Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672450 | XP_013442809.2 | 96.190 | 210 | 8 | 0 | 1 | 210 | 1 | 210 | 4.78e-142 | 405 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672450 | A0A396I2U5 | 96.190 | 210 | 8 | 0 | 1 | 210 | 1 | 210 | 2.28e-142 | 405 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0672450 | 0.809500 | 1.835510e-50 | -8.615850e-47 |
| Msa0010490 | Msa0672450 | 0.807980 | 3.876652e-50 | -8.615850e-47 |
| Msa0010500 | Msa0672450 | 0.804618 | 1.981161e-49 | -8.615850e-47 |
| Msa0020390 | Msa0672450 | 0.807297 | 5.415800e-50 | -8.615850e-47 |
| Msa0020410 | Msa0672450 | 0.810088 | 1.371463e-50 | -8.615850e-47 |
| Msa0037880 | Msa0672450 | 0.810836 | 9.454843e-51 | -8.615850e-47 |
| Msa0079070 | Msa0672450 | 0.806850 | 6.731869e-50 | -8.615850e-47 |
| Msa0079180 | Msa0672450 | 0.812281 | 4.588396e-51 | -8.615850e-47 |
| Msa0084380 | Msa0672450 | 0.806890 | 6.602636e-50 | -8.615850e-47 |
| Msa0089820 | Msa0672450 | 0.822363 | 2.466268e-53 | -8.615850e-47 |
| Msa0090550 | Msa0672450 | 0.807910 | 4.012202e-50 | -8.615850e-47 |
| Msa0090570 | Msa0672450 | 0.828020 | 1.133749e-54 | -8.615850e-47 |
| Msa0103250 | Msa0672450 | 0.803275 | 3.768671e-49 | -8.615850e-47 |
| Msa0104230 | Msa0672450 | 0.806456 | 8.155986e-50 | -8.615850e-47 |
| Msa0104240 | Msa0672450 | 0.800649 | 1.305415e-48 | -8.615850e-47 |
| Msa0106710 | Msa0672450 | 0.809375 | 1.951702e-50 | -8.615850e-47 |
| Msa0109590 | Msa0672450 | 0.806842 | 6.758400e-50 | -8.615850e-47 |
| Msa0111080 | Msa0672450 | 0.819995 | 8.666798e-53 | -8.615850e-47 |
| Msa0610130 | Msa0672450 | 0.809592 | 1.753202e-50 | -8.615850e-47 |
| Msa0613110 | Msa0672450 | 0.818341 | 2.061536e-52 | -8.615850e-47 |
| Msa0613340 | Msa0672450 | 0.804358 | 2.244244e-49 | -8.615850e-47 |
| Msa0659210 | Msa0672450 | 0.822093 | 2.848785e-53 | -8.615850e-47 |
| Msa0672450 | Msa0672480 | 0.913781 | 4.131770e-84 | -8.615850e-47 |
| Msa0672450 | Msa0672550 | 0.806924 | 6.493250e-50 | -8.615850e-47 |
| Msa0672450 | Msa0676270 | 0.835601 | 1.525680e-56 | -8.615850e-47 |
| Msa0672450 | Msa0682680 | 0.803883 | 2.818193e-49 | -8.615850e-47 |
| Msa0672450 | Msa0689780 | 0.827570 | 1.454301e-54 | -8.615850e-47 |
| Msa0672450 | Msa0705190 | 0.810686 | 1.018832e-50 | -8.615850e-47 |
| Msa0672450 | Msa0705990 | 0.828324 | 9.575582e-55 | -8.615850e-47 |
| Msa0672450 | Msa0706400 | 0.800489 | 1.406833e-48 | -8.615850e-47 |
| Msa0672450 | Msa0707250 | 0.801365 | 9.320230e-49 | -8.615850e-47 |
| Msa0672450 | Msa0711150 | 0.813025 | 3.153315e-51 | -8.615850e-47 |
| Msa0672450 | Msa0731940 | 0.807512 | 4.876115e-50 | -8.615850e-47 |
| Msa0672450 | Msa0749440 | 0.810381 | 1.185995e-50 | -8.615850e-47 |
| Msa0672450 | Msa0750850 | 0.800835 | 1.195957e-48 | -8.615850e-47 |
| Msa0672450 | Msa0751850 | 0.818066 | 2.379210e-52 | -8.615850e-47 |
| Msa0672450 | Msa0773180 | 0.822820 | 1.930172e-53 | -8.615850e-47 |
| Msa0672450 | Msa0801730 | 0.800306 | 1.532944e-48 | -8.615850e-47 |
| Msa0672450 | Msa0822500 | 0.819314 | 1.239411e-52 | -8.615850e-47 |
| Msa0672450 | Msa0831850 | 0.808545 | 2.938570e-50 | -8.615850e-47 |
| Msa0672450 | Msa0844110 | 0.801688 | 8.000151e-49 | -8.615850e-47 |
| Msa0672450 | Msa0844420 | 0.802216 | 6.233140e-49 | -8.615850e-47 |
| Msa0672450 | Msa0849030 | 0.819252 | 1.280264e-52 | -8.615850e-47 |
| Msa0672450 | Msa0861570 | 0.803689 | 3.091796e-49 | -8.615850e-47 |
| Msa0672450 | Msa0890550 | 0.825594 | 4.304988e-54 | -8.615850e-47 |
| Msa0672450 | Msa0894710 | 0.821464 | 3.981171e-53 | -8.615850e-47 |
| Msa0672450 | Msa0902830 | 0.812389 | 4.346005e-51 | -8.615850e-47 |
| Msa0672450 | Msa0914270 | 0.800621 | 1.322679e-48 | -8.615850e-47 |
| Msa0672450 | Msa0921420 | 0.818448 | 1.949940e-52 | -8.615850e-47 |
| Msa0672450 | Msa0927380 | 0.816697 | 4.838519e-52 | -8.615850e-47 |
| Msa0672450 | Msa0943190 | 0.806859 | 6.704624e-50 | -8.615850e-47 |
| Msa0672450 | Msa0944610 | 0.816939 | 4.269738e-52 | -8.615850e-47 |
| Msa0672450 | Msa0960390 | 0.833454 | 5.284352e-56 | -8.615850e-47 |
| Msa0672450 | Msa0969810 | 0.809883 | 1.517871e-50 | -8.615850e-47 |
| Msa0672450 | Msa0974080 | 0.801283 | 9.684893e-49 | -8.615850e-47 |
| Msa0672450 | Msa0974950 | 0.834759 | 2.488359e-56 | -8.615850e-47 |
| Msa0672450 | Msa0994370 | 0.815295 | 9.948887e-52 | -8.615850e-47 |
| Msa0672450 | Msa1001390 | 0.815730 | 7.958960e-52 | -8.615850e-47 |
| Msa0672450 | Msa1007230 | 0.804611 | 1.988426e-49 | -8.615850e-47 |
| Msa0672450 | Msa1011090 | 0.811662 | 6.257518e-51 | -8.615850e-47 |
| Msa0672450 | Msa1026940 | 0.827496 | 1.515211e-54 | -8.615850e-47 |
| Msa0672450 | Msa1029050 | 0.802956 | 4.386546e-49 | -8.615850e-47 |
| Msa0672450 | Msa1034270 | 0.820432 | 6.881973e-53 | -8.615850e-47 |
| Msa0672450 | Msa1034280 | 0.822239 | 2.634431e-53 | -8.615850e-47 |
| Msa0672450 | Msa1034290 | 0.818960 | 1.492152e-52 | -8.615850e-47 |
| Msa0672450 | Msa1034500 | 0.807041 | 6.135332e-50 | -8.615850e-47 |
| Msa0672450 | Msa1036610 | 0.808134 | 3.595949e-50 | -8.615850e-47 |
| Msa0672450 | Msa1037420 | 0.800337 | 1.511027e-48 | -8.615850e-47 |
| Msa0672450 | Msa1042660 | 0.802640 | 5.096155e-49 | -8.615850e-47 |
| Msa0672450 | Msa1051210 | 0.805156 | 1.529631e-49 | -8.615850e-47 |
| Msa0672450 | Msa1052330 | 0.802584 | 5.234508e-49 | -8.615850e-47 |
| Msa0672450 | Msa1063420 | 0.827335 | 1.656417e-54 | -8.615850e-47 |
| Msa0672450 | Msa1064250 | 0.847276 | 1.281125e-59 | -8.615850e-47 |
| Msa0672450 | Msa1071320 | 0.806727 | 7.146706e-50 | -8.615850e-47 |
| Msa0672450 | Msa1076960 | 0.819915 | 9.036588e-53 | -8.615850e-47 |
| Msa0672450 | Msa1089320 | 0.809607 | 1.740095e-50 | -8.615850e-47 |
| Msa0672450 | Msa1089450 | 0.803650 | 3.149977e-49 | -8.615850e-47 |
| Msa0672450 | Msa1091940 | 0.800417 | 1.455706e-48 | -8.615850e-47 |
| Msa0672450 | Msa1100930 | 0.809071 | 2.268406e-50 | -8.615850e-47 |
| Msa0672450 | Msa1104560 | 0.805380 | 1.372774e-49 | -8.615850e-47 |
| Msa0672450 | Msa1107190 | 0.801483 | 8.813227e-49 | -8.615850e-47 |
| Msa0672450 | Msa1109090 | 0.814808 | 1.275567e-51 | -8.615850e-47 |
| Msa0672450 | Msa1109680 | 0.819551 | 1.094380e-52 | -8.615850e-47 |
| Msa0672450 | Msa1111870 | 0.840393 | 8.932770e-58 | -8.615850e-47 |
| Msa0672450 | Msa1121110 | 0.801313 | 9.549865e-49 | -8.615850e-47 |
| Msa0672450 | Msa1122860 | 0.810924 | 9.050267e-51 | -8.615850e-47 |
| Msa0672450 | Msa1133230 | 0.808531 | 2.958362e-50 | -8.615850e-47 |
| Msa0672450 | Msa1137570 | 0.805332 | 1.404730e-49 | -8.615850e-47 |
| Msa0672450 | Msa1143020 | 0.821811 | 3.310262e-53 | -8.615850e-47 |
| Msa0672450 | Msa1144040 | 0.801056 | 1.078148e-48 | -8.615850e-47 |
| Msa0672450 | Msa1162780 | 0.830877 | 2.293160e-55 | -8.615850e-47 |
| Msa0672450 | Msa1167010 | 0.806717 | 7.183956e-50 | -8.615850e-47 |
| Msa0672450 | Msa1167340 | 0.805821 | 1.109377e-49 | -8.615850e-47 |
| Msa0672450 | Msa1175200 | 0.804874 | 1.751755e-49 | -8.615850e-47 |
| Msa0672450 | Msa1176710 | 0.804008 | 2.654300e-49 | -8.615850e-47 |
| Msa0672450 | Msa1176720 | 0.801764 | 7.719664e-49 | -8.615850e-47 |
| Msa0672450 | Msa1180500 | 0.824819 | 6.565679e-54 | -8.615850e-47 |
| Msa0672450 | Msa1181250 | 0.823307 | 1.486149e-53 | -8.615850e-47 |
| Msa0672450 | Msa1181330 | 0.828699 | 7.777073e-55 | -8.615850e-47 |
| Msa0672450 | Msa1181910 | 0.811863 | 5.660022e-51 | -8.615850e-47 |
| Msa0672450 | Msa1185110 | 0.815199 | 1.044575e-51 | -8.615850e-47 |
| Msa0672450 | Msa1221330 | 0.806584 | 7.663214e-50 | -8.615850e-47 |
| Msa0672450 | Msa1225100 | 0.827042 | 1.945947e-54 | -8.615850e-47 |
| Msa0672450 | Msa1231840 | 0.839301 | 1.719753e-57 | -8.615850e-47 |
| Msa0672450 | Msa1232740 | 0.829193 | 5.904355e-55 | -8.615850e-47 |
| Msa0672450 | Msa1237980 | 0.804290 | 2.319190e-49 | -8.615850e-47 |
| Msa0672450 | Msa1243870 | 0.803112 | 4.071532e-49 | -8.615850e-47 |
| Msa0672450 | Msa1246360 | 0.845905 | 3.034442e-59 | -8.615850e-47 |
| Msa0672450 | Msa1254730 | 0.803312 | 3.702405e-49 | -8.615850e-47 |
| Msa0672450 | Msa1265590 | 0.803235 | 3.840814e-49 | -8.615850e-47 |
| Msa0672450 | Msa1270660 | 0.835328 | 1.789342e-56 | -8.615850e-47 |
| Msa0672450 | Msa1270730 | 0.814107 | 1.823012e-51 | -8.615850e-47 |
| Msa0672450 | Msa1274560 | 0.801453 | 8.940516e-49 | -8.615850e-47 |
| Msa0672450 | Msa1277660 | 0.807205 | 5.664012e-50 | -8.615850e-47 |
| Msa0672450 | Msa1280150 | 0.823258 | 1.525713e-53 | -8.615850e-47 |
| Msa0672450 | Msa1287460 | 0.823135 | 1.630448e-53 | -8.615850e-47 |
| Msa0672450 | Msa1295330 | 0.803694 | 3.084119e-49 | -8.615850e-47 |
| Msa0672450 | Msa1305810 | 0.822104 | 2.830969e-53 | -8.615850e-47 |
| Msa0672450 | Msa1307180 | 0.802590 | 5.220409e-49 | -8.615850e-47 |
| Msa0672450 | Msa1312520 | 0.833131 | 6.361788e-56 | -8.615850e-47 |
| Msa0672450 | Msa1313320 | 0.834938 | 2.244284e-56 | -8.615850e-47 |
| Msa0672450 | Msa1316360 | 0.808114 | 3.631320e-50 | -8.615850e-47 |
| Msa0672450 | Msa1329870 | 0.823822 | 1.126348e-53 | -8.615850e-47 |
| Msa0672450 | Msa1332050 | 0.814007 | 1.918319e-51 | -8.615850e-47 |
| Msa0672450 | Msa1348760 | 0.811636 | 6.341985e-51 | -8.615850e-47 |
| Msa0672450 | Msa1355890 | 0.818038 | 2.414432e-52 | -8.615850e-47 |
| Msa0672450 | Msa1358670 | 0.804100 | 2.540775e-49 | -8.615850e-47 |
| Msa0672450 | Msa1364210 | 0.810417 | 1.164723e-50 | -8.615850e-47 |
| Msa0672450 | Msa1371940 | 0.807769 | 4.299169e-50 | -8.615850e-47 |
| Msa0672450 | Msa1372150 | 0.810371 | 1.191913e-50 | -8.615850e-47 |
| Msa0672450 | Msa1372280 | 0.811057 | 8.468929e-51 | -8.615850e-47 |
| Msa0672450 | Msa1381480 | 0.827301 | 1.687510e-54 | -8.615850e-47 |
| Msa0672450 | Msa1382790 | 0.812872 | 3.407243e-51 | -8.615850e-47 |
| Msa0672450 | Msa1390680 | 0.809692 | 1.668450e-50 | -8.615850e-47 |
| Msa0672450 | Msa1390700 | 0.820534 | 6.521144e-53 | -8.615850e-47 |
| Msa0672450 | Msa1392890 | 0.808793 | 2.600914e-50 | -8.615850e-47 |
| Msa0672450 | Msa1392910 | 0.809364 | 1.962312e-50 | -8.615850e-47 |
| Msa0672450 | Msa1394310 | 0.811646 | 6.308157e-51 | -8.615850e-47 |
| Msa0672450 | Msa1405220 | 0.820088 | 8.249801e-53 | -8.615850e-47 |
| Msa0672450 | Msa1412640 | 0.804782 | 1.831141e-49 | -8.615850e-47 |
| Msa0672450 | Msa1416370 | 0.833309 | 5.742694e-56 | -8.615850e-47 |
| Msa0672450 | Msa1420270 | 0.821797 | 3.336175e-53 | -8.615850e-47 |
| Msa0672450 | Msa1428780 | 0.808455 | 3.070686e-50 | -8.615850e-47 |
| Msa0672450 | Msa1437270 | 0.828120 | 1.072900e-54 | -8.615850e-47 |
| Msa0672450 | Msa1449340 | -0.807977 | 3.883935e-50 | -8.615850e-47 |
| Msa0672450 | Msa1454450 | 0.810428 | 1.158434e-50 | -8.615850e-47 |
| Msa0672450 | Msa1457160 | 0.827400 | 1.597860e-54 | -8.615850e-47 |
| Msa0672450 | Msa1462360 | 0.823741 | 1.176330e-53 | -8.615850e-47 |
| Msa0672450 | Msa1466540 | 0.810283 | 1.244847e-50 | -8.615850e-47 |
| Msa0138020 | Msa0672450 | 0.802517 | 5.402408e-49 | -8.615850e-47 |
| Msa0140500 | Msa0672450 | -0.801679 | 8.037100e-49 | -8.615850e-47 |
| Msa0154920 | Msa0672450 | 0.828660 | 7.946306e-55 | -8.615850e-47 |
| Msa0160960 | Msa0672450 | 0.806723 | 7.161130e-50 | -8.615850e-47 |
| Msa0171280 | Msa0672450 | 0.800956 | 1.129691e-48 | -8.615850e-47 |
| Msa0171540 | Msa0672450 | 0.809347 | 1.979337e-50 | -8.615850e-47 |
| Msa0178510 | Msa0672450 | 0.807246 | 5.551125e-50 | -8.615850e-47 |
| Msa0180500 | Msa0672450 | 0.816193 | 6.272733e-52 | -8.615850e-47 |
| Msa0183760 | Msa0672450 | 0.802961 | 4.375700e-49 | -8.615850e-47 |
| Msa0183850 | Msa0672450 | 0.834243 | 3.355612e-56 | -8.615850e-47 |
| Msa0189040 | Msa0672450 | 0.805305 | 1.423208e-49 | -8.615850e-47 |
| Msa0190310 | Msa0672450 | 0.804649 | 1.951908e-49 | -8.615850e-47 |
| Msa0190530 | Msa0672450 | 0.807401 | 5.146204e-50 | -8.615850e-47 |
| Msa0207350 | Msa0672450 | 0.812295 | 4.555872e-51 | -8.615850e-47 |
| Msa0217700 | Msa0672450 | 0.821750 | 3.419358e-53 | -8.615850e-47 |
| Msa0220730 | Msa0672450 | 0.802016 | 6.851616e-49 | -8.615850e-47 |
| Msa0365860 | Msa0672450 | 0.803000 | 4.295624e-49 | -8.615850e-47 |
| Msa0371950 | Msa0672450 | 0.814951 | 1.186114e-51 | -8.615850e-47 |
| Msa0381610 | Msa0672450 | -0.810051 | 1.396912e-50 | -8.615850e-47 |
| Msa0382370 | Msa0672450 | 0.804369 | 2.233070e-49 | -8.615850e-47 |
| Msa0389210 | Msa0672450 | 0.815704 | 8.064170e-52 | -8.615850e-47 |
| Msa0393620 | Msa0672450 | 0.810513 | 1.110660e-50 | -8.615850e-47 |
| Msa0394470 | Msa0672450 | 0.805832 | 1.103497e-49 | -8.615850e-47 |
| Msa0398200 | Msa0672450 | 0.800686 | 1.282645e-48 | -8.615850e-47 |
| Msa0410860 | Msa0672450 | 0.812228 | 4.711604e-51 | -8.615850e-47 |
| Msa0411430 | Msa0672450 | 0.805480 | 1.308057e-49 | -8.615850e-47 |
| Msa0417330 | Msa0672450 | 0.801445 | 8.976244e-49 | -8.615850e-47 |
| Msa0422180 | Msa0672450 | 0.818856 | 1.575857e-52 | -8.615850e-47 |
| Msa0432160 | Msa0672450 | 0.804814 | 1.803469e-49 | -8.615850e-47 |
| Msa0434180 | Msa0672450 | 0.824425 | 8.129017e-54 | -8.615850e-47 |
| Msa0435690 | Msa0672450 | 0.808539 | 2.946667e-50 | -8.615850e-47 |
| Msa0450400 | Msa0672450 | -0.806994 | 6.276893e-50 | -8.615850e-47 |
| Msa0450480 | Msa0672450 | 0.820319 | 7.304677e-53 | -8.615850e-47 |
| Msa0468320 | Msa0672450 | 0.809646 | 1.707377e-50 | -8.615850e-47 |
| Msa0476680 | Msa0672450 | 0.809425 | 1.904623e-50 | -8.615850e-47 |
| Msa0481280 | Msa0672450 | 0.811358 | 7.286644e-51 | -8.615850e-47 |
| Msa0481970 | Msa0672450 | 0.815804 | 7.661557e-52 | -8.615850e-47 |
| Msa0240270 | Msa0672450 | 0.800144 | 1.653942e-48 | -8.615850e-47 |
| Msa0241140 | Msa0672450 | 0.822179 | 2.720159e-53 | -8.615850e-47 |
| Msa0244140 | Msa0672450 | 0.804428 | 2.170928e-49 | -8.615850e-47 |
| Msa0259210 | Msa0672450 | 0.824248 | 8.946345e-54 | -8.615850e-47 |
| Msa0259230 | Msa0672450 | 0.802845 | 4.623185e-49 | -8.615850e-47 |
| Msa0267370 | Msa0672450 | 0.808677 | 2.753862e-50 | -8.615850e-47 |
| Msa0271770 | Msa0672450 | 0.817062 | 4.007117e-52 | -8.615850e-47 |
| Msa0278190 | Msa0672450 | 0.809524 | 1.813155e-50 | -8.615850e-47 |
| Msa0295460 | Msa0672450 | -0.823078 | 1.680992e-53 | -8.615850e-47 |
| Msa0296820 | Msa0672450 | 0.838963 | 2.104299e-57 | -8.615850e-47 |
| Msa0296980 | Msa0672450 | -0.809397 | 1.930500e-50 | -8.615850e-47 |
| Msa0305410 | Msa0672450 | 0.822660 | 2.103618e-53 | -8.615850e-47 |
| Msa0317970 | Msa0672450 | 0.831248 | 1.858933e-55 | -8.615850e-47 |
| Msa0336300 | Msa0672450 | 0.807719 | 4.405000e-50 | -8.615850e-47 |
| Msa0336320 | Msa0672450 | 0.825668 | 4.133600e-54 | -8.615850e-47 |
| Msa0342750 | Msa0672450 | 0.805035 | 1.621550e-49 | -8.615850e-47 |
| Msa0347750 | Msa0672450 | 0.818547 | 1.851931e-52 | -8.615850e-47 |
| Msa0357760 | Msa0672450 | 0.806752 | 7.061539e-50 | -8.615850e-47 |
| Msa0357790 | Msa0672450 | 0.809347 | 1.979367e-50 | -8.615850e-47 |
| Msa0357830 | Msa0672450 | 0.825105 | 5.619219e-54 | -8.615850e-47 |
| Msa0357840 | Msa0672450 | 0.817354 | 3.443475e-52 | -8.615850e-47 |
| Msa0357870 | Msa0672450 | 0.805439 | 1.334332e-49 | -8.615850e-47 |
| Msa0357900 | Msa0672450 | 0.817739 | 2.821342e-52 | -8.615850e-47 |
| Msa0510930 | Msa0672450 | 0.834122 | 3.597012e-56 | -8.615850e-47 |
| Msa0517090 | Msa0672450 | 0.807783 | 4.270462e-50 | -8.615850e-47 |
| Msa0518380 | Msa0672450 | 0.800522 | 1.385648e-48 | -8.615850e-47 |
| Msa0521010 | Msa0672450 | 0.816071 | 6.681659e-52 | -8.615850e-47 |
| Msa0521670 | Msa0672450 | 0.839796 | 1.278909e-57 | -8.615850e-47 |
| Msa0521740 | Msa0672450 | 0.801335 | 9.453740e-49 | -8.615850e-47 |
| Msa0530400 | Msa0672450 | 0.805174 | 1.516405e-49 | -8.615850e-47 |
| Msa0532960 | Msa0672450 | 0.821029 | 5.015683e-53 | -8.615850e-47 |
| Msa0532990 | Msa0672450 | 0.806201 | 9.229877e-50 | -8.615850e-47 |
| Msa0545700 | Msa0672450 | 0.805044 | 1.614320e-49 | -8.615850e-47 |
| Msa0548920 | Msa0672450 | 0.954151 | 5.630025e-112 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672450 | MtrunA17_Chr4g0019771 | 96.190 | 210 | 8 | 0 | 1 | 210 | 1 | 210 | 4.40e-146 | 405 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0672450 | AT1G61415.1 | 50.617 | 162 | 77 | 1 | 1 | 162 | 1 | 159 | 2.10e-45 | 149 |
| Msa0672450 | AT1G61415.2 | 46.897 | 145 | 74 | 1 | 18 | 162 | 1 | 142 | 1.34e-35 | 123 |
| Msa0672450 | AT1G61450.1 | 49.515 | 103 | 52 | 0 | 1 | 103 | 1 | 103 | 2.64e-26 | 98.6 |
Find 31 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTAATTAATTACCAAATT+TGG | 0.132371 | 4_4:+17392077 | None:intergenic |
| TCCATATTATAGCTGGTTTC+AGG | 0.147934 | 4_4:-17393623 | Msa0672450:intron |
| TTTGTCAACTTTGCCAAATT+TGG | 0.218122 | 4_4:-17392090 | Msa0672450:three_prime_UTR |
| TGAAAATGAAATTCAACTTT+TGG | 0.242525 | 4_4:-17392523 | Msa0672450:CDS |
| CAATTTCTCTTTGAAATTCT+AGG | 0.264996 | 4_4:+17392598 | None:intergenic |
| TAATTCATAGTTCTGAAGTA+TGG | 0.316488 | 4_4:-17392113 | Msa0672450:three_prime_UTR |
| CTCTTCGCATTTGACGATGC+TGG | 0.383965 | 4_4:+17396881 | None:intergenic |
| CTGAGATCCAGAGCAAGAAC+TGG | 0.388299 | 4_4:-17392242 | Msa0672450:CDS |
| CATTCTCCCAGTTCTTGCTC+TGG | 0.401003 | 4_4:+17392235 | None:intergenic |
| AGAAATCGAAGCTCATATTC+AGG | 0.409384 | 4_4:-17396922 | Msa0672450:CDS |
| CCATATTATAGCTGGTTTCA+GGG | 0.419672 | 4_4:-17393622 | Msa0672450:intron |
| AATTTGGTAATTAATTAAGA+TGG | 0.456259 | 4_4:-17392074 | Msa0672450:three_prime_UTR |
| TTGTAAAGTGAGGACTTTGT+TGG | 0.483498 | 4_4:-17392562 | Msa0672450:CDS |
| CAGGGAATCAGTGAGTACTT+TGG | 0.487807 | 4_4:-17393604 | Msa0672450:CDS |
| CTCTCACATTTCATCTCTCA+AGG | 0.488977 | 4_4:-17397060 | Msa0672450:CDS |
| TCTCAAGGAAATGCTCGATC+AGG | 0.500609 | 4_4:-17397045 | Msa0672450:intron |
| AACACAACAATGGAAGATTC+AGG | 0.502293 | 4_4:-17397092 | Msa0672450:exon |
| TTCTGATGAAGTAGTAAGAA+TGG | 0.507235 | 4_4:-17391989 | Msa0672450:three_prime_UTR |
| GGACGATATGGTTAACAGAA+TGG | 0.534903 | 4_4:-17393550 | Msa0672450:CDS |
| GTTGGATTTGTAACTGTCGC+TGG | 0.536155 | 4_4:-17396789 | Msa0672450:intron |
| CATCGTCAAATGCGAAGAGA+TGG | 0.541364 | 4_4:-17396877 | Msa0672450:CDS |
| GATCTTCATAATTCAAACTC+AGG | 0.543274 | 4_4:-17392441 | Msa0672450:intron |
| GTTCTGCAGTTCGACACTGT+TGG | 0.572283 | 4_4:-17396807 | Msa0672450:CDS |
| ATCAGTGAGTACTTTGGAGA+AGG | 0.572875 | 4_4:-17393598 | Msa0672450:CDS |
| ACTAAGGAAGCTGAATTGAT+CGG | 0.587240 | 4_4:-17396840 | Msa0672450:CDS |
| TGAGATCCAGAGCAAGAACT+GGG | 0.592261 | 4_4:-17392241 | Msa0672450:CDS |
| GCTGAATTGATCGGAATCTG+TGG | 0.601646 | 4_4:-17396831 | Msa0672450:CDS |
| ATAGAGAAAATTGTAAAGTG+AGG | 0.634744 | 4_4:-17392572 | Msa0672450:CDS |
| AGCTCATATTCAGGTCACAC+GGG | 0.635748 | 4_4:-17396913 | Msa0672450:CDS |
| AAGCTCATATTCAGGTCACA+CGG | 0.669931 | 4_4:-17396914 | Msa0672450:CDS |
| GTAACAGAACAACACAACAA+TGG | 0.713754 | 4_4:-17397102 | Msa0672450:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTTTAAATCAGAAATT+TGG | + | chr4_4:17392470-17392489 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTTTAATGGT+TGG | - | chr4_4:17392896-17392915 | Msa0672450:intron | 10.0% |
| !!! | TTTTTTTTTTTTTAATGGTT+GGG | - | chr4_4:17392897-17392916 | Msa0672450:intron | 10.0% |
| !! | ATCAATAAATATATTAAAGA+AGG | + | chr4_4:17395080-17395099 | None:intergenic | 10.0% |
| !! | TTATTTAACAATTAATTGTT+CGG | - | chr4_4:17395394-17395413 | Msa0672450:intron | 10.0% |
| !! | TATATATTAGTAGAAAAATA+TGG | + | chr4_4:17395991-17396010 | None:intergenic | 10.0% |
| !! | TTCATTATTATTGATCAATT+AGG | - | chr4_4:17392136-17392155 | Msa0672450:three_prime_UTR | 15.0% |
| !! | TAGATATTATCTAATTGAAA+CGG | - | chr4_4:17392699-17392718 | Msa0672450:intron | 15.0% |
| !! | CATTAAAAAAAAAAAAAACC+TGG | + | chr4_4:17392894-17392913 | None:intergenic | 15.0% |
| !!! | CAGGTTTTTTTTTTTTTTAA+TGG | - | chr4_4:17392892-17392911 | Msa0672450:intron | 15.0% |
| !!! | TGACTTTAAAAAAATGTAAT+TGG | - | chr4_4:17393466-17393485 | Msa0672450:intron | 15.0% |
| !!! | ACTTTAATCTTTTTTATATC+TGG | - | chr4_4:17395135-17395154 | Msa0672450:intron | 15.0% |
| !! | TGAAGAAATATAAATATAAC+AGG | + | chr4_4:17395180-17395199 | None:intergenic | 15.0% |
| !! | TAAAAACTAAAAAGAATTCA+CGG | + | chr4_4:17395339-17395358 | None:intergenic | 15.0% |
| !! | AGTACTATCATTATTATATT+TGG | + | chr4_4:17395905-17395924 | None:intergenic | 15.0% |
| !! | TACTAATATATAAAGACAAA+TGG | - | chr4_4:17395999-17396018 | Msa0672450:intron | 15.0% |
| !!! | ATATATTTACGTTTGTTTTA+TGG | + | chr4_4:17396241-17396260 | None:intergenic | 15.0% |
| !!! | TTTTTCTATTCAAATAGAAA+AGG | - | chr4_4:17396294-17396313 | Msa0672450:intron | 15.0% |
| !! | ATTGAAATGATACATAATTA+AGG | + | chr4_4:17396406-17396425 | None:intergenic | 15.0% |
| !!! | ATTAACTTTTGTTTAAAGAA+AGG | + | chr4_4:17396959-17396978 | None:intergenic | 15.0% |
| !! | TCTTAATTAATTACCAAATT+TGG | + | chr4_4:17397014-17397033 | None:intergenic | 15.0% |
| !!! | AATTTGGTAATTAATTAAGA+TGG | - | chr4_4:17397014-17397033 | Msa0672450:intron | 15.0% |
| !! | TTGCTTATTTATAAATAGCT+TGG | - | chr4_4:17392763-17392782 | Msa0672450:intron | 20.0% |
| !!! | TTGTTTTTCTCAAAAAAAAG+AGG | + | chr4_4:17393035-17393054 | None:intergenic | 20.0% |
| !! | TGCTATTAATTCTCATAAAA+GGG | + | chr4_4:17393059-17393078 | None:intergenic | 20.0% |
| !! | ATGCTATTAATTCTCATAAA+AGG | + | chr4_4:17393060-17393079 | None:intergenic | 20.0% |
| !!! | ATAGTTATTAAGTTTTATCC+CGG | - | chr4_4:17393160-17393179 | Msa0672450:intron | 20.0% |
| !!! | AGCGTTGTAATTTTTTTTTT+TGG | - | chr4_4:17393210-17393229 | Msa0672450:intron | 20.0% |
| !!! | AAATAGTATTTGCAACTTTT+TGG | - | chr4_4:17393491-17393510 | Msa0672450:intron | 20.0% |
| !! | AAATTTGGATTGTTATATCA+AGG | - | chr4_4:17393583-17393602 | Msa0672450:CDS | 20.0% |
| !! | TGTATATCTTATGTAGAAAT+AGG | - | chr4_4:17394017-17394036 | Msa0672450:intron | 20.0% |
| !!! | AAATAGTATTTGCAACTTTT+TGG | - | chr4_4:17393491-17393510 | Msa0672450:intron | 20.0% |
| !! | AAATTTGGATTGTTATATCA+AGG | - | chr4_4:17393583-17393602 | Msa0672450:CDS | 20.0% |
| !! | AAGAAAATCAAAAACAAAGT+GGG | + | chr4_4:17394606-17394625 | None:intergenic | 20.0% |
| !! | TTGTACCAAAAAAAAATTAC+CGG | - | chr4_4:17394730-17394749 | Msa0672450:intron | 20.0% |
| !!! | TATTACCGGTAATTTTTTTT+TGG | + | chr4_4:17394738-17394757 | None:intergenic | 20.0% |
| !! | TGTATATCTTATGTAGAAAT+AGG | - | chr4_4:17394017-17394036 | Msa0672450:intron | 20.0% |
| !! | AATGGACATTAAATTAACAT+AGG | - | chr4_4:17395028-17395047 | Msa0672450:intron | 20.0% |
| !! | AATATATTAAAGAAGGAAAC+AGG | + | chr4_4:17395073-17395092 | None:intergenic | 20.0% |
| !! | AAAGATTAAAGTAAAGCATA+TGG | + | chr4_4:17395127-17395146 | None:intergenic | 20.0% |
| !!! | TTAAATTTGAAATCAGCATA+TGG | - | chr4_4:17395247-17395266 | Msa0672450:intron | 20.0% |
| !!! | TTTTTATACTGTTTTGCTTA+TGG | - | chr4_4:17395423-17395442 | Msa0672450:intron | 20.0% |
| !!! | TTTTATACTGTTTTGCTTAT+GGG | - | chr4_4:17395424-17395443 | Msa0672450:intron | 20.0% |
| !!! | TCCATTTTTAACTTTTTGTT+TGG | - | chr4_4:17395700-17395719 | Msa0672450:intron | 20.0% |
| !! | ATAAATTCATATATCTGAGT+TGG | + | chr4_4:17396355-17396374 | None:intergenic | 20.0% |
| !!! | TGAAAATGAAATTCAACTTT+TGG | - | chr4_4:17396565-17396584 | Msa0672450:intron | 20.0% |
| !!! | GAATTGTGTTTTGAAAAATT+CGG | - | chr4_4:17396595-17396614 | Msa0672450:intron | 20.0% |
| !! | TATACATGTTAATCCTTATT+TGG | + | chr4_4:17396750-17396769 | None:intergenic | 20.0% |
| ! | ATTATCTAATTGAAACGGAA+TGG | - | chr4_4:17392704-17392723 | Msa0672450:intron | 25.0% |
| ! | TGTTAAACCAACAATTTGAT+CGG | - | chr4_4:17392732-17392751 | Msa0672450:intron | 25.0% |
| !!! | TTTTTTTTAATGGTTGGGTA+CGG | - | chr4_4:17392902-17392921 | Msa0672450:intron | 25.0% |
| ! | AAATTGAAAAACTAAAGTCC+GGG | + | chr4_4:17393181-17393200 | None:intergenic | 25.0% |
| ! | CAAATTGAAAAACTAAAGTC+CGG | + | chr4_4:17393182-17393201 | None:intergenic | 25.0% |
| !!! | TTTTTCAAAAAACAAGGGTA+CGG | + | chr4_4:17393323-17393342 | None:intergenic | 25.0% |
| !!! | TTGCATGAAAATTTGGTTTT+TGG | - | chr4_4:17393708-17393727 | Msa0672450:intron | 25.0% |
| ! | AAGAAAACCAAAAACAAAGT+GGG | + | chr4_4:17393814-17393833 | None:intergenic | 25.0% |
| ! | TTTGATAAAGGAAATCACTT+AGG | + | chr4_4:17393955-17393974 | None:intergenic | 25.0% |
| ! | TAAGTGATTTCCTTTATCAA+AGG | - | chr4_4:17393954-17393973 | Msa0672450:intron | 25.0% |
| ! | ATATACATTCTCTACTGTAA+CGG | + | chr4_4:17394004-17394023 | None:intergenic | 25.0% |
| ! | CTTCATAGATATTATCTGAA+TGG | - | chr4_4:17394073-17394092 | Msa0672450:intron | 25.0% |
| ! | TAGATATTATCTGAATGGAA+CGG | - | chr4_4:17394078-17394097 | Msa0672450:intron | 25.0% |
| ! | TGTTAAACCAACAATTTGAT+CGG | - | chr4_4:17392732-17392751 | Msa0672450:intron | 25.0% |
| !! | TCCTTTTGTGTTAATACATT+AGG | - | chr4_4:17394157-17394176 | Msa0672450:intron | 25.0% |
| ! | ACCTAATGTATTAACACAAA+AGG | + | chr4_4:17394161-17394180 | None:intergenic | 25.0% |
| !!! | TTGCTTATTTTTAAATAGCG+CGG | - | chr4_4:17394189-17394208 | Msa0672450:intron | 25.0% |
| !!! | ACAGGAGTTTTATAGAAAAA+AGG | - | chr4_4:17394341-17394360 | Msa0672450:intron | 25.0% |
| ! | AAAGGTTGTTTACTGAAATT+TGG | - | chr4_4:17394359-17394378 | Msa0672450:intron | 25.0% |
| ! | AATTATTCTCTGTAATATCG+TGG | - | chr4_4:17394436-17394455 | Msa0672450:intron | 25.0% |
| ! | AGAAAATCAAAAACAAAGTG+GGG | + | chr4_4:17394605-17394624 | None:intergenic | 25.0% |
| ! | CAAGAAAATCAAAAACAAAG+TGG | + | chr4_4:17394607-17394626 | None:intergenic | 25.0% |
| !!! | CACTTTGTTTTTGATTTTCT+TGG | - | chr4_4:17394605-17394624 | Msa0672450:intron | 25.0% |
| ! | TAAGTGATTTCCTTTATGAA+AGG | - | chr4_4:17394789-17394808 | Msa0672450:intron | 25.0% |
| ! | AAATAGGAGAACACAAAAAA+TGG | - | chr4_4:17394868-17394887 | Msa0672450:intron | 25.0% |
| ! | GACATTAAATTAACATAGGA+AGG | - | chr4_4:17395032-17395051 | Msa0672450:intron | 25.0% |
| ! | AAAGTAAAGCATATGGTTAT+TGG | + | chr4_4:17395120-17395139 | None:intergenic | 25.0% |
| !!! | ATTTTGACAAATAACCAACT+TGG | - | chr4_4:17395202-17395221 | Msa0672450:intron | 25.0% |
| !!! | TTTTTTCTCCATATTATAGC+TGG | - | chr4_4:17395458-17395477 | Msa0672450:intron | 25.0% |
| ! | TTAACAGAATGGATGAAAAA+CGG | - | chr4_4:17395549-17395568 | Msa0672450:intron | 25.0% |
| !!! | AACTGCTGGAATTATTTTTT+GGG | - | chr4_4:17395633-17395652 | Msa0672450:intron | 25.0% |
| !!! | TTATTTTCTTTAGAGATTGC+TGG | + | chr4_4:17395661-17395680 | None:intergenic | 25.0% |
| ! | GCCAAACAAAAAGTTAAAAA+TGG | + | chr4_4:17395704-17395723 | None:intergenic | 25.0% |
| ! | ACATAAATGCATACTACATA+TGG | + | chr4_4:17395737-17395756 | None:intergenic | 25.0% |
| ! | TGTAGTATGCATTTATGTTA+TGG | - | chr4_4:17395739-17395758 | Msa0672450:intron | 25.0% |
| ! | TATTATATTTGGCCAACTTT+AGG | + | chr4_4:17395894-17395913 | None:intergenic | 25.0% |
| ! | TCAAATGTCTCACATAATAT+TGG | - | chr4_4:17396146-17396165 | Msa0672450:intron | 25.0% |
| ! | AATCAATTGGTCATCAAATT+AGG | + | chr4_4:17396436-17396455 | None:intergenic | 25.0% |
| !!! | CAATTTCTCTTTGAAATTCT+AGG | + | chr4_4:17396493-17396512 | None:intergenic | 25.0% |
| ! | ATAGAGAAAATTGTAAAGTG+AGG | - | chr4_4:17396516-17396535 | Msa0672450:intron | 25.0% |
| !!! | TGTTTTGAAAAATTCGGTTT+TGG | - | chr4_4:17396601-17396620 | Msa0672450:intron | 25.0% |
| ! | GGTAATAATCTATGTATACA+AGG | - | chr4_4:17396668-17396687 | Msa0672450:intron | 25.0% |
| !! | ATGTTAATCCTTATTTGGTT+TGG | + | chr4_4:17396745-17396764 | None:intergenic | 25.0% |
| !!! | TAATTCATAGTTCTGAAGTA+TGG | - | chr4_4:17396975-17396994 | Msa0672450:intron | 25.0% |
| TGATTGAAGATTGAATGAAG+AGG | + | chr4_4:17392106-17392125 | None:intergenic | 30.0% | |
| ! | AGCAATATTAGATTAGTTCG+AGG | - | chr4_4:17392408-17392427 | Msa0672450:intron | 30.0% |
| GAATAAACCGATCAAATTGT+TGG | + | chr4_4:17392742-17392761 | None:intergenic | 30.0% | |
| !!! | GTACGTTTATCCTCTTTTTT+TGG | - | chr4_4:17392952-17392971 | Msa0672450:intron | 30.0% |
| !!! | TCCTCTTTTTTTGGAGAAAA+TGG | - | chr4_4:17392961-17392980 | Msa0672450:intron | 30.0% |
| ! | TCCATTTTCTCCAAAAAAAG+AGG | + | chr4_4:17392965-17392984 | None:intergenic | 30.0% |
| !! | TAGTCATTTTACTGAAGATG+AGG | - | chr4_4:17393086-17393105 | Msa0672450:intron | 30.0% |
| CTTAATAACTATGCATGAGT+AGG | + | chr4_4:17393152-17393171 | None:intergenic | 30.0% | |
| !!! | CGGACTTTAGTTTTTCAATT+TGG | - | chr4_4:17393180-17393199 | Msa0672450:intron | 30.0% |
| !! | TTTTCAAAAAACAAGGGTAC+GGG | + | chr4_4:17393322-17393341 | None:intergenic | 30.0% |
| !! | CGGCATTTTTCAAAAAACAA+GGG | + | chr4_4:17393328-17393347 | None:intergenic | 30.0% |
| !! | ACGGCATTTTTCAAAAAACA+AGG | + | chr4_4:17393329-17393348 | None:intergenic | 30.0% |
| !! | AGTTTTTGTTTAAGCATGAC+AGG | - | chr4_4:17393532-17393551 | Msa0672450:intron | 30.0% |
| !! | GTTTTTGTTTAAGCATGACA+GGG | - | chr4_4:17393533-17393552 | Msa0672450:intron | 30.0% |
| ! | ACAGGGTTTTTATAGAAGAA+AGG | - | chr4_4:17393550-17393569 | Msa0672450:CDS | 30.0% |
| AAAGGCTGTTAACTGAAATT+TGG | - | chr4_4:17393568-17393587 | Msa0672450:CDS | 30.0% | |
| ! | GGTTTTTGATGTCTTTATGA+TGG | - | chr4_4:17393604-17393623 | Msa0672450:CDS | 30.0% |
| AATTATTCTCTGTAGTATCG+TGG | - | chr4_4:17393645-17393664 | Msa0672450:intron | 30.0% | |
| ! | AATTTTCATGCAATTCTCTG+AGG | + | chr4_4:17393701-17393720 | None:intergenic | 30.0% |
| CAGAGAATTGCATGAAAATT+TGG | - | chr4_4:17393701-17393720 | Msa0672450:intron | 30.0% | |
| AGAATTTGTGCAATTTGACT+TGG | + | chr4_4:17393744-17393763 | None:intergenic | 30.0% | |
| AGAAAACCAAAAACAAAGTG+GGG | + | chr4_4:17393813-17393832 | None:intergenic | 30.0% | |
| CAAGAAAACCAAAAACAAAG+TGG | + | chr4_4:17393815-17393834 | None:intergenic | 30.0% | |
| !!! | CACTTTGTTTTTGGTTTTCT+TGG | - | chr4_4:17393813-17393832 | Msa0672450:intron | 30.0% |
| TACTGCACATATATAACTGT+TGG | + | chr4_4:17393872-17393891 | None:intergenic | 30.0% | |
| ! | CTAAAGGCATGCTATATTAA+AGG | - | chr4_4:17393920-17393939 | Msa0672450:intron | 30.0% |
| ! | TCTTCTTTTGCCTTTGATAA+AGG | + | chr4_4:17393967-17393986 | None:intergenic | 30.0% |
| TAGGAGAACACACAAAAAAT+AGG | - | chr4_4:17394036-17394055 | Msa0672450:intron | 30.0% | |
| GATTTAACCGATCAAATTGT+TGG | + | chr4_4:17394121-17394140 | None:intergenic | 30.0% | |
| !! | AGTTTTTGTTTAAGCATGAC+AGG | - | chr4_4:17393532-17393551 | Msa0672450:intron | 30.0% |
| ! | TTGCTTGAAAACATGGTTTT+TGG | - | chr4_4:17394500-17394519 | Msa0672450:intron | 30.0% |
| AGAACTTATGCAATTTGACT+TGG | + | chr4_4:17394536-17394555 | None:intergenic | 30.0% | |
| GAAAATCAAAAACAAAGTGG+GGG | + | chr4_4:17394604-17394623 | None:intergenic | 30.0% | |
| ATATATAACTGTTGGACTGT+TGG | + | chr4_4:17393864-17393883 | None:intergenic | 30.0% | |
| TACTGCACATATATAACTGT+TGG | + | chr4_4:17393872-17393891 | None:intergenic | 30.0% | |
| ATAAAGCGTGCATATATTAC+CGG | + | chr4_4:17394752-17394771 | None:intergenic | 30.0% | |
| ! | ATATATGCACGCTTTATTCA+AGG | - | chr4_4:17394755-17394774 | Msa0672450:intron | 30.0% |
| ! | TCTTCTTTTGCCTTTCATAA+AGG | + | chr4_4:17394802-17394821 | None:intergenic | 30.0% |
| ATATACATTCTCTACTGTGA+CGG | + | chr4_4:17394839-17394858 | None:intergenic | 30.0% | |
| TAATGTCCATTAAGAAGTGA+AGG | + | chr4_4:17395019-17395038 | None:intergenic | 30.0% | |
| TAAAAGCTTGTGTGTCTAAT+AGG | - | chr4_4:17395282-17395301 | Msa0672450:intron | 30.0% | |
| AAAGATTAATCACTGCTATG+CGG | - | chr4_4:17395313-17395332 | Msa0672450:intron | 30.0% | |
| TGTGTTGTCTTAAAAACAAG+AGG | - | chr4_4:17395516-17395535 | Msa0672450:intron | 30.0% | |
| GTGTTGTCTTAAAAACAAGA+GGG | - | chr4_4:17395517-17395536 | Msa0672450:intron | 30.0% | |
| !!! | CAACTGCTGGAATTATTTTT+TGG | - | chr4_4:17395632-17395651 | Msa0672450:intron | 30.0% |
| AAGATGAAAAAAACTGTACC+TGG | - | chr4_4:17395776-17395795 | Msa0672450:intron | 30.0% | |
| AGATGAAAAAAACTGTACCT+GGG | - | chr4_4:17395777-17395796 | Msa0672450:intron | 30.0% | |
| TACTATTTATCAATAGTGCG+AGG | - | chr4_4:17395854-17395873 | Msa0672450:intron | 30.0% | |
| AATGGTAGCATATAAGATGT+TGG | - | chr4_4:17396017-17396036 | Msa0672450:intron | 30.0% | |
| ATGTCTCACATAATATTGGA+TGG | - | chr4_4:17396150-17396169 | Msa0672450:intron | 30.0% | |
| ! | ATGTCTCATTGTTTCTCATA+TGG | - | chr4_4:17396198-17396217 | Msa0672450:intron | 30.0% |
| AAAAGGAAACAGTGTATGTT+AGG | - | chr4_4:17396311-17396330 | Msa0672450:intron | 30.0% | |
| !! | AATTGATTTGTTTCCAAGCA+GGG | - | chr4_4:17396448-17396467 | Msa0672450:intron | 30.0% |
| GATCTTCATAATTCAAACTC+AGG | - | chr4_4:17396647-17396666 | Msa0672450:intron | 30.0% | |
| ATCTATGTATACAAGGAAGT+AGG | - | chr4_4:17396675-17396694 | Msa0672450:intron | 30.0% | |
| TTATTGCACCAAACCAAATA+AGG | - | chr4_4:17396734-17396753 | Msa0672450:intron | 30.0% | |
| ! | ACTACAATGTTTTCAGCATT+TGG | - | chr4_4:17396908-17396927 | Msa0672450:CDS | 30.0% |
| ! | CTACAATGTTTTCAGCATTT+GGG | - | chr4_4:17396909-17396928 | Msa0672450:CDS | 30.0% |
| TTTGTCAACTTTGCCAAATT+TGG | - | chr4_4:17396998-17397017 | Msa0672450:intron | 30.0% | |
| TTCTGATGAAGTAGTAAGAA+TGG | - | chr4_4:17397099-17397118 | Msa0672450:exon | 30.0% | |
| GTAACAGAACAACACAACAA+TGG | - | chr4_4:17391986-17392005 | Msa0672450:three_prime_UTR | 35.0% | |
| AACACAACAATGGAAGATTC+AGG | - | chr4_4:17391996-17392015 | Msa0672450:three_prime_UTR | 35.0% | |
| ATCGAAGAGAAGAGAAGAAT+AGG | + | chr4_4:17392071-17392090 | None:intergenic | 35.0% | |
| AGAAATCGAAGCTCATATTC+AGG | - | chr4_4:17392166-17392185 | Msa0672450:CDS | 35.0% | |
| ! | GGAGAATCATTTTGCAACTA+AGG | - | chr4_4:17392232-17392251 | Msa0672450:CDS | 35.0% |
| ACTAAGGAAGCTGAATTGAT+CGG | - | chr4_4:17392248-17392267 | Msa0672450:CDS | 35.0% | |
| GTTTCGCTGCTATAAATTGA+AGG | + | chr4_4:17392512-17392531 | None:intergenic | 35.0% | |
| ATACCAGACATGACTTCATT+AGG | + | chr4_4:17392536-17392555 | None:intergenic | 35.0% | |
| AAAAAAACCTGGTGCTTCAT+GGG | + | chr4_4:17392883-17392902 | None:intergenic | 35.0% | |
| AAAAAAAACCTGGTGCTTCA+TGG | + | chr4_4:17392884-17392903 | None:intergenic | 35.0% | |
| ! | CATTTTACTGAAGATGAGGA+AGG | - | chr4_4:17393090-17393109 | Msa0672450:intron | 35.0% |
| AATAGTGATATCGACACAGT+TGG | - | chr4_4:17393114-17393133 | Msa0672450:intron | 35.0% | |
| GAAAACCAAAAACAAAGTGG+GGG | + | chr4_4:17393812-17393831 | None:intergenic | 35.0% | |
| TGAAGAACCATGAATAGCAA+AGG | + | chr4_4:17393841-17393860 | None:intergenic | 35.0% | |
| AGTGTATAGCATCTCACTAA+AGG | - | chr4_4:17393904-17393923 | Msa0672450:intron | 35.0% | |
| ATTATCTGAATGGAACGGAA+TGG | - | chr4_4:17394083-17394102 | Msa0672450:intron | 35.0% | |
| !! | GTTTTCAAGCAATTCTACGT+GGG | + | chr4_4:17394492-17394511 | None:intergenic | 35.0% |
| !! | TGTTTTCAAGCAATTCTACG+TGG | + | chr4_4:17394493-17394512 | None:intergenic | 35.0% |
| CGTAGAATTGCTTGAAAACA+TGG | - | chr4_4:17394493-17394512 | Msa0672450:intron | 35.0% | |
| TGCATAAGTTCTTCTTTCTC+AGG | - | chr4_4:17394544-17394563 | Msa0672450:intron | 35.0% | |
| GCATAAGTTCTTCTTTCTCA+GGG | - | chr4_4:17394545-17394564 | Msa0672450:intron | 35.0% | |
| TGAAGAACCATGAATAGCAA+GGG | + | chr4_4:17393841-17393860 | None:intergenic | 35.0% | |
| GAAAGAAAAATGACAGATCC+AGG | + | chr4_4:17394941-17394960 | None:intergenic | 35.0% | |
| AACAGTCCTTCACTTCTTAA+TGG | - | chr4_4:17395010-17395029 | Msa0672450:intron | 35.0% | |
| GACAAATAACCAACTTGGTT+TGG | - | chr4_4:17395207-17395226 | Msa0672450:intron | 35.0% | |
| ! | TCAGATTTTCCAAACCAAGT+TGG | + | chr4_4:17395219-17395238 | None:intergenic | 35.0% |
| ATCAGCATATGGAGAAAACT+TGG | - | chr4_4:17395258-17395277 | Msa0672450:intron | 35.0% | |
| TAGCAGTGATTAATCTTTGC+CGG | + | chr4_4:17395311-17395330 | None:intergenic | 35.0% | |
| ! | TCCATATTATAGCTGGTTTC+AGG | - | chr4_4:17395465-17395484 | Msa0672450:intron | 35.0% |
| ! | CCATATTATAGCTGGTTTCA+GGG | - | chr4_4:17395466-17395485 | Msa0672450:intron | 35.0% |
| TAAAAACAAGAGGGACGATA+TGG | - | chr4_4:17395526-17395545 | Msa0672450:intron | 35.0% | |
| CAAGTTAAATTTGCAACTGC+TGG | - | chr4_4:17395619-17395638 | Msa0672450:intron | 35.0% | |
| TCTCACATAATATTGGATGG+AGG | - | chr4_4:17396153-17396172 | Msa0672450:intron | 35.0% | |
| CTCACATAATATTGGATGGA+GGG | - | chr4_4:17396154-17396173 | Msa0672450:intron | 35.0% | |
| CTGCTTGGAAACAAATCAAT+TGG | + | chr4_4:17396449-17396468 | None:intergenic | 35.0% | |
| !! | CAATTGATTTGTTTCCAAGC+AGG | - | chr4_4:17396447-17396466 | Msa0672450:intron | 35.0% |
| TTGTAAAGTGAGGACTTTGT+TGG | - | chr4_4:17396526-17396545 | Msa0672450:intron | 35.0% | |
| CTCTCACATTTCATCTCTCA+AGG | - | chr4_4:17392028-17392047 | Msa0672450:three_prime_UTR | 40.0% | |
| AAGCTCATATTCAGGTCACA+CGG | - | chr4_4:17392174-17392193 | Msa0672450:CDS | 40.0% | |
| ACTCCTAATGAAGTCATGTC+TGG | - | chr4_4:17392530-17392549 | Msa0672450:CDS | 40.0% | |
| ATGTGTCAATGTTGTGTCAC+TGG | - | chr4_4:17392653-17392672 | Msa0672450:intron | 40.0% | |
| TACGGGTACGTTTAGCAAAA+CGG | + | chr4_4:17392810-17392829 | None:intergenic | 40.0% | |
| ! | TTTTAATGGTTGGGTACGGA+CGG | - | chr4_4:17392906-17392925 | Msa0672450:intron | 40.0% |
| CAAAAAAAAGAGGATGTGCG+TGG | + | chr4_4:17393025-17393044 | None:intergenic | 40.0% | |
| !! | CTTGGTACCTTTGCTATTCA+TGG | - | chr4_4:17393831-17393850 | Msa0672450:intron | 40.0% |
| CTCTGTAATATCGTGGATCA+TGG | - | chr4_4:17394443-17394462 | Msa0672450:intron | 40.0% | |
| AAGTTCTTCTTTCTCAGGGA+CGG | - | chr4_4:17394549-17394568 | Msa0672450:intron | 40.0% | |
| GTGAAGAACCATGAATAGCA+AGG | + | chr4_4:17393842-17393861 | None:intergenic | 40.0% | |
| !! | ATCCAGGAATTTTGAGTAGC+GGG | + | chr4_4:17394925-17394944 | None:intergenic | 40.0% |
| !! | GATCCAGGAATTTTGAGTAG+CGG | + | chr4_4:17394926-17394945 | None:intergenic | 40.0% |
| AAGGACTGTTACTGATAGCT+AGG | + | chr4_4:17395000-17395019 | None:intergenic | 40.0% | |
| TTGTGTGTCTAATAGGTTCC+CGG | - | chr4_4:17395289-17395308 | Msa0672450:intron | 40.0% | |
| AGCAGTGATTAATCTTTGCC+GGG | + | chr4_4:17395310-17395329 | None:intergenic | 40.0% | |
| CCCTGAAACCAGCTATAATA+TGG | + | chr4_4:17395469-17395488 | None:intergenic | 40.0% | |
| ! | ATCAGTGAGTACTTTGGAGA+AGG | - | chr4_4:17395490-17395509 | Msa0672450:intron | 40.0% |
| GGACGATATGGTTAACAGAA+TGG | - | chr4_4:17395538-17395557 | Msa0672450:intron | 40.0% | |
| TCACATGTGATTAGGTCGTA+TGG | - | chr4_4:17395803-17395822 | Msa0672450:intron | 40.0% | |
| CACATGTGATTAGGTCGTAT+GGG | - | chr4_4:17395804-17395823 | Msa0672450:intron | 40.0% | |
| AGCTCCAAAGAACCTAAAGT+TGG | - | chr4_4:17395879-17395898 | Msa0672450:intron | 40.0% | |
| ! | TTGGCCAACTTTAGGTTCTT+TGG | + | chr4_4:17395886-17395905 | None:intergenic | 40.0% |
| ACATAATATTGGATGGAGGG+AGG | - | chr4_4:17396157-17396176 | Msa0672450:intron | 40.0% | |
| !! | TTCGGTTTTGGCATTTGTAG+AGG | - | chr4_4:17396613-17396632 | Msa0672450:intron | 40.0% |
| GGGAATTGCATAGAAAGGTT+AGG | + | chr4_4:17396800-17396819 | None:intergenic | 40.0% | |
| GTTTGGGGAATTGCATAGAA+AGG | + | chr4_4:17396805-17396824 | None:intergenic | 40.0% | |
| TCTCAAGGAAATGCTCGATC+AGG | - | chr4_4:17392043-17392062 | Msa0672450:three_prime_UTR | 45.0% | |
| AGCTCATATTCAGGTCACAC+GGG | - | chr4_4:17392175-17392194 | Msa0672450:CDS | 45.0% | |
| CATCGTCAAATGCGAAGAGA+TGG | - | chr4_4:17392211-17392230 | Msa0672450:CDS | 45.0% | |
| GCTGAATTGATCGGAATCTG+TGG | - | chr4_4:17392257-17392276 | Msa0672450:intron | 45.0% | |
| GTTGGATTTGTAACTGTCGC+TGG | - | chr4_4:17392299-17392318 | Msa0672450:intron | 45.0% | |
| TGTCGATGTTGGACACTAGT+AGG | + | chr4_4:17392565-17392584 | None:intergenic | 45.0% | |
| ! | TGTCAGTGTTGTGTCGATGT+TGG | + | chr4_4:17392576-17392595 | None:intergenic | 45.0% |
| TTTGCTAAACGTACCCGTAC+CGG | - | chr4_4:17392811-17392830 | Msa0672450:intron | 45.0% | |
| TTTAATGGTTGGGTACGGAC+GGG | - | chr4_4:17392907-17392926 | Msa0672450:intron | 45.0% | |
| !! | GTACTGCAGTGGTACTGATT+GGG | - | chr4_4:17392930-17392949 | Msa0672450:intron | 45.0% |
| AAATGCCAAGCTGTGTTGCA+CGG | + | chr4_4:17393397-17393416 | None:intergenic | 45.0% | |
| !! | CTTGGTACCCTTGCTATTCA+TGG | - | chr4_4:17394623-17394642 | Msa0672450:intron | 45.0% |
| CAGGGAATCAGTGAGTACTT+TGG | - | chr4_4:17395484-17395503 | Msa0672450:intron | 45.0% | |
| CTAATCACATGTGAATGCCC+AGG | + | chr4_4:17395797-17395816 | None:intergenic | 45.0% | |
| CTGGGCATTCACATGTGATT+AGG | - | chr4_4:17395795-17395814 | Msa0672450:intron | 45.0% | |
| TGTGATTAGGTCGTATGGGA+TGG | - | chr4_4:17395808-17395827 | Msa0672450:intron | 45.0% | |
| GTGATTAGGTCGTATGGGAT+GGG | - | chr4_4:17395809-17395828 | Msa0672450:intron | 45.0% | |
| !!! | TGGATGGAGGGAGGTATTTT+TGG | - | chr4_4:17396166-17396185 | Msa0672450:intron | 45.0% |
| GCAGTAAATTCTTCCCTGCT+TGG | + | chr4_4:17396464-17396483 | None:intergenic | 45.0% | |
| AGCTTCTAATGCTGCAGTAG+GGG | + | chr4_4:17396828-17396847 | None:intergenic | 45.0% | |
| CAGCTTCTAATGCTGCAGTA+GGG | + | chr4_4:17396829-17396848 | None:intergenic | 45.0% | |
| TCAGCTTCTAATGCTGCAGT+AGG | + | chr4_4:17396830-17396849 | None:intergenic | 45.0% | |
| TGAGATCCAGAGCAAGAACT+GGG | - | chr4_4:17396847-17396866 | Msa0672450:CDS | 45.0% | |
| !!! | TATTTTTTTCAAATTATTAT+CGG | - | chr4_4:17392625-17392644 | Msa0672450:intron | 5.0% |
| CTCTTCGCATTTGACGATGC+TGG | + | chr4_4:17392210-17392229 | None:intergenic | 50.0% | |
| GTTCTGCAGTTCGACACTGT+TGG | - | chr4_4:17392281-17392300 | Msa0672450:intron | 50.0% | |
| !! | AGCTTGGCATCTCTGAAGCA+CGG | - | chr4_4:17392779-17392798 | Msa0672450:intron | 50.0% |
| TTGCTAAACGTACCCGTACC+GGG | - | chr4_4:17392812-17392831 | Msa0672450:intron | 50.0% | |
| TTAATGGTTGGGTACGGACG+GGG | - | chr4_4:17392908-17392927 | Msa0672450:intron | 50.0% | |
| !! | GGTACTGCAGTGGTACTGAT+TGG | - | chr4_4:17392929-17392948 | Msa0672450:intron | 50.0% |
| AATGCCAAGCTGTGTTGCAC+GGG | + | chr4_4:17393396-17393415 | None:intergenic | 50.0% | |
| !!! | TCGTGCCCCCACTTTGTTTT+TGG | - | chr4_4:17393804-17393823 | Msa0672450:intron | 50.0% |
| CTCCCGCTACTCAAAATTCC+TGG | - | chr4_4:17394920-17394939 | Msa0672450:intron | 50.0% | |
| AATGCTGCAGTAGGGGGTTT+GGG | + | chr4_4:17396821-17396840 | None:intergenic | 50.0% | |
| TAATGCTGCAGTAGGGGGTT+TGG | + | chr4_4:17396822-17396841 | None:intergenic | 50.0% | |
| GCTTCTAATGCTGCAGTAGG+GGG | + | chr4_4:17396827-17396846 | None:intergenic | 50.0% | |
| CTGAGATCCAGAGCAAGAAC+TGG | - | chr4_4:17396846-17396865 | Msa0672450:CDS | 50.0% | |
| CATTCTCCCAGTTCTTGCTC+TGG | + | chr4_4:17396856-17396875 | None:intergenic | 50.0% | |
| !! | GCTTGGCATCTCTGAAGCAC+GGG | - | chr4_4:17392780-17392799 | Msa0672450:intron | 55.0% |
| TCCCAGTGACTGATGCACGT+TGG | - | chr4_4:17393768-17393787 | Msa0672450:intron | 55.0% | |
| GCCAACGTGCATCAGTCACT+GGG | + | chr4_4:17393772-17393791 | None:intergenic | 55.0% | |
| TGCCAACGTGCATCAGTCAC+TGG | + | chr4_4:17393773-17393792 | None:intergenic | 55.0% | |
| ATGCACGTTGGCACTTGTGC+AGG | - | chr4_4:17393780-17393799 | Msa0672450:intron | 55.0% | |
| ATGCTGCAGTAGGGGGTTTG+GGG | + | chr4_4:17396820-17396839 | None:intergenic | 55.0% | |
| ! | GTACGCACCCATGAAGCACC+AGG | - | chr4_4:17392873-17392892 | Msa0672450:intron | 60.0% |
| AAGCTGTGTTGCACGGGTGC+GGG | + | chr4_4:17393390-17393409 | None:intergenic | 60.0% | |
| CAAGCTGTGTTGCACGGGTG+CGG | + | chr4_4:17393391-17393410 | None:intergenic | 60.0% | |
| TCTCAGGGACGGATGCACGT+CGG | - | chr4_4:17394560-17394579 | Msa0672450:intron | 60.0% | |
| ATGCACGTCGGCACTTGTGC+AGG | - | chr4_4:17394572-17394591 | Msa0672450:intron | 60.0% | |
| ! | TACCCGTACCGGGTACTGCG+CGG | - | chr4_4:17392822-17392841 | Msa0672450:intron | 65.0% |
| TACCCGCGCAGTACCCGGTA+CGG | + | chr4_4:17392828-17392847 | None:intergenic | 65.0% | |
| ACCAGTACCCGCGCAGTACC+CGG | + | chr4_4:17392833-17392852 | None:intergenic | 65.0% | |
| !! | GTACGGACGGGGTACTGCAG+TGG | - | chr4_4:17392919-17392938 | Msa0672450:intron | 65.0% |
| GCTGGTGCGGGTACGGGATA+CGG | + | chr4_4:17393348-17393367 | None:intergenic | 65.0% | |
| !! | TACGGGTGCTGGTGCGGGTA+CGG | + | chr4_4:17393355-17393374 | None:intergenic | 65.0% |
| TGCGGGTACGGTACCCGGTA+CGG | + | chr4_4:17393373-17393392 | None:intergenic | 65.0% | |
| GTGTTGCACGGGTGCGGGTA+CGG | + | chr4_4:17393385-17393404 | None:intergenic | 65.0% | |
| CGCACCCGTGCAACACAGCT+TGG | - | chr4_4:17393389-17393408 | Msa0672450:intron | 65.0% | |
| ! | ACCCGTACCGGGTACTGCGC+GGG | - | chr4_4:17392823-17392842 | Msa0672450:intron | 70.0% |
| ACCCGCGCAGTACCCGGTAC+GGG | + | chr4_4:17392827-17392846 | None:intergenic | 70.0% | |
| ! | ACCGGGTACTGCGCGGGTAC+TGG | - | chr4_4:17392829-17392848 | Msa0672450:intron | 70.0% |
| !! | ACGGGTGCTGGTGCGGGTAC+GGG | + | chr4_4:17393354-17393373 | None:intergenic | 70.0% |
| ACCCGCACCAGCACCCGTAC+CGG | - | chr4_4:17393356-17393375 | Msa0672450:intron | 70.0% | |
| !! | ACCCGGTACGGGTGCTGGTG+CGG | + | chr4_4:17393361-17393380 | None:intergenic | 70.0% |
| ACGGTACCCGGTACGGGTGC+TGG | + | chr4_4:17393366-17393385 | None:intergenic | 70.0% | |
| GCGGGTACGGTACCCGGTAC+GGG | + | chr4_4:17393372-17393391 | None:intergenic | 70.0% | |
| ACGGGTGCGGGTACGGTACC+CGG | + | chr4_4:17393378-17393397 | None:intergenic | 70.0% | |
| !! | CCCGGTACGGGTGCTGGTGC+GGG | + | chr4_4:17393360-17393379 | None:intergenic | 75.0% |
| CCCGCACCAGCACCCGTACC+GGG | - | chr4_4:17393357-17393376 | Msa0672450:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 17391975 | 17397135 | 17391975 | ID=Msa0672450;Name=Msa0672450 |
| chr4_4 | mRNA | 17391975 | 17397135 | 17391975 | ID=Msa0672450-mRNA-1;Parent=Msa0672450;Name=Msa0672450-mRNA-1;_AED=0.09;_eAED=0.09;_QI=30|1|1|1|0.75|0.8|5|183|210 |
| chr4_4 | exon | 17391975 | 17392273 | 17391975 | ID=Msa0672450-mRNA-1:exon:5116;Parent=Msa0672450-mRNA-1 |
| chr4_4 | exon | 17392442 | 17392641 | 17392442 | ID=Msa0672450-mRNA-1:exon:5115;Parent=Msa0672450-mRNA-1 |
| chr4_4 | exon | 17393540 | 17393633 | 17393540 | ID=Msa0672450-mRNA-1:exon:5114;Parent=Msa0672450-mRNA-1 |
| chr4_4 | exon | 17396790 | 17396952 | 17396790 | ID=Msa0672450-mRNA-1:exon:5113;Parent=Msa0672450-mRNA-1 |
| chr4_4 | exon | 17397046 | 17397135 | 17397046 | ID=Msa0672450-mRNA-1:exon:5112;Parent=Msa0672450-mRNA-1 |
| chr4_4 | five_prime_UTR | 17397106 | 17397135 | 17397106 | ID=Msa0672450-mRNA-1:five_prime_utr;Parent=Msa0672450-mRNA-1 |
| chr4_4 | CDS | 17397046 | 17397105 | 17397046 | ID=Msa0672450-mRNA-1:cds;Parent=Msa0672450-mRNA-1 |
| chr4_4 | CDS | 17396790 | 17396952 | 17396790 | ID=Msa0672450-mRNA-1:cds;Parent=Msa0672450-mRNA-1 |
| chr4_4 | CDS | 17393540 | 17393633 | 17393540 | ID=Msa0672450-mRNA-1:cds;Parent=Msa0672450-mRNA-1 |
| chr4_4 | CDS | 17392442 | 17392641 | 17392442 | ID=Msa0672450-mRNA-1:cds;Parent=Msa0672450-mRNA-1 |
| chr4_4 | CDS | 17392158 | 17392273 | 17392158 | ID=Msa0672450-mRNA-1:cds;Parent=Msa0672450-mRNA-1 |
| chr4_4 | three_prime_UTR | 17391975 | 17392157 | 17391975 | ID=Msa0672450-mRNA-1:three_prime_utr;Parent=Msa0672450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
