Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086340 | AES88250.1 | 89.809 | 157 | 3 | 2 | 46 | 189 | 7 | 163 | 3.62e-91 | 276 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086340 | sp|P49169|RR18_PEA | 84.444 | 90 | 14 | 0 | 112 | 201 | 1 | 90 | 1.64e-44 | 146 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086340 | G7JH54 | 89.809 | 157 | 3 | 2 | 46 | 189 | 7 | 163 | 1.73e-91 | 276 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0030030 | Msa1086340 | 0.807357 | 5.259252e-50 | -8.615850e-47 |
| Msa0032040 | Msa1086340 | 0.823081 | 1.678627e-53 | -8.615850e-47 |
| Msa0033600 | Msa1086340 | 0.800509 | 1.394091e-48 | -8.615850e-47 |
| Msa0033650 | Msa1086340 | 0.810933 | 9.007633e-51 | -8.615850e-47 |
| Msa0034800 | Msa1086340 | 0.815016 | 1.147499e-51 | -8.615850e-47 |
| Msa0035090 | Msa1086340 | 0.808530 | 2.959617e-50 | -8.615850e-47 |
| Msa0038310 | Msa1086340 | 0.812222 | 4.725798e-51 | -8.615850e-47 |
| Msa0039200 | Msa1086340 | 0.871359 | 7.259733e-67 | -8.615850e-47 |
| Msa0040190 | Msa1086340 | 0.868008 | 8.983249e-66 | -8.615850e-47 |
| Msa0047470 | Msa1086340 | 0.806416 | 8.312449e-50 | -8.615850e-47 |
| Msa0051100 | Msa1086340 | 0.802718 | 4.911901e-49 | -8.615850e-47 |
| Msa0057740 | Msa1086340 | 0.817792 | 2.744178e-52 | -8.615850e-47 |
| Msa0084550 | Msa1086340 | 0.818134 | 2.296288e-52 | -8.615850e-47 |
| Msa0086820 | Msa1086340 | 0.867179 | 1.656231e-65 | -8.615850e-47 |
| Msa0087880 | Msa1086340 | 0.874792 | 5.119370e-68 | -8.615850e-47 |
| Msa0092750 | Msa1086340 | 0.811029 | 8.585598e-51 | -8.615850e-47 |
| Msa0095140 | Msa1086340 | 0.919506 | 4.136248e-87 | -8.615850e-47 |
| Msa0095200 | Msa1086340 | 0.805238 | 1.470170e-49 | -8.615850e-47 |
| Msa0095240 | Msa1086340 | 0.940061 | 4.433039e-100 | -8.615850e-47 |
| Msa0095270 | Msa1086340 | 0.930009 | 3.054755e-93 | -8.615850e-47 |
| Msa0096230 | Msa1086340 | 0.801837 | 7.455909e-49 | -8.615850e-47 |
| Msa0103060 | Msa1086340 | 0.817100 | 3.928412e-52 | -8.615850e-47 |
| Msa0606060 | Msa1086340 | 0.812023 | 5.223258e-51 | -8.615850e-47 |
| Msa0606140 | Msa1086340 | 0.807967 | 3.902651e-50 | -8.615850e-47 |
| Msa0606680 | Msa1086340 | 0.845327 | 4.352690e-59 | -8.615850e-47 |
| Msa0619330 | Msa1086340 | 0.806315 | 8.730221e-50 | -8.615850e-47 |
| Msa0626890 | Msa1086340 | 0.824384 | 8.312149e-54 | -8.615850e-47 |
| Msa0635350 | Msa1086340 | 0.810268 | 1.254042e-50 | -8.615850e-47 |
| Msa0635990 | Msa1086340 | 0.841214 | 5.443300e-58 | -8.615850e-47 |
| Msa0638040 | Msa1086340 | 0.805216 | 1.485966e-49 | -8.615850e-47 |
| Msa0653710 | Msa1086340 | 0.820306 | 7.352351e-53 | -8.615850e-47 |
| Msa0654060 | Msa1086340 | 0.808694 | 2.731304e-50 | -8.615850e-47 |
| Msa0659130 | Msa1086340 | 0.803031 | 4.231714e-49 | -8.615850e-47 |
| Msa0662850 | Msa1086340 | 0.824455 | 7.995815e-54 | -8.615850e-47 |
| Msa0665040 | Msa1086340 | 0.807843 | 4.146021e-50 | -8.615850e-47 |
| Msa0668630 | Msa1086340 | 0.886845 | 2.399279e-72 | -8.615850e-47 |
| Msa0672350 | Msa1086340 | 0.810875 | 9.271840e-51 | -8.615850e-47 |
| Msa0677110 | Msa1086340 | 0.802535 | 5.358238e-49 | -8.615850e-47 |
| Msa0686610 | Msa1086340 | 0.810595 | 1.065857e-50 | -8.615850e-47 |
| Msa0687320 | Msa1086340 | 0.824005 | 1.020248e-53 | -8.615850e-47 |
| Msa0688760 | Msa1086340 | 0.801098 | 1.057069e-48 | -8.615850e-47 |
| Msa0706710 | Msa1086340 | 0.840073 | 1.082973e-57 | -8.615850e-47 |
| Msa0714020 | Msa1086340 | 0.813482 | 2.503322e-51 | -8.615850e-47 |
| Msa0714160 | Msa1086340 | 0.810700 | 1.011597e-50 | -8.615850e-47 |
| Msa0727020 | Msa1086340 | 0.851287 | 9.788217e-61 | -8.615850e-47 |
| Msa0727040 | Msa1086340 | 0.824032 | 1.005243e-53 | -8.615850e-47 |
| Msa0736330 | Msa1086340 | 0.828431 | 9.024644e-55 | -8.615850e-47 |
| Msa0736930 | Msa1086340 | 0.844782 | 6.108066e-59 | -8.615850e-47 |
| Msa0739570 | Msa1086340 | 0.840550 | 8.126736e-58 | -8.615850e-47 |
| Msa0739610 | Msa1086340 | 0.808873 | 2.500410e-50 | -8.615850e-47 |
| Msa0766880 | Msa1086340 | 0.848587 | 5.574530e-60 | -8.615850e-47 |
| Msa0771960 | Msa1086340 | 0.809195 | 2.133815e-50 | -8.615850e-47 |
| Msa0772150 | Msa1086340 | 0.805338 | 1.400801e-49 | -8.615850e-47 |
| Msa0772210 | Msa1086340 | 0.853982 | 1.666696e-61 | -8.615850e-47 |
| Msa0778060 | Msa1086340 | 0.834751 | 2.500219e-56 | -8.615850e-47 |
| Msa0778580 | Msa1086340 | 0.816027 | 6.834331e-52 | -8.615850e-47 |
| Msa0782330 | Msa1086340 | 0.830725 | 2.497904e-55 | -8.615850e-47 |
| Msa0796450 | Msa1086340 | 0.810914 | 9.094658e-51 | -8.615850e-47 |
| Msa0797620 | Msa1086340 | 0.808839 | 2.542306e-50 | -8.615850e-47 |
| Msa0801390 | Msa1086340 | 0.836744 | 7.819782e-57 | -8.615850e-47 |
| Msa0804930 | Msa1086340 | 0.825025 | 5.869039e-54 | -8.615850e-47 |
| Msa0815950 | Msa1086340 | 0.821162 | 4.675606e-53 | -8.615850e-47 |
| Msa0834160 | Msa1086340 | 0.804907 | 1.723907e-49 | -8.615850e-47 |
| Msa0836200 | Msa1086340 | 0.800775 | 1.230048e-48 | -8.615850e-47 |
| Msa0839730 | Msa1086340 | 0.837447 | 5.171545e-57 | -8.615850e-47 |
| Msa0840570 | Msa1086340 | 0.815003 | 1.155064e-51 | -8.615850e-47 |
| Msa0841980 | Msa1086340 | 0.813613 | 2.342254e-51 | -8.615850e-47 |
| Msa0123940 | Msa1086340 | 0.803587 | 3.245906e-49 | -8.615850e-47 |
| Msa0130120 | Msa1086340 | 0.809207 | 2.120559e-50 | -8.615850e-47 |
| Msa0130620 | Msa1086340 | 0.818784 | 1.636248e-52 | -8.615850e-47 |
| Msa0133670 | Msa1086340 | 0.871434 | 6.857313e-67 | -8.615850e-47 |
| Msa0133880 | Msa1086340 | 0.877621 | 5.425776e-69 | -8.615850e-47 |
| Msa0134550 | Msa1086340 | 0.874642 | 5.759567e-68 | -8.615850e-47 |
| Msa0139740 | Msa1086340 | 0.821394 | 4.133046e-53 | -8.615850e-47 |
| Msa0141670 | Msa1086340 | 0.830039 | 3.674583e-55 | -8.615850e-47 |
| Msa0144510 | Msa1086340 | 0.803955 | 2.722575e-49 | -8.615850e-47 |
| Msa0156780 | Msa1086340 | 0.825412 | 4.753814e-54 | -8.615850e-47 |
| Msa0175900 | Msa1086340 | 0.813515 | 2.462075e-51 | -8.615850e-47 |
| Msa0176530 | Msa1086340 | 0.820136 | 8.045765e-53 | -8.615850e-47 |
| Msa0181290 | Msa1086340 | 0.827500 | 1.512165e-54 | -8.615850e-47 |
| Msa0184120 | Msa1086340 | 0.875098 | 4.025728e-68 | -8.615850e-47 |
| Msa0189050 | Msa1086340 | 0.850094 | 2.120767e-60 | -8.615850e-47 |
| Msa0207530 | Msa1086340 | 0.819230 | 1.295170e-52 | -8.615850e-47 |
| Msa0207900 | Msa1086340 | 0.813963 | 1.961475e-51 | -8.615850e-47 |
| Msa0207990 | Msa1086340 | 0.801741 | 7.801945e-49 | -8.615850e-47 |
| Msa0218480 | Msa1086340 | 0.810193 | 1.301897e-50 | -8.615850e-47 |
| Msa0218590 | Msa1086340 | 0.811852 | 5.689497e-51 | -8.615850e-47 |
| Msa0221860 | Msa1086340 | 0.915238 | 7.464216e-85 | -8.615850e-47 |
| Msa0222070 | Msa1086340 | 0.808091 | 3.671960e-50 | -8.615850e-47 |
| Msa0222120 | Msa1086340 | 0.805660 | 1.199072e-49 | -8.615850e-47 |
| Msa0222510 | Msa1086340 | 0.807588 | 4.696654e-50 | -8.615850e-47 |
| Msa0227290 | Msa1086340 | 0.818393 | 2.006365e-52 | -8.615850e-47 |
| Msa0231310 | Msa1086340 | 0.852450 | 4.580580e-61 | -8.615850e-47 |
| Msa0365150 | Msa1086340 | 0.802815 | 4.690616e-49 | -8.615850e-47 |
| Msa0369750 | Msa1086340 | 0.831490 | 1.621098e-55 | -8.615850e-47 |
| Msa0370510 | Msa1086340 | 0.809351 | 1.975389e-50 | -8.615850e-47 |
| Msa0379900 | Msa1086340 | 0.808417 | 3.129684e-50 | -8.615850e-47 |
| Msa0380430 | Msa1086340 | 0.800236 | 1.584150e-48 | -8.615850e-47 |
| Msa0390950 | Msa1086340 | 0.809984 | 1.444145e-50 | -8.615850e-47 |
| Msa0398610 | Msa1086340 | 0.823508 | 1.333521e-53 | -8.615850e-47 |
| Msa0398620 | Msa1086340 | 0.811271 | 7.608775e-51 | -8.615850e-47 |
| Msa0404870 | Msa1086340 | 0.807129 | 5.878343e-50 | -8.615850e-47 |
| Msa0413740 | Msa1086340 | 0.801071 | 1.070642e-48 | -8.615850e-47 |
| Msa0417150 | Msa1086340 | 0.808192 | 3.494716e-50 | -8.615850e-47 |
| Msa0418000 | Msa1086340 | 0.807361 | 5.247441e-50 | -8.615850e-47 |
| Msa0421100 | Msa1086340 | 0.800808 | 1.211212e-48 | -8.615850e-47 |
| Msa0423110 | Msa1086340 | 0.806110 | 9.646574e-50 | -8.615850e-47 |
| Msa0423590 | Msa1086340 | 0.801919 | 7.174817e-49 | -8.615850e-47 |
| Msa0423600 | Msa1086340 | 0.839436 | 1.586643e-57 | -8.615850e-47 |
| Msa0427050 | Msa1086340 | 0.847050 | 1.477552e-59 | -8.615850e-47 |
| Msa0440110 | Msa1086340 | 0.802816 | 4.687796e-49 | -8.615850e-47 |
| Msa0449900 | Msa1086340 | 0.882535 | 9.599818e-71 | -8.615850e-47 |
| Msa0449930 | Msa1086340 | 0.810385 | 1.183358e-50 | -8.615850e-47 |
| Msa0456480 | Msa1086340 | 0.822996 | 1.756800e-53 | -8.615850e-47 |
| Msa0459120 | Msa1086340 | 0.816293 | 5.958150e-52 | -8.615850e-47 |
| Msa0463960 | Msa1086340 | 0.829271 | 5.652920e-55 | -8.615850e-47 |
| Msa0464500 | Msa1086340 | 0.809228 | 2.098648e-50 | -8.615850e-47 |
| Msa0469270 | Msa1086340 | 0.804070 | 2.576836e-49 | -8.615850e-47 |
| Msa0470650 | Msa1086340 | 0.811021 | 8.622324e-51 | -8.615850e-47 |
| Msa0471080 | Msa1086340 | 0.803527 | 3.340831e-49 | -8.615850e-47 |
| Msa0471090 | Msa1086340 | 0.824573 | 7.503823e-54 | -8.615850e-47 |
| Msa0473320 | Msa1086340 | 0.811963 | 5.382879e-51 | -8.615850e-47 |
| Msa0473450 | Msa1086340 | 0.850477 | 1.655413e-60 | -8.615850e-47 |
| Msa0475360 | Msa1086340 | 0.818227 | 2.187758e-52 | -8.615850e-47 |
| Msa0475740 | Msa1086340 | 0.800013 | 1.758727e-48 | -8.615850e-47 |
| Msa0475830 | Msa1086340 | 0.868438 | 6.529848e-66 | -8.615850e-47 |
| Msa0482580 | Msa1086340 | 0.818374 | 2.026696e-52 | -8.615850e-47 |
| Msa0981300 | Msa1086340 | 0.805120 | 1.556508e-49 | -8.615850e-47 |
| Msa0983670 | Msa1086340 | 0.894482 | 2.365497e-75 | -8.615850e-47 |
| Msa0988500 | Msa1086340 | 0.824416 | 8.167727e-54 | -8.615850e-47 |
| Msa1008960 | Msa1086340 | 0.800005 | 1.765511e-48 | -8.615850e-47 |
| Msa1016130 | Msa1086340 | 0.830472 | 2.881346e-55 | -8.615850e-47 |
| Msa1024580 | Msa1086340 | 0.821806 | 3.318776e-53 | -8.615850e-47 |
| Msa1030280 | Msa1086340 | 0.809575 | 1.767952e-50 | -8.615850e-47 |
| Msa1033160 | Msa1086340 | 0.812494 | 4.121562e-51 | -8.615850e-47 |
| Msa1033230 | Msa1086340 | 0.805109 | 1.564103e-49 | -8.615850e-47 |
| Msa1044040 | Msa1086340 | 0.802470 | 5.525169e-49 | -8.615850e-47 |
| Msa1049440 | Msa1086340 | 0.836659 | 8.222166e-57 | -8.615850e-47 |
| Msa1063180 | Msa1086340 | 0.820440 | 6.851808e-53 | -8.615850e-47 |
| Msa1070900 | Msa1086340 | 0.816744 | 4.722496e-52 | -8.615850e-47 |
| Msa1070930 | Msa1086340 | 0.805529 | 1.277297e-49 | -8.615850e-47 |
| Msa1072770 | Msa1086340 | 0.806752 | 7.060468e-50 | -8.615850e-47 |
| Msa1079610 | Msa1086340 | 0.862470 | 4.954115e-64 | -8.615850e-47 |
| Msa1081600 | Msa1086340 | 0.813125 | 2.999190e-51 | -8.615850e-47 |
| Msa1086020 | Msa1086340 | 0.947761 | 3.581581e-106 | -8.615850e-47 |
| Msa1086060 | Msa1086340 | 0.849246 | 3.657600e-60 | -8.615850e-47 |
| Msa1086160 | Msa1086340 | 0.853762 | 1.928920e-61 | -8.615850e-47 |
| Msa1086170 | Msa1086340 | 0.841631 | 4.227295e-58 | -8.615850e-47 |
| Msa1086260 | Msa1086340 | 0.837027 | 6.621391e-57 | -8.615850e-47 |
| Msa1086290 | Msa1086340 | 0.840795 | 7.010305e-58 | -8.615850e-47 |
| Msa1086330 | Msa1086340 | 0.926617 | 3.666814e-91 | -8.615850e-47 |
| Msa1086340 | Msa1086370 | 0.858112 | 1.029876e-62 | -8.615850e-47 |
| Msa1086340 | Msa1086410 | 0.946848 | 2.104171e-105 | -8.615850e-47 |
| Msa1086340 | Msa1086440 | 0.819197 | 1.317795e-52 | -8.615850e-47 |
| Msa1086340 | Msa1086480 | 0.810555 | 1.087768e-50 | -8.615850e-47 |
| Msa1086340 | Msa1086520 | 0.948398 | 1.021278e-106 | -8.615850e-47 |
| Msa1086340 | Msa1086630 | 0.933739 | 1.185412e-95 | -8.615850e-47 |
| Msa1086340 | Msa1086690 | 0.939995 | 4.962545e-100 | -8.615850e-47 |
| Msa1086340 | Msa1086830 | 0.923829 | 1.583162e-89 | -8.615850e-47 |
| Msa1086340 | Msa1086870 | 0.829930 | 3.908118e-55 | -8.615850e-47 |
| Msa1086340 | Msa1087000 | 0.937554 | 2.869609e-98 | -8.615850e-47 |
| Msa1086340 | Msa1102180 | 0.835801 | 1.358455e-56 | -8.615850e-47 |
| Msa1086340 | Msa1108530 | 0.827806 | 1.276443e-54 | -8.615850e-47 |
| Msa1086340 | Msa1120540 | 0.801143 | 1.034652e-48 | -8.615850e-47 |
| Msa1086340 | Msa1122480 | 0.805459 | 1.321194e-49 | -8.615850e-47 |
| Msa1086340 | Msa1123340 | 0.834656 | 2.641742e-56 | -8.615850e-47 |
| Msa1086340 | Msa1124440 | 0.860604 | 1.840198e-63 | -8.615850e-47 |
| Msa1086340 | Msa1126910 | 0.820215 | 7.716028e-53 | -8.615850e-47 |
| Msa1086340 | Msa1130070 | 0.815436 | 9.255702e-52 | -8.615850e-47 |
| Msa1086340 | Msa1140940 | 0.802196 | 6.292573e-49 | -8.615850e-47 |
| Msa1086340 | Msa1143140 | 0.837922 | 3.905038e-57 | -8.615850e-47 |
| Msa1086340 | Msa1151120 | 0.804867 | 1.758089e-49 | -8.615850e-47 |
| Msa1086340 | Msa1152280 | 0.827431 | 1.570554e-54 | -8.615850e-47 |
| Msa1086340 | Msa1157160 | 0.842951 | 1.888931e-58 | -8.615850e-47 |
| Msa1086340 | Msa1161120 | 0.805515 | 1.285885e-49 | -8.615850e-47 |
| Msa1086340 | Msa1161160 | 0.829372 | 5.339985e-55 | -8.615850e-47 |
| Msa1086340 | Msa1166370 | 0.811739 | 6.021069e-51 | -8.615850e-47 |
| Msa1086340 | Msa1168130 | 0.851848 | 6.793855e-61 | -8.615850e-47 |
| Msa1086340 | Msa1173410 | 0.810241 | 1.270864e-50 | -8.615850e-47 |
| Msa1086340 | Msa1178970 | 0.805698 | 1.177196e-49 | -8.615850e-47 |
| Msa1086340 | Msa1195860 | 0.818773 | 1.645193e-52 | -8.615850e-47 |
| Msa1086340 | Msa1198420 | 0.807559 | 4.764177e-50 | -8.615850e-47 |
| Msa1086340 | Msa1199690 | 0.823548 | 1.305402e-53 | -8.615850e-47 |
| Msa1086340 | Msa1204110 | 0.818514 | 1.883715e-52 | -8.615850e-47 |
| Msa1086340 | Msa1209650 | 0.813377 | 2.639725e-51 | -8.615850e-47 |
| Msa1086340 | Msa1211880 | 0.848489 | 5.933777e-60 | -8.615850e-47 |
| Msa1086340 | Msa1214900 | 0.800063 | 1.718139e-48 | -8.615850e-47 |
| Msa1086340 | Msa1220740 | 0.800370 | 1.487871e-48 | -8.615850e-47 |
| Msa1086340 | Msa1221170 | -0.807387 | 5.182609e-50 | -8.615850e-47 |
| Msa1086340 | Msa1226600 | 0.806578 | 7.685899e-50 | -8.615850e-47 |
| Msa1086340 | Msa1233770 | 0.802933 | 4.433843e-49 | -8.615850e-47 |
| Msa1086340 | Msa1246420 | 0.827839 | 1.253440e-54 | -8.615850e-47 |
| Msa1086340 | Msa1248400 | 0.808687 | 2.739835e-50 | -8.615850e-47 |
| Msa1086340 | Msa1252040 | 0.835588 | 1.537497e-56 | -8.615850e-47 |
| Msa1086340 | Msa1264230 | 0.802684 | 4.992678e-49 | -8.615850e-47 |
| Msa1086340 | Msa1265500 | -0.811498 | 6.793596e-51 | -8.615850e-47 |
| Msa1086340 | Msa1276080 | 0.801758 | 7.741006e-49 | -8.615850e-47 |
| Msa1086340 | Msa1279240 | 0.808207 | 3.468972e-50 | -8.615850e-47 |
| Msa1086340 | Msa1280020 | 0.825165 | 5.437858e-54 | -8.615850e-47 |
| Msa1086340 | Msa1287160 | 0.823434 | 1.388145e-53 | -8.615850e-47 |
| Msa1086340 | Msa1287340 | 0.814492 | 1.499099e-51 | -8.615850e-47 |
| Msa1086340 | Msa1289340 | 0.804686 | 1.917949e-49 | -8.615850e-47 |
| Msa1086340 | Msa1298740 | 0.810545 | 1.093018e-50 | -8.615850e-47 |
| Msa1086340 | Msa1309910 | 0.829501 | 4.970521e-55 | -8.615850e-47 |
| Msa1086340 | Msa1316160 | 0.804639 | 1.961701e-49 | -8.615850e-47 |
| Msa1086340 | Msa1319520 | 0.806943 | 6.436235e-50 | -8.615850e-47 |
| Msa1086340 | Msa1325980 | 0.805997 | 1.018483e-49 | -8.615850e-47 |
| Msa1086340 | Msa1327820 | 0.829889 | 3.999301e-55 | -8.615850e-47 |
| Msa1086340 | Msa1332180 | 0.807837 | 4.158408e-50 | -8.615850e-47 |
| Msa1086340 | Msa1352820 | 0.807083 | 6.010930e-50 | -8.615850e-47 |
| Msa1086340 | Msa1354850 | 0.933136 | 2.971815e-95 | -8.615850e-47 |
| Msa1086340 | Msa1354890 | 0.826162 | 3.155048e-54 | -8.615850e-47 |
| Msa1086340 | Msa1355020 | 0.921067 | 5.748074e-88 | -8.615850e-47 |
| Msa1086340 | Msa1355060 | 0.813289 | 2.759978e-51 | -8.615850e-47 |
| Msa1086340 | Msa1355260 | 0.832527 | 8.982983e-56 | -8.615850e-47 |
| Msa1086340 | Msa1357720 | 0.808663 | 2.773312e-50 | -8.615850e-47 |
| Msa1086340 | Msa1360380 | 0.801998 | 6.911096e-49 | -8.615850e-47 |
| Msa1086340 | Msa1366700 | 0.804797 | 1.818186e-49 | -8.615850e-47 |
| Msa1086340 | Msa1371250 | 0.843336 | 1.491753e-58 | -8.615850e-47 |
| Msa1086340 | Msa1373590 | 0.800876 | 1.172996e-48 | -8.615850e-47 |
| Msa1086340 | Msa1379370 | 0.821334 | 4.266173e-53 | -8.615850e-47 |
| Msa1086340 | Msa1380540 | 0.907678 | 3.908936e-81 | -8.615850e-47 |
| Msa1086340 | Msa1384980 | 0.809267 | 2.059335e-50 | -8.615850e-47 |
| Msa1086340 | Msa1385450 | 0.868764 | 5.123997e-66 | -8.615850e-47 |
| Msa1086340 | Msa1385940 | 0.853084 | 3.018998e-61 | -8.615850e-47 |
| Msa1086340 | Msa1387090 | 0.846269 | 2.414960e-59 | -8.615850e-47 |
| Msa1086340 | Msa1388230 | 0.806867 | 6.678193e-50 | -8.615850e-47 |
| Msa1086340 | Msa1390410 | 0.851519 | 8.416434e-61 | -8.615850e-47 |
| Msa1086340 | Msa1393600 | 0.825072 | 5.721528e-54 | -8.615850e-47 |
| Msa1086340 | Msa1394090 | 0.930575 | 1.340445e-93 | -8.615850e-47 |
| Msa1086340 | Msa1394100 | 0.933481 | 1.756507e-95 | -8.615850e-47 |
| Msa1086340 | Msa1394170 | 0.827271 | 1.715438e-54 | -8.615850e-47 |
| Msa1086340 | Msa1394240 | 0.812162 | 4.870750e-51 | -8.615850e-47 |
| Msa1086340 | Msa1394280 | 0.922251 | 1.253564e-88 | -8.615850e-47 |
| Msa1086340 | Msa1397540 | 0.802595 | 5.208375e-49 | -8.615850e-47 |
| Msa1086340 | Msa1400600 | 0.838634 | 2.559492e-57 | -8.615850e-47 |
| Msa1086340 | Msa1405190 | 0.803706 | 3.066578e-49 | -8.615850e-47 |
| Msa1086340 | Msa1408190 | 0.805673 | 1.191835e-49 | -8.615850e-47 |
| Msa1086340 | Msa1415120 | 0.868973 | 4.385309e-66 | -8.615850e-47 |
| Msa1086340 | Msa1422750 | 0.829960 | 3.841637e-55 | -8.615850e-47 |
| Msa1086340 | Msa1428440 | 0.841403 | 4.854727e-58 | -8.615850e-47 |
| Msa1086340 | Msa1432350 | 0.802110 | 6.552291e-49 | -8.615850e-47 |
| Msa1086340 | Msa1435470 | 0.818632 | 1.771659e-52 | -8.615850e-47 |
| Msa1086340 | Msa1438420 | 0.805675 | 1.190388e-49 | -8.615850e-47 |
| Msa1086340 | Msa1439160 | 0.840733 | 7.278346e-58 | -8.615850e-47 |
| Msa1086340 | Msa1440180 | 0.805317 | 1.415477e-49 | -8.615850e-47 |
| Msa1086340 | Msa1448990 | 0.805623 | 1.220546e-49 | -8.615850e-47 |
| Msa1086340 | Msa1449740 | 0.802781 | 4.767273e-49 | -8.615850e-47 |
| Msa1086340 | Msa1450420 | 0.828412 | 9.119440e-55 | -8.615850e-47 |
| Msa1086340 | Msa1451780 | 0.801308 | 9.571380e-49 | -8.615850e-47 |
| Msa1086340 | Msa1465410 | 0.805607 | 1.230253e-49 | -8.615850e-47 |
| Msa1086340 | Msa1466170 | 0.817132 | 3.863861e-52 | -8.615850e-47 |
| Msa0240290 | Msa1086340 | 0.818460 | 1.937568e-52 | -8.615850e-47 |
| Msa0256170 | Msa1086340 | 0.838657 | 2.524130e-57 | -8.615850e-47 |
| Msa0263620 | Msa1086340 | 0.805425 | 1.343331e-49 | -8.615850e-47 |
| Msa0268180 | Msa1086340 | 0.868264 | 7.428127e-66 | -8.615850e-47 |
| Msa0268220 | Msa1086340 | 0.922592 | 8.050705e-89 | -8.615850e-47 |
| Msa0268340 | Msa1086340 | 0.930287 | 2.040838e-93 | -8.615850e-47 |
| Msa0268380 | Msa1086340 | 0.821064 | 4.924968e-53 | -8.615850e-47 |
| Msa0268420 | Msa1086340 | 0.867666 | 1.157029e-65 | -8.615850e-47 |
| Msa0268460 | Msa1086340 | 0.945006 | 6.825599e-104 | -8.615850e-47 |
| Msa0268500 | Msa1086340 | 0.946437 | 4.620931e-105 | -8.615850e-47 |
| Msa0268540 | Msa1086340 | 0.845476 | 3.966026e-59 | -8.615850e-47 |
| Msa0268650 | Msa1086340 | 0.853441 | 2.385222e-61 | -8.615850e-47 |
| Msa0268680 | Msa1086340 | 0.936318 | 2.102316e-97 | -8.615850e-47 |
| Msa0268690 | Msa1086340 | 0.917078 | 8.225329e-86 | -8.615850e-47 |
| Msa0268730 | Msa1086340 | 0.824224 | 9.064345e-54 | -8.615850e-47 |
| Msa0268760 | Msa1086340 | 0.821107 | 4.813526e-53 | -8.615850e-47 |
| Msa0268850 | Msa1086340 | 0.861386 | 1.063933e-63 | -8.615850e-47 |
| Msa0268890 | Msa1086340 | 0.811723 | 6.070978e-51 | -8.615850e-47 |
| Msa0268900 | Msa1086340 | 0.938323 | 8.131172e-99 | -8.615850e-47 |
| Msa0268930 | Msa1086340 | 0.833657 | 4.702321e-56 | -8.615850e-47 |
| Msa0269060 | Msa1086340 | 0.861842 | 7.720148e-64 | -8.615850e-47 |
| Msa0269100 | Msa1086340 | 0.949995 | 4.093984e-108 | -8.615850e-47 |
| Msa0278080 | Msa1086340 | 0.800314 | 1.527306e-48 | -8.615850e-47 |
| Msa0282860 | Msa1086340 | 0.801874 | 7.327261e-49 | -8.615850e-47 |
| Msa0301800 | Msa1086340 | 0.808754 | 2.651477e-50 | -8.615850e-47 |
| Msa0306130 | Msa1086340 | 0.851527 | 8.373752e-61 | -8.615850e-47 |
| Msa0309160 | Msa1086340 | 0.851085 | 1.116519e-60 | -8.615850e-47 |
| Msa0312570 | Msa1086340 | 0.800906 | 1.156893e-48 | -8.615850e-47 |
| Msa0317630 | Msa1086340 | 0.800972 | 1.121553e-48 | -8.615850e-47 |
| Msa0330270 | Msa1086340 | 0.835249 | 1.872863e-56 | -8.615850e-47 |
| Msa0330370 | Msa1086340 | 0.802974 | 4.348685e-49 | -8.615850e-47 |
| Msa0331740 | Msa1086340 | 0.807558 | 4.766369e-50 | -8.615850e-47 |
| Msa0331780 | Msa1086340 | 0.804921 | 1.712795e-49 | -8.615850e-47 |
| Msa0336270 | Msa1086340 | 0.825980 | 3.486558e-54 | -8.615850e-47 |
| Msa0338570 | Msa1086340 | 0.813179 | 2.917281e-51 | -8.615850e-47 |
| Msa0338900 | Msa1086340 | 0.831935 | 1.258866e-55 | -8.615850e-47 |
| Msa0344200 | Msa1086340 | 0.830685 | 2.555500e-55 | -8.615850e-47 |
| Msa0344240 | Msa1086340 | 0.904547 | 1.095282e-79 | -8.615850e-47 |
| Msa0344250 | Msa1086340 | 0.902480 | 9.286923e-79 | -8.615850e-47 |
| Msa0358710 | Msa1086340 | 0.807036 | 6.149703e-50 | -8.615850e-47 |
| Msa0486860 | Msa1086340 | 0.800755 | 1.241823e-48 | -8.615850e-47 |
| Msa0505660 | Msa1086340 | 0.811709 | 6.113136e-51 | -8.615850e-47 |
| Msa0509500 | Msa1086340 | 0.800395 | 1.470857e-48 | -8.615850e-47 |
| Msa0509510 | Msa1086340 | 0.830824 | 2.362596e-55 | -8.615850e-47 |
| Msa0515680 | Msa1086340 | 0.811181 | 7.961273e-51 | -8.615850e-47 |
| Msa0528170 | Msa1086340 | 0.803964 | 2.710542e-49 | -8.615850e-47 |
| Msa0530210 | Msa1086340 | 0.804819 | 1.798833e-49 | -8.615850e-47 |
| Msa0551520 | Msa1086340 | 0.808535 | 2.953213e-50 | -8.615850e-47 |
| Msa0558890 | Msa1086340 | 0.840148 | 1.035151e-57 | -8.615850e-47 |
| Msa0568490 | Msa1086340 | 0.817112 | 3.903342e-52 | -8.615850e-47 |
| Msa0568810 | Msa1086340 | 0.801498 | 8.754020e-49 | -8.615850e-47 |
| Msa0577870 | Msa1086340 | 0.810719 | 1.002325e-50 | -8.615850e-47 |
| Msa0582530 | Msa1086340 | 0.827933 | 1.189810e-54 | -8.615850e-47 |
| Msa0582570 | Msa1086340 | 0.913867 | 3.737398e-84 | -8.615850e-47 |
| Msa0582580 | Msa1086340 | 0.917701 | 3.851129e-86 | -8.615850e-47 |
| Msa0582620 | Msa1086340 | 0.855758 | 5.090096e-62 | -8.615850e-47 |
| Msa0582710 | Msa1086340 | 0.826410 | 2.754408e-54 | -8.615850e-47 |
| Msa0582740 | Msa1086340 | 0.856418 | 3.260152e-62 | -8.615850e-47 |
| Msa0582830 | Msa1086340 | 0.834375 | 3.107869e-56 | -8.615850e-47 |
| Msa0582900 | Msa1086340 | 0.826429 | 2.726724e-54 | -8.615850e-47 |
| Msa0587060 | Msa1086340 | 0.814968 | 1.175591e-51 | -8.615850e-47 |
| Msa0591370 | Msa1086340 | 0.832036 | 1.188804e-55 | -8.615850e-47 |
| Msa0595240 | Msa1086340 | 0.812042 | 5.173455e-51 | -8.615850e-47 |
| Msa0595780 | Msa1086340 | 0.812883 | 3.388137e-51 | -8.615850e-47 |
| Msa0598250 | Msa1086340 | 0.801402 | 9.160178e-49 | -8.615850e-47 |
| Msa0601780 | Msa1086340 | 0.819309 | 1.242684e-52 | -8.615850e-47 |
| Msa0855490 | Msa1086340 | 0.822147 | 2.766919e-53 | -8.615850e-47 |
| Msa0860270 | Msa1086340 | 0.850909 | 1.251453e-60 | -8.615850e-47 |
| Msa0887000 | Msa1086340 | 0.810353 | 1.202366e-50 | -8.615850e-47 |
| Msa0910650 | Msa1086340 | 0.807945 | 3.944037e-50 | -8.615850e-47 |
| Msa0924820 | Msa1086340 | 0.897222 | 1.733993e-76 | -8.615850e-47 |
| Msa0924860 | Msa1086340 | 0.811724 | 6.068382e-51 | -8.615850e-47 |
| Msa0924890 | Msa1086340 | 0.822530 | 2.255354e-53 | -8.615850e-47 |
| Msa0924970 | Msa1086340 | 0.873110 | 1.895529e-67 | -8.615850e-47 |
| Msa0925020 | Msa1086340 | 0.919308 | 5.293305e-87 | -8.615850e-47 |
| Msa0930990 | Msa1086340 | 0.863493 | 2.393955e-64 | -8.615850e-47 |
| Msa0931090 | Msa1086340 | 0.845533 | 3.826641e-59 | -8.615850e-47 |
| Msa0931150 | Msa1086340 | 0.831985 | 1.223767e-55 | -8.615850e-47 |
| Msa0931280 | Msa1086340 | 0.854621 | 1.089548e-61 | -8.615850e-47 |
| Msa0934830 | Msa1086340 | 0.802301 | 5.986963e-49 | -8.615850e-47 |
| Msa0971860 | Msa1086340 | 0.807460 | 5.001772e-50 | -8.615850e-47 |
| Msa0975180 | Msa1086340 | 0.802051 | 6.738644e-49 | -8.615850e-47 |
| Msa0978000 | Msa1086340 | 0.829869 | 4.043785e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086340 | MtrunA17_Chr6g0466591 | 88.889 | 90 | 6 | 1 | 112 | 197 | 1 | 90 | 6.42e-48 | 152 |
| Msa1086340 | MtrunA17_Chr4g0016891 | 85.714 | 98 | 7 | 3 | 112 | 202 | 1 | 98 | 3.34e-45 | 145 |
| Msa1086340 | MtrunA17_Chr4g0015801 | 93.827 | 81 | 3 | 1 | 112 | 190 | 1 | 81 | 1.22e-44 | 144 |
| Msa1086340 | MtrunA17_CPg0492771 | 93.827 | 81 | 3 | 1 | 112 | 190 | 1 | 81 | 1.22e-44 | 144 |
| Msa1086340 | MtrunA17_Chr7g0237831 | 94.667 | 75 | 2 | 1 | 112 | 184 | 1 | 75 | 1.21e-40 | 132 |
| Msa1086340 | MtrunA17_CPg0492781 | 98.182 | 55 | 1 | 0 | 46 | 100 | 7 | 61 | 8.39e-35 | 117 |
| Msa1086340 | MtrunA17_Chr4g0015791 | 98.182 | 55 | 1 | 0 | 46 | 100 | 7 | 61 | 8.39e-35 | 117 |
| Msa1086340 | MtrunA17_Chr8g0355601 | 96.364 | 55 | 2 | 0 | 46 | 100 | 7 | 61 | 4.23e-34 | 115 |
| Msa1086340 | MtrunA17_Chr6g0465781 | 96.610 | 59 | 2 | 0 | 112 | 170 | 1 | 59 | 5.25e-33 | 113 |
| Msa1086340 | MtrunA17_Chr7g0224991 | 97.368 | 38 | 1 | 0 | 62 | 99 | 6 | 43 | 1.27e-21 | 83.6 |
| Msa1086340 | MtrunA17_CPg0492791 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.40e-14 | 65.1 |
| Msa1086340 | MtrunA17_Chr4g0015781 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.40e-14 | 65.1 |
| Msa1086340 | MtrunA17_Chr4g0028951 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.40e-14 | 65.1 |
| Msa1086340 | MtrunA17_Chr8g0355611 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 1.40e-14 | 65.1 |
| Msa1086340 | MtrunA17_Chr4g0016881 | 100.000 | 30 | 0 | 0 | 15 | 44 | 1 | 30 | 3.56e-14 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086340 | ATCG00650.1 | 83.750 | 80 | 13 | 0 | 112 | 191 | 1 | 80 | 2.25e-40 | 133 |
| Msa1086340 | ATCG00640.1 | 74.545 | 55 | 14 | 0 | 46 | 100 | 7 | 61 | 2.47e-26 | 96.7 |
| Msa1086340 | ATCG00630.1 | 84.375 | 32 | 5 | 0 | 15 | 46 | 1 | 32 | 4.25e-12 | 58.9 |
Find 21 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACGAATAACTGTTATTT+TGG | 0.125276 | 7_2:-87342943 | Msa1086340:CDS |
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | 7_2:-87342899 | Msa1086340:CDS |
| AATCGTATGTTTGCAACAAA+AGG | 0.396841 | 7_2:+87342803 | None:intergenic |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | 7_2:-87343568 | Msa1086340:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | 7_2:-87342898 | Msa1086340:CDS |
| AGTTTGTCCCCGATCCAATC+GGG | 0.455483 | 7_2:-87342506 | Msa1086340:CDS |
| GAGTTTGTCCCCGATCCAAT+CGG | 0.465376 | 7_2:-87342507 | Msa1086340:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | 7_2:-87343551 | Msa1086340:CDS |
| AAAGGTGACGAATTAACAAA+AGG | 0.521079 | 7_2:+87342332 | None:intergenic |
| ACACAATACACCTAGTCGAT+TGG | 0.524208 | 7_2:-87342844 | Msa1086340:CDS |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | 7_2:-87343561 | Msa1086340:CDS |
| ATCGTATGTTTGCAACAAAA+GGG | 0.538893 | 7_2:+87342804 | None:intergenic |
| TTTCTCAATTCCAATCGACT+AGG | 0.574270 | 7_2:+87342834 | None:intergenic |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | 7_2:-87343582 | Msa1086340:CDS |
| GAGTCGCTTAGATTTATCCA+TGG | 0.585856 | 7_2:+87342559 | None:intergenic |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | 7_2:+87343566 | None:intergenic |
| GTATAGGAATAAACAAACCA+TGG | 0.629025 | 7_2:-87342576 | Msa1086340:CDS |
| TATCGACTTATTAGTCAACA+AGG | 0.637963 | 7_2:-87342449 | Msa1086340:CDS |
| GTTTGTCCCCGATCCAATCG+GGG | 0.647747 | 7_2:-87342505 | Msa1086340:CDS |
| TTTGTCCCCGATCCAATCGG+GGG | 0.661952 | 7_2:-87342504 | Msa1086340:CDS |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | 7_2:-87342897 | Msa1086340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr7_2:87342588-87342607 | Msa1086340:CDS | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr7_2:87342682-87342701 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr7_2:87342838-87342857 | Msa1086340:CDS | 15.0% |
| !!! | AAATCCTTTTTTATAAGAAA+TGG | - | chr7_2:87343338-87343357 | Msa1086340:intron | 15.0% |
| !!! | AATCCTTTTTTATAAGAAAT+GGG | - | chr7_2:87343339-87343358 | Msa1086340:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | + | chr7_2:87343634-87343653 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr7_2:87342588-87342607 | Msa1086340:CDS | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr7_2:87342682-87342701 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr7_2:87342838-87342857 | Msa1086340:CDS | 15.0% |
| !!! | AAATCCTTTTTTATAAGAAA+TGG | - | chr7_2:87343338-87343357 | Msa1086340:intron | 15.0% |
| !!! | AATCCTTTTTTATAAGAAAT+GGG | - | chr7_2:87343339-87343358 | Msa1086340:intron | 15.0% |
| !!! | TTTTTTTCATTATTCACAAA+AGG | + | chr7_2:87343634-87343653 | None:intergenic | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr7_2:87342314-87342333 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr7_2:87342313-87342332 | Msa1086340:CDS | 20.0% |
| !! | AATAACTAGAATCAAAAAAG+GGG | + | chr7_2:87342465-87342484 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+GGG | + | chr7_2:87342466-87342485 | None:intergenic | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr7_2:87342519-87342538 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr7_2:87342591-87342610 | Msa1086340:CDS | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr7_2:87342597-87342616 | Msa1086340:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr7_2:87342713-87342732 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr7_2:87343002-87343021 | Msa1086340:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr7_2:87343038-87343057 | Msa1086340:intron | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | - | chr7_2:87343172-87343191 | Msa1086340:intron | 20.0% |
| !! | AATCCCATTTCTTATAAAAA+AGG | + | chr7_2:87343345-87343364 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | - | chr7_2:87343347-87343366 | Msa1086340:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | + | chr7_2:87343554-87343573 | None:intergenic | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr7_2:87342314-87342333 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr7_2:87342313-87342332 | Msa1086340:CDS | 20.0% |
| !! | AATAACTAGAATCAAAAAAG+GGG | + | chr7_2:87342465-87342484 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+GGG | + | chr7_2:87342466-87342485 | None:intergenic | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr7_2:87342519-87342538 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr7_2:87342591-87342610 | Msa1086340:CDS | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr7_2:87342597-87342616 | Msa1086340:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr7_2:87342713-87342732 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr7_2:87343002-87343021 | Msa1086340:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr7_2:87343038-87343057 | Msa1086340:intron | 20.0% |
| !! | AGATAAAGAAATAGAGAAAA+TGG | - | chr7_2:87343172-87343191 | Msa1086340:intron | 20.0% |
| !! | AATCCCATTTCTTATAAAAA+AGG | + | chr7_2:87343345-87343364 | None:intergenic | 20.0% |
| !!! | TTTATAAGAAATGGGATTTT+CGG | - | chr7_2:87343347-87343366 | Msa1086340:intron | 20.0% |
| !!! | AATTAATCGTTGTTGTTTTA+AGG | + | chr7_2:87343554-87343573 | None:intergenic | 20.0% |
| ! | CCAATAACTAGAATCAAAAA+AGG | + | chr7_2:87342467-87342486 | None:intergenic | 25.0% |
| !!! | CCTTTTTTGATTCTAGTTAT+TGG | - | chr7_2:87342464-87342483 | Msa1086340:CDS | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr7_2:87342536-87342555 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr7_2:87342537-87342556 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr7_2:87342717-87342736 | Msa1086340:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr7_2:87342718-87342737 | Msa1086340:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr7_2:87342956-87342975 | Msa1086340:intron | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | + | chr7_2:87343213-87343232 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | + | chr7_2:87343214-87343233 | None:intergenic | 25.0% |
| ! | CCAATAACTAGAATCAAAAA+AGG | + | chr7_2:87342467-87342486 | None:intergenic | 25.0% |
| !!! | CCTTTTTTGATTCTAGTTAT+TGG | - | chr7_2:87342464-87342483 | Msa1086340:CDS | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr7_2:87342536-87342555 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr7_2:87342537-87342556 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr7_2:87342717-87342736 | Msa1086340:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr7_2:87342718-87342737 | Msa1086340:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr7_2:87342956-87342975 | Msa1086340:intron | 25.0% |
| ! | TTATAGAATTTACCTCCTAA+GGG | + | chr7_2:87343213-87343232 | None:intergenic | 25.0% |
| ! | TTTATAGAATTTACCTCCTA+AGG | + | chr7_2:87343214-87343233 | None:intergenic | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr7_2:87342316-87342335 | Msa1086340:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr7_2:87342354-87342373 | Msa1086340:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr7_2:87342426-87342445 | Msa1086340:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr7_2:87342469-87342488 | Msa1086340:CDS | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr7_2:87342623-87342642 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr7_2:87342697-87342716 | Msa1086340:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr7_2:87342721-87342740 | Msa1086340:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr7_2:87342959-87342978 | Msa1086340:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr7_2:87342992-87343011 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr7_2:87343046-87343065 | Msa1086340:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr7_2:87343047-87343066 | Msa1086340:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr7_2:87343048-87343067 | Msa1086340:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr7_2:87343144-87343163 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr7_2:87343145-87343164 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | - | chr7_2:87343369-87343388 | Msa1086340:intron | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | - | chr7_2:87343416-87343435 | Msa1086340:intron | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | - | chr7_2:87343496-87343515 | Msa1086340:intron | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | + | chr7_2:87343616-87343635 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr7_2:87342316-87342335 | Msa1086340:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr7_2:87342354-87342373 | Msa1086340:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr7_2:87342426-87342445 | Msa1086340:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr7_2:87342469-87342488 | Msa1086340:CDS | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr7_2:87342623-87342642 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr7_2:87342697-87342716 | Msa1086340:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr7_2:87342721-87342740 | Msa1086340:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr7_2:87342959-87342978 | Msa1086340:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr7_2:87342992-87343011 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr7_2:87343046-87343065 | Msa1086340:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr7_2:87343047-87343066 | Msa1086340:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr7_2:87343048-87343067 | Msa1086340:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr7_2:87343144-87343163 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr7_2:87343145-87343164 | None:intergenic | 30.0% | |
| GTATAGGAATAAACAAACCA+TGG | - | chr7_2:87343369-87343388 | Msa1086340:intron | 30.0% | |
| ! | AATCTAAGCAATCTTTTCGT+AGG | - | chr7_2:87343416-87343435 | Msa1086340:intron | 30.0% |
| !! | TATCGACTTATTAGTCAACA+AGG | - | chr7_2:87343496-87343515 | Msa1086340:intron | 30.0% |
| AAAGGTGACGAATTAACAAA+AGG | + | chr7_2:87343616-87343635 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr7_2:87342626-87342645 | Msa1086340:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr7_2:87342646-87342665 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr7_2:87342647-87342666 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr7_2:87342722-87342741 | Msa1086340:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr7_2:87342917-87342936 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr7_2:87342966-87342985 | Msa1086340:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr7_2:87343114-87343133 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | - | chr7_2:87343353-87343372 | Msa1086340:intron | 35.0% |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr7_2:87342626-87342645 | Msa1086340:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr7_2:87342646-87342665 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr7_2:87342647-87342666 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr7_2:87342722-87342741 | Msa1086340:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr7_2:87342917-87342936 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr7_2:87342966-87342985 | Msa1086340:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr7_2:87343114-87343133 | None:intergenic | 35.0% | |
| ! | AGAAATGGGATTTTCGGTAT+AGG | - | chr7_2:87343353-87343372 | Msa1086340:intron | 35.0% |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr7_2:87342613-87342632 | Msa1086340:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr7_2:87342635-87342654 | Msa1086340:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr7_2:87343101-87343120 | Msa1086340:intron | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | - | chr7_2:87343195-87343214 | Msa1086340:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | + | chr7_2:87343389-87343408 | None:intergenic | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr7_2:87342613-87342632 | Msa1086340:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr7_2:87342635-87342654 | Msa1086340:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr7_2:87343101-87343120 | Msa1086340:intron | 40.0% | |
| ATTGTTTGTGTGTCACCCTT+AGG | - | chr7_2:87343195-87343214 | Msa1086340:intron | 40.0% | |
| GAGTCGCTTAGATTTATCCA+TGG | + | chr7_2:87343389-87343408 | None:intergenic | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr7_2:87342382-87342401 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | chr7_2:87342448-87342467 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr7_2:87342474-87342493 | Msa1086340:CDS | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr7_2:87342475-87342494 | Msa1086340:CDS | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | + | chr7_2:87343456-87343475 | None:intergenic | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr7_2:87342382-87342401 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | chr7_2:87342448-87342467 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr7_2:87342474-87342493 | Msa1086340:CDS | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr7_2:87342475-87342494 | Msa1086340:CDS | 45.0% | |
| AATCAATTCGATCCCCCGAT+TGG | + | chr7_2:87343456-87343475 | None:intergenic | 45.0% | |
| !!! | ATATTTATATTTGTTATATA+AGG | + | chr7_2:87343286-87343305 | None:intergenic | 5.0% |
| !!! | ATATTTATATTTGTTATATA+AGG | + | chr7_2:87343286-87343305 | None:intergenic | 5.0% |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr7_2:87342363-87342382 | Msa1086340:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr7_2:87342377-87342396 | Msa1086340:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr7_2:87342384-87342403 | Msa1086340:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | chr7_2:87342447-87342466 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr7_2:87342476-87342495 | Msa1086340:CDS | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr7_2:87342973-87342992 | Msa1086340:intron | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | - | chr7_2:87343198-87343217 | Msa1086340:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | - | chr7_2:87343438-87343457 | Msa1086340:intron | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | - | chr7_2:87343439-87343458 | Msa1086340:intron | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | + | chr7_2:87343451-87343470 | None:intergenic | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr7_2:87342363-87342382 | Msa1086340:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr7_2:87342377-87342396 | Msa1086340:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr7_2:87342384-87342403 | Msa1086340:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | chr7_2:87342447-87342466 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr7_2:87342476-87342495 | Msa1086340:CDS | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr7_2:87342973-87342992 | Msa1086340:intron | 50.0% | |
| GTTTGTGTGTCACCCTTAGG+AGG | - | chr7_2:87343198-87343217 | Msa1086340:intron | 50.0% | |
| GAGTTTGTCCCCGATCCAAT+CGG | - | chr7_2:87343438-87343457 | Msa1086340:intron | 50.0% | |
| AGTTTGTCCCCGATCCAATC+GGG | - | chr7_2:87343439-87343458 | Msa1086340:intron | 50.0% | |
| ATTCGATCCCCCGATTGGAT+CGG | + | chr7_2:87343451-87343470 | None:intergenic | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr7_2:87342394-87342413 | Msa1086340:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr7_2:87342975-87342994 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr7_2:87342972-87342991 | Msa1086340:intron | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | - | chr7_2:87343440-87343459 | Msa1086340:intron | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | - | chr7_2:87343441-87343460 | Msa1086340:intron | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | + | chr7_2:87343450-87343469 | None:intergenic | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr7_2:87342394-87342413 | Msa1086340:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr7_2:87342975-87342994 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr7_2:87342972-87342991 | Msa1086340:intron | 55.0% | |
| GTTTGTCCCCGATCCAATCG+GGG | - | chr7_2:87343440-87343459 | Msa1086340:intron | 55.0% | |
| TTTGTCCCCGATCCAATCGG+GGG | - | chr7_2:87343441-87343460 | Msa1086340:intron | 55.0% | |
| TTCGATCCCCCGATTGGATC+GGG | + | chr7_2:87343450-87343469 | None:intergenic | 55.0% | |
| TCGATCCCCCGATTGGATCG+GGG | + | chr7_2:87343449-87343468 | None:intergenic | 60.0% | |
| TCGATCCCCCGATTGGATCG+GGG | + | chr7_2:87343449-87343468 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87342304 | 87343663 | 87342304 | ID=Msa1086340;Name=Msa1086340 |
| chr7_2 | mRNA | 87342304 | 87343663 | 87342304 | ID=Msa1086340-mRNA-1;Parent=Msa1086340;Name=Msa1086340-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0|0|1|0|0|3|0|202 |
| chr7_2 | exon | 87343531 | 87343663 | 87343531 | ID=Msa1086340-mRNA-1:exon:23769;Parent=Msa1086340-mRNA-1 |
| chr7_2 | exon | 87342800 | 87342966 | 87342800 | ID=Msa1086340-mRNA-1:exon:23768;Parent=Msa1086340-mRNA-1 |
| chr7_2 | exon | 87342304 | 87342612 | 87342304 | ID=Msa1086340-mRNA-1:exon:23767;Parent=Msa1086340-mRNA-1 |
| chr7_2 | CDS | 87343531 | 87343663 | 87343531 | ID=Msa1086340-mRNA-1:cds;Parent=Msa1086340-mRNA-1 |
| chr7_2 | CDS | 87342800 | 87342966 | 87342800 | ID=Msa1086340-mRNA-1:cds;Parent=Msa1086340-mRNA-1 |
| chr7_2 | CDS | 87342304 | 87342612 | 87342304 | ID=Msa1086340-mRNA-1:cds;Parent=Msa1086340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
