Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381370 | XP_013461799.1 | 96.659 | 449 | 15 | 0 | 1 | 449 | 1 | 449 | 0.0 | 895 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381370 | sp|Q9FZI8|LCAT1_ARATH | 59.059 | 425 | 164 | 4 | 10 | 431 | 4 | 421 | 0.0 | 518 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381370 | A0A072V1F9 | 96.659 | 449 | 15 | 0 | 1 | 449 | 1 | 449 | 0.0 | 895 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000220 | Msa0381370 | 0.807976 | 3.884230e-50 | -8.615850e-47 |
Msa0002690 | Msa0381370 | 0.802860 | 4.592102e-49 | -8.615850e-47 |
Msa0002700 | Msa0381370 | 0.809032 | 2.311608e-50 | -8.615850e-47 |
Msa0005500 | Msa0381370 | 0.801281 | 9.694965e-49 | -8.615850e-47 |
Msa0007810 | Msa0381370 | 0.802282 | 6.040965e-49 | -8.615850e-47 |
Msa0011410 | Msa0381370 | 0.809279 | 2.046511e-50 | -8.615850e-47 |
Msa0016830 | Msa0381370 | 0.821573 | 3.757611e-53 | -8.615850e-47 |
Msa0021570 | Msa0381370 | 0.810530 | 1.101068e-50 | -8.615850e-47 |
Msa0021710 | Msa0381370 | 0.831404 | 1.702188e-55 | -8.615850e-47 |
Msa0030710 | Msa0381370 | 0.812202 | 4.773405e-51 | -8.615850e-47 |
Msa0046700 | Msa0381370 | 0.813413 | 2.592485e-51 | -8.615850e-47 |
Msa0049670 | Msa0381370 | 0.826286 | 2.948196e-54 | -8.615850e-47 |
Msa0053360 | Msa0381370 | 0.809360 | 1.966475e-50 | -8.615850e-47 |
Msa0056220 | Msa0381370 | 0.841048 | 6.016153e-58 | -8.615850e-47 |
Msa0056230 | Msa0381370 | 0.806696 | 7.257524e-50 | -8.615850e-47 |
Msa0060080 | Msa0381370 | 0.806511 | 7.940030e-50 | -8.615850e-47 |
Msa0065190 | Msa0381370 | 0.827718 | 1.339944e-54 | -8.615850e-47 |
Msa0080100 | Msa0381370 | 0.816418 | 5.586829e-52 | -8.615850e-47 |
Msa0083200 | Msa0381370 | 0.837355 | 5.457621e-57 | -8.615850e-47 |
Msa0092750 | Msa0381370 | 0.803416 | 3.523370e-49 | -8.615850e-47 |
Msa0105140 | Msa0381370 | 0.804872 | 1.753170e-49 | -8.615850e-47 |
Msa0112800 | Msa0381370 | 0.802012 | 6.866508e-49 | -8.615850e-47 |
Msa0138380 | Msa0381370 | 0.825206 | 5.318490e-54 | -8.615850e-47 |
Msa0143210 | Msa0381370 | 0.812335 | 4.463846e-51 | -8.615850e-47 |
Msa0144000 | Msa0381370 | -0.804619 | 1.980318e-49 | -8.615850e-47 |
Msa0156780 | Msa0381370 | 0.832159 | 1.108207e-55 | -8.615850e-47 |
Msa0175480 | Msa0381370 | 0.813073 | 3.078829e-51 | -8.615850e-47 |
Msa0180540 | Msa0381370 | 0.800790 | 1.221369e-48 | -8.615850e-47 |
Msa0181740 | Msa0381370 | 0.829739 | 4.349354e-55 | -8.615850e-47 |
Msa0183960 | Msa0381370 | 0.822629 | 2.138726e-53 | -8.615850e-47 |
Msa0186750 | Msa0381370 | 0.812664 | 3.783100e-51 | -8.615850e-47 |
Msa0190470 | Msa0381370 | 0.808866 | 2.509629e-50 | -8.615850e-47 |
Msa0206600 | Msa0381370 | 0.803009 | 4.276423e-49 | -8.615850e-47 |
Msa0216010 | Msa0381370 | 0.862668 | 4.304553e-64 | -8.615850e-47 |
Msa0218480 | Msa0381370 | 0.819859 | 9.309642e-53 | -8.615850e-47 |
Msa0218590 | Msa0381370 | 0.815633 | 8.364210e-52 | -8.615850e-47 |
Msa0219720 | Msa0381370 | 0.817789 | 2.748903e-52 | -8.615850e-47 |
Msa0222720 | Msa0381370 | 0.813077 | 3.071613e-51 | -8.615850e-47 |
Msa0228360 | Msa0381370 | 0.826898 | 2.107109e-54 | -8.615850e-47 |
Msa0232660 | Msa0381370 | 0.800051 | 1.727656e-48 | -8.615850e-47 |
Msa0234960 | Msa0381370 | 0.806036 | 9.999006e-50 | -8.615850e-47 |
Msa0237040 | Msa0381370 | 0.814169 | 1.766755e-51 | -8.615850e-47 |
Msa0369430 | Msa0381370 | 0.801082 | 1.065100e-48 | -8.615850e-47 |
Msa0369580 | Msa0381370 | 0.848346 | 6.497841e-60 | -8.615850e-47 |
Msa0372380 | Msa0381370 | 0.835192 | 1.936120e-56 | -8.615850e-47 |
Msa0372550 | Msa0381370 | 0.806628 | 7.501449e-50 | -8.615850e-47 |
Msa0375930 | Msa0381370 | 0.820553 | 6.455291e-53 | -8.615850e-47 |
Msa0377460 | Msa0381370 | 0.823019 | 1.734675e-53 | -8.615850e-47 |
Msa0377690 | Msa0381370 | 0.819363 | 1.207723e-52 | -8.615850e-47 |
Msa0381370 | Msa0384330 | 0.810225 | 1.281115e-50 | -8.615850e-47 |
Msa0381370 | Msa0403670 | 0.801348 | 9.392147e-49 | -8.615850e-47 |
Msa0381370 | Msa0404180 | 0.805787 | 1.127948e-49 | -8.615850e-47 |
Msa0381370 | Msa0405040 | 0.808054 | 3.740009e-50 | -8.615850e-47 |
Msa0381370 | Msa0417000 | 0.850471 | 1.662570e-60 | -8.615850e-47 |
Msa0381370 | Msa0422520 | 0.995768 | 1.108804e-219 | -8.615850e-47 |
Msa0381370 | Msa0424570 | 0.820663 | 6.089558e-53 | -8.615850e-47 |
Msa0381370 | Msa0426680 | 0.847337 | 1.232425e-59 | -8.615850e-47 |
Msa0381370 | Msa0426860 | 0.822003 | 2.987788e-53 | -8.615850e-47 |
Msa0381370 | Msa0426890 | 0.840108 | 1.060307e-57 | -8.615850e-47 |
Msa0381370 | Msa0426990 | 0.809628 | 1.722346e-50 | -8.615850e-47 |
Msa0381370 | Msa0436620 | 0.810076 | 1.379671e-50 | -8.615850e-47 |
Msa0381370 | Msa0443250 | 0.842922 | 1.923676e-58 | -8.615850e-47 |
Msa0381370 | Msa0463820 | 0.859683 | 3.490740e-63 | -8.615850e-47 |
Msa0381370 | Msa0463960 | 0.801380 | 9.255714e-49 | -8.615850e-47 |
Msa0381370 | Msa0472870 | 0.806156 | 9.432509e-50 | -8.615850e-47 |
Msa0381370 | Msa0473320 | 0.813257 | 2.805613e-51 | -8.615850e-47 |
Msa0381370 | Msa0475360 | 0.818270 | 2.139969e-52 | -8.615850e-47 |
Msa0381370 | Msa0483410 | 0.815532 | 8.809383e-52 | -8.615850e-47 |
Msa0381370 | Msa0497060 | 0.812131 | 4.945817e-51 | -8.615850e-47 |
Msa0381370 | Msa0511600 | 0.825228 | 5.256423e-54 | -8.615850e-47 |
Msa0381370 | Msa0512770 | 0.833583 | 4.905331e-56 | -8.615850e-47 |
Msa0381370 | Msa0513660 | 0.801690 | 7.994289e-49 | -8.615850e-47 |
Msa0381370 | Msa0516000 | 0.823127 | 1.637048e-53 | -8.615850e-47 |
Msa0381370 | Msa0516340 | 0.816161 | 6.379017e-52 | -8.615850e-47 |
Msa0381370 | Msa0517400 | 0.824003 | 1.021222e-53 | -8.615850e-47 |
Msa0381370 | Msa0522730 | 0.812359 | 4.410724e-51 | -8.615850e-47 |
Msa0381370 | Msa0539570 | 0.819763 | 9.792440e-53 | -8.615850e-47 |
Msa0381370 | Msa0549330 | 0.807134 | 5.863704e-50 | -8.615850e-47 |
Msa0381370 | Msa0558800 | 0.815743 | 7.905646e-52 | -8.615850e-47 |
Msa0381370 | Msa0559440 | 0.820991 | 5.119545e-53 | -8.615850e-47 |
Msa0381370 | Msa0559640 | 0.813486 | 2.498367e-51 | -8.615850e-47 |
Msa0381370 | Msa0564000 | 0.803790 | 2.946320e-49 | -8.615850e-47 |
Msa0381370 | Msa0568490 | 0.808535 | 2.953182e-50 | -8.615850e-47 |
Msa0381370 | Msa0570310 | 0.810024 | 1.415911e-50 | -8.615850e-47 |
Msa0381370 | Msa0571220 | 0.813365 | 2.656465e-51 | -8.615850e-47 |
Msa0381370 | Msa0574230 | 0.826799 | 2.224525e-54 | -8.615850e-47 |
Msa0381370 | Msa0576510 | 0.837684 | 4.494339e-57 | -8.615850e-47 |
Msa0381370 | Msa0577290 | 0.805163 | 1.524383e-49 | -8.615850e-47 |
Msa0381370 | Msa0577910 | 0.803679 | 3.106735e-49 | -8.615850e-47 |
Msa0381370 | Msa0577920 | 0.843063 | 1.763634e-58 | -8.615850e-47 |
Msa0381370 | Msa0577960 | 0.825677 | 4.113943e-54 | -8.615850e-47 |
Msa0381370 | Msa0581190 | 0.805105 | 1.567571e-49 | -8.615850e-47 |
Msa0381370 | Msa0601470 | 0.819765 | 9.779403e-53 | -8.615850e-47 |
Msa0381370 | Msa0604640 | 0.809345 | 1.980758e-50 | -8.615850e-47 |
Msa0381370 | Msa0617010 | 0.813198 | 2.890127e-51 | -8.615850e-47 |
Msa0381370 | Msa0619480 | 0.810581 | 1.073751e-50 | -8.615850e-47 |
Msa0381370 | Msa0622800 | 0.815548 | 8.736219e-52 | -8.615850e-47 |
Msa0381370 | Msa0622930 | 0.807712 | 4.420258e-50 | -8.615850e-47 |
Msa0381370 | Msa0624260 | 0.813010 | 3.178407e-51 | -8.615850e-47 |
Msa0381370 | Msa0624360 | 0.814044 | 1.882050e-51 | -8.615850e-47 |
Msa0381370 | Msa0625550 | 0.825544 | 4.424933e-54 | -8.615850e-47 |
Msa0381370 | Msa0641970 | 0.812138 | 4.929517e-51 | -8.615850e-47 |
Msa0381370 | Msa0654400 | 0.817998 | 2.465520e-52 | -8.615850e-47 |
Msa0381370 | Msa0654500 | 0.826798 | 2.226445e-54 | -8.615850e-47 |
Msa0381370 | Msa0656570 | 0.806878 | 6.642782e-50 | -8.615850e-47 |
Msa0381370 | Msa0659640 | 0.806216 | 9.161237e-50 | -8.615850e-47 |
Msa0381370 | Msa0667710 | 0.801001 | 1.106291e-48 | -8.615850e-47 |
Msa0381370 | Msa0677110 | 0.800054 | 1.725117e-48 | -8.615850e-47 |
Msa0381370 | Msa0685390 | 0.820836 | 5.555697e-53 | -8.615850e-47 |
Msa0381370 | Msa0700870 | 0.814758 | 1.308648e-51 | -8.615850e-47 |
Msa0381370 | Msa0700930 | 0.811601 | 6.452263e-51 | -8.615850e-47 |
Msa0381370 | Msa0707870 | 0.847986 | 8.169501e-60 | -8.615850e-47 |
Msa0381370 | Msa0708120 | 0.803202 | 3.901495e-49 | -8.615850e-47 |
Msa0381370 | Msa0708840 | 0.802340 | 5.877898e-49 | -8.615850e-47 |
Msa0381370 | Msa0713530 | 0.811423 | 7.052835e-51 | -8.615850e-47 |
Msa0381370 | Msa0716670 | 0.807235 | 5.581481e-50 | -8.615850e-47 |
Msa0381370 | Msa0720850 | 0.804787 | 1.826915e-49 | -8.615850e-47 |
Msa0381370 | Msa0729120 | 0.834579 | 2.762367e-56 | -8.615850e-47 |
Msa0381370 | Msa0729590 | 0.809362 | 1.964801e-50 | -8.615850e-47 |
Msa0381370 | Msa0731740 | 0.831754 | 1.395010e-55 | -8.615850e-47 |
Msa0381370 | Msa0736330 | 0.803601 | 3.224321e-49 | -8.615850e-47 |
Msa0381370 | Msa0736930 | 0.817044 | 4.043835e-52 | -8.615850e-47 |
Msa0381370 | Msa0742690 | 0.809296 | 2.030031e-50 | -8.615850e-47 |
Msa0381370 | Msa0751000 | 0.848279 | 6.781838e-60 | -8.615850e-47 |
Msa0381370 | Msa0754790 | 0.850021 | 2.221949e-60 | -8.615850e-47 |
Msa0381370 | Msa0754840 | 0.856347 | 3.420683e-62 | -8.615850e-47 |
Msa0381370 | Msa0755590 | 0.813992 | 1.932469e-51 | -8.615850e-47 |
Msa0381370 | Msa0762390 | 0.846680 | 1.865951e-59 | -8.615850e-47 |
Msa0381370 | Msa0762470 | 0.841427 | 4.784342e-58 | -8.615850e-47 |
Msa0381370 | Msa0766880 | 0.821128 | 4.761022e-53 | -8.615850e-47 |
Msa0381370 | Msa0766910 | 0.827469 | 1.537849e-54 | -8.615850e-47 |
Msa0381370 | Msa0770020 | 0.818353 | 2.048552e-52 | -8.615850e-47 |
Msa0381370 | Msa0772400 | 0.803537 | 3.324771e-49 | -8.615850e-47 |
Msa0381370 | Msa0775430 | 0.810478 | 1.129925e-50 | -8.615850e-47 |
Msa0381370 | Msa0779830 | 0.806431 | 8.252983e-50 | -8.615850e-47 |
Msa0381370 | Msa0781900 | 0.810288 | 1.241712e-50 | -8.615850e-47 |
Msa0381370 | Msa0786600 | 0.802414 | 5.675014e-49 | -8.615850e-47 |
Msa0381370 | Msa0791700 | 0.802905 | 4.493145e-49 | -8.615850e-47 |
Msa0381370 | Msa0794040 | 0.867336 | 1.475467e-65 | -8.615850e-47 |
Msa0381370 | Msa0797240 | 0.819785 | 9.679836e-53 | -8.615850e-47 |
Msa0381370 | Msa0800400 | 0.838957 | 2.111481e-57 | -8.615850e-47 |
Msa0381370 | Msa0803930 | 0.806449 | 8.180113e-50 | -8.615850e-47 |
Msa0381370 | Msa0807840 | 0.846231 | 2.473981e-59 | -8.615850e-47 |
Msa0381370 | Msa0811710 | 0.804931 | 1.704335e-49 | -8.615850e-47 |
Msa0381370 | Msa0822680 | 0.815467 | 9.107857e-52 | -8.615850e-47 |
Msa0381370 | Msa0822800 | 0.820587 | 6.338129e-53 | -8.615850e-47 |
Msa0381370 | Msa0827560 | 0.817514 | 3.170937e-52 | -8.615850e-47 |
Msa0381370 | Msa0829770 | 0.800710 | 1.268663e-48 | -8.615850e-47 |
Msa0381370 | Msa0833910 | 0.812185 | 4.813382e-51 | -8.615850e-47 |
Msa0381370 | Msa0834160 | 0.808519 | 2.975628e-50 | -8.615850e-47 |
Msa0381370 | Msa0835010 | 0.804090 | 2.552322e-49 | -8.615850e-47 |
Msa0381370 | Msa0839730 | 0.813881 | 2.045125e-51 | -8.615850e-47 |
Msa0381370 | Msa0840450 | 0.801923 | 7.160383e-49 | -8.615850e-47 |
Msa0381370 | Msa0841980 | 0.803288 | 3.743786e-49 | -8.615850e-47 |
Msa0381370 | Msa0848780 | 0.830064 | 3.623189e-55 | -8.615850e-47 |
Msa0381370 | Msa0850520 | 0.845533 | 3.827747e-59 | -8.615850e-47 |
Msa0381370 | Msa0862750 | 0.817377 | 3.403842e-52 | -8.615850e-47 |
Msa0381370 | Msa0866310 | 0.833465 | 5.251157e-56 | -8.615850e-47 |
Msa0381370 | Msa0866510 | 0.832292 | 1.027243e-55 | -8.615850e-47 |
Msa0381370 | Msa0870210 | 0.839761 | 1.305991e-57 | -8.615850e-47 |
Msa0381370 | Msa0878090 | 0.818212 | 2.205542e-52 | -8.615850e-47 |
Msa0381370 | Msa0880370 | 0.802772 | 4.786358e-49 | -8.615850e-47 |
Msa0381370 | Msa0883880 | 0.825819 | 3.807940e-54 | -8.615850e-47 |
Msa0381370 | Msa0894580 | 0.818260 | 2.150982e-52 | -8.615850e-47 |
Msa0381370 | Msa0896920 | -0.822747 | 2.007622e-53 | -8.615850e-47 |
Msa0381370 | Msa0899080 | 0.807062 | 6.071940e-50 | -8.615850e-47 |
Msa0381370 | Msa0907520 | 0.804760 | 1.850303e-49 | -8.615850e-47 |
Msa0381370 | Msa0924820 | 0.812424 | 4.269556e-51 | -8.615850e-47 |
Msa0381370 | Msa0943870 | 0.821702 | 3.509199e-53 | -8.615850e-47 |
Msa0381370 | Msa0946570 | 0.809212 | 2.116065e-50 | -8.615850e-47 |
Msa0381370 | Msa0978290 | 0.810999 | 8.717406e-51 | -8.615850e-47 |
Msa0381370 | Msa0981900 | 0.808775 | 2.623564e-50 | -8.615850e-47 |
Msa0381370 | Msa1011140 | 0.819387 | 1.193169e-52 | -8.615850e-47 |
Msa0381370 | Msa1020500 | 0.800048 | 1.730465e-48 | -8.615850e-47 |
Msa0381370 | Msa1040030 | 0.800197 | 1.613363e-48 | -8.615850e-47 |
Msa0381370 | Msa1051410 | 0.817377 | 3.404248e-52 | -8.615850e-47 |
Msa0381370 | Msa1057940 | 0.804973 | 1.670521e-49 | -8.615850e-47 |
Msa0381370 | Msa1066980 | 0.803391 | 3.565719e-49 | -8.615850e-47 |
Msa0381370 | Msa1079610 | 0.808905 | 2.461125e-50 | -8.615850e-47 |
Msa0381370 | Msa1084630 | 0.832896 | 7.276072e-56 | -8.615850e-47 |
Msa0381370 | Msa1085820 | -0.800906 | 1.157048e-48 | -8.615850e-47 |
Msa0381370 | Msa1098070 | 0.807277 | 5.467535e-50 | -8.615850e-47 |
Msa0381370 | Msa1098570 | 0.817477 | 3.231779e-52 | -8.615850e-47 |
Msa0381370 | Msa1121580 | 0.851130 | 1.084529e-60 | -8.615850e-47 |
Msa0381370 | Msa1122480 | 0.805311 | 1.419169e-49 | -8.615850e-47 |
Msa0381370 | Msa1124180 | 0.822890 | 1.859012e-53 | -8.615850e-47 |
Msa0381370 | Msa1124440 | 0.818353 | 2.048825e-52 | -8.615850e-47 |
Msa0381370 | Msa1125610 | 0.805261 | 1.453605e-49 | -8.615850e-47 |
Msa0381370 | Msa1132320 | 0.858102 | 1.037177e-62 | -8.615850e-47 |
Msa0381370 | Msa1140700 | 0.829926 | 3.916184e-55 | -8.615850e-47 |
Msa0381370 | Msa1156270 | 0.833096 | 6.489766e-56 | -8.615850e-47 |
Msa0381370 | Msa1156530 | 0.814052 | 1.874783e-51 | -8.615850e-47 |
Msa0381370 | Msa1164650 | 0.814417 | 1.557211e-51 | -8.615850e-47 |
Msa0381370 | Msa1166020 | 0.810710 | 1.006975e-50 | -8.615850e-47 |
Msa0381370 | Msa1171640 | 0.822933 | 1.816902e-53 | -8.615850e-47 |
Msa0381370 | Msa1173410 | 0.827798 | 1.282239e-54 | -8.615850e-47 |
Msa0381370 | Msa1179680 | 0.808715 | 2.702809e-50 | -8.615850e-47 |
Msa0381370 | Msa1182960 | 0.814299 | 1.653328e-51 | -8.615850e-47 |
Msa0381370 | Msa1190300 | 0.805966 | 1.034244e-49 | -8.615850e-47 |
Msa0381370 | Msa1190320 | 0.807972 | 3.892353e-50 | -8.615850e-47 |
Msa0381370 | Msa1198420 | 0.803184 | 3.935244e-49 | -8.615850e-47 |
Msa0381370 | Msa1199690 | 0.841047 | 6.019370e-58 | -8.615850e-47 |
Msa0381370 | Msa1203090 | 0.865841 | 4.407464e-65 | -8.615850e-47 |
Msa0381370 | Msa1203860 | 0.807355 | 5.263259e-50 | -8.615850e-47 |
Msa0381370 | Msa1207660 | 0.800699 | 1.275260e-48 | -8.615850e-47 |
Msa0381370 | Msa1211880 | 0.838585 | 2.635786e-57 | -8.615850e-47 |
Msa0381370 | Msa1212070 | 0.810437 | 1.153305e-50 | -8.615850e-47 |
Msa0381370 | Msa1215660 | 0.828195 | 1.029124e-54 | -8.615850e-47 |
Msa0381370 | Msa1219530 | 0.811935 | 5.457685e-51 | -8.615850e-47 |
Msa0381370 | Msa1220390 | 0.820795 | 5.678107e-53 | -8.615850e-47 |
Msa0381370 | Msa1221170 | -0.807933 | 3.968369e-50 | -8.615850e-47 |
Msa0381370 | Msa1223510 | 0.832500 | 9.124596e-56 | -8.615850e-47 |
Msa0381370 | Msa1232640 | 0.811712 | 6.103004e-51 | -8.615850e-47 |
Msa0381370 | Msa1235030 | 0.853007 | 3.176559e-61 | -8.615850e-47 |
Msa0381370 | Msa1235050 | 0.832307 | 1.018885e-55 | -8.615850e-47 |
Msa0381370 | Msa1252040 | 0.828525 | 8.563548e-55 | -8.615850e-47 |
Msa0381370 | Msa1258100 | 0.800923 | 1.147355e-48 | -8.615850e-47 |
Msa0381370 | Msa1263000 | -0.815416 | 9.348329e-52 | -8.615850e-47 |
Msa0381370 | Msa1264230 | 0.800700 | 1.274676e-48 | -8.615850e-47 |
Msa0381370 | Msa1264300 | 0.806674 | 7.335735e-50 | -8.615850e-47 |
Msa0381370 | Msa1267800 | 0.801933 | 7.127643e-49 | -8.615850e-47 |
Msa0381370 | Msa1279240 | 0.829368 | 5.353280e-55 | -8.615850e-47 |
Msa0381370 | Msa1286660 | 0.816419 | 5.585467e-52 | -8.615850e-47 |
Msa0381370 | Msa1290090 | 0.808770 | 2.630079e-50 | -8.615850e-47 |
Msa0381370 | Msa1292700 | 0.821141 | 4.727370e-53 | -8.615850e-47 |
Msa0381370 | Msa1299750 | 0.809913 | 1.495807e-50 | -8.615850e-47 |
Msa0381370 | Msa1301410 | 0.807176 | 5.743236e-50 | -8.615850e-47 |
Msa0381370 | Msa1316160 | 0.816573 | 5.157882e-52 | -8.615850e-47 |
Msa0381370 | Msa1323920 | 0.814129 | 1.802539e-51 | -8.615850e-47 |
Msa0381370 | Msa1331900 | 0.801488 | 8.794349e-49 | -8.615850e-47 |
Msa0381370 | Msa1332180 | 0.814838 | 1.256441e-51 | -8.615850e-47 |
Msa0381370 | Msa1336350 | 0.828182 | 1.036342e-54 | -8.615850e-47 |
Msa0381370 | Msa1343540 | 0.814455 | 1.527357e-51 | -8.615850e-47 |
Msa0381370 | Msa1351380 | 0.812643 | 3.823600e-51 | -8.615850e-47 |
Msa0381370 | Msa1352840 | 0.815142 | 1.075755e-51 | -8.615850e-47 |
Msa0381370 | Msa1355020 | 0.801541 | 8.575731e-49 | -8.615850e-47 |
Msa0381370 | Msa1358790 | 0.804615 | 1.984383e-49 | -8.615850e-47 |
Msa0381370 | Msa1361500 | -0.812625 | 3.858677e-51 | -8.615850e-47 |
Msa0381370 | Msa1373590 | 0.830808 | 2.384204e-55 | -8.615850e-47 |
Msa0381370 | Msa1374210 | 0.828993 | 6.601763e-55 | -8.615850e-47 |
Msa0381370 | Msa1385940 | 0.803897 | 2.798865e-49 | -8.615850e-47 |
Msa0381370 | Msa1386180 | 0.801772 | 7.690367e-49 | -8.615850e-47 |
Msa0381370 | Msa1386190 | 0.818003 | 2.458309e-52 | -8.615850e-47 |
Msa0381370 | Msa1388070 | 0.807775 | 4.286079e-50 | -8.615850e-47 |
Msa0381370 | Msa1389990 | 0.813320 | 2.717619e-51 | -8.615850e-47 |
Msa0381370 | Msa1392650 | 0.803233 | 3.844017e-49 | -8.615850e-47 |
Msa0381370 | Msa1393600 | 0.856113 | 4.006605e-62 | -8.615850e-47 |
Msa0381370 | Msa1396310 | 0.812612 | 3.884729e-51 | -8.615850e-47 |
Msa0381370 | Msa1400330 | 0.833481 | 5.202461e-56 | -8.615850e-47 |
Msa0381370 | Msa1400600 | 0.816041 | 6.785377e-52 | -8.615850e-47 |
Msa0381370 | Msa1405040 | 0.819430 | 1.166129e-52 | -8.615850e-47 |
Msa0381370 | Msa1409360 | 0.812639 | 3.832100e-51 | -8.615850e-47 |
Msa0381370 | Msa1412450 | 0.801965 | 7.018849e-49 | -8.615850e-47 |
Msa0381370 | Msa1415120 | 0.824732 | 6.880322e-54 | -8.615850e-47 |
Msa0381370 | Msa1421490 | 0.816242 | 6.117194e-52 | -8.615850e-47 |
Msa0381370 | Msa1422820 | 0.927248 | 1.530770e-91 | -8.615850e-47 |
Msa0381370 | Msa1425630 | 0.819161 | 1.342951e-52 | -8.615850e-47 |
Msa0381370 | Msa1426690 | 0.808688 | 2.739067e-50 | -8.615850e-47 |
Msa0381370 | Msa1427900 | 0.803214 | 3.878322e-49 | -8.615850e-47 |
Msa0381370 | Msa1433060 | 0.815480 | 9.045664e-52 | -8.615850e-47 |
Msa0381370 | Msa1448410 | 0.825560 | 4.385577e-54 | -8.615850e-47 |
Msa0381370 | Msa1451310 | 0.836379 | 9.686212e-57 | -8.615850e-47 |
Msa0381370 | Msa1452200 | 0.814670 | 1.368937e-51 | -8.615850e-47 |
Msa0381370 | Msa1454940 | 0.825611 | 4.265288e-54 | -8.615850e-47 |
Msa0239610 | Msa0381370 | 0.800573 | 1.352458e-48 | -8.615850e-47 |
Msa0240460 | Msa0381370 | 0.827333 | 1.657431e-54 | -8.615850e-47 |
Msa0244370 | Msa0381370 | 0.801149 | 1.031767e-48 | -8.615850e-47 |
Msa0256170 | Msa0381370 | 0.850913 | 1.248073e-60 | -8.615850e-47 |
Msa0258280 | Msa0381370 | 0.808082 | 3.688376e-50 | -8.615850e-47 |
Msa0261020 | Msa0381370 | 0.808148 | 3.571104e-50 | -8.615850e-47 |
Msa0261200 | Msa0381370 | 0.839590 | 1.446823e-57 | -8.615850e-47 |
Msa0264020 | Msa0381370 | 0.817332 | 3.483288e-52 | -8.615850e-47 |
Msa0273310 | Msa0381370 | 0.811127 | 8.178206e-51 | -8.615850e-47 |
Msa0282880 | Msa0381370 | 0.818056 | 2.392453e-52 | -8.615850e-47 |
Msa0297320 | Msa0381370 | 0.804758 | 1.851985e-49 | -8.615850e-47 |
Msa0298590 | Msa0381370 | 0.832786 | 7.749257e-56 | -8.615850e-47 |
Msa0302020 | Msa0381370 | 0.833883 | 4.128680e-56 | -8.615850e-47 |
Msa0313580 | Msa0381370 | 0.843771 | 1.141671e-58 | -8.615850e-47 |
Msa0321180 | Msa0381370 | 0.815879 | 7.371743e-52 | -8.615850e-47 |
Msa0321200 | Msa0381370 | 0.818216 | 2.201220e-52 | -8.615850e-47 |
Msa0336550 | Msa0381370 | 0.813537 | 2.434474e-51 | -8.615850e-47 |
Msa0336730 | Msa0381370 | 0.801983 | 6.959745e-49 | -8.615850e-47 |
Msa0338900 | Msa0381370 | 0.819252 | 1.280208e-52 | -8.615850e-47 |
Msa0339340 | Msa0381370 | 0.821404 | 4.111775e-53 | -8.615850e-47 |
Msa0351930 | Msa0381370 | 0.804027 | 2.630295e-49 | -8.615850e-47 |
Msa0364010 | Msa0381370 | 0.814236 | 1.707586e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381370 | MtrunA17_Chr3g0134981 | 96.659 | 449 | 15 | 0 | 1 | 449 | 1 | 449 | 0.0 | 895 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0381370 | AT1G27480.1 | 59.059 | 425 | 164 | 4 | 10 | 431 | 4 | 421 | 0.0 | 518 |
Find 95 sgRNAs with CRISPR-Local
Find 197 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTTAGGTCGTTTAGGAATT+TGG | 0.093532 | 3_1:+83441394 | None:intergenic |
AAAATGGATGGTTTAGATTA+TGG | 0.209097 | 3_1:-83442901 | Msa0381370:CDS |
AAAATTAAATTTGCAGATAA+TGG | 0.219301 | 3_1:+83440537 | None:intergenic |
AAGAAGAAGGGTTTCGATTA+AGG | 0.254545 | 3_1:+83441282 | None:intergenic |
GTTGCACTTGATGAAATAAT+TGG | 0.291740 | 3_1:-83440696 | Msa0381370:CDS |
TTAATCGAAACCCTTCTTCT+TGG | 0.309291 | 3_1:-83441280 | Msa0381370:CDS |
TCAAATTCTTTAGGTCGTTT+AGG | 0.309491 | 3_1:+83441387 | None:intergenic |
TTATCAATATCAAATATCTT+AGG | 0.316150 | 3_1:+83441086 | None:intergenic |
TGTTGGCACTTGAATCTCTA+TGG | 0.323866 | 3_1:-83440794 | Msa0381370:CDS |
CTTTGTTTCTAGTGAAGCTT+TGG | 0.328266 | 3_1:+83443181 | None:intergenic |
CTCATGCTCAACTTGATTTG+AGG | 0.335869 | 3_1:-83440653 | Msa0381370:CDS |
ATACCATGGATCACAAATTA+AGG | 0.343972 | 3_1:+83442940 | None:intergenic |
TGCGCTAAATAGCTTCTATA+TGG | 0.354848 | 3_1:+83441047 | None:intergenic |
CTGTGTGAGACAAGTATTAC+TGG | 0.359637 | 3_1:+83441332 | None:intergenic |
GGTAGAAGGTTTATATTTAG+TGG | 0.367636 | 3_1:+83442961 | None:intergenic |
GGATCACAAATTAAGGTAGA+AGG | 0.371811 | 3_1:+83442947 | None:intergenic |
GTTGTTGTTGCTTGTGCTAA+TGG | 0.373911 | 3_1:+83443042 | None:intergenic |
GTGCGTATGACTTGTATTAT+AGG | 0.376436 | 3_1:-83440924 | Msa0381370:CDS |
ATATGAGTTGCATATTTAGT+AGG | 0.380193 | 3_1:+83443241 | None:intergenic |
AAGCTATTTAGCGCATGATA+TGG | 0.385056 | 3_1:-83441039 | Msa0381370:CDS |
TTTGCATCAGGCAATACTTT+GGG | 0.393921 | 3_1:-83441185 | Msa0381370:CDS |
GAACAGCTTGGTTACATAGA+TGG | 0.397233 | 3_1:-83441491 | Msa0381370:CDS |
TAGACCATATCGAAAATCAT+AGG | 0.397497 | 3_1:+83441448 | None:intergenic |
TACTTGAAAGTTATTAAGAT+TGG | 0.398069 | 3_1:-83440753 | Msa0381370:CDS |
ATAGATGGTGAAAATCTGTT+TGG | 0.403610 | 3_1:-83441476 | Msa0381370:CDS |
TTATAGCACTTTCTGCTCCA+TGG | 0.410868 | 3_1:-83441235 | Msa0381370:CDS |
ATATCAAATATCTTAGGATT+AGG | 0.419667 | 3_1:+83441092 | None:intergenic |
CTACCTTAATTTGTGATCCA+TGG | 0.426147 | 3_1:-83442943 | Msa0381370:CDS |
ACTAGCAAAGGGTTTACTAA+TGG | 0.433212 | 3_1:+83441158 | None:intergenic |
GAGACACGTGTCCCTAGCTT+TGG | 0.437492 | 3_1:-83442773 | Msa0381370:CDS |
TATAGCACTTTCTGCTCCAT+GGG | 0.439917 | 3_1:-83441234 | Msa0381370:CDS |
TATTACTGGCTTCCCTCCAT+TGG | 0.440820 | 3_1:+83441346 | None:intergenic |
CTGTTCTAATGATTCTACTA+AGG | 0.448413 | 3_1:+83441508 | None:intergenic |
GGTAAAATGCGAGTTTCATA+AGG | 0.448911 | 3_1:+83440975 | None:intergenic |
AGTTGGTTCCCTCCATTACC+TGG | 0.449098 | 3_1:+83442998 | None:intergenic |
TTCCTATAAAACAATTCCTC+TGG | 0.453117 | 3_1:+83440885 | None:intergenic |
AATTTCTTGCGCCAAGAAGA+AGG | 0.458486 | 3_1:+83441269 | None:intergenic |
GTTCATTTCTTACTAGCAAA+GGG | 0.458490 | 3_1:+83441147 | None:intergenic |
ATACAAGTCATACGCACTTC+CGG | 0.459063 | 3_1:+83440930 | None:intergenic |
TTACCTGGTATTAGTATCAC+TGG | 0.464879 | 3_1:+83443013 | None:intergenic |
CATACGAGAAGCAAAACATT+TGG | 0.473192 | 3_1:+83442847 | None:intergenic |
TGAAAGTTATTAAGATTGGT+GGG | 0.480822 | 3_1:-83440749 | Msa0381370:CDS |
TGTTCATTTCTTACTAGCAA+AGG | 0.481119 | 3_1:+83441146 | None:intergenic |
TTGAAAGTTATTAAGATTGG+TGG | 0.484679 | 3_1:-83440750 | Msa0381370:CDS |
TACTTGTGTAGGCTTGTCAC+AGG | 0.491877 | 3_1:-83441542 | Msa0381370:intron |
ATACTTGTCTCACACAGCTT+AGG | 0.493585 | 3_1:-83441326 | Msa0381370:CDS |
CTTGTCTCACACAGCTTAGG+AGG | 0.497176 | 3_1:-83441323 | Msa0381370:CDS |
GAGGAAGTAGAACCAAAGCT+AGG | 0.502927 | 3_1:+83442761 | None:intergenic |
GTAGAATCATTAGAACAGCT+TGG | 0.503633 | 3_1:-83441503 | Msa0381370:CDS |
GTGATACTAATACCAGGTAA+TGG | 0.511981 | 3_1:-83443010 | Msa0381370:CDS |
AATTTGGAACCAACTTGAGA+TGG | 0.518350 | 3_1:+83441410 | None:intergenic |
TGTGAACATGGTGAGCTTGT+TGG | 0.520209 | 3_1:-83440811 | Msa0381370:CDS |
CCATCACCATAAGAAAACTC+TGG | 0.520727 | 3_1:+83440843 | None:intergenic |
CTACAATTTCAAAACATCAA+TGG | 0.521982 | 3_1:+83440434 | None:intergenic |
CGATATGGTCTAGCTGCACC+AGG | 0.525375 | 3_1:-83441437 | Msa0381370:CDS |
ATGACTTGTATTATAGGAAA+GGG | 0.531822 | 3_1:-83440918 | Msa0381370:CDS |
GGGACACGTGTCTCCACTCC+AGG | 0.536426 | 3_1:+83442782 | None:intergenic |
CATCACCATAAGAAAACTCT+GGG | 0.540159 | 3_1:+83440844 | None:intergenic |
TTCTTGAAAGGAGGATACCA+TGG | 0.540741 | 3_1:+83442926 | None:intergenic |
CACTAACAGTGTTAATGTGT+TGG | 0.541443 | 3_1:+83443096 | None:intergenic |
GTATTAGTATCACTGGATTG+AGG | 0.543116 | 3_1:+83443020 | None:intergenic |
ATTTGGAACCAACTTGAGAT+GGG | 0.545508 | 3_1:+83441411 | None:intergenic |
ATTTCTTGCGCCAAGAAGAA+GGG | 0.548066 | 3_1:+83441270 | None:intergenic |
TATGACTTGTATTATAGGAA+AGG | 0.548615 | 3_1:-83440919 | Msa0381370:CDS |
TAGGATTAGGCAAAAGCCAT+AGG | 0.550005 | 3_1:+83441105 | None:intergenic |
TAGGCTTGTCACAGGGTACA+TGG | 0.553390 | 3_1:-83441534 | Msa0381370:CDS |
TCATCAACAGTTCCACCCCA+TGG | 0.553701 | 3_1:+83441218 | None:intergenic |
GATAGCGAAAATAGATGCAC+CGG | 0.558129 | 3_1:-83440949 | Msa0381370:CDS |
GAAAGTTATTAAGATTGGTG+GGG | 0.564534 | 3_1:-83440748 | Msa0381370:CDS |
GAAGCAAAACATTTGGTGAA+AGG | 0.565167 | 3_1:+83442854 | None:intergenic |
AAAGCTAGTACTTGATGCGA+TGG | 0.565432 | 3_1:-83440570 | Msa0381370:three_prime_UTR |
TGTTCTAATGATTCTACTAA+GGG | 0.567395 | 3_1:+83441509 | None:intergenic |
GCACTTTCTGCTCCATGGGG+TGG | 0.574507 | 3_1:-83441230 | Msa0381370:CDS |
AGGAAGTAGAACCAAAGCTA+GGG | 0.574724 | 3_1:+83442762 | None:intergenic |
AGACCATATCGAAAATCATA+GGG | 0.574772 | 3_1:+83441449 | None:intergenic |
GCTTGTGCTAATGGCAACAT+TGG | 0.575689 | 3_1:+83443051 | None:intergenic |
AGGATTAAGATAAAGAAGAG+AGG | 0.580569 | 3_1:+83442742 | None:intergenic |
CACATTAACACTGTTAGTGA+TGG | 0.588711 | 3_1:-83443092 | Msa0381370:CDS |
GAACTTCTGAGAGTAACCTA+TGG | 0.593616 | 3_1:-83441121 | Msa0381370:CDS |
CCAACTTGAGATGGGTGACC+TGG | 0.599702 | 3_1:+83441419 | None:intergenic |
ATACTAATACCAGGTAATGG+AGG | 0.600946 | 3_1:-83443007 | Msa0381370:CDS |
AAAGCAAGCAATTCCAATGG+AGG | 0.603247 | 3_1:-83441359 | Msa0381370:CDS |
CCAGGTCACCCATCTCAAGT+TGG | 0.608401 | 3_1:-83441419 | Msa0381370:CDS |
TGGTGACGGAACTGTGAACA+TGG | 0.612065 | 3_1:-83440823 | Msa0381370:CDS |
ACTTGTGTAGGCTTGTCACA+GGG | 0.624634 | 3_1:-83441541 | Msa0381370:intron |
AAGCAAGCAATTCCAATGGA+GGG | 0.626020 | 3_1:-83441358 | Msa0381370:CDS |
TACTAATACCAGGTAATGGA+GGG | 0.631997 | 3_1:-83443006 | Msa0381370:CDS |
TGTTTCGTTTCACTCAAACA+TGG | 0.636137 | 3_1:+83443208 | None:intergenic |
ATAGCACTTTCTGCTCCATG+GGG | 0.637994 | 3_1:-83441233 | Msa0381370:CDS |
AATCCAGTGATACTAATACC+AGG | 0.663374 | 3_1:-83443016 | Msa0381370:CDS |
AAATAAACTTACTTAAGACG+AGG | 0.677738 | 3_1:+83442722 | None:intergenic |
TCACCATAAGAAAACTCTGG+GGG | 0.705714 | 3_1:+83440846 | None:intergenic |
CATTTGATGAGAAATGATCG+TGG | 0.720069 | 3_1:-83440614 | Msa0381370:exon |
AAAGGGTGTGAAGACTCCAG+AGG | 0.728760 | 3_1:-83440901 | Msa0381370:CDS |
ATCACCATAAGAAAACTCTG+GGG | 0.774332 | 3_1:+83440845 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTTATCTTTCAATTATTATA+TGG | - | chr3_1:83441678-83441697 | Msa0381370:intron | 10.0% |
!! | TTATCTTTCAATTATTATAT+GGG | - | chr3_1:83441679-83441698 | Msa0381370:intron | 10.0% |
!! | TTCTATAAAAAGTTATTATA+TGG | - | chr3_1:83442060-83442079 | Msa0381370:intron | 10.0% |
!! | AGGAAATAAAACAAAATTTA+AGG | + | chr3_1:83440970-83440989 | None:intergenic | 15.0% |
!! | TTATCAATATCAAATATCTT+AGG | + | chr3_1:83442566-83442585 | None:intergenic | 15.0% |
!! | AAAATTAAATTTGCAGATAA+TGG | + | chr3_1:83443115-83443134 | None:intergenic | 15.0% |
!!! | TGACATTTTATTATTGATAT+AGG | - | chr3_1:83443151-83443170 | Msa0381370:five_prime_UTR | 15.0% |
!!! | TTTTTTTTTTATCGTGATGA+AGG | - | chr3_1:83440506-83440525 | Msa0381370:three_prime_UTR | 20.0% |
!! | ATTAAAGTTTCACTAAATCA+AGG | + | chr3_1:83441080-83441099 | None:intergenic | 20.0% |
!!! | ATTCATGTTTGTCTTTTTTT+AGG | - | chr3_1:83441256-83441275 | Msa0381370:CDS | 20.0% |
!!! | AATTTTTTTTTGGTGTTAAC+CGG | + | chr3_1:83441484-83441503 | None:intergenic | 20.0% |
!!! | AAAAGTGTCTTTTTTTTCTT+TGG | + | chr3_1:83441898-83441917 | None:intergenic | 20.0% |
!! | TTTACATCTATATAAAGCTA+CGG | - | chr3_1:83441916-83441935 | Msa0381370:intron | 20.0% |
!! | AACATTACTGTATTATTGTA+AGG | + | chr3_1:83442088-83442107 | None:intergenic | 20.0% |
!!! | CTTTTTCTATCAAATTCTTT+AGG | + | chr3_1:83442274-83442293 | None:intergenic | 20.0% |
!! | ATATCAAATATCTTAGGATT+AGG | + | chr3_1:83442560-83442579 | None:intergenic | 20.0% |
!!! | GTTGATTTTCTTAAAGATAT+TGG | - | chr3_1:83442632-83442651 | Msa0381370:intron | 20.0% |
!! | TACTTGAAAGTTATTAAGAT+TGG | - | chr3_1:83442896-83442915 | Msa0381370:CDS | 20.0% |
! | AAAATGGATGGTTTAGATTA+TGG | - | chr3_1:83440748-83440767 | Msa0381370:CDS | 25.0% |
! | GTGCATTAAAAAAATCATCA+AGG | + | chr3_1:83440848-83440867 | None:intergenic | 25.0% |
! | AAATAAACTTACTTAAGACG+AGG | + | chr3_1:83440930-83440949 | None:intergenic | 25.0% |
!!! | TTATTTCCTGTACTTTGTTT+TGG | - | chr3_1:83440981-83441000 | Msa0381370:CDS | 25.0% |
! | ATATTATCAAATTAGTCCGA+AGG | + | chr3_1:83441294-83441313 | None:intergenic | 25.0% |
! | AAAAGATTTAACATTGCTCA+TGG | + | chr3_1:83441390-83441409 | None:intergenic | 25.0% |
!! | ATGAGCAATGTTAAATCTTT+TGG | - | chr3_1:83441389-83441408 | Msa0381370:CDS | 25.0% |
!! | TGAGCAATGTTAAATCTTTT+GGG | - | chr3_1:83441390-83441409 | Msa0381370:CDS | 25.0% |
!!! | ATTTTTTTTTGGTGTTAACC+GGG | + | chr3_1:83441483-83441502 | None:intergenic | 25.0% |
! | GACGAGAAATTATAAATTGT+TGG | + | chr3_1:83441549-83441568 | None:intergenic | 25.0% |
! | CTTTCAATTATTATATGGGA+AGG | - | chr3_1:83441683-83441702 | Msa0381370:intron | 25.0% |
!!! | ATCTAGAAAAGTGTTCATAT+AGG | + | chr3_1:83441739-83441758 | None:intergenic | 25.0% |
!! | CTTTTCTAGATAGATTGAAT+CGG | - | chr3_1:83441748-83441767 | Msa0381370:intron | 25.0% |
! | TGTTCTAATGATTCTACTAA+GGG | + | chr3_1:83442143-83442162 | None:intergenic | 25.0% |
!! | TATGACTTGTATTATAGGAA+AGG | - | chr3_1:83442730-83442749 | Msa0381370:intron | 25.0% |
!! | ATGACTTGTATTATAGGAAA+GGG | - | chr3_1:83442731-83442750 | Msa0381370:intron | 25.0% |
! | TTGAAAGTTATTAAGATTGG+TGG | - | chr3_1:83442899-83442918 | Msa0381370:CDS | 25.0% |
! | TGAAAGTTATTAAGATTGGT+GGG | - | chr3_1:83442900-83442919 | Msa0381370:CDS | 25.0% |
! | CTACAATTTCAAAACATCAA+TGG | + | chr3_1:83443218-83443237 | None:intergenic | 25.0% |
!!! | GTGAGTTTTGATATTAAGAA+TGG | - | chr3_1:83443237-83443256 | Msa0381370:five_prime_UTR | 25.0% |
GGTAGAAGGTTTATATTTAG+TGG | + | chr3_1:83440691-83440710 | None:intergenic | 30.0% | |
ATACCATGGATCACAAATTA+AGG | + | chr3_1:83440712-83440731 | None:intergenic | 30.0% | |
!! | CATCCATTTTTCTTCTTGAA+AGG | + | chr3_1:83440738-83440757 | None:intergenic | 30.0% |
CTTTCAAGAAGAAAAATGGA+TGG | - | chr3_1:83440736-83440755 | Msa0381370:CDS | 30.0% | |
!!! | GATGATTTTTTTAATGCACC+TGG | - | chr3_1:83440849-83440868 | Msa0381370:CDS | 30.0% |
AGGATTAAGATAAAGAAGAG+AGG | + | chr3_1:83440910-83440929 | None:intergenic | 30.0% | |
AAACTTCCAAAACAAAGTAC+AGG | + | chr3_1:83440990-83441009 | None:intergenic | 30.0% | |
CATTATGAGATCATCCAATT+TGG | - | chr3_1:83441040-83441059 | Msa0381370:CDS | 30.0% | |
ATAATAACTAGAGCTCATGA+TGG | + | chr3_1:83441163-83441182 | None:intergenic | 30.0% | |
! | TAGGCTAAGTTTTTAACCTT+CGG | - | chr3_1:83441275-83441294 | Msa0381370:CDS | 30.0% |
! | GAGCAATGTTAAATCTTTTG+GGG | - | chr3_1:83441391-83441410 | Msa0381370:CDS | 30.0% |
! | AGCAATGTTAAATCTTTTGG+GGG | - | chr3_1:83441392-83441411 | Msa0381370:CDS | 30.0% |
TGCTAAAAGACTATACTGTT+TGG | - | chr3_1:83441513-83441532 | Msa0381370:CDS | 30.0% | |
TAATTTCTCGTCAATTTCGT+AGG | - | chr3_1:83441557-83441576 | Msa0381370:intron | 30.0% | |
TTAGAACCTTGAAATTGTAG+GGG | + | chr3_1:83441604-83441623 | None:intergenic | 30.0% | |
GTTAGAACCTTGAAATTGTA+GGG | + | chr3_1:83441605-83441624 | None:intergenic | 30.0% | |
!!! | AGTGTCTTTTTTTTCTTTGG+TGG | + | chr3_1:83441895-83441914 | None:intergenic | 30.0% |
! | TACAGTAATGTTACTTGTGT+AGG | - | chr3_1:83442096-83442115 | Msa0381370:intron | 30.0% |
CTGTTCTAATGATTCTACTA+AGG | + | chr3_1:83442144-83442163 | None:intergenic | 30.0% | |
ATAGATGGTGAAAATCTGTT+TGG | - | chr3_1:83442173-83442192 | Msa0381370:intron | 30.0% | |
AGACCATATCGAAAATCATA+GGG | + | chr3_1:83442203-83442222 | None:intergenic | 30.0% | |
TAGACCATATCGAAAATCAT+AGG | + | chr3_1:83442204-83442223 | None:intergenic | 30.0% | |
TCAAATTCTTTAGGTCGTTT+AGG | + | chr3_1:83442265-83442284 | None:intergenic | 30.0% | |
!! | GAAATGTTTACTTTTGCATC+AGG | - | chr3_1:83442452-83442471 | Msa0381370:intron | 30.0% |
GTTCATTTCTTACTAGCAAA+GGG | + | chr3_1:83442505-83442524 | None:intergenic | 30.0% | |
TGTTCATTTCTTACTAGCAA+AGG | + | chr3_1:83442506-83442525 | None:intergenic | 30.0% | |
!!! | TAAAGATATTGGTTTTCCTG+AGG | - | chr3_1:83442643-83442662 | Msa0381370:intron | 30.0% |
!!! | AAAGATATTGGTTTTCCTGA+GGG | - | chr3_1:83442644-83442663 | Msa0381370:intron | 30.0% |
TTCCTATAAAACAATTCCTC+TGG | + | chr3_1:83442767-83442786 | None:intergenic | 30.0% | |
!! | GAGGAATTGTTTTATAGGAA+TGG | - | chr3_1:83442767-83442786 | Msa0381370:CDS | 30.0% |
GAAAGTTATTAAGATTGGTG+GGG | - | chr3_1:83442901-83442920 | Msa0381370:CDS | 30.0% | |
GTTGCACTTGATGAAATAAT+TGG | - | chr3_1:83442953-83442972 | Msa0381370:CDS | 30.0% | |
TGTTTCGTTTCACTCAAACA+TGG | + | chr3_1:83440444-83440463 | None:intergenic | 35.0% | |
!! | CTTTGTTTCTAGTGAAGCTT+TGG | + | chr3_1:83440471-83440490 | None:intergenic | 35.0% |
CACTAACAGTGTTAATGTGT+TGG | + | chr3_1:83440556-83440575 | None:intergenic | 35.0% | |
CACATTAACACTGTTAGTGA+TGG | - | chr3_1:83440557-83440576 | Msa0381370:three_prime_UTR | 35.0% | |
GTATTAGTATCACTGGATTG+AGG | + | chr3_1:83440632-83440651 | None:intergenic | 35.0% | |
AATCCAGTGATACTAATACC+AGG | - | chr3_1:83440633-83440652 | Msa0381370:CDS | 35.0% | |
TTACCTGGTATTAGTATCAC+TGG | + | chr3_1:83440639-83440658 | None:intergenic | 35.0% | |
GTGATACTAATACCAGGTAA+TGG | - | chr3_1:83440639-83440658 | Msa0381370:CDS | 35.0% | |
! | ATACTAATACCAGGTAATGG+AGG | - | chr3_1:83440642-83440661 | Msa0381370:CDS | 35.0% |
!! | TACTAATACCAGGTAATGGA+GGG | - | chr3_1:83440643-83440662 | Msa0381370:CDS | 35.0% |
!!! | TGGTTAGTTTTGCTTCTAGT+TGG | + | chr3_1:83440671-83440690 | None:intergenic | 35.0% |
GGATCACAAATTAAGGTAGA+AGG | + | chr3_1:83440705-83440724 | None:intergenic | 35.0% | |
!! | CTACCTTAATTTGTGATCCA+TGG | - | chr3_1:83440706-83440725 | Msa0381370:CDS | 35.0% |
!! | CCATTTTTCTTCTTGAAAGG+AGG | + | chr3_1:83440735-83440754 | None:intergenic | 35.0% |
CCTCCTTTCAAGAAGAAAAA+TGG | - | chr3_1:83440732-83440751 | Msa0381370:CDS | 35.0% | |
! | GAAGCAAAACATTTGGTGAA+AGG | + | chr3_1:83440798-83440817 | None:intergenic | 35.0% |
CATACGAGAAGCAAAACATT+TGG | + | chr3_1:83440805-83440824 | None:intergenic | 35.0% | |
!!! | TTTTTTTAATGCACCTGGAG+TGG | - | chr3_1:83440854-83440873 | Msa0381370:CDS | 35.0% |
AGATCATCCAATTTGGTTGT+GGG | - | chr3_1:83441047-83441066 | Msa0381370:CDS | 35.0% | |
GTTTCACTAAATCAAGGACT+TGG | + | chr3_1:83441074-83441093 | None:intergenic | 35.0% | |
ACAATACCCCTACAATTTCA+AGG | - | chr3_1:83441595-83441614 | Msa0381370:intron | 35.0% | |
GGTTAGAACCTTGAAATTGT+AGG | + | chr3_1:83441606-83441625 | None:intergenic | 35.0% | |
! | ACAATTTCAAGGTTCTAACC+TGG | - | chr3_1:83441606-83441625 | Msa0381370:intron | 35.0% |
TTATCAATGAGTGTATCACC+AGG | + | chr3_1:83441627-83441646 | None:intergenic | 35.0% | |
GACAGTGCATAAAATATGCA+AGG | - | chr3_1:83441854-83441873 | Msa0381370:intron | 35.0% | |
!!! | GTCTTTTTTTTCTTTGGTGG+TGG | + | chr3_1:83441892-83441911 | None:intergenic | 35.0% |
TGCATTAATCAGTGTTCTCA+TGG | - | chr3_1:83442003-83442022 | Msa0381370:intron | 35.0% | |
ATTAATCAGTGTTCTCATGG+CGG | - | chr3_1:83442006-83442025 | Msa0381370:intron | 35.0% | |
GTAGAATCATTAGAACAGCT+TGG | - | chr3_1:83442146-83442165 | Msa0381370:intron | 35.0% | |
! | ATTTGGAACCAACTTGAGAT+GGG | + | chr3_1:83442241-83442260 | None:intergenic | 35.0% |
! | AATTTGGAACCAACTTGAGA+TGG | + | chr3_1:83442242-83442261 | None:intergenic | 35.0% |
CTTTAGGTCGTTTAGGAATT+TGG | + | chr3_1:83442258-83442277 | None:intergenic | 35.0% | |
GAAAAAGCAAGCAATTCCAA+TGG | - | chr3_1:83442287-83442306 | Msa0381370:intron | 35.0% | |
AAGAAGAAGGGTTTCGATTA+AGG | + | chr3_1:83442370-83442389 | None:intergenic | 35.0% | |
TTAATCGAAACCCTTCTTCT+TGG | - | chr3_1:83442369-83442388 | Msa0381370:intron | 35.0% | |
! | TTTTGCATCAGGCAATACTT+TGG | - | chr3_1:83442463-83442482 | Msa0381370:intron | 35.0% |
TTTGCATCAGGCAATACTTT+GGG | - | chr3_1:83442464-83442483 | Msa0381370:intron | 35.0% | |
ACTAGCAAAGGGTTTACTAA+TGG | + | chr3_1:83442494-83442513 | None:intergenic | 35.0% | |
TGCGCTAAATAGCTTCTATA+TGG | + | chr3_1:83442605-83442624 | None:intergenic | 35.0% | |
AAGCTATTTAGCGCATGATA+TGG | - | chr3_1:83442610-83442629 | Msa0381370:intron | 35.0% | |
!!! | AAGATATTGGTTTTCCTGAG+GGG | - | chr3_1:83442645-83442664 | Msa0381370:intron | 35.0% |
GGTAAAATGCGAGTTTCATA+AGG | + | chr3_1:83442677-83442696 | None:intergenic | 35.0% | |
! | GCATCTATTTTCGCTATCAA+AGG | + | chr3_1:83442698-83442717 | None:intergenic | 35.0% |
! | GTGCGTATGACTTGTATTAT+AGG | - | chr3_1:83442725-83442744 | Msa0381370:intron | 35.0% |
!! | CTCCAGAGGAATTGTTTTAT+AGG | - | chr3_1:83442762-83442781 | Msa0381370:CDS | 35.0% |
ATCACCATAAGAAAACTCTG+GGG | + | chr3_1:83442807-83442826 | None:intergenic | 35.0% | |
CATCACCATAAGAAAACTCT+GGG | + | chr3_1:83442808-83442827 | None:intergenic | 35.0% | |
!!! | TTTTCTTATGGTGATGGTGA+CGG | - | chr3_1:83442812-83442831 | Msa0381370:CDS | 35.0% |
CATTTGATGAGAAATGATCG+TGG | - | chr3_1:83443035-83443054 | Msa0381370:CDS | 35.0% | |
! | GTTGTTGTTGCTTGTGCTAA+TGG | + | chr3_1:83440610-83440629 | None:intergenic | 40.0% |
TTCTTGAAAGGAGGATACCA+TGG | + | chr3_1:83440726-83440745 | None:intergenic | 40.0% | |
AGGAAGTAGAACCAAAGCTA+GGG | + | chr3_1:83440890-83440909 | None:intergenic | 40.0% | |
GAGATCATCCAATTTGGTTG+TGG | - | chr3_1:83441046-83441065 | Msa0381370:CDS | 40.0% | |
CGATCGAATTGACAAACTCA+CGG | + | chr3_1:83441123-83441142 | None:intergenic | 40.0% | |
! | AGAGCTCATGATGGAAAGTT+TGG | + | chr3_1:83441154-83441173 | None:intergenic | 40.0% |
TTCAGCTTAACCAAAGATCC+TGG | - | chr3_1:83441353-83441372 | Msa0381370:CDS | 40.0% | |
TAGATTCGAACCAGGATCTT+TGG | + | chr3_1:83441366-83441385 | None:intergenic | 40.0% | |
TACAAAGACTAATCCCTCGA+AGG | + | chr3_1:83441441-83441460 | None:intergenic | 40.0% | |
TGGGAAGGAATATAATGCAG+TGG | - | chr3_1:83441698-83441717 | Msa0381370:intron | 40.0% | |
!!! | TTTTTTTCTTTGGTGGTGGC+CGG | + | chr3_1:83441888-83441907 | None:intergenic | 40.0% |
!! | TTCTCATGGCGGACAAAATA+GGG | - | chr3_1:83442017-83442036 | Msa0381370:intron | 40.0% |
GAACAGCTTGGTTACATAGA+TGG | - | chr3_1:83442158-83442177 | Msa0381370:intron | 40.0% | |
! | GCTCCCTATGATTTTCGATA+TGG | - | chr3_1:83442197-83442216 | Msa0381370:intron | 40.0% |
AAAGCAAGCAATTCCAATGG+AGG | - | chr3_1:83442290-83442309 | Msa0381370:intron | 40.0% | |
AAGCAAGCAATTCCAATGGA+GGG | - | chr3_1:83442291-83442310 | Msa0381370:intron | 40.0% | |
CTGTGTGAGACAAGTATTAC+TGG | + | chr3_1:83442320-83442339 | None:intergenic | 40.0% | |
ATACTTGTCTCACACAGCTT+AGG | - | chr3_1:83442323-83442342 | Msa0381370:intron | 40.0% | |
ATTTCTTGCGCCAAGAAGAA+GGG | + | chr3_1:83442382-83442401 | None:intergenic | 40.0% | |
AATTTCTTGCGCCAAGAAGA+AGG | + | chr3_1:83442383-83442402 | None:intergenic | 40.0% | |
TTATAGCACTTTCTGCTCCA+TGG | - | chr3_1:83442414-83442433 | Msa0381370:intron | 40.0% | |
TATAGCACTTTCTGCTCCAT+GGG | - | chr3_1:83442415-83442434 | Msa0381370:intron | 40.0% | |
! | GAACTTCTGAGAGTAACCTA+TGG | - | chr3_1:83442528-83442547 | Msa0381370:intron | 40.0% |
TAGGATTAGGCAAAAGCCAT+AGG | + | chr3_1:83442547-83442566 | None:intergenic | 40.0% | |
!!! | AGATATTGGTTTTCCTGAGG+GGG | - | chr3_1:83442646-83442665 | Msa0381370:intron | 40.0% |
GATAGCGAAAATAGATGCAC+CGG | - | chr3_1:83442700-83442719 | Msa0381370:intron | 40.0% | |
ATACAAGTCATACGCACTTC+CGG | + | chr3_1:83442722-83442741 | None:intergenic | 40.0% | |
TCACCATAAGAAAACTCTGG+GGG | + | chr3_1:83442806-83442825 | None:intergenic | 40.0% | |
CCATCACCATAAGAAAACTC+TGG | + | chr3_1:83442809-83442828 | None:intergenic | 40.0% | |
! | CCAGAGTTTTCTTATGGTGA+TGG | - | chr3_1:83442806-83442825 | Msa0381370:CDS | 40.0% |
TGTTGGCACTTGAATCTCTA+TGG | - | chr3_1:83442855-83442874 | Msa0381370:CDS | 40.0% | |
! | CTCATGCTCAACTTGATTTG+AGG | - | chr3_1:83442996-83443015 | Msa0381370:CDS | 40.0% |
AAAGCTAGTACTTGATGCGA+TGG | - | chr3_1:83443079-83443098 | Msa0381370:CDS | 40.0% | |
GCTTGTGCTAATGGCAACAT+TGG | + | chr3_1:83440601-83440620 | None:intergenic | 45.0% | |
GAGGAAGTAGAACCAAAGCT+AGG | + | chr3_1:83440891-83440910 | None:intergenic | 45.0% | |
ACTTGGTCCCACAACCAAAT+TGG | + | chr3_1:83441057-83441076 | None:intergenic | 45.0% | |
! | GCTCATGATGGAAAGTTTGG+TGG | + | chr3_1:83441151-83441170 | None:intergenic | 45.0% |
!! | GCAAGAGCGTTTGAATGAGA+TGG | - | chr3_1:83441318-83441337 | Msa0381370:CDS | 45.0% |
CTTTGTATAGTTGCGTGCAG+AGG | - | chr3_1:83441454-83441473 | Msa0381370:CDS | 45.0% | |
AATATGCAAGGTTCGAACCC+CGG | - | chr3_1:83441866-83441885 | Msa0381370:intron | 45.0% | |
!!! | TTTTTTCTTTGGTGGTGGCC+GGG | + | chr3_1:83441887-83441906 | None:intergenic | 45.0% |
!! | GTTCTCATGGCGGACAAAAT+AGG | - | chr3_1:83442016-83442035 | Msa0381370:intron | 45.0% |
TACTTGTGTAGGCTTGTCAC+AGG | - | chr3_1:83442107-83442126 | Msa0381370:intron | 45.0% | |
ACTTGTGTAGGCTTGTCACA+GGG | - | chr3_1:83442108-83442127 | Msa0381370:intron | 45.0% | |
!! | TATTACTGGCTTCCCTCCAT+TGG | + | chr3_1:83442306-83442325 | None:intergenic | 45.0% |
ATAGCACTTTCTGCTCCATG+GGG | - | chr3_1:83442416-83442435 | Msa0381370:intron | 45.0% | |
TCATAAGGATAAACCCCCTC+AGG | + | chr3_1:83442662-83442681 | None:intergenic | 45.0% | |
TGTGAACATGGTGAGCTTGT+TGG | - | chr3_1:83442838-83442857 | Msa0381370:CDS | 45.0% | |
!! | AAAAAAAATATATAATTACT+GGG | + | chr3_1:83440494-83440513 | None:intergenic | 5.0% |
!! | AAAAAAAAATATATAATTAC+TGG | + | chr3_1:83440495-83440514 | None:intergenic | 5.0% |
!!! | AAATATTTTCAATTTTTTTT+TGG | + | chr3_1:83441494-83441513 | None:intergenic | 5.0% |
! | AGTTGGTTCCCTCCATTACC+TGG | + | chr3_1:83440654-83440673 | None:intergenic | 50.0% |
CTCATGGCTAGATTCGAACC+AGG | + | chr3_1:83441374-83441393 | None:intergenic | 50.0% | |
GAGAACTTTGCCACCCATTG+CGG | - | chr3_1:83441414-83441433 | Msa0381370:CDS | 50.0% | |
!!! | TTTTTCTTTGGTGGTGGCCG+GGG | + | chr3_1:83441886-83441905 | None:intergenic | 50.0% |
TAGGCTTGTCACAGGGTACA+TGG | - | chr3_1:83442115-83442134 | Msa0381370:intron | 50.0% | |
CTTGTCTCACACAGCTTAGG+AGG | - | chr3_1:83442326-83442345 | Msa0381370:intron | 50.0% | |
TCATCAACAGTTCCACCCCA+TGG | + | chr3_1:83442434-83442453 | None:intergenic | 50.0% | |
! | AAAGGGTGTGAAGACTCCAG+AGG | - | chr3_1:83442748-83442767 | Msa0381370:CDS | 50.0% |
! | GAGCCCCCAGAGTTTTCTTA+TGG | - | chr3_1:83442800-83442819 | Msa0381370:CDS | 50.0% |
!! | TGGTGACGGAACTGTGAACA+TGG | - | chr3_1:83442826-83442845 | Msa0381370:CDS | 50.0% |
GAGACACGTGTCCCTAGCTT+TGG | - | chr3_1:83440876-83440895 | Msa0381370:CDS | 55.0% | |
ATCCCTCGAAGGACCGCAAT+GGG | + | chr3_1:83441430-83441449 | None:intergenic | 55.0% | |
AATCCCTCGAAGGACCGCAA+TGG | + | chr3_1:83441431-83441450 | None:intergenic | 55.0% | |
AGTTGCGTGCAGAGGATACC+CGG | - | chr3_1:83441462-83441481 | Msa0381370:CDS | 55.0% | |
TGAGCCTAGCTCAGTTGGCA+GGG | - | chr3_1:83441832-83441851 | Msa0381370:intron | 55.0% | |
CGATATGGTCTAGCTGCACC+AGG | - | chr3_1:83442212-83442231 | Msa0381370:intron | 55.0% | |
CCAACTTGAGATGGGTGACC+TGG | + | chr3_1:83442233-83442252 | None:intergenic | 55.0% | |
CCAGGTCACCCATCTCAAGT+TGG | - | chr3_1:83442230-83442249 | Msa0381370:intron | 55.0% | |
CACCCATTGCGGTCCTTCGA+GGG | - | chr3_1:83441425-83441444 | Msa0381370:CDS | 60.0% | |
CCAACTGAGCTAGGCTCACG+AGG | + | chr3_1:83441830-83441849 | None:intergenic | 60.0% | |
CCTCGTGAGCCTAGCTCAGT+TGG | - | chr3_1:83441827-83441846 | Msa0381370:intron | 60.0% | |
GTGAGCCTAGCTCAGTTGGC+AGG | - | chr3_1:83441831-83441850 | Msa0381370:intron | 60.0% | |
CTGTCCCTGCCAACTGAGCT+AGG | + | chr3_1:83441839-83441858 | None:intergenic | 60.0% | |
GCACTTTCTGCTCCATGGGG+TGG | - | chr3_1:83442419-83442438 | Msa0381370:intron | 60.0% | |
GGGACACGTGTCTCCACTCC+AGG | + | chr3_1:83440870-83440889 | None:intergenic | 65.0% | |
CCTCGAAGGACCGCAATGGG+TGG | + | chr3_1:83441427-83441446 | None:intergenic | 65.0% | |
CCACCCATTGCGGTCCTTCG+AGG | - | chr3_1:83441424-83441443 | Msa0381370:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 83440411 | 83443260 | 83440411 | ID=Msa0381370;Name=Msa0381370 |
chr3_1 | mRNA | 83440411 | 83443260 | 83440411 | ID=Msa0381370-mRNA-1;Parent=Msa0381370;Name=Msa0381370-mRNA-1;_AED=0.00;_eAED=0.00;_QI=111|1|1|1|1|1|2|209|449 |
chr3_1 | exon | 83440411 | 83441553 | 83440411 | ID=Msa0381370-mRNA-1:exon:21466;Parent=Msa0381370-mRNA-1 |
chr3_1 | exon | 83442734 | 83443260 | 83442734 | ID=Msa0381370-mRNA-1:exon:21465;Parent=Msa0381370-mRNA-1 |
chr3_1 | five_prime_UTR | 83443150 | 83443260 | 83443150 | ID=Msa0381370-mRNA-1:five_prime_utr;Parent=Msa0381370-mRNA-1 |
chr3_1 | CDS | 83442734 | 83443149 | 83442734 | ID=Msa0381370-mRNA-1:cds;Parent=Msa0381370-mRNA-1 |
chr3_1 | CDS | 83440620 | 83441553 | 83440620 | ID=Msa0381370-mRNA-1:cds;Parent=Msa0381370-mRNA-1 |
chr3_1 | three_prime_UTR | 83440411 | 83440619 | 83440411 | ID=Msa0381370-mRNA-1:three_prime_utr;Parent=Msa0381370-mRNA-1 |
Gene Sequence |
Protein sequence |