Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582570 | AET02655.1 | 89.691 | 97 | 3 | 1 | 15 | 104 | 1 | 97 | 2.91e-54 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582570 | sp|B5LMP5|RK33_CICAR | 96.667 | 60 | 2 | 0 | 46 | 105 | 7 | 66 | 2.77e-37 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582570 | G7L7R4 | 89.691 | 97 | 3 | 1 | 15 | 104 | 1 | 97 | 1.39e-54 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa0582570 | 0.822213 | 2.672018e-53 | -8.615850e-47 |
| Msa0030710 | Msa0582570 | 0.816185 | 6.298554e-52 | -8.615850e-47 |
| Msa0032040 | Msa0582570 | 0.814312 | 1.642868e-51 | -8.615850e-47 |
| Msa0033600 | Msa0582570 | 0.805923 | 1.056095e-49 | -8.615850e-47 |
| Msa0033650 | Msa0582570 | 0.809040 | 2.302852e-50 | -8.615850e-47 |
| Msa0034800 | Msa0582570 | 0.840972 | 6.301413e-58 | -8.615850e-47 |
| Msa0035090 | Msa0582570 | 0.818325 | 2.079381e-52 | -8.615850e-47 |
| Msa0039200 | Msa0582570 | 0.850864 | 1.288990e-60 | -8.615850e-47 |
| Msa0040190 | Msa0582570 | 0.858807 | 6.390906e-63 | -8.615850e-47 |
| Msa0065190 | Msa0582570 | 0.840269 | 9.626626e-58 | -8.615850e-47 |
| Msa0083200 | Msa0582570 | 0.803532 | 3.332462e-49 | -8.615850e-47 |
| Msa0083570 | Msa0582570 | 0.815134 | 1.080177e-51 | -8.615850e-47 |
| Msa0084550 | Msa0582570 | 0.820611 | 6.259510e-53 | -8.615850e-47 |
| Msa0086820 | Msa0582570 | 0.848523 | 5.807316e-60 | -8.615850e-47 |
| Msa0087880 | Msa0582570 | 0.865646 | 5.078607e-65 | -8.615850e-47 |
| Msa0092750 | Msa0582570 | 0.819400 | 1.184915e-52 | -8.615850e-47 |
| Msa0095140 | Msa0582570 | 0.945166 | 5.069874e-104 | -8.615850e-47 |
| Msa0095190 | Msa0582570 | 0.811008 | 8.679159e-51 | -8.615850e-47 |
| Msa0095240 | Msa0582570 | 0.940679 | 1.544178e-100 | -8.615850e-47 |
| Msa0095270 | Msa0582570 | 0.941241 | 5.857303e-101 | -8.615850e-47 |
| Msa0099830 | Msa0582570 | 0.827895 | 1.215237e-54 | -8.615850e-47 |
| Msa0110500 | Msa0582570 | 0.809405 | 1.923360e-50 | -8.615850e-47 |
| Msa0114960 | Msa0582570 | 0.820629 | 6.200140e-53 | -8.615850e-47 |
| Msa0123940 | Msa0582570 | 0.805781 | 1.131093e-49 | -8.615850e-47 |
| Msa0124070 | Msa0582570 | 0.801954 | 7.056177e-49 | -8.615850e-47 |
| Msa0130120 | Msa0582570 | 0.821213 | 4.549059e-53 | -8.615850e-47 |
| Msa0130620 | Msa0582570 | 0.820410 | 6.961781e-53 | -8.615850e-47 |
| Msa0133670 | Msa0582570 | 0.851616 | 7.902843e-61 | -8.615850e-47 |
| Msa0133880 | Msa0582570 | 0.852109 | 5.728613e-61 | -8.615850e-47 |
| Msa0134550 | Msa0582570 | 0.864459 | 1.197358e-64 | -8.615850e-47 |
| Msa0139740 | Msa0582570 | 0.845994 | 2.869108e-59 | -8.615850e-47 |
| Msa0141670 | Msa0582570 | 0.804921 | 1.712596e-49 | -8.615850e-47 |
| Msa0148590 | Msa0582570 | 0.810167 | 1.318616e-50 | -8.615850e-47 |
| Msa0156780 | Msa0582570 | 0.865725 | 4.794443e-65 | -8.615850e-47 |
| Msa0175900 | Msa0582570 | 0.814322 | 1.634432e-51 | -8.615850e-47 |
| Msa0176530 | Msa0582570 | 0.820415 | 6.943194e-53 | -8.615850e-47 |
| Msa0181290 | Msa0582570 | 0.811123 | 8.192433e-51 | -8.615850e-47 |
| Msa0184120 | Msa0582570 | 0.853816 | 1.860375e-61 | -8.615850e-47 |
| Msa0189050 | Msa0582570 | 0.834484 | 2.918519e-56 | -8.615850e-47 |
| Msa0197600 | Msa0582570 | 0.803975 | 2.697356e-49 | -8.615850e-47 |
| Msa0201910 | Msa0582570 | 0.823505 | 1.335691e-53 | -8.615850e-47 |
| Msa0207220 | Msa0582570 | 0.815908 | 7.265458e-52 | -8.615850e-47 |
| Msa0207530 | Msa0582570 | 0.837589 | 4.753703e-57 | -8.615850e-47 |
| Msa0207900 | Msa0582570 | 0.830798 | 2.397768e-55 | -8.615850e-47 |
| Msa0218480 | Msa0582570 | 0.808276 | 3.353858e-50 | -8.615850e-47 |
| Msa0218590 | Msa0582570 | 0.808468 | 3.051713e-50 | -8.615850e-47 |
| Msa0221860 | Msa0582570 | 0.935171 | 1.289647e-96 | -8.615850e-47 |
| Msa0222510 | Msa0582570 | 0.814818 | 1.269532e-51 | -8.615850e-47 |
| Msa0227290 | Msa0582570 | 0.801707 | 7.929349e-49 | -8.615850e-47 |
| Msa0231310 | Msa0582570 | 0.837376 | 5.392757e-57 | -8.615850e-47 |
| Msa0369750 | Msa0582570 | 0.825105 | 5.618863e-54 | -8.615850e-47 |
| Msa0370210 | Msa0582570 | 0.825991 | 3.466052e-54 | -8.615850e-47 |
| Msa0370510 | Msa0582570 | 0.810485 | 1.126072e-50 | -8.615850e-47 |
| Msa0377460 | Msa0582570 | 0.813448 | 2.546735e-51 | -8.615850e-47 |
| Msa0377690 | Msa0582570 | 0.800059 | 1.721278e-48 | -8.615850e-47 |
| Msa0379720 | Msa0582570 | 0.804350 | 2.253425e-49 | -8.615850e-47 |
| Msa0390950 | Msa0582570 | 0.817264 | 3.609434e-52 | -8.615850e-47 |
| Msa0398610 | Msa0582570 | 0.857633 | 1.428578e-62 | -8.615850e-47 |
| Msa0398620 | Msa0582570 | 0.827488 | 1.521891e-54 | -8.615850e-47 |
| Msa0417130 | Msa0582570 | 0.808894 | 2.474798e-50 | -8.615850e-47 |
| Msa0423600 | Msa0582570 | 0.801390 | 9.210972e-49 | -8.615850e-47 |
| Msa0426860 | Msa0582570 | 0.815909 | 7.258743e-52 | -8.615850e-47 |
| Msa0426890 | Msa0582570 | 0.818574 | 1.825627e-52 | -8.615850e-47 |
| Msa0427050 | Msa0582570 | 0.835528 | 1.592521e-56 | -8.615850e-47 |
| Msa0429100 | Msa0582570 | 0.811536 | 6.666311e-51 | -8.615850e-47 |
| Msa0429130 | Msa0582570 | 0.802387 | 5.747475e-49 | -8.615850e-47 |
| Msa0449900 | Msa0582570 | 0.903208 | 4.399983e-79 | -8.615850e-47 |
| Msa0449930 | Msa0582570 | 0.823639 | 1.243229e-53 | -8.615850e-47 |
| Msa0451370 | Msa0582570 | 0.813414 | 2.591067e-51 | -8.615850e-47 |
| Msa0456480 | Msa0582570 | 0.806460 | 8.139606e-50 | -8.615850e-47 |
| Msa0463960 | Msa0582570 | 0.816528 | 5.279415e-52 | -8.615850e-47 |
| Msa0464500 | Msa0582570 | 0.814898 | 1.218485e-51 | -8.615850e-47 |
| Msa0471090 | Msa0582570 | 0.800678 | 1.287384e-48 | -8.615850e-47 |
| Msa0472870 | Msa0582570 | 0.824333 | 8.541540e-54 | -8.615850e-47 |
| Msa0473320 | Msa0582570 | 0.816321 | 5.872306e-52 | -8.615850e-47 |
| Msa0473450 | Msa0582570 | 0.821216 | 4.542955e-53 | -8.615850e-47 |
| Msa0475830 | Msa0582570 | 0.882021 | 1.476227e-70 | -8.615850e-47 |
| Msa0482020 | Msa0582570 | 0.801216 | 9.999272e-49 | -8.615850e-47 |
| Msa0240290 | Msa0582570 | 0.834360 | 3.135241e-56 | -8.615850e-47 |
| Msa0244320 | Msa0582570 | 0.801804 | 7.573707e-49 | -8.615850e-47 |
| Msa0244370 | Msa0582570 | 0.800981 | 1.116552e-48 | -8.615850e-47 |
| Msa0256170 | Msa0582570 | 0.833829 | 4.258508e-56 | -8.615850e-47 |
| Msa0268180 | Msa0582570 | 0.873038 | 2.003068e-67 | -8.615850e-47 |
| Msa0268220 | Msa0582570 | 0.960952 | 3.839294e-119 | -8.615850e-47 |
| Msa0268340 | Msa0582570 | 0.929134 | 1.074598e-92 | -8.615850e-47 |
| Msa0268380 | Msa0582570 | 0.817340 | 3.469023e-52 | -8.615850e-47 |
| Msa0268420 | Msa0582570 | 0.872542 | 2.936557e-67 | -8.615850e-47 |
| Msa0268460 | Msa0582570 | 0.940160 | 3.747830e-100 | -8.615850e-47 |
| Msa0268500 | Msa0582570 | 0.948004 | 2.224148e-106 | -8.615850e-47 |
| Msa0268540 | Msa0582570 | 0.851644 | 7.758378e-61 | -8.615850e-47 |
| Msa0268560 | Msa0582570 | 0.808485 | 3.026414e-50 | -8.615850e-47 |
| Msa0268630 | Msa0582570 | 0.813720 | 2.219019e-51 | -8.615850e-47 |
| Msa0268650 | Msa0582570 | 0.873528 | 1.371548e-67 | -8.615850e-47 |
| Msa0268680 | Msa0582570 | 0.893823 | 4.389094e-75 | -8.615850e-47 |
| Msa0268690 | Msa0582570 | 0.892890 | 1.045231e-74 | -8.615850e-47 |
| Msa0268730 | Msa0582570 | 0.812946 | 3.281345e-51 | -8.615850e-47 |
| Msa0268740 | Msa0582570 | 0.807170 | 5.761565e-50 | -8.615850e-47 |
| Msa0268760 | Msa0582570 | 0.857710 | 1.356202e-62 | -8.615850e-47 |
| Msa0268850 | Msa0582570 | 0.861898 | 7.421334e-64 | -8.615850e-47 |
| Msa0268900 | Msa0582570 | 0.924092 | 1.116816e-89 | -8.615850e-47 |
| Msa0268930 | Msa0582570 | 0.810810 | 9.577931e-51 | -8.615850e-47 |
| Msa0268950 | Msa0582570 | 0.810796 | 9.644739e-51 | -8.615850e-47 |
| Msa0269060 | Msa0582570 | 0.861742 | 8.285142e-64 | -8.615850e-47 |
| Msa0269100 | Msa0582570 | 0.935990 | 3.543369e-97 | -8.615850e-47 |
| Msa0278080 | Msa0582570 | 0.825491 | 4.553681e-54 | -8.615850e-47 |
| Msa0282880 | Msa0582570 | 0.820524 | 6.552854e-53 | -8.615850e-47 |
| Msa0288270 | Msa0582570 | 0.801422 | 9.070501e-49 | -8.615850e-47 |
| Msa0288280 | Msa0582570 | 0.807937 | 3.960067e-50 | -8.615850e-47 |
| Msa0301800 | Msa0582570 | 0.809063 | 2.276871e-50 | -8.615850e-47 |
| Msa0306130 | Msa0582570 | 0.817301 | 3.540114e-52 | -8.615850e-47 |
| Msa0309160 | Msa0582570 | 0.831052 | 2.077472e-55 | -8.615850e-47 |
| Msa0317630 | Msa0582570 | 0.820800 | 5.664347e-53 | -8.615850e-47 |
| Msa0321180 | Msa0582570 | 0.816007 | 6.904927e-52 | -8.615850e-47 |
| Msa0321200 | Msa0582570 | 0.819759 | 9.810803e-53 | -8.615850e-47 |
| Msa0324060 | Msa0582570 | 0.822773 | 1.979928e-53 | -8.615850e-47 |
| Msa0324430 | Msa0582570 | 0.805840 | 1.099080e-49 | -8.615850e-47 |
| Msa0338900 | Msa0582570 | 0.816662 | 4.927605e-52 | -8.615850e-47 |
| Msa0344180 | Msa0582570 | 0.819322 | 1.234496e-52 | -8.615850e-47 |
| Msa0344190 | Msa0582570 | 0.808250 | 3.396807e-50 | -8.615850e-47 |
| Msa0344200 | Msa0582570 | 0.817129 | 3.870860e-52 | -8.615850e-47 |
| Msa0344240 | Msa0582570 | 0.873011 | 2.045216e-67 | -8.615850e-47 |
| Msa0344250 | Msa0582570 | 0.954398 | 3.237104e-112 | -8.615850e-47 |
| Msa0344310 | Msa0582570 | 0.804940 | 1.696843e-49 | -8.615850e-47 |
| Msa0509510 | Msa0582570 | 0.821094 | 4.847308e-53 | -8.615850e-47 |
| Msa0512770 | Msa0582570 | 0.806528 | 7.874725e-50 | -8.615850e-47 |
| Msa0517400 | Msa0582570 | 0.810612 | 1.056890e-50 | -8.615850e-47 |
| Msa0539900 | Msa0582570 | 0.804287 | 2.322585e-49 | -8.615850e-47 |
| Msa0551520 | Msa0582570 | 0.807304 | 5.397435e-50 | -8.615850e-47 |
| Msa0558220 | Msa0582570 | 0.813053 | 3.109004e-51 | -8.615850e-47 |
| Msa0558890 | Msa0582570 | 0.818220 | 2.196446e-52 | -8.615850e-47 |
| Msa0564000 | Msa0582570 | 0.821226 | 4.519663e-53 | -8.615850e-47 |
| Msa0568490 | Msa0582570 | 0.806601 | 7.601002e-50 | -8.615850e-47 |
| Msa0568810 | Msa0582570 | 0.802954 | 4.390311e-49 | -8.615850e-47 |
| Msa0574230 | Msa0582570 | 0.824345 | 8.489072e-54 | -8.615850e-47 |
| Msa0576510 | Msa0582570 | 0.820887 | 5.408216e-53 | -8.615850e-47 |
| Msa0577910 | Msa0582570 | 0.806125 | 9.572401e-50 | -8.615850e-47 |
| Msa0582530 | Msa0582570 | 0.807538 | 4.812920e-50 | -8.615850e-47 |
| Msa0582570 | Msa0582580 | 0.934097 | 6.840774e-96 | -8.615850e-47 |
| Msa0582570 | Msa0582620 | 0.821907 | 3.146178e-53 | -8.615850e-47 |
| Msa0582570 | Msa0582640 | 0.812043 | 5.169979e-51 | -8.615850e-47 |
| Msa0582570 | Msa0582660 | 0.802060 | 6.710968e-49 | -8.615850e-47 |
| Msa0582570 | Msa0582710 | 0.831994 | 1.217078e-55 | -8.615850e-47 |
| Msa0582570 | Msa0582740 | 0.832448 | 9.397574e-56 | -8.615850e-47 |
| Msa0582570 | Msa0582760 | 0.814884 | 1.227346e-51 | -8.615850e-47 |
| Msa0582570 | Msa0582830 | 0.829577 | 4.762206e-55 | -8.615850e-47 |
| Msa0582570 | Msa0582900 | 0.812778 | 3.572578e-51 | -8.615850e-47 |
| Msa0582570 | Msa0582930 | 0.828804 | 7.331787e-55 | -8.615850e-47 |
| Msa0582570 | Msa0587060 | 0.827396 | 1.601582e-54 | -8.615850e-47 |
| Msa0582570 | Msa0591290 | 0.809709 | 1.655144e-50 | -8.615850e-47 |
| Msa0582570 | Msa0591370 | 0.854297 | 1.351703e-61 | -8.615850e-47 |
| Msa0582570 | Msa0591380 | 0.817892 | 2.604982e-52 | -8.615850e-47 |
| Msa0582570 | Msa0595240 | 0.831480 | 1.630182e-55 | -8.615850e-47 |
| Msa0582570 | Msa0606680 | 0.838132 | 3.448930e-57 | -8.615850e-47 |
| Msa0582570 | Msa0619060 | 0.802576 | 5.255414e-49 | -8.615850e-47 |
| Msa0582570 | Msa0619480 | 0.829712 | 4.416591e-55 | -8.615850e-47 |
| Msa0582570 | Msa0624890 | 0.800959 | 1.128402e-48 | -8.615850e-47 |
| Msa0582570 | Msa0626890 | 0.814221 | 1.720755e-51 | -8.615850e-47 |
| Msa0582570 | Msa0635990 | 0.839774 | 1.295831e-57 | -8.615850e-47 |
| Msa0582570 | Msa0638040 | 0.802466 | 5.534916e-49 | -8.615850e-47 |
| Msa0582570 | Msa0653710 | 0.800977 | 1.118617e-48 | -8.615850e-47 |
| Msa0582570 | Msa0659640 | 0.843358 | 1.471758e-58 | -8.615850e-47 |
| Msa0582570 | Msa0665010 | 0.818148 | 2.280383e-52 | -8.615850e-47 |
| Msa0582570 | Msa0665040 | 0.803440 | 3.482749e-49 | -8.615850e-47 |
| Msa0582570 | Msa0668630 | 0.912660 | 1.509137e-83 | -8.615850e-47 |
| Msa0582570 | Msa0687320 | 0.825067 | 5.736526e-54 | -8.615850e-47 |
| Msa0582570 | Msa0688350 | 0.813052 | 3.110368e-51 | -8.615850e-47 |
| Msa0582570 | Msa0704750 | 0.803804 | 2.926428e-49 | -8.615850e-47 |
| Msa0582570 | Msa0705610 | 0.801223 | 9.963946e-49 | -8.615850e-47 |
| Msa0582570 | Msa0706710 | 0.845149 | 4.863180e-59 | -8.615850e-47 |
| Msa0582570 | Msa0707870 | 0.829437 | 5.149405e-55 | -8.615850e-47 |
| Msa0582570 | Msa0708120 | 0.811225 | 7.788838e-51 | -8.615850e-47 |
| Msa0582570 | Msa0714160 | 0.801891 | 7.270606e-49 | -8.615850e-47 |
| Msa0582570 | Msa0727020 | 0.857041 | 2.137898e-62 | -8.615850e-47 |
| Msa0582570 | Msa0727040 | 0.847501 | 1.110898e-59 | -8.615850e-47 |
| Msa0582570 | Msa0729590 | 0.804313 | 2.294003e-49 | -8.615850e-47 |
| Msa0582570 | Msa0736330 | 0.846675 | 1.871062e-59 | -8.615850e-47 |
| Msa0582570 | Msa0736930 | 0.820038 | 8.472217e-53 | -8.615850e-47 |
| Msa0582570 | Msa0739570 | 0.806143 | 9.493650e-50 | -8.615850e-47 |
| Msa0582570 | Msa0755590 | 0.807095 | 5.974928e-50 | -8.615850e-47 |
| Msa0582570 | Msa0766880 | 0.857599 | 1.462806e-62 | -8.615850e-47 |
| Msa0582570 | Msa0771940 | 0.809894 | 1.510028e-50 | -8.615850e-47 |
| Msa0582570 | Msa0772210 | 0.811632 | 6.352374e-51 | -8.615850e-47 |
| Msa0582570 | Msa0776540 | -0.800117 | 1.675494e-48 | -8.615850e-47 |
| Msa0582570 | Msa0778060 | 0.833789 | 4.359438e-56 | -8.615850e-47 |
| Msa0582570 | Msa0782330 | 0.806389 | 8.424508e-50 | -8.615850e-47 |
| Msa0582570 | Msa0796450 | 0.802993 | 4.308497e-49 | -8.615850e-47 |
| Msa0582570 | Msa0801390 | 0.812217 | 4.737166e-51 | -8.615850e-47 |
| Msa0582570 | Msa0804930 | 0.806955 | 6.398211e-50 | -8.615850e-47 |
| Msa0582570 | Msa0821490 | 0.827906 | 1.207762e-54 | -8.615850e-47 |
| Msa0582570 | Msa0834160 | 0.814764 | 1.304557e-51 | -8.615850e-47 |
| Msa0582570 | Msa0835010 | 0.800153 | 1.647006e-48 | -8.615850e-47 |
| Msa0582570 | Msa0839730 | 0.835488 | 1.629623e-56 | -8.615850e-47 |
| Msa0582570 | Msa0841980 | 0.810678 | 1.022853e-50 | -8.615850e-47 |
| Msa0582570 | Msa0855490 | 0.840202 | 1.002013e-57 | -8.615850e-47 |
| Msa0582570 | Msa0860270 | 0.813651 | 2.297709e-51 | -8.615850e-47 |
| Msa0582570 | Msa0880060 | 0.801662 | 8.101247e-49 | -8.615850e-47 |
| Msa0582570 | Msa0880370 | 0.801826 | 7.498139e-49 | -8.615850e-47 |
| Msa0582570 | Msa0910650 | 0.801367 | 9.312493e-49 | -8.615850e-47 |
| Msa0582570 | Msa0924820 | 0.943180 | 1.913972e-102 | -8.615850e-47 |
| Msa0582570 | Msa0924870 | 0.811364 | 7.265006e-51 | -8.615850e-47 |
| Msa0582570 | Msa0924890 | 0.860059 | 2.688734e-63 | -8.615850e-47 |
| Msa0582570 | Msa0924970 | 0.906921 | 8.842550e-81 | -8.615850e-47 |
| Msa0582570 | Msa0925020 | 0.952764 | 1.196872e-110 | -8.615850e-47 |
| Msa0582570 | Msa0930990 | 0.888710 | 4.637200e-73 | -8.615850e-47 |
| Msa0582570 | Msa0931090 | 0.841179 | 5.557686e-58 | -8.615850e-47 |
| Msa0582570 | Msa0931150 | 0.831870 | 1.306427e-55 | -8.615850e-47 |
| Msa0582570 | Msa0931220 | 0.827580 | 1.446135e-54 | -8.615850e-47 |
| Msa0582570 | Msa0931280 | 0.881601 | 2.096679e-70 | -8.615850e-47 |
| Msa0582570 | Msa0981300 | 0.816902 | 4.352376e-52 | -8.615850e-47 |
| Msa0582570 | Msa0981900 | 0.801738 | 7.815948e-49 | -8.615850e-47 |
| Msa0582570 | Msa0983670 | 0.920172 | 1.791685e-87 | -8.615850e-47 |
| Msa0582570 | Msa0998940 | 0.812740 | 3.641307e-51 | -8.615850e-47 |
| Msa0582570 | Msa1007980 | 0.807438 | 5.054899e-50 | -8.615850e-47 |
| Msa0582570 | Msa1008960 | 0.817190 | 3.749495e-52 | -8.615850e-47 |
| Msa0582570 | Msa1016130 | 0.825979 | 3.488405e-54 | -8.615850e-47 |
| Msa0582570 | Msa1024580 | 0.810123 | 1.347904e-50 | -8.615850e-47 |
| Msa0582570 | Msa1031220 | 0.804396 | 2.204111e-49 | -8.615850e-47 |
| Msa0582570 | Msa1033230 | 0.818883 | 1.553873e-52 | -8.615850e-47 |
| Msa0582570 | Msa1037570 | 0.810361 | 1.197447e-50 | -8.615850e-47 |
| Msa0582570 | Msa1038420 | 0.804264 | 2.348131e-49 | -8.615850e-47 |
| Msa0582570 | Msa1049440 | 0.853907 | 1.751380e-61 | -8.615850e-47 |
| Msa0582570 | Msa1063180 | 0.820155 | 7.964634e-53 | -8.615850e-47 |
| Msa0582570 | Msa1070930 | 0.818895 | 1.544074e-52 | -8.615850e-47 |
| Msa0582570 | Msa1072770 | 0.840765 | 7.139049e-58 | -8.615850e-47 |
| Msa0582570 | Msa1079610 | 0.846017 | 2.829079e-59 | -8.615850e-47 |
| Msa0582570 | Msa1086020 | 0.952240 | 3.707298e-110 | -8.615850e-47 |
| Msa0582570 | Msa1086060 | 0.838173 | 3.366268e-57 | -8.615850e-47 |
| Msa0582570 | Msa1086080 | 0.826969 | 2.025723e-54 | -8.615850e-47 |
| Msa0582570 | Msa1086160 | 0.878699 | 2.273796e-69 | -8.615850e-47 |
| Msa0582570 | Msa1086170 | 0.830728 | 2.493739e-55 | -8.615850e-47 |
| Msa0582570 | Msa1086190 | 0.804007 | 2.656030e-49 | -8.615850e-47 |
| Msa0582570 | Msa1086260 | 0.855729 | 5.189565e-62 | -8.615850e-47 |
| Msa0582570 | Msa1086290 | 0.853507 | 2.282770e-61 | -8.615850e-47 |
| Msa0582570 | Msa1086330 | 0.962167 | 1.480195e-120 | -8.615850e-47 |
| Msa0582570 | Msa1086340 | 0.913867 | 3.737398e-84 | -8.615850e-47 |
| Msa0582570 | Msa1086370 | 0.864905 | 8.682710e-65 | -8.615850e-47 |
| Msa0582570 | Msa1086410 | 0.886289 | 3.893157e-72 | -8.615850e-47 |
| Msa0582570 | Msa1086440 | 0.861920 | 7.306559e-64 | -8.615850e-47 |
| Msa0582570 | Msa1086480 | 0.831501 | 1.610253e-55 | -8.615850e-47 |
| Msa0582570 | Msa1086520 | 0.947833 | 3.109608e-106 | -8.615850e-47 |
| Msa0582570 | Msa1086630 | 0.965005 | 4.779329e-124 | -8.615850e-47 |
| Msa0582570 | Msa1086690 | 0.940064 | 4.413289e-100 | -8.615850e-47 |
| Msa0582570 | Msa1086830 | 0.961629 | 6.350211e-120 | -8.615850e-47 |
| Msa0582570 | Msa1086870 | 0.844073 | 9.472724e-59 | -8.615850e-47 |
| Msa0582570 | Msa1086890 | 0.803639 | 3.167010e-49 | -8.615850e-47 |
| Msa0582570 | Msa1087000 | 0.888941 | 3.775969e-73 | -8.615850e-47 |
| Msa0582570 | Msa1091690 | 0.811126 | 8.180479e-51 | -8.615850e-47 |
| Msa0582570 | Msa1098070 | 0.807502 | 4.897998e-50 | -8.615850e-47 |
| Msa0582570 | Msa1108530 | 0.806621 | 7.526608e-50 | -8.615850e-47 |
| Msa0582570 | Msa1122480 | 0.824391 | 8.277949e-54 | -8.615850e-47 |
| Msa0582570 | Msa1123340 | 0.825768 | 3.915021e-54 | -8.615850e-47 |
| Msa0582570 | Msa1124180 | 0.800435 | 1.443084e-48 | -8.615850e-47 |
| Msa0582570 | Msa1124440 | 0.854191 | 1.451159e-61 | -8.615850e-47 |
| Msa0582570 | Msa1126910 | 0.802529 | 5.372555e-49 | -8.615850e-47 |
| Msa0582570 | Msa1130070 | 0.800071 | 1.711859e-48 | -8.615850e-47 |
| Msa0582570 | Msa1130700 | 0.825888 | 3.666036e-54 | -8.615850e-47 |
| Msa0582570 | Msa1131010 | 0.814005 | 1.920011e-51 | -8.615850e-47 |
| Msa0582570 | Msa1132540 | 0.804528 | 2.068448e-49 | -8.615850e-47 |
| Msa0582570 | Msa1140940 | 0.809335 | 1.990795e-50 | -8.615850e-47 |
| Msa0582570 | Msa1143140 | 0.829797 | 4.211037e-55 | -8.615850e-47 |
| Msa0582570 | Msa1143160 | 0.820173 | 7.890166e-53 | -8.615850e-47 |
| Msa0582570 | Msa1152280 | 0.807832 | 4.167890e-50 | -8.615850e-47 |
| Msa0582570 | Msa1157160 | 0.820891 | 5.398254e-53 | -8.615850e-47 |
| Msa0582570 | Msa1161120 | 0.820651 | 6.129158e-53 | -8.615850e-47 |
| Msa0582570 | Msa1161160 | 0.811130 | 8.165343e-51 | -8.615850e-47 |
| Msa0582570 | Msa1168130 | 0.831051 | 2.077490e-55 | -8.615850e-47 |
| Msa0582570 | Msa1173410 | 0.811901 | 5.551671e-51 | -8.615850e-47 |
| Msa0582570 | Msa1195860 | 0.822800 | 1.951535e-53 | -8.615850e-47 |
| Msa0582570 | Msa1198420 | 0.842896 | 1.954528e-58 | -8.615850e-47 |
| Msa0582570 | Msa1199690 | 0.838514 | 2.747921e-57 | -8.615850e-47 |
| Msa0582570 | Msa1204110 | 0.837063 | 6.482305e-57 | -8.615850e-47 |
| Msa0582570 | Msa1209390 | 0.803348 | 3.638988e-49 | -8.615850e-47 |
| Msa0582570 | Msa1209650 | 0.818713 | 1.697871e-52 | -8.615850e-47 |
| Msa0582570 | Msa1211100 | 0.827698 | 1.355209e-54 | -8.615850e-47 |
| Msa0582570 | Msa1211120 | 0.818466 | 1.931272e-52 | -8.615850e-47 |
| Msa0582570 | Msa1211880 | 0.853441 | 2.385623e-61 | -8.615850e-47 |
| Msa0582570 | Msa1213170 | 0.800514 | 1.390894e-48 | -8.615850e-47 |
| Msa0582570 | Msa1215660 | 0.804605 | 1.993838e-49 | -8.615850e-47 |
| Msa0582570 | Msa1245300 | 0.834892 | 2.304860e-56 | -8.615850e-47 |
| Msa0582570 | Msa1246420 | 0.822124 | 2.801918e-53 | -8.615850e-47 |
| Msa0582570 | Msa1248400 | 0.816868 | 4.428317e-52 | -8.615850e-47 |
| Msa0582570 | Msa1251960 | 0.810977 | 8.814997e-51 | -8.615850e-47 |
| Msa0582570 | Msa1252040 | 0.863443 | 2.479966e-64 | -8.615850e-47 |
| Msa0582570 | Msa1264230 | 0.822878 | 1.871172e-53 | -8.615850e-47 |
| Msa0582570 | Msa1267800 | 0.817449 | 3.278494e-52 | -8.615850e-47 |
| Msa0582570 | Msa1279240 | 0.812188 | 4.807267e-51 | -8.615850e-47 |
| Msa0582570 | Msa1298740 | 0.800000 | 1.769310e-48 | -8.615850e-47 |
| Msa0582570 | Msa1302920 | 0.812457 | 4.199160e-51 | -8.615850e-47 |
| Msa0582570 | Msa1327820 | 0.819444 | 1.157963e-52 | -8.615850e-47 |
| Msa0582570 | Msa1332180 | 0.846703 | 1.839038e-59 | -8.615850e-47 |
| Msa0582570 | Msa1336350 | 0.802361 | 5.818220e-49 | -8.615850e-47 |
| Msa0582570 | Msa1343540 | 0.838731 | 2.415933e-57 | -8.615850e-47 |
| Msa0582570 | Msa1351560 | 0.817488 | 3.213132e-52 | -8.615850e-47 |
| Msa0582570 | Msa1354850 | 0.949591 | 9.333436e-108 | -8.615850e-47 |
| Msa0582570 | Msa1354890 | 0.809701 | 1.661086e-50 | -8.615850e-47 |
| Msa0582570 | Msa1354910 | 0.807802 | 4.231108e-50 | -8.615850e-47 |
| Msa0582570 | Msa1354930 | 0.804340 | 2.264690e-49 | -8.615850e-47 |
| Msa0582570 | Msa1355020 | 0.957334 | 3.485905e-115 | -8.615850e-47 |
| Msa0582570 | Msa1355060 | 0.824683 | 7.069298e-54 | -8.615850e-47 |
| Msa0582570 | Msa1355100 | 0.808859 | 2.517507e-50 | -8.615850e-47 |
| Msa0582570 | Msa1371250 | 0.847511 | 1.104046e-59 | -8.615850e-47 |
| Msa0582570 | Msa1373340 | 0.802881 | 4.546282e-49 | -8.615850e-47 |
| Msa0582570 | Msa1373590 | 0.821862 | 3.221366e-53 | -8.615850e-47 |
| Msa0582570 | Msa1379370 | 0.807818 | 4.196531e-50 | -8.615850e-47 |
| Msa0582570 | Msa1380540 | 0.945161 | 5.123917e-104 | -8.615850e-47 |
| Msa0582570 | Msa1380600 | 0.832313 | 1.015114e-55 | -8.615850e-47 |
| Msa0582570 | Msa1385450 | 0.817076 | 3.976762e-52 | -8.615850e-47 |
| Msa0582570 | Msa1385940 | 0.844261 | 8.435913e-59 | -8.615850e-47 |
| Msa0582570 | Msa1387090 | 0.835258 | 1.863294e-56 | -8.615850e-47 |
| Msa0582570 | Msa1389990 | 0.820419 | 6.927765e-53 | -8.615850e-47 |
| Msa0582570 | Msa1390410 | 0.832990 | 6.893749e-56 | -8.615850e-47 |
| Msa0582570 | Msa1393600 | 0.847755 | 9.460097e-60 | -8.615850e-47 |
| Msa0582570 | Msa1394090 | 0.962050 | 2.034126e-120 | -8.615850e-47 |
| Msa0582570 | Msa1394100 | 0.939968 | 5.190897e-100 | -8.615850e-47 |
| Msa0582570 | Msa1394140 | 0.802021 | 6.835589e-49 | -8.615850e-47 |
| Msa0582570 | Msa1394170 | 0.853467 | 2.344708e-61 | -8.615850e-47 |
| Msa0582570 | Msa1394210 | 0.819048 | 1.424870e-52 | -8.615850e-47 |
| Msa0582570 | Msa1394220 | 0.801985 | 6.953001e-49 | -8.615850e-47 |
| Msa0582570 | Msa1394280 | 0.941118 | 7.246674e-101 | -8.615850e-47 |
| Msa0582570 | Msa1400600 | 0.851306 | 9.674052e-61 | -8.615850e-47 |
| Msa0582570 | Msa1405190 | 0.827900 | 1.211611e-54 | -8.615850e-47 |
| Msa0582570 | Msa1414560 | 0.802401 | 5.709817e-49 | -8.615850e-47 |
| Msa0582570 | Msa1415120 | 0.858985 | 5.655062e-63 | -8.615850e-47 |
| Msa0582570 | Msa1425050 | 0.813824 | 2.104959e-51 | -8.615850e-47 |
| Msa0582570 | Msa1425110 | 0.804125 | 2.509803e-49 | -8.615850e-47 |
| Msa0582570 | Msa1426870 | 0.805858 | 1.089701e-49 | -8.615850e-47 |
| Msa0582570 | Msa1433650 | 0.838589 | 2.628842e-57 | -8.615850e-47 |
| Msa0582570 | Msa1438420 | 0.820203 | 7.765281e-53 | -8.615850e-47 |
| Msa0582570 | Msa1439160 | 0.853984 | 1.663994e-61 | -8.615850e-47 |
| Msa0582570 | Msa1454940 | 0.829835 | 4.121956e-55 | -8.615850e-47 |
| Msa0582570 | Msa1465410 | 0.815688 | 8.130484e-52 | -8.615850e-47 |
| Msa0582570 | Msa1466170 | 0.830237 | 3.288746e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582570 | MtrunA17_CPg0492781 | 98.333 | 60 | 1 | 0 | 46 | 105 | 7 | 66 | 1.14e-38 | 124 |
| Msa0582570 | MtrunA17_Chr4g0015791 | 98.333 | 60 | 1 | 0 | 46 | 105 | 7 | 66 | 1.14e-38 | 124 |
| Msa0582570 | MtrunA17_Chr8g0355601 | 96.610 | 59 | 2 | 0 | 46 | 104 | 7 | 65 | 1.73e-37 | 120 |
| Msa0582570 | MtrunA17_Chr7g0224991 | 95.455 | 44 | 2 | 0 | 62 | 105 | 6 | 49 | 7.95e-26 | 90.9 |
| Msa0582570 | MtrunA17_CPg0492791 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0582570 | MtrunA17_Chr4g0015781 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0582570 | MtrunA17_Chr4g0028951 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0582570 | MtrunA17_Chr8g0355611 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0582570 | MtrunA17_Chr4g0016881 | 96.774 | 31 | 1 | 0 | 15 | 45 | 1 | 31 | 5.83e-15 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0582570 | ATCG00640.1 | 75.000 | 60 | 15 | 0 | 46 | 105 | 7 | 66 | 2.13e-29 | 100 |
| Msa0582570 | ATCG00630.1 | 84.375 | 32 | 5 | 0 | 15 | 46 | 1 | 32 | 8.57e-13 | 58.2 |
Find 13 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACGAATAACTGTTATTT+TGG | 0.125276 | 4_2:+1073995 | Msa0582570:CDS |
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | 4_2:+1074039 | Msa0582570:CDS |
| AATCGTATGTTTGCAACAAA+AGG | 0.396841 | 4_2:-1074135 | None:intergenic |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | 4_2:+1073368 | Msa0582570:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | 4_2:+1074040 | Msa0582570:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | 4_2:+1073385 | Msa0582570:CDS |
| ACACAATACACCTAGTCGAT+TGG | 0.524208 | 4_2:+1074094 | Msa0582570:CDS |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | 4_2:+1073375 | Msa0582570:CDS |
| ATCGTATGTTTGCAACAAAA+GGG | 0.538893 | 4_2:-1074134 | None:intergenic |
| TTTCTCAATTCCAATCGACT+AGG | 0.574270 | 4_2:-1074104 | None:intergenic |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | 4_2:+1073354 | Msa0582570:CDS |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | 4_2:-1073370 | None:intergenic |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | 4_2:+1074041 | Msa0582570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACTAGAATCAAAAAAA+GGG | - | chr4_2:1073457-1073476 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | + | chr4_2:1073581-1073600 | Msa0582570:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | - | chr4_2:1073675-1073694 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | + | chr4_2:1073831-1073850 | Msa0582570:intron | 15.0% |
| !! | AATAACTAGAATCAAAAAAA+GGG | - | chr4_2:1073457-1073476 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | + | chr4_2:1073581-1073600 | Msa0582570:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | - | chr4_2:1073675-1073694 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | + | chr4_2:1073831-1073850 | Msa0582570:intron | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | - | chr4_2:1073305-1073324 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | + | chr4_2:1073304-1073323 | Msa0582570:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | - | chr4_2:1073456-1073475 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | - | chr4_2:1073458-1073477 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | + | chr4_2:1073456-1073475 | Msa0582570:intron | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | - | chr4_2:1073511-1073530 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | + | chr4_2:1073584-1073603 | Msa0582570:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | + | chr4_2:1073590-1073609 | Msa0582570:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | - | chr4_2:1073706-1073725 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | + | chr4_2:1073995-1074014 | Msa0582570:CDS | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | + | chr4_2:1074031-1074050 | Msa0582570:CDS | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | - | chr4_2:1073305-1073324 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | + | chr4_2:1073304-1073323 | Msa0582570:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | - | chr4_2:1073456-1073475 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | - | chr4_2:1073458-1073477 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | + | chr4_2:1073456-1073475 | Msa0582570:intron | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | - | chr4_2:1073511-1073530 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | + | chr4_2:1073584-1073603 | Msa0582570:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | + | chr4_2:1073590-1073609 | Msa0582570:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | - | chr4_2:1073706-1073725 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | + | chr4_2:1073995-1074014 | Msa0582570:CDS | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | + | chr4_2:1074031-1074050 | Msa0582570:CDS | 20.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | - | chr4_2:1073528-1073547 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | - | chr4_2:1073529-1073548 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | + | chr4_2:1073710-1073729 | Msa0582570:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | + | chr4_2:1073711-1073730 | Msa0582570:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | + | chr4_2:1073949-1073968 | Msa0582570:intron | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | - | chr4_2:1073528-1073547 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | - | chr4_2:1073529-1073548 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | + | chr4_2:1073710-1073729 | Msa0582570:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | + | chr4_2:1073711-1073730 | Msa0582570:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | + | chr4_2:1073949-1073968 | Msa0582570:intron | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | + | chr4_2:1073307-1073326 | Msa0582570:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | + | chr4_2:1073345-1073364 | Msa0582570:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | + | chr4_2:1073417-1073436 | Msa0582570:intron | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | + | chr4_2:1073461-1073480 | Msa0582570:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | - | chr4_2:1073616-1073635 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | + | chr4_2:1073690-1073709 | Msa0582570:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | + | chr4_2:1073714-1073733 | Msa0582570:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | + | chr4_2:1073952-1073971 | Msa0582570:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | - | chr4_2:1073985-1074004 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | + | chr4_2:1074039-1074058 | Msa0582570:CDS | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | + | chr4_2:1074040-1074059 | Msa0582570:CDS | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | + | chr4_2:1074041-1074060 | Msa0582570:CDS | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | - | chr4_2:1074137-1074156 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | - | chr4_2:1074138-1074157 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | + | chr4_2:1073307-1073326 | Msa0582570:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | + | chr4_2:1073345-1073364 | Msa0582570:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | + | chr4_2:1073417-1073436 | Msa0582570:intron | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | + | chr4_2:1073461-1073480 | Msa0582570:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | - | chr4_2:1073616-1073635 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | + | chr4_2:1073690-1073709 | Msa0582570:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | + | chr4_2:1073714-1073733 | Msa0582570:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | + | chr4_2:1073952-1073971 | Msa0582570:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | - | chr4_2:1073985-1074004 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | + | chr4_2:1074039-1074058 | Msa0582570:CDS | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | + | chr4_2:1074040-1074059 | Msa0582570:CDS | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | + | chr4_2:1074041-1074060 | Msa0582570:CDS | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | - | chr4_2:1074137-1074156 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | - | chr4_2:1074138-1074157 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | + | chr4_2:1073619-1073638 | Msa0582570:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | - | chr4_2:1073639-1073658 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | - | chr4_2:1073640-1073659 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | + | chr4_2:1073715-1073734 | Msa0582570:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | - | chr4_2:1073910-1073929 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | + | chr4_2:1073959-1073978 | Msa0582570:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | - | chr4_2:1074107-1074126 | None:intergenic | 35.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | + | chr4_2:1073619-1073638 | Msa0582570:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | - | chr4_2:1073639-1073658 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | - | chr4_2:1073640-1073659 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | + | chr4_2:1073715-1073734 | Msa0582570:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | - | chr4_2:1073910-1073929 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | + | chr4_2:1073959-1073978 | Msa0582570:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | - | chr4_2:1074107-1074126 | None:intergenic | 35.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | + | chr4_2:1073606-1073625 | Msa0582570:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | + | chr4_2:1073628-1073647 | Msa0582570:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | + | chr4_2:1074094-1074113 | Msa0582570:CDS | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | + | chr4_2:1073606-1073625 | Msa0582570:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | + | chr4_2:1073628-1073647 | Msa0582570:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | + | chr4_2:1074094-1074113 | Msa0582570:CDS | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | - | chr4_2:1073373-1073392 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | - | chr4_2:1073439-1073458 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | + | chr4_2:1073466-1073485 | Msa0582570:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | + | chr4_2:1073467-1073486 | Msa0582570:intron | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | - | chr4_2:1073373-1073392 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | - | chr4_2:1073439-1073458 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | + | chr4_2:1073466-1073485 | Msa0582570:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | + | chr4_2:1073467-1073486 | Msa0582570:intron | 45.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | + | chr4_2:1073354-1073373 | Msa0582570:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | + | chr4_2:1073368-1073387 | Msa0582570:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | + | chr4_2:1073375-1073394 | Msa0582570:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | - | chr4_2:1073438-1073457 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | + | chr4_2:1073468-1073487 | Msa0582570:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | + | chr4_2:1073966-1073985 | Msa0582570:intron | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | + | chr4_2:1073354-1073373 | Msa0582570:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | + | chr4_2:1073368-1073387 | Msa0582570:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | + | chr4_2:1073375-1073394 | Msa0582570:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | - | chr4_2:1073438-1073457 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | + | chr4_2:1073468-1073487 | Msa0582570:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | + | chr4_2:1073966-1073985 | Msa0582570:intron | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | + | chr4_2:1073385-1073404 | Msa0582570:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | - | chr4_2:1073968-1073987 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | + | chr4_2:1073965-1073984 | Msa0582570:intron | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | + | chr4_2:1073385-1073404 | Msa0582570:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | - | chr4_2:1073968-1073987 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | + | chr4_2:1073965-1073984 | Msa0582570:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 1073295 | 1074178 | 1073295 | ID=Msa0582570;Name=Msa0582570 |
| chr4_2 | mRNA | 1073295 | 1074178 | 1073295 | ID=Msa0582570-mRNA-1;Parent=Msa0582570;Name=Msa0582570-mRNA-1;_AED=0.45;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|105 |
| chr4_2 | exon | 1073295 | 1073427 | 1073295 | ID=Msa0582570-mRNA-1:exon:214;Parent=Msa0582570-mRNA-1 |
| chr4_2 | exon | 1073994 | 1074178 | 1073994 | ID=Msa0582570-mRNA-1:exon:215;Parent=Msa0582570-mRNA-1 |
| chr4_2 | CDS | 1073295 | 1073427 | 1073295 | ID=Msa0582570-mRNA-1:cds;Parent=Msa0582570-mRNA-1 |
| chr4_2 | CDS | 1073994 | 1074178 | 1073994 | ID=Msa0582570-mRNA-1:cds;Parent=Msa0582570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
