGG - chr3_2:70435939-70435958 None:intergenic 35.0%
!! TAGAAGCTTTAGACTAGAGA+GGG - chr3_2:70436094-70436113 None:intergenic 35.0%
!! ATAGAAGCTTTAGACTAGAG+AGG - chr3_2:70436095-70436114 None:intergenic 35.0%
CATGCTGTGTTAATGAAAAC+AGG - chr3_2:70436138-70436157 None:intergenic 35.0%
TAAATCAGATTCGCAAAGGA+TGG - chr3_2:70436188-70436207 None:intergenic 35.0%
TCAATTGCAGAGAAAACTAC+AGG - chr3_2:70436220-70436239 None:intergenic 35.0%
! GTTTAATGGATGTTAGACCA+TGG + chr3_2:70436358-70436377 Msa0421480:three_prime_UTR 35.0%
! TATAAGTGGCATGTTGTTTG+TGG + chr3_2:70436498-70436517 Msa0421480:three_prime_UTR 35.0%
! ATAAGTGGCATGTTGTTTGT+GGG + chr3_2:70436499-70436518 Msa0421480:three_prime_UTR 35.0%
GAATCACCATGTACTCAAAT+TGG + chr3_2:70436732-70436751 Msa0421480:three_prime_UTR 35.0%
GTTTACCCAATTTGAGTACA+TGG - chr3_2:70436741-70436760 None:intergenic 35.0%
! TTGTATTGCTGTTACCTGTT+AGG + chr3_2:70436867-70436886 Msa0421480:three_prime_UTR 35.0%
ACACAAAACTGAATAACAGC+TGG - chr3_2:70436985-70437004 None:intergenic 35.0%
!! TAGCATAAGGAAAGCATTCA+AGG - chr3_2:70437110-70437129 None:intergenic 35.0%
! GTAAGACACCTTTTAGCATA+AGG - chr3_2:70437123-70437142 None:intergenic 35.0%
! GGTAATTGACTTCATCTTCT+AGG - chr3_2:70437220-70437239 None:intergenic 35.0%
!!! CAGAACTGCTTTTTTTGTTG+GGG + chr3_2:70437316-70437335 Msa0421480:three_prime_UTR 35.0%
TAGAAGAAGAGCTAACTGAT+TGG - chr3_2:70437838-70437857 None:intergenic 35.0%
ACTCCACAAATACAACCTAT+GGG + chr3_2:70438012-70438031 Msa0421480:three_prime_UTR 35.0%
AATAATTGCTAACCACCCAT+AGG - chr3_2:70438030-70438049 None:intergenic 35.0%
TATGGGTGGTTAGCAATTAT+TGG + chr3_2:70438029-70438048 Msa0421480:three_prime_UTR 35.0%
ATGGGTGGTTAGCAATTATT+GGG + chr3_2:70438030-70438049 Msa0421480:three_prime_UTR 35.0%
!!! TATTTTTTTCGCTCCAGGAA+TGG + chr3_2:70438067-70438086 Msa0421480:three_prime_UTR 35.0%
!!! ATTTTTTTCGCTCCAGGAAT+GGG + chr3_2:70438068-70438087 Msa0421480:three_prime_UTR 35.0%
CTTTCAATTTCTGATTCCGT+TGG + chr3_2:70438206-70438225 Msa0421480:three_prime_UTR 35.0%
!! GATTCTTGGTGTTATATGTG+TGG + chr3_2:70438247-70438266 Msa0421480:three_prime_UTR 35.0%
AGGATTGACATTTGAAGAAG+TGG + chr3_2:70438310-70438329 Msa0421480:three_prime_UTR 35.0%
TGAGTCATAATCTTTACCCT+GGG - chr3_2:70438357-70438376 None:intergenic 35.0%
TTTGTGAGCTGCAGTATTAT+TGG + chr3_2:70438418-70438437 Msa0421480:three_prime_UTR 35.0%
! CTTGATCTTCCATAGCTTTT+TGG + chr3_2:70438577-70438596 Msa0421480:three_prime_UTR 35.0%
TTAAGCGAAATAATGGTTCG+TGG + chr3_2:70438648-70438667 Msa0421480:three_prime_UTR 35.0%
AAAGGTTATCAACCAAAGTC+GGG - chr3_2:70438706-70438725 None:intergenic 35.0%
TAAGAGATGGAATGTGTTCT+TGG + chr3_2:70438787-70438806 Msa0421480:three_prime_UTR 35.0%
CAAAGAAAATATCACTACCC+TGG - chr3_2:70438915-70438934 None:intergenic 35.0%
GAGAAAAAGCTTGTACCTGA+AGG - chr3_2:70434693-70434712 None:intergenic 40.0%
TTGGCTTCAGAATGCATAAG+AGG + chr3_2:70434727-70434746 Msa0421480:intron 40.0%
TGGCTTCAGAATGCATAAGA+GGG + chr3_2:70434728-70434747 Msa0421480:intron 40.0%
TTAAAACTTGAGTGCATCGG+TGG + chr3_2:70434812-70434831 Msa0421480:intron 40.0%
ATGAAAAGGACAGAAGAACC+AGG - chr3_2:70434912-70434931 None:intergenic 40.0%
TTCTATACTAATGTGGGGGT+TGG + chr3_2:70434935-70434954 Msa0421480:intron 40.0%
TCTATACTAATGTGGGGGTT+GGG + chr3_2:70434936-70434955 Msa0421480:intron 40.0%
GCAGGAAACTATTGTAAGCA+TGG + chr3_2:70435097-70435116 Msa0421480:intron 40.0%
!! ATTGTAAGCATGGCATTGGT+TGG + chr3_2:70435107-70435126 Msa0421480:CDS 40.0%
!! GCATTGGTTGGTGCAATTAT+TGG + chr3_2:70435119-70435138 Msa0421480:CDS 40.0%
! GGCTGGATTAATGATGCTTT+TGG + chr3_2:70435155-70435174 Msa0421480:CDS 40.0%
! TGATGCTTTTGGACGTAAGA+AGG + chr3_2:70435166-70435185 Msa0421480:CDS 40.0%
GCTGATGTTGTCTTTACTCT+TGG + chr3_2:70435200-70435219 Msa0421480:CDS 40.0%
TCCTCACCATCAGAAATAAG+GGG + chr3_2:70435335-70435354 Msa0421480:CDS 40.0%
!! AACGAACCCCTTATTTCTGA+TGG - chr3_2:70435344-70435363 None:intergenic 40.0%
AAGAAAGATAGGCCTAACCT+CGG - chr3_2:70435435-70435454 None:intergenic 40.0%
!! ATTCCGTTTTTGCAGCTTGA+AGG + chr3_2:70435903-70435922 Msa0421480:three_prime_UTR 40.0%
!! TTCCGTTTTTGCAGCTTGAA+GGG + chr3_2:70435904-70435923 Msa0421480:three_prime_UTR 40.0%
!! AGAAGCTTTAGACTAGAGAG+GGG - chr3_2:70436093-70436112 None:intergenic 40.0%
AGATTCGCAAAGGATGGTTT+GGG - chr3_2:70436182-70436201 None:intergenic 40.0%
GTGGTAAATCAGATTCGCAA+AGG - chr3_2:70436192-70436211 None:intergenic 40.0%
GAGAAAACTACAGGAAATGG+TGG - chr3_2:70436211-70436230 None:intergenic 40.0%
GCAGAGAAAACTACAGGAAA+TGG - chr3_2:70436214-70436233 None:intergenic 40.0%
CAGTAGAAGAGATAACACCA+TGG - chr3_2:70436378-70436397 None:intergenic 40.0%
! GCTTATTAGTTACTGACTGG+TGG - chr3_2:70436478-70436497 None:intergenic 40.0%
!! CTACTCTCTAAAGTAGAGGT+TGG - chr3_2:70436605-70436624 None:intergenic 40.0%
!! AGGAAAGCATTCAAGGAATG+AGG - chr3_2:70437103-70437122 None:intergenic 40.0%
!! TGCTAAAAGGTGTCTTACAC+TGG + chr3_2:70437125-70437144 Msa0421480:intron 40.0%
! CATGGATGTTTTCCGATCAA+CGG + chr3_2:70437289-70437308 Msa0421480:three_prime_UTR 40.0%
! CAGTTCTGATTTCCGTTGAT+CGG - chr3_2:70437304-70437323 None:intergenic 40.0%
TGTCTCAATAACCTGAAGTC+CGG - chr3_2:70437342-70437361 None:intergenic 40.0%
CAGCCATTTGAATGATTGTG+GGG - chr3_2:70437806-70437825 None:intergenic 40.0%
CCAGCCATTTGAATGATTGT+GGG - chr3_2:70437807-70437826 None:intergenic 40.0%
CCACAATCATTCAAATGGCT+GGG + chr3_2:70437805-70437824 Msa0421480:three_prime_UTR 40.0%
TTGTGGAGTCAGATGATTGA+AGG - chr3_2:70438001-70438020 None:intergenic 40.0%
GACTCCACAAATACAACCTA+TGG + chr3_2:70438011-70438030 Msa0421480:three_prime_UTR 40.0%
AATGTCAATCCTTTCGTCTC+TGG - chr3_2:70438302-70438321 None:intergenic 40.0%
GGATCTCTTCTTCCATATGA+GGG - chr3_2:70438336-70438355 None:intergenic 40.0%
ATATGGAAGAAGAGATCCCA+GGG + chr3_2:70438338-70438357 Msa0421480:three_prime_UTR 40.0%
GTGAGTCATAATCTTTACCC+TGG - chr3_2:70438358-70438377 None:intergenic 40.0%
AGTTGTTAGCTGCCACATTA+TGG + chr3_2:70438473-70438492 Msa0421480:three_prime_UTR 40.0%
GTTGTTAGCTGCCACATTAT+GGG + chr3_2:70438474-70438493 Msa0421480:three_prime_UTR 40.0%
ACAACCATCATCCCATAATG+TGG - chr3_2:70438488-70438507 None:intergenic 40.0%
TTAACCATGTATCCCGACTT+TGG + chr3_2:70438691-70438710 Msa0421480:three_prime_UTR 40.0%
! TGTTTGCTACTTCCGAAGTT+AGG + chr3_2:70438739-70438758 Msa0421480:three_prime_UTR 40.0%
TCTTGGCAGATTCCTAACTT+CGG - chr3_2:70438754-70438773 None:intergenic 40.0%
GGAATGTGTTCTTGGCAAAT+AGG + chr3_2:70438795-70438814 Msa0421480:three_prime_UTR 40.0%
! TACTGTTATTTGCTCCGTGC+AGG + chr3_2:70434604-70434623 Msa0421480:intron 45.0%
! TCCGTGCAGGTGTTATATCA+GGG + chr3_2:70434617-70434636 Msa0421480:intron 45.0%
TCGGAAAAGTAGCTTCCTTC+AGG + chr3_2:70434675-70434694 Msa0421480:intron 45.0%
CTATACTAATGTGGGGGTTG+GGG + chr3_2:70434937-70434956 Msa0421480:intron 45.0%
GCAATTATTGGAGCAGCAAC+AGG + chr3_2:70435131-70435150 Msa0421480:CDS 45.0%
ATTATTGGAGCAGCAACAGG+TGG + chr3_2:70435134-70435153 Msa0421480:CDS 45.0%
GACAACATCAGCACTAAGTG+TGG - chr3_2:70435192-70435211 None:intergenic 45.0%
GAGAACATATGCATCTGGTG+CGG - chr3_2:70435243-70435262 None:intergenic 45.0%
ATACTTGGCCGTCTTCTAGT+TGG + chr3_2:70435263-70435282 Msa0421480:CDS 45.0%
CACCAATGCCAACTAGAAGA+CGG - chr3_2:70435274-70435293 None:intergenic 45.0%
!! TCTTCTAGTTGGCATTGGTG+TGG + chr3_2:70435274-70435293 Msa0421480:CDS 45.0%
!! CTTCTAGTTGGCATTGGTGT+GGG + chr3_2:70435275-70435294 Msa0421480:CDS 45.0%
!! ACCCCTTATTTCTGATGGTG+AGG - chr3_2:70435339-70435358 None:intergenic 45.0%
CGGTAAAGGCAAGATTTACG+AGG - chr3_2:70435415-70435434 None:intergenic 45.0%
CGTAAATCTTGCCTTTACCG+AGG + chr3_2:70435415-70435434 Msa0421480:CDS 45.0%
ATCTTGCCTTTACCGAGGTT+AGG + chr3_2:70435420-70435439 Msa0421480:CDS 45.0%
!! TCCGTTTTTGCAGCTTGAAG+GGG + chr3_2:70435905-70435924 Msa0421480:three_prime_UTR 45.0%
CAGATTCGCAAAGGATGGTT+TGG - chr3_2:70436183-70436202 None:intergenic 45.0%
!!! ACTGCTTTTTTTGTTGGGGC+CGG + chr3_2:70437320-70437339 Msa0421480:three_prime_UTR 45.0%
! TCCACTTTCTCATGACTTGC+TGG + chr3_2:70437386-70437405 Msa0421480:intron 45.0%
!! CCACTTTCTCATGACTTGCT+GGG + chr3_2:70437387-70437406 Msa0421480:intron 45.0%
CAGCCCCACAATCATTCAAA+TGG + chr3_2:70437800-70437819 Msa0421480:three_prime_UTR 45.0%
CCCACAATCATTCAAATGGC+TGG + chr3_2:70437804-70437823 Msa0421480:three_prime_UTR 45.0%
CCCAGCCATTTGAATGATTG+TGG - chr3_2:70437808-70437827 None:intergenic 45.0%
CTTCTATCTCTCATCGTTGC+TGG + chr3_2:70437852-70437871 Msa0421480:three_prime_UTR 45.0%
AACGCTGCTGGAACAATTCT+TGG + chr3_2:70437879-70437898 Msa0421480:three_prime_UTR 45.0%
CCACCCATAGGTTGTATTTG+TGG - chr3_2:70438018-70438037 None:intergenic 45.0%
CCACAAATACAACCTATGGG+TGG + chr3_2:70438015-70438034 Msa0421480:three_prime_UTR 45.0%
ATTTCCGAGTTCACAGTCCA+TGG - chr3_2:70438101-70438120 None:intergenic 45.0%
ATCTATCCTGAAGAGTTCCG+AGG + chr3_2:70438119-70438138 Msa0421480:three_prime_UTR 45.0%
AAGAGTTCCGAGGTGTATGT+GGG + chr3_2:70438129-70438148 Msa0421480:three_prime_UTR 45.0%
GCATGTCAGCTACTGTAAAC+TGG + chr3_2:70438153-70438172 Msa0421480:three_prime_UTR 45.0%
! ATTTCTGATTCCGTTGGCCT+TGG + chr3_2:70438212-70438231 Msa0421480:three_prime_UTR 45.0%
GAATCACGAAACTACCACCA+AGG - chr3_2:70438232-70438251 None:intergenic 45.0%
GGTGGTAGTTTCGTGATTCT+TGG + chr3_2:70438233-70438252 Msa0421480:three_prime_UTR 45.0%
TTGTTTGTGCCAGAGACGAA+AGG + chr3_2:70438290-70438309 Msa0421480:three_prime_UTR 45.0%
TTGAAGAAGTGGCCCTCATA+TGG + chr3_2:70438321-70438340 Msa0421480:three_prime_UTR 45.0%
GGGATCTCTTCTTCCATATG+AGG - chr3_2:70438337-70438356 None:intergenic 45.0%
CATATGGAAGAAGAGATCCC+AGG + chr3_2:70438337-70438356 Msa0421480:three_prime_UTR 45.0%
TCACAGAACCTTCTTGAGAG+AGG + chr3_2:70438374-70438393 Msa0421480:three_prime_UTR 45.0%
AGTATTATTGGACGCGAGCT+AGG + chr3_2:70438430-70438449 Msa0421480:three_prime_UTR 45.0%
GTGGCAGCTAACAACTCAAA+TGG - chr3_2:70438469-70438488 None:intergenic 45.0%
GCGAAATAATGGTTCGTGGT+TGG + chr3_2:70438652-70438671 Msa0421480:three_prime_UTR 45.0%
GGATACATGGTTAATCGAGC+TGG - chr3_2:70438685-70438704 None:intergenic 45.0%
TCAACCAAAGTCGGGATACA+TGG - chr3_2:70438698-70438717 None:intergenic 45.0%
! CTCCGTGCAGGTGTTATATC+AGG + chr3_2:70434616-70434635 Msa0421480:intron 50.0%
CCCCTGATATAACACCTGCA+CGG - chr3_2:70434621-70434640 None:intergenic 50.0%
! CCGTGCAGGTGTTATATCAG+GGG + chr3_2:70434618-70434637 Msa0421480:intron 50.0%
GATAGGCCTAACCTCGGTAA+AGG - chr3_2:70435429-70435448 None:intergenic 50.0%
GCCCCTTCAAGCTGCAAAAA+CGG - chr3_2:70435909-70435928 None:intergenic 50.0%
TAAAGCAGGTTCCTGGGACA+TGG + chr3_2:70436932-70436951 Msa0421480:three_prime_UTR 50.0%
! TTTTCCTGCCTGAGTCTCCA+AGG + chr3_2:70437010-70437029 Msa0421480:three_prime_UTR 50.0%
AAAAGCCACCTTGGAGACTC+AGG - chr3_2:70437021-70437040 None:intergenic 50.0%
! TCCAAGGTGGCTTTTCCTGA+AGG + chr3_2:70437026-70437045 Msa0421480:three_prime_UTR 50.0%
ACCTTCAGGAAAAGCCACCT+TGG - chr3_2:70437030-70437049 None:intergenic 50.0%
CTTGCTCAGAAACAGCTGTG+AGG - chr3_2:70437241-70437260 None:intergenic 50.0%
CCCAGCAAGTCATGAGAAAG+TGG - chr3_2:70437390-70437409 None:intergenic 50.0%
! CAGGCTTTTCAGCAGTTCAC+TGG + chr3_2:70437756-70437775 Msa0421480:intron 50.0%
TAATTGACCATGCAGGGCGA+AGG + chr3_2:70437910-70437929 Msa0421480:three_prime_UTR 50.0%
TGCACCTGACAAGCTTGAGA+GGG - chr3_2:70437943-70437962 None:intergenic 50.0%
TTGCACCTGACAAGCTTGAG+AGG - chr3_2:70437944-70437963 None:intergenic 50.0%
GAAGGTAAGACCCTGCAGAA+AGG - chr3_2:70437983-70438002 None:intergenic 50.0%
CATACACCTCGGAACTCTTC+AGG - chr3_2:70438128-70438147 None:intergenic 50.0%
GAAGAGTTCCGAGGTGTATG+TGG + chr3_2:70438128-70438147 Msa0421480:three_prime_UTR 50.0%
AGAGTTCCGAGGTGTATGTG+GGG + chr3_2:70438130-70438149 Msa0421480:three_prime_UTR 50.0%
GAAACTACCACCAAGGCCAA+CGG - chr3_2:70438225-70438244 None:intergenic 50.0%
! ACTGGCTTCCTCTCTCAAGA+AGG - chr3_2:70438385-70438404 None:intergenic 50.0%
GCTGCCACATTATGGGATGA+TGG + chr3_2:70438481-70438500 Msa0421480:three_prime_UTR 50.0%
! GGCCGTCTTCTAGTTGGCAT+TGG + chr3_2:70435269-70435288 Msa0421480:CDS 55.0%
TATTGGGGCAGCATCGCTGA+AGG + chr3_2:70435949-70435968 Msa0421480:three_prime_UTR 55.0%
AGGTTCCTGGGACATGGAGA+TGG + chr3_2:70436938-70436957 Msa0421480:three_prime_UTR 55.0%
AGCATCCATCTCCATGTCCC+AGG - chr3_2:70436946-70436965 None:intergenic 55.0%
TGGGACATGGAGATGGATGC+TGG + chr3_2:70436945-70436964 Msa0421480:three_prime_UTR 55.0%
GGGACATGGAGATGGATGCT+GGG + chr3_2:70436946-70436965 Msa0421480:three_prime_UTR 55.0%
AGATGGATGCTGGGAGTTGC+TGG + chr3_2:70436955-70436974 Msa0421480:three_prime_UTR 55.0%
! TTTTGTTGGGGCCGGACTTC+AGG + chr3_2:70437328-70437347 Msa0421480:three_prime_UTR 55.0%
TTGGCCCTCTCAAGCTTGTC+AGG + chr3_2:70437936-70437955 Msa0421480:three_prime_UTR 55.0%
CGCTGGCAATCCTTTCTGCA+GGG + chr3_2:70437970-70437989 Msa0421480:three_prime_UTR 55.0%
TTTCGCTCCAGGAATGGGAC+CGG + chr3_2:70438073-70438092 Msa0421480:three_prime_UTR 55.0%
GAGTTCACAGTCCATGGCAC+CGG - chr3_2:70438095-70438114 None:intergenic 55.0%
! GGTGCCATGGACTGTGAACT+CGG + chr3_2:70438094-70438113 Msa0421480:three_prime_UTR 55.0%
GAGTTCCGAGGTGTATGTGG+GGG + chr3_2:70438131-70438150 Msa0421480:three_prime_UTR 55.0%
ACATGCCCCCACATACACCT+CGG - chr3_2:70438139-70438158 None:intergenic 55.0%
!! TCTGATTCCGTTGGCCTTGG+TGG + chr3_2:70438215-70438234 Msa0421480:three_prime_UTR 55.0%
TTGGAGCAGCAACAGGTGGC+TGG + chr3_2:70435138-70435157 Msa0421480:CDS 60.0%
GACTAGAGAGGGGACTGCAC+TGG - chr3_2:70436083-70436102 None:intergenic 60.0%
TCCTGCCTGAGTCTCCAAGG+TGG + chr3_2:70437013-70437032 Msa0421480:three_prime_UTR 60.0%
GTTGCTGGCATGAACGCTGC+TGG + chr3_2:70437867-70437886 Msa0421480:three_prime_UTR 60.0%
CCAACTTCCTTCGCCCTGCA+TGG - chr3_2:70437920-70437939 None:intergenic 60.0%
CCATGCAGGGCGAAGGAAGT+TGG + chr3_2:70437917-70437936 Msa0421480:three_prime_UTR 60.0%
GTCAGGTGCAACTGTAGCGC+TGG + chr3_2:70437953-70437972 Msa0421480:three_prime_UTR 60.0%
! GCGCTGGCAATCCTTTCTGC+AGG + chr3_2:70437969-70437988 Msa0421480:three_prime_UTR 60.0%
GCCACCTTGGAGACTCAGGC+AGG - chr3_2:70437017-70437036 None:intergenic 65.0%
!! CATGGCACCGGTCCCATTCC+TGG - chr3_2:70438083-70438102 None:intergenic 65.0%
! CAGGAATGGGACCGGTGCCA+TGG + chr3_2:70438081-70438100 Msa0421480:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 70434529 70438934 70434529 ID=Msa0421480;Name=Msa0421480
chr3_2 mRNA 70434529 70438934 70434529 ID=Msa0421480-mRNA-1;Parent=Msa0421480;Name=Msa0421480-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.5|0.6|0.6|1|0.8|5|2943|125
chr3_2 exon 70434529 70434534 70434529 ID=Msa0421480-mRNA-1:exon:16925;Parent=Msa0421480-mRNA-1
chr3_2 exon 70434859 70434864 70434859 ID=Msa0421480-mRNA-1:exon:16926;Parent=Msa0421480-mRNA-1
chr3_2 exon 70435101 70437047 70435101 ID=Msa0421480-mRNA-1:exon:16927;Parent=Msa0421480-mRNA-1
chr3_2 exon 70437164 70437349 70437164 ID=Msa0421480-mRNA-1:exon:16928;Parent=Msa0421480-mRNA-1
chr3_2 exon 70437759 70438934 70437759 ID=Msa0421480-mRNA-1:exon:16929;Parent=Msa0421480-mRNA-1
chr3_2 CDS 70434529 70434534 70434529 ID=Msa0421480-mRNA-1:cds;Parent=Msa0421480-mRNA-1
chr3_2 CDS 70434859 70434864 70434859 ID=Msa0421480-mRNA-1:cds;Parent=Msa0421480-mRNA-1
chr3_2 CDS 70435101 70435466 70435101 ID=Msa0421480-mRNA-1:cds;Parent=Msa0421480-mRNA-1
chr3_2 three_prime_UTR 70435467 70437047 70435467 ID=Msa0421480-mRNA-1:three_prime_utr;Parent=Msa0421480-mRNA-1
chr3_2 three_prime_UTR 70437164 70437349 70437164 ID=Msa0421480-mRNA-1:three_prime_utr;Parent=Msa0421480-mRNA-1
chr3_2 three_prime_UTR 70437759 70438934 70437759 ID=Msa0421480-mRNA-1:three_prime_utr;Parent=Msa0421480-mRNA-1
Gene Sequence

>Msa0421480

ATGATATATGCGGAAACTATTGTAAGCATGGCATTGGTTGGTGCAATTATTGGAGCAGCAACAGGTGGCTGGATTAATGATGCTTTTGGACGTAAGAAGGCCACACTTAGTGCTGATGTTGTCTTTACTCTTGGATCAGTTGTTATGGCTGCCGCACCAGATGCATATGTTCTCATACTTGGCCGTCTTCTAGTTGGCATTGGTGTGGGCGTAGCTTCTGTCACTGCTCCTGTATATATTGCAGAATCCTCACCATCAGAAATAAGGGGTTCGTTAGTTAGCACAAATGTGCTTATGATAACTGGTGGACAGTTTCTTTCTTACCTCGTAAATCTTGCCTTTACCGAGGTTAGGCCTATCTTTCTTTGCTTCCTTTAA
Protein sequence

>Msa0421480

MIYAETIVSMALVGAIIGAATGGWINDAFGRKKATLSADVVFTLGSVVMAAAPDAYVLILGRLLVGIGVGVASVTAPVYIAESSPSEIRGSLVSTNVLMITGGQFLSYLVNLAFTEVRPIFLCFL*