Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344250 | AET02655.1 | 89.691 | 97 | 3 | 1 | 15 | 104 | 1 | 97 | 2.91e-54 | 174 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344250 | sp|B5LMP5|RK33_CICAR | 96.667 | 60 | 2 | 0 | 46 | 105 | 7 | 66 | 2.77e-37 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344250 | G7L7R4 | 89.691 | 97 | 3 | 1 | 15 | 104 | 1 | 97 | 1.39e-54 | 174 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016830 | Msa0344250 | 0.832652 | 8.363820e-56 | -8.615850e-47 |
| Msa0030710 | Msa0344250 | 0.820321 | 7.296282e-53 | -8.615850e-47 |
| Msa0032040 | Msa0344250 | 0.804970 | 1.672822e-49 | -8.615850e-47 |
| Msa0034800 | Msa0344250 | 0.851191 | 1.041990e-60 | -8.615850e-47 |
| Msa0035090 | Msa0344250 | 0.820940 | 5.259924e-53 | -8.615850e-47 |
| Msa0039200 | Msa0344250 | 0.842101 | 3.175762e-58 | -8.615850e-47 |
| Msa0040190 | Msa0344250 | 0.845122 | 4.945179e-59 | -8.615850e-47 |
| Msa0065190 | Msa0344250 | 0.844504 | 7.256635e-59 | -8.615850e-47 |
| Msa0067820 | Msa0344250 | 0.803496 | 3.391064e-49 | -8.615850e-47 |
| Msa0082250 | Msa0344250 | 0.800026 | 1.747862e-48 | -8.615850e-47 |
| Msa0083200 | Msa0344250 | 0.815942 | 7.139183e-52 | -8.615850e-47 |
| Msa0083570 | Msa0344250 | 0.821176 | 4.640219e-53 | -8.615850e-47 |
| Msa0084550 | Msa0344250 | 0.822837 | 1.913366e-53 | -8.615850e-47 |
| Msa0086820 | Msa0344250 | 0.839158 | 1.872958e-57 | -8.615850e-47 |
| Msa0087880 | Msa0344250 | 0.852300 | 5.052956e-61 | -8.615850e-47 |
| Msa0092750 | Msa0344250 | 0.828132 | 1.065464e-54 | -8.615850e-47 |
| Msa0095140 | Msa0344250 | 0.938494 | 6.136657e-99 | -8.615850e-47 |
| Msa0095190 | Msa0344250 | 0.822116 | 2.814251e-53 | -8.615850e-47 |
| Msa0095240 | Msa0344250 | 0.925318 | 2.157997e-90 | -8.615850e-47 |
| Msa0095270 | Msa0344250 | 0.937893 | 1.649486e-98 | -8.615850e-47 |
| Msa0097490 | Msa0344250 | 0.802502 | 5.441246e-49 | -8.615850e-47 |
| Msa0099830 | Msa0344250 | 0.830944 | 2.207204e-55 | -8.615850e-47 |
| Msa0110500 | Msa0344250 | 0.814854 | 1.246444e-51 | -8.615850e-47 |
| Msa0114960 | Msa0344250 | 0.816203 | 6.241303e-52 | -8.615850e-47 |
| Msa0123940 | Msa0344250 | 0.802241 | 6.160633e-49 | -8.615850e-47 |
| Msa0124070 | Msa0344250 | 0.807969 | 3.897503e-50 | -8.615850e-47 |
| Msa0130120 | Msa0344250 | 0.822656 | 2.107610e-53 | -8.615850e-47 |
| Msa0130620 | Msa0344250 | 0.822522 | 2.264981e-53 | -8.615850e-47 |
| Msa0133670 | Msa0344250 | 0.842921 | 1.924563e-58 | -8.615850e-47 |
| Msa0133880 | Msa0344250 | 0.840891 | 6.615971e-58 | -8.615850e-47 |
| Msa0134550 | Msa0344250 | 0.850857 | 1.294902e-60 | -8.615850e-47 |
| Msa0138380 | Msa0344250 | 0.809233 | 2.094218e-50 | -8.615850e-47 |
| Msa0139740 | Msa0344250 | 0.834776 | 2.464374e-56 | -8.615850e-47 |
| Msa0143210 | Msa0344250 | 0.802821 | 4.677021e-49 | -8.615850e-47 |
| Msa0148590 | Msa0344250 | 0.803885 | 2.815126e-49 | -8.615850e-47 |
| Msa0156780 | Msa0344250 | 0.855172 | 7.541605e-62 | -8.615850e-47 |
| Msa0172660 | Msa0344250 | 0.800430 | 1.446692e-48 | -8.615850e-47 |
| Msa0175900 | Msa0344250 | 0.818412 | 1.987296e-52 | -8.615850e-47 |
| Msa0176530 | Msa0344250 | 0.822175 | 2.725963e-53 | -8.615850e-47 |
| Msa0181290 | Msa0344250 | 0.805175 | 1.515328e-49 | -8.615850e-47 |
| Msa0184120 | Msa0344250 | 0.843960 | 1.015791e-58 | -8.615850e-47 |
| Msa0186750 | Msa0344250 | 0.806809 | 6.868247e-50 | -8.615850e-47 |
| Msa0187560 | Msa0344250 | 0.800239 | 1.582364e-48 | -8.615850e-47 |
| Msa0189050 | Msa0344250 | 0.828298 | 9.717720e-55 | -8.615850e-47 |
| Msa0197600 | Msa0344250 | 0.806119 | 9.601122e-50 | -8.615850e-47 |
| Msa0198220 | Msa0344250 | 0.808225 | 3.438539e-50 | -8.615850e-47 |
| Msa0201910 | Msa0344250 | 0.820681 | 6.032052e-53 | -8.615850e-47 |
| Msa0207220 | Msa0344250 | 0.807580 | 4.714645e-50 | -8.615850e-47 |
| Msa0207530 | Msa0344250 | 0.833379 | 5.516574e-56 | -8.615850e-47 |
| Msa0207900 | Msa0344250 | 0.825675 | 4.119442e-54 | -8.615850e-47 |
| Msa0218480 | Msa0344250 | 0.805791 | 1.125598e-49 | -8.615850e-47 |
| Msa0218590 | Msa0344250 | 0.804316 | 2.290650e-49 | -8.615850e-47 |
| Msa0221860 | Msa0344250 | 0.928349 | 3.273613e-92 | -8.615850e-47 |
| Msa0222510 | Msa0344250 | 0.810346 | 1.206685e-50 | -8.615850e-47 |
| Msa0231310 | Msa0344250 | 0.829841 | 4.107340e-55 | -8.615850e-47 |
| Msa0240290 | Msa0344250 | 0.845627 | 3.610345e-59 | -8.615850e-47 |
| Msa0240460 | Msa0344250 | 0.811476 | 6.869471e-51 | -8.615850e-47 |
| Msa0244320 | Msa0344250 | 0.801405 | 9.143901e-49 | -8.615850e-47 |
| Msa0244370 | Msa0344250 | 0.801303 | 9.594531e-49 | -8.615850e-47 |
| Msa0256170 | Msa0344250 | 0.817465 | 3.251961e-52 | -8.615850e-47 |
| Msa0268180 | Msa0344250 | 0.859667 | 3.529298e-63 | -8.615850e-47 |
| Msa0268220 | Msa0344250 | 0.951616 | 1.400532e-109 | -8.615850e-47 |
| Msa0268340 | Msa0344250 | 0.927185 | 1.671378e-91 | -8.615850e-47 |
| Msa0268380 | Msa0344250 | 0.812235 | 4.696213e-51 | -8.615850e-47 |
| Msa0268390 | Msa0344250 | 0.801018 | 1.097690e-48 | -8.615850e-47 |
| Msa0268400 | Msa0344250 | 0.805514 | 1.286849e-49 | -8.615850e-47 |
| Msa0268410 | Msa0344250 | 0.812375 | 4.376894e-51 | -8.615850e-47 |
| Msa0268420 | Msa0344250 | 0.860169 | 2.490187e-63 | -8.615850e-47 |
| Msa0268460 | Msa0344250 | 0.928315 | 3.437252e-92 | -8.615850e-47 |
| Msa0268500 | Msa0344250 | 0.943800 | 6.251289e-103 | -8.615850e-47 |
| Msa0268540 | Msa0344250 | 0.850512 | 1.618937e-60 | -8.615850e-47 |
| Msa0268550 | Msa0344250 | 0.800159 | 1.642566e-48 | -8.615850e-47 |
| Msa0268560 | Msa0344250 | 0.830800 | 2.395088e-55 | -8.615850e-47 |
| Msa0268580 | Msa0344250 | 0.803596 | 3.233476e-49 | -8.615850e-47 |
| Msa0268630 | Msa0344250 | 0.830683 | 2.558199e-55 | -8.615850e-47 |
| Msa0268640 | Msa0344250 | 0.813055 | 3.106947e-51 | -8.615850e-47 |
| Msa0268650 | Msa0344250 | 0.859681 | 3.496659e-63 | -8.615850e-47 |
| Msa0268680 | Msa0344250 | 0.870578 | 1.313077e-66 | -8.615850e-47 |
| Msa0268690 | Msa0344250 | 0.858388 | 8.525962e-63 | -8.615850e-47 |
| Msa0268720 | Msa0344250 | 0.802528 | 5.374501e-49 | -8.615850e-47 |
| Msa0268730 | Msa0344250 | 0.812470 | 4.172182e-51 | -8.615850e-47 |
| Msa0268740 | Msa0344250 | 0.824569 | 7.519440e-54 | -8.615850e-47 |
| Msa0268760 | Msa0344250 | 0.859307 | 4.526791e-63 | -8.615850e-47 |
| Msa0268830 | Msa0344250 | 0.808861 | 2.515798e-50 | -8.615850e-47 |
| Msa0268850 | Msa0344250 | 0.855066 | 8.096357e-62 | -8.615850e-47 |
| Msa0268900 | Msa0344250 | 0.897932 | 8.698033e-77 | -8.615850e-47 |
| Msa0268930 | Msa0344250 | 0.809658 | 1.697360e-50 | -8.615850e-47 |
| Msa0268950 | Msa0344250 | 0.834456 | 2.966950e-56 | -8.615850e-47 |
| Msa0269040 | Msa0344250 | 0.801714 | 7.904918e-49 | -8.615850e-47 |
| Msa0269050 | Msa0344250 | 0.809089 | 2.247532e-50 | -8.615850e-47 |
| Msa0269060 | Msa0344250 | 0.857443 | 1.626341e-62 | -8.615850e-47 |
| Msa0269100 | Msa0344250 | 0.921015 | 6.147279e-88 | -8.615850e-47 |
| Msa0278080 | Msa0344250 | 0.828787 | 7.401598e-55 | -8.615850e-47 |
| Msa0278340 | Msa0344250 | 0.800300 | 1.537223e-48 | -8.615850e-47 |
| Msa0282880 | Msa0344250 | 0.820813 | 5.624701e-53 | -8.615850e-47 |
| Msa0288270 | Msa0344250 | 0.800926 | 1.146214e-48 | -8.615850e-47 |
| Msa0288280 | Msa0344250 | 0.804662 | 1.939439e-49 | -8.615850e-47 |
| Msa0301800 | Msa0344250 | 0.809006 | 2.341909e-50 | -8.615850e-47 |
| Msa0306130 | Msa0344250 | 0.809050 | 2.291391e-50 | -8.615850e-47 |
| Msa0307490 | Msa0344250 | 0.811247 | 7.701888e-51 | -8.615850e-47 |
| Msa0307750 | Msa0344250 | 0.802007 | 6.881308e-49 | -8.615850e-47 |
| Msa0309160 | Msa0344250 | 0.824746 | 6.830181e-54 | -8.615850e-47 |
| Msa0317630 | Msa0344250 | 0.824805 | 6.615532e-54 | -8.615850e-47 |
| Msa0321180 | Msa0344250 | 0.818093 | 2.346898e-52 | -8.615850e-47 |
| Msa0321200 | Msa0344250 | 0.820888 | 5.407036e-53 | -8.615850e-47 |
| Msa0324060 | Msa0344250 | 0.824761 | 6.775130e-54 | -8.615850e-47 |
| Msa0338900 | Msa0344250 | 0.831277 | 1.828387e-55 | -8.615850e-47 |
| Msa0344180 | Msa0344250 | 0.821579 | 3.746238e-53 | -8.615850e-47 |
| Msa0344190 | Msa0344250 | 0.834615 | 2.705912e-56 | -8.615850e-47 |
| Msa0344200 | Msa0344250 | 0.800541 | 1.373017e-48 | -8.615850e-47 |
| Msa0344240 | Msa0344250 | 0.852710 | 3.861052e-61 | -8.615850e-47 |
| Msa0344250 | Msa0344310 | 0.819845 | 9.375520e-53 | -8.615850e-47 |
| Msa0344250 | Msa0369750 | 0.811057 | 8.470105e-51 | -8.615850e-47 |
| Msa0344250 | Msa0370210 | 0.824050 | 9.954843e-54 | -8.615850e-47 |
| Msa0344250 | Msa0370510 | 0.803088 | 4.119345e-49 | -8.615850e-47 |
| Msa0344250 | Msa0372380 | 0.812005 | 5.270716e-51 | -8.615850e-47 |
| Msa0344250 | Msa0372550 | 0.800870 | 1.176812e-48 | -8.615850e-47 |
| Msa0344250 | Msa0377460 | 0.817660 | 2.939484e-52 | -8.615850e-47 |
| Msa0344250 | Msa0377690 | 0.815630 | 8.377523e-52 | -8.615850e-47 |
| Msa0344250 | Msa0379720 | 0.807124 | 5.891011e-50 | -8.615850e-47 |
| Msa0344250 | Msa0379900 | 0.803231 | 3.847410e-49 | -8.615850e-47 |
| Msa0344250 | Msa0386390 | 0.800061 | 1.719410e-48 | -8.615850e-47 |
| Msa0344250 | Msa0390950 | 0.819233 | 1.293113e-52 | -8.615850e-47 |
| Msa0344250 | Msa0398610 | 0.862655 | 4.345459e-64 | -8.615850e-47 |
| Msa0344250 | Msa0398630 | 0.802720 | 4.907090e-49 | -8.615850e-47 |
| Msa0344250 | Msa0426860 | 0.825915 | 3.612294e-54 | -8.615850e-47 |
| Msa0344250 | Msa0426890 | 0.832034 | 1.189698e-55 | -8.615850e-47 |
| Msa0344250 | Msa0426990 | 0.811975 | 5.349359e-51 | -8.615850e-47 |
| Msa0344250 | Msa0427050 | 0.826943 | 2.055799e-54 | -8.615850e-47 |
| Msa0344250 | Msa0429100 | 0.813347 | 2.680160e-51 | -8.615850e-47 |
| Msa0344250 | Msa0429130 | 0.803610 | 3.211170e-49 | -8.615850e-47 |
| Msa0344250 | Msa0443250 | 0.801075 | 1.068182e-48 | -8.615850e-47 |
| Msa0344250 | Msa0449900 | 0.901909 | 1.662853e-78 | -8.615850e-47 |
| Msa0344250 | Msa0449930 | 0.819134 | 1.362100e-52 | -8.615850e-47 |
| Msa0344250 | Msa0451370 | 0.810226 | 1.280766e-50 | -8.615850e-47 |
| Msa0344250 | Msa0464500 | 0.816240 | 6.123987e-52 | -8.615850e-47 |
| Msa0344250 | Msa0472870 | 0.825811 | 3.825042e-54 | -8.615850e-47 |
| Msa0344250 | Msa0473320 | 0.819979 | 8.738040e-53 | -8.615850e-47 |
| Msa0344250 | Msa0473450 | 0.825168 | 5.430483e-54 | -8.615850e-47 |
| Msa0344250 | Msa0475830 | 0.863250 | 2.847439e-64 | -8.615850e-47 |
| Msa0344250 | Msa0497060 | 0.801235 | 9.909143e-49 | -8.615850e-47 |
| Msa0344250 | Msa0509510 | 0.810310 | 1.228109e-50 | -8.615850e-47 |
| Msa0344250 | Msa0512770 | 0.819665 | 1.030602e-52 | -8.615850e-47 |
| Msa0344250 | Msa0515830 | 0.802189 | 6.312316e-49 | -8.615850e-47 |
| Msa0344250 | Msa0517400 | 0.815185 | 1.052523e-51 | -8.615850e-47 |
| Msa0344250 | Msa0539900 | 0.800784 | 1.225285e-48 | -8.615850e-47 |
| Msa0344250 | Msa0558220 | 0.818836 | 1.592262e-52 | -8.615850e-47 |
| Msa0344250 | Msa0558890 | 0.808275 | 3.355734e-50 | -8.615850e-47 |
| Msa0344250 | Msa0564000 | 0.835507 | 1.612130e-56 | -8.615850e-47 |
| Msa0344250 | Msa0565930 | 0.802806 | 4.710783e-49 | -8.615850e-47 |
| Msa0344250 | Msa0569630 | 0.800361 | 1.494170e-48 | -8.615850e-47 |
| Msa0344250 | Msa0571220 | 0.821934 | 3.100470e-53 | -8.615850e-47 |
| Msa0344250 | Msa0574230 | 0.837242 | 5.835612e-57 | -8.615850e-47 |
| Msa0344250 | Msa0574450 | 0.800213 | 1.601300e-48 | -8.615850e-47 |
| Msa0344250 | Msa0576510 | 0.839079 | 1.963890e-57 | -8.615850e-47 |
| Msa0344250 | Msa0577140 | 0.811164 | 8.029552e-51 | -8.615850e-47 |
| Msa0344250 | Msa0577910 | 0.813266 | 2.792343e-51 | -8.615850e-47 |
| Msa0344250 | Msa0582510 | 0.803194 | 3.916274e-49 | -8.615850e-47 |
| Msa0344250 | Msa0582530 | 0.804161 | 2.467012e-49 | -8.615850e-47 |
| Msa0344250 | Msa0582570 | 0.954398 | 3.237104e-112 | -8.615850e-47 |
| Msa0344250 | Msa0582580 | 0.935477 | 7.973076e-97 | -8.615850e-47 |
| Msa0344250 | Msa0582620 | 0.820997 | 5.101805e-53 | -8.615850e-47 |
| Msa0344250 | Msa0582630 | 0.800308 | 1.531698e-48 | -8.615850e-47 |
| Msa0344250 | Msa0582640 | 0.824721 | 6.922419e-54 | -8.615850e-47 |
| Msa0344250 | Msa0582660 | 0.820629 | 6.201945e-53 | -8.615850e-47 |
| Msa0344250 | Msa0582690 | 0.807087 | 5.998348e-50 | -8.615850e-47 |
| Msa0344250 | Msa0582700 | 0.802701 | 4.952233e-49 | -8.615850e-47 |
| Msa0344250 | Msa0582710 | 0.828503 | 8.670997e-55 | -8.615850e-47 |
| Msa0344250 | Msa0582740 | 0.825809 | 3.828978e-54 | -8.615850e-47 |
| Msa0344250 | Msa0582750 | 0.807300 | 5.408197e-50 | -8.615850e-47 |
| Msa0344250 | Msa0582760 | 0.822423 | 2.387699e-53 | -8.615850e-47 |
| Msa0344250 | Msa0582780 | 0.822449 | 2.354638e-53 | -8.615850e-47 |
| Msa0344250 | Msa0582810 | 0.804448 | 2.149985e-49 | -8.615850e-47 |
| Msa0344250 | Msa0582820 | 0.804862 | 1.761915e-49 | -8.615850e-47 |
| Msa0344250 | Msa0582830 | 0.827716 | 1.341629e-54 | -8.615850e-47 |
| Msa0344250 | Msa0582910 | 0.818903 | 1.537049e-52 | -8.615850e-47 |
| Msa0344250 | Msa0582930 | 0.847041 | 1.486253e-59 | -8.615850e-47 |
| Msa0344250 | Msa0583810 | 0.800246 | 1.576809e-48 | -8.615850e-47 |
| Msa0344250 | Msa0587060 | 0.823857 | 1.105033e-53 | -8.615850e-47 |
| Msa0344250 | Msa0591290 | 0.817915 | 2.573655e-52 | -8.615850e-47 |
| Msa0344250 | Msa0591370 | 0.859355 | 4.379663e-63 | -8.615850e-47 |
| Msa0344250 | Msa0591380 | 0.827587 | 1.440796e-54 | -8.615850e-47 |
| Msa0344250 | Msa0595240 | 0.830047 | 3.659590e-55 | -8.615850e-47 |
| Msa0344250 | Msa0606680 | 0.843727 | 1.172938e-58 | -8.615850e-47 |
| Msa0344250 | Msa0619060 | 0.801273 | 9.732938e-49 | -8.615850e-47 |
| Msa0344250 | Msa0619480 | 0.835219 | 1.906397e-56 | -8.615850e-47 |
| Msa0344250 | Msa0624260 | 0.801292 | 9.646592e-49 | -8.615850e-47 |
| Msa0344250 | Msa0626890 | 0.803078 | 4.139342e-49 | -8.615850e-47 |
| Msa0344250 | Msa0635990 | 0.828939 | 6.800404e-55 | -8.615850e-47 |
| Msa0344250 | Msa0638040 | 0.802539 | 5.346506e-49 | -8.615850e-47 |
| Msa0344250 | Msa0659640 | 0.852293 | 5.075417e-61 | -8.615850e-47 |
| Msa0344250 | Msa0665010 | 0.816867 | 4.431750e-52 | -8.615850e-47 |
| Msa0344250 | Msa0665040 | 0.809377 | 1.950333e-50 | -8.615850e-47 |
| Msa0344250 | Msa0668630 | 0.904731 | 9.033564e-80 | -8.615850e-47 |
| Msa0344250 | Msa0677110 | 0.805383 | 1.370474e-49 | -8.615850e-47 |
| Msa0344250 | Msa0687320 | 0.828332 | 9.536652e-55 | -8.615850e-47 |
| Msa0344250 | Msa0688350 | 0.825008 | 5.925328e-54 | -8.615850e-47 |
| Msa0344250 | Msa0700430 | 0.809994 | 1.437166e-50 | -8.615850e-47 |
| Msa0344250 | Msa0704750 | 0.817227 | 3.678199e-52 | -8.615850e-47 |
| Msa0344250 | Msa0706710 | 0.850378 | 1.765431e-60 | -8.615850e-47 |
| Msa0344250 | Msa0707870 | 0.844005 | 9.878046e-59 | -8.615850e-47 |
| Msa0344250 | Msa0708120 | 0.817552 | 3.108851e-52 | -8.615850e-47 |
| Msa0344250 | Msa0720850 | 0.809338 | 1.987614e-50 | -8.615850e-47 |
| Msa0344250 | Msa0727020 | 0.852925 | 3.351291e-61 | -8.615850e-47 |
| Msa0344250 | Msa0727040 | 0.840340 | 9.224464e-58 | -8.615850e-47 |
| Msa0344250 | Msa0729590 | 0.812807 | 3.520672e-51 | -8.615850e-47 |
| Msa0344250 | Msa0736330 | 0.850701 | 1.431964e-60 | -8.615850e-47 |
| Msa0344250 | Msa0736930 | 0.809704 | 1.659210e-50 | -8.615850e-47 |
| Msa0344250 | Msa0741600 | 0.814521 | 1.476920e-51 | -8.615850e-47 |
| Msa0344250 | Msa0762390 | 0.805805 | 1.117851e-49 | -8.615850e-47 |
| Msa0344250 | Msa0762470 | 0.810288 | 1.241891e-50 | -8.615850e-47 |
| Msa0344250 | Msa0766880 | 0.863518 | 2.351036e-64 | -8.615850e-47 |
| Msa0344250 | Msa0778060 | 0.832754 | 7.890161e-56 | -8.615850e-47 |
| Msa0344250 | Msa0804930 | 0.803699 | 3.077845e-49 | -8.615850e-47 |
| Msa0344250 | Msa0821490 | 0.831776 | 1.378138e-55 | -8.615850e-47 |
| Msa0344250 | Msa0833910 | 0.806292 | 8.830087e-50 | -8.615850e-47 |
| Msa0344250 | Msa0834160 | 0.806595 | 7.622876e-50 | -8.615850e-47 |
| Msa0344250 | Msa0839730 | 0.822348 | 2.485122e-53 | -8.615850e-47 |
| Msa0344250 | Msa0841980 | 0.815034 | 1.136660e-51 | -8.615850e-47 |
| Msa0344250 | Msa0855490 | 0.845495 | 3.919719e-59 | -8.615850e-47 |
| Msa0344250 | Msa0860270 | 0.805607 | 1.230082e-49 | -8.615850e-47 |
| Msa0344250 | Msa0880370 | 0.808641 | 2.802528e-50 | -8.615850e-47 |
| Msa0344250 | Msa0910650 | 0.800672 | 1.291544e-48 | -8.615850e-47 |
| Msa0344250 | Msa0924820 | 0.931439 | 3.773618e-94 | -8.615850e-47 |
| Msa0344250 | Msa0924870 | 0.822719 | 2.038000e-53 | -8.615850e-47 |
| Msa0344250 | Msa0924890 | 0.869280 | 3.485792e-66 | -8.615850e-47 |
| Msa0344250 | Msa0924970 | 0.889958 | 1.518705e-73 | -8.615850e-47 |
| Msa0344250 | Msa0925020 | 0.951818 | 9.133668e-110 | -8.615850e-47 |
| Msa0344250 | Msa0927890 | 0.807867 | 4.098229e-50 | -8.615850e-47 |
| Msa0344250 | Msa0930990 | 0.882193 | 1.278761e-70 | -8.615850e-47 |
| Msa0344250 | Msa0931070 | 0.817888 | 2.609981e-52 | -8.615850e-47 |
| Msa0344250 | Msa0931090 | 0.848830 | 4.773446e-60 | -8.615850e-47 |
| Msa0344250 | Msa0931100 | 0.820994 | 5.110444e-53 | -8.615850e-47 |
| Msa0344250 | Msa0931130 | 0.805290 | 1.433913e-49 | -8.615850e-47 |
| Msa0344250 | Msa0931150 | 0.825609 | 4.269821e-54 | -8.615850e-47 |
| Msa0344250 | Msa0931220 | 0.837326 | 5.553625e-57 | -8.615850e-47 |
| Msa0344250 | Msa0931240 | 0.815243 | 1.021636e-51 | -8.615850e-47 |
| Msa0344250 | Msa0931280 | 0.870942 | 9.960266e-67 | -8.615850e-47 |
| Msa0344250 | Msa0933050 | 0.810176 | 1.312640e-50 | -8.615850e-47 |
| Msa0344250 | Msa0945560 | 0.800813 | 1.208581e-48 | -8.615850e-47 |
| Msa0344250 | Msa0981300 | 0.817866 | 2.641043e-52 | -8.615850e-47 |
| Msa0344250 | Msa0983670 | 0.914710 | 1.392971e-84 | -8.615850e-47 |
| Msa0344250 | Msa0998940 | 0.822907 | 1.842708e-53 | -8.615850e-47 |
| Msa0344250 | Msa1007980 | 0.807114 | 5.921236e-50 | -8.615850e-47 |
| Msa0344250 | Msa1008960 | 0.815982 | 6.991379e-52 | -8.615850e-47 |
| Msa0344250 | Msa1016130 | 0.817475 | 3.234949e-52 | -8.615850e-47 |
| Msa0344250 | Msa1024580 | 0.803607 | 3.215372e-49 | -8.615850e-47 |
| Msa0344250 | Msa1033230 | 0.813709 | 2.230790e-51 | -8.615850e-47 |
| Msa0344250 | Msa1037570 | 0.821219 | 4.536202e-53 | -8.615850e-47 |
| Msa0344250 | Msa1038420 | 0.816874 | 4.414585e-52 | -8.615850e-47 |
| Msa0344250 | Msa1049440 | 0.847176 | 1.364428e-59 | -8.615850e-47 |
| Msa0344250 | Msa1051410 | 0.802150 | 6.432090e-49 | -8.615850e-47 |
| Msa0344250 | Msa1063180 | 0.819497 | 1.125712e-52 | -8.615850e-47 |
| Msa0344250 | Msa1068110 | 0.802536 | 5.355222e-49 | -8.615850e-47 |
| Msa0344250 | Msa1070930 | 0.811395 | 7.151728e-51 | -8.615850e-47 |
| Msa0344250 | Msa1072770 | 0.842489 | 2.506611e-58 | -8.615850e-47 |
| Msa0344250 | Msa1073140 | 0.801515 | 8.681541e-49 | -8.615850e-47 |
| Msa0344250 | Msa1079610 | 0.829052 | 6.385632e-55 | -8.615850e-47 |
| Msa0344250 | Msa1084630 | 0.800911 | 1.154117e-48 | -8.615850e-47 |
| Msa0344250 | Msa1086020 | 0.934371 | 4.481391e-96 | -8.615850e-47 |
| Msa0344250 | Msa1086060 | 0.834711 | 2.559475e-56 | -8.615850e-47 |
| Msa0344250 | Msa1086070 | 0.807951 | 3.932168e-50 | -8.615850e-47 |
| Msa0344250 | Msa1086080 | 0.841137 | 5.703637e-58 | -8.615850e-47 |
| Msa0344250 | Msa1086100 | 0.817288 | 3.564394e-52 | -8.615850e-47 |
| Msa0344250 | Msa1086160 | 0.882994 | 6.528514e-71 | -8.615850e-47 |
| Msa0344250 | Msa1086170 | 0.828527 | 8.557359e-55 | -8.615850e-47 |
| Msa0344250 | Msa1086180 | 0.805513 | 1.287143e-49 | -8.615850e-47 |
| Msa0344250 | Msa1086190 | 0.824004 | 1.020570e-53 | -8.615850e-47 |
| Msa0344250 | Msa1086210 | 0.813226 | 2.849941e-51 | -8.615850e-47 |
| Msa0344250 | Msa1086260 | 0.856026 | 4.247792e-62 | -8.615850e-47 |
| Msa0344250 | Msa1086270 | 0.803514 | 3.361842e-49 | -8.615850e-47 |
| Msa0344250 | Msa1086280 | 0.806713 | 7.196890e-50 | -8.615850e-47 |
| Msa0344250 | Msa1086290 | 0.841420 | 4.803857e-58 | -8.615850e-47 |
| Msa0344250 | Msa1086330 | 0.948888 | 3.847024e-107 | -8.615850e-47 |
| Msa0344250 | Msa1086340 | 0.902480 | 9.286923e-79 | -8.615850e-47 |
| Msa0344250 | Msa1086370 | 0.855024 | 8.323802e-62 | -8.615850e-47 |
| Msa0344250 | Msa1086410 | 0.869943 | 2.118534e-66 | -8.615850e-47 |
| Msa0344250 | Msa1086440 | 0.844859 | 5.821719e-59 | -8.615850e-47 |
| Msa0344250 | Msa1086480 | 0.837118 | 6.277867e-57 | -8.615850e-47 |
| Msa0344250 | Msa1086520 | 0.934946 | 1.832841e-96 | -8.615850e-47 |
| Msa0344250 | Msa1086630 | 0.951760 | 1.033591e-109 | -8.615850e-47 |
| Msa0344250 | Msa1086690 | 0.919603 | 3.661522e-87 | -8.615850e-47 |
| Msa0344250 | Msa1086830 | 0.955430 | 3.085879e-113 | -8.615850e-47 |
| Msa0344250 | Msa1086870 | 0.831742 | 1.405015e-55 | -8.615850e-47 |
| Msa0344250 | Msa1086890 | 0.814123 | 1.808554e-51 | -8.615850e-47 |
| Msa0344250 | Msa1086910 | 0.802511 | 5.418201e-49 | -8.615850e-47 |
| Msa0344250 | Msa1087000 | 0.869609 | 2.724136e-66 | -8.615850e-47 |
| Msa0344250 | Msa1090230 | 0.804958 | 1.682150e-49 | -8.615850e-47 |
| Msa0344250 | Msa1098070 | 0.809986 | 1.442425e-50 | -8.615850e-47 |
| Msa0344250 | Msa1108530 | 0.800029 | 1.745795e-48 | -8.615850e-47 |
| Msa0344250 | Msa1122480 | 0.821308 | 4.326020e-53 | -8.615850e-47 |
| Msa0344250 | Msa1123340 | 0.819279 | 1.262373e-52 | -8.615850e-47 |
| Msa0344250 | Msa1124180 | 0.808608 | 2.848840e-50 | -8.615850e-47 |
| Msa0344250 | Msa1124440 | 0.858444 | 8.204508e-63 | -8.615850e-47 |
| Msa0344250 | Msa1126910 | 0.804861 | 1.762883e-49 | -8.615850e-47 |
| Msa0344250 | Msa1130700 | 0.834711 | 2.559785e-56 | -8.615850e-47 |
| Msa0344250 | Msa1131010 | 0.824746 | 6.828597e-54 | -8.615850e-47 |
| Msa0344250 | Msa1132540 | 0.808092 | 3.670044e-50 | -8.615850e-47 |
| Msa0344250 | Msa1140940 | 0.816496 | 5.368281e-52 | -8.615850e-47 |
| Msa0344250 | Msa1143140 | 0.828823 | 7.258258e-55 | -8.615850e-47 |
| Msa0344250 | Msa1143160 | 0.829619 | 4.652335e-55 | -8.615850e-47 |
| Msa0344250 | Msa1157160 | 0.810633 | 1.045986e-50 | -8.615850e-47 |
| Msa0344250 | Msa1161120 | 0.818819 | 1.606001e-52 | -8.615850e-47 |
| Msa0344250 | Msa1164650 | 0.817574 | 3.072233e-52 | -8.615850e-47 |
| Msa0344250 | Msa1168130 | 0.833482 | 5.198514e-56 | -8.615850e-47 |
| Msa0344250 | Msa1173410 | 0.817723 | 2.844558e-52 | -8.615850e-47 |
| Msa0344250 | Msa1195860 | 0.823566 | 1.292583e-53 | -8.615850e-47 |
| Msa0344250 | Msa1198420 | 0.839935 | 1.176662e-57 | -8.615850e-47 |
| Msa0344250 | Msa1199690 | 0.842025 | 3.327044e-58 | -8.615850e-47 |
| Msa0344250 | Msa1204110 | 0.839804 | 1.272581e-57 | -8.615850e-47 |
| Msa0344250 | Msa1209390 | 0.803290 | 3.740540e-49 | -8.615850e-47 |
| Msa0344250 | Msa1209650 | 0.816398 | 5.645111e-52 | -8.615850e-47 |
| Msa0344250 | Msa1211100 | 0.823689 | 1.209934e-53 | -8.615850e-47 |
| Msa0344250 | Msa1211120 | 0.817582 | 3.059540e-52 | -8.615850e-47 |
| Msa0344250 | Msa1211880 | 0.853574 | 2.183638e-61 | -8.615850e-47 |
| Msa0344250 | Msa1215660 | 0.814731 | 1.327082e-51 | -8.615850e-47 |
| Msa0344250 | Msa1245300 | 0.827892 | 1.217165e-54 | -8.615850e-47 |
| Msa0344250 | Msa1246420 | 0.811129 | 8.169523e-51 | -8.615850e-47 |
| Msa0344250 | Msa1248400 | 0.804101 | 2.538946e-49 | -8.615850e-47 |
| Msa0344250 | Msa1251960 | 0.812736 | 3.648570e-51 | -8.615850e-47 |
| Msa0344250 | Msa1252040 | 0.857160 | 1.972225e-62 | -8.615850e-47 |
| Msa0344250 | Msa1264230 | 0.825377 | 4.845983e-54 | -8.615850e-47 |
| Msa0344250 | Msa1267800 | 0.824227 | 9.047795e-54 | -8.615850e-47 |
| Msa0344250 | Msa1279240 | 0.815165 | 1.063037e-51 | -8.615850e-47 |
| Msa0344250 | Msa1292700 | 0.801683 | 8.020708e-49 | -8.615850e-47 |
| Msa0344250 | Msa1302920 | 0.818647 | 1.757901e-52 | -8.615850e-47 |
| Msa0344250 | Msa1305090 | 0.806781 | 6.963954e-50 | -8.615850e-47 |
| Msa0344250 | Msa1316160 | 0.802285 | 6.031377e-49 | -8.615850e-47 |
| Msa0344250 | Msa1327820 | 0.808019 | 3.804258e-50 | -8.615850e-47 |
| Msa0344250 | Msa1332180 | 0.852401 | 4.730539e-61 | -8.615850e-47 |
| Msa0344250 | Msa1336350 | 0.816283 | 5.989700e-52 | -8.615850e-47 |
| Msa0344250 | Msa1343540 | 0.837340 | 5.506675e-57 | -8.615850e-47 |
| Msa0344250 | Msa1351560 | 0.818105 | 2.331696e-52 | -8.615850e-47 |
| Msa0344250 | Msa1354850 | 0.934475 | 3.812250e-96 | -8.615850e-47 |
| Msa0344250 | Msa1354890 | 0.804068 | 2.579324e-49 | -8.615850e-47 |
| Msa0344250 | Msa1354910 | 0.823377 | 1.431670e-53 | -8.615850e-47 |
| Msa0344250 | Msa1354930 | 0.819044 | 1.428004e-52 | -8.615850e-47 |
| Msa0344250 | Msa1355020 | 0.953700 | 1.537040e-111 | -8.615850e-47 |
| Msa0344250 | Msa1355060 | 0.810308 | 1.229636e-50 | -8.615850e-47 |
| Msa0344250 | Msa1355080 | 0.819770 | 9.752576e-53 | -8.615850e-47 |
| Msa0344250 | Msa1355100 | 0.823287 | 1.502507e-53 | -8.615850e-47 |
| Msa0344250 | Msa1361090 | 0.803986 | 2.682968e-49 | -8.615850e-47 |
| Msa0344250 | Msa1371250 | 0.852803 | 3.631006e-61 | -8.615850e-47 |
| Msa0344250 | Msa1373340 | 0.807161 | 5.785943e-50 | -8.615850e-47 |
| Msa0344250 | Msa1373590 | 0.826829 | 2.188603e-54 | -8.615850e-47 |
| Msa0344250 | Msa1374610 | 0.805052 | 1.607646e-49 | -8.615850e-47 |
| Msa0344250 | Msa1379370 | 0.801438 | 9.003453e-49 | -8.615850e-47 |
| Msa0344250 | Msa1380540 | 0.937945 | 1.514276e-98 | -8.615850e-47 |
| Msa0344250 | Msa1380600 | 0.860465 | 2.026361e-63 | -8.615850e-47 |
| Msa0344250 | Msa1380620 | 0.803601 | 3.225481e-49 | -8.615850e-47 |
| Msa0344250 | Msa1385940 | 0.850015 | 2.231124e-60 | -8.615850e-47 |
| Msa0344250 | Msa1387090 | 0.819066 | 1.411511e-52 | -8.615850e-47 |
| Msa0344250 | Msa1389990 | 0.835505 | 1.613419e-56 | -8.615850e-47 |
| Msa0344250 | Msa1390410 | 0.825204 | 5.326115e-54 | -8.615850e-47 |
| Msa0344250 | Msa1393600 | 0.855387 | 6.529456e-62 | -8.615850e-47 |
| Msa0344250 | Msa1394040 | 0.822537 | 2.246060e-53 | -8.615850e-47 |
| Msa0344250 | Msa1394060 | 0.800407 | 1.462623e-48 | -8.615850e-47 |
| Msa0344250 | Msa1394090 | 0.950934 | 5.878194e-109 | -8.615850e-47 |
| Msa0344250 | Msa1394100 | 0.934889 | 2.005200e-96 | -8.615850e-47 |
| Msa0344250 | Msa1394140 | 0.803293 | 3.735838e-49 | -8.615850e-47 |
| Msa0344250 | Msa1394150 | 0.815438 | 9.242748e-52 | -8.615850e-47 |
| Msa0344250 | Msa1394170 | 0.847012 | 1.513456e-59 | -8.615850e-47 |
| Msa0344250 | Msa1394210 | 0.832875 | 7.365997e-56 | -8.615850e-47 |
| Msa0344250 | Msa1394220 | 0.813262 | 2.797528e-51 | -8.615850e-47 |
| Msa0344250 | Msa1394230 | 0.808262 | 3.376497e-50 | -8.615850e-47 |
| Msa0344250 | Msa1394280 | 0.936934 | 7.835569e-98 | -8.615850e-47 |
| Msa0344250 | Msa1400330 | 0.801611 | 8.299193e-49 | -8.615850e-47 |
| Msa0344250 | Msa1400600 | 0.846335 | 2.316971e-59 | -8.615850e-47 |
| Msa0344250 | Msa1405190 | 0.832504 | 9.101716e-56 | -8.615850e-47 |
| Msa0344250 | Msa1414560 | 0.814659 | 1.376747e-51 | -8.615850e-47 |
| Msa0344250 | Msa1415120 | 0.850566 | 1.563002e-60 | -8.615850e-47 |
| Msa0344250 | Msa1425050 | 0.824122 | 9.578585e-54 | -8.615850e-47 |
| Msa0344250 | Msa1425110 | 0.805706 | 1.172877e-49 | -8.615850e-47 |
| Msa0344250 | Msa1426870 | 0.807905 | 4.021952e-50 | -8.615850e-47 |
| Msa0344250 | Msa1433650 | 0.839605 | 1.434092e-57 | -8.615850e-47 |
| Msa0344250 | Msa1438420 | 0.834797 | 2.434416e-56 | -8.615850e-47 |
| Msa0344250 | Msa1439160 | 0.850740 | 1.396974e-60 | -8.615850e-47 |
| Msa0344250 | Msa1454940 | 0.829573 | 4.771882e-55 | -8.615850e-47 |
| Msa0344250 | Msa1465410 | 0.819545 | 1.097835e-52 | -8.615850e-47 |
| Msa0344250 | Msa1466170 | 0.835657 | 1.477301e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344250 | MtrunA17_CPg0492781 | 98.333 | 60 | 1 | 0 | 46 | 105 | 7 | 66 | 1.14e-38 | 124 |
| Msa0344250 | MtrunA17_Chr4g0015791 | 98.333 | 60 | 1 | 0 | 46 | 105 | 7 | 66 | 1.14e-38 | 124 |
| Msa0344250 | MtrunA17_Chr8g0355601 | 96.610 | 59 | 2 | 0 | 46 | 104 | 7 | 65 | 1.73e-37 | 120 |
| Msa0344250 | MtrunA17_Chr7g0224991 | 95.455 | 44 | 2 | 0 | 62 | 105 | 6 | 49 | 7.95e-26 | 90.9 |
| Msa0344250 | MtrunA17_CPg0492791 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0344250 | MtrunA17_Chr4g0015781 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0344250 | MtrunA17_Chr4g0028951 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0344250 | MtrunA17_Chr8g0355611 | 93.750 | 32 | 2 | 0 | 15 | 46 | 1 | 32 | 2.06e-15 | 64.3 |
| Msa0344250 | MtrunA17_Chr4g0016881 | 96.774 | 31 | 1 | 0 | 15 | 45 | 1 | 31 | 5.83e-15 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0344250 | ATCG00640.1 | 75.000 | 60 | 15 | 0 | 46 | 105 | 7 | 66 | 2.13e-29 | 100 |
| Msa0344250 | ATCG00630.1 | 84.375 | 32 | 5 | 0 | 15 | 46 | 1 | 32 | 8.57e-13 | 58.2 |
Find 13 sgRNAs with CRISPR-Local
Find 114 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATACGAATAACTGTTATTT+TGG | 0.125276 | 3_1:-2736695 | Msa0344250:CDS |
| AGAGTGTTAATAAGGAATCT+AGG | 0.329597 | 3_1:-2736651 | Msa0344250:CDS |
| AATCGTATGTTTGCAACAAA+AGG | 0.396841 | 3_1:+2736555 | None:intergenic |
| CACCAGTGGCAAGTACTCTA+TGG | 0.426592 | 3_1:-2737321 | Msa0344250:CDS |
| GAGTGTTAATAAGGAATCTA+GGG | 0.452009 | 3_1:-2736650 | Msa0344250:CDS |
| CTATGGTTCGCGGTTCTAGC+AGG | 0.487956 | 3_1:-2737304 | Msa0344250:CDS |
| ACACAATACACCTAGTCGAT+TGG | 0.524208 | 3_1:-2736596 | Msa0344250:CDS |
| GGCAAGTACTCTATGGTTCG+CGG | 0.527936 | 3_1:-2737314 | Msa0344250:CDS |
| ATCGTATGTTTGCAACAAAA+GGG | 0.538893 | 3_1:+2736556 | None:intergenic |
| TTTCTCAATTCCAATCGACT+AGG | 0.574270 | 3_1:+2736586 | None:intergenic |
| ATATCTCTCTGTGGCACCAG+TGG | 0.585814 | 3_1:-2737335 | Msa0344250:CDS |
| AACCATAGAGTACTTGCCAC+TGG | 0.586013 | 3_1:+2737319 | None:intergenic |
| AGTGTTAATAAGGAATCTAG+GGG | 0.667965 | 3_1:-2736649 | Msa0344250:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAACTAGAATCAAAAAAA+GGG | + | chr3_1:2736696-2736715 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr3_1:2736819-2736838 | Msa0344250:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr3_1:2736913-2736932 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr3_1:2737069-2737088 | Msa0344250:intron | 15.0% |
| !! | AATAACTAGAATCAAAAAAA+GGG | + | chr3_1:2736696-2736715 | None:intergenic | 15.0% |
| !! | AGAGCAAATTAATTTAATAA+AGG | - | chr3_1:2736819-2736838 | Msa0344250:intron | 15.0% |
| !! | TATTATTAAATTCATAGCAA+TGG | + | chr3_1:2736913-2736932 | None:intergenic | 15.0% |
| !! | CTGTACTATATAAAATTAAT+TGG | - | chr3_1:2737069-2737088 | Msa0344250:intron | 15.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr3_1:2736544-2736563 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr3_1:2736543-2736562 | Msa0344250:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | + | chr3_1:2736695-2736714 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | chr3_1:2736697-2736716 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | chr3_1:2736695-2736714 | Msa0344250:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr3_1:2736750-2736769 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr3_1:2736822-2736841 | Msa0344250:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr3_1:2736828-2736847 | Msa0344250:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr3_1:2736944-2736963 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr3_1:2737233-2737252 | Msa0344250:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr3_1:2737269-2737288 | Msa0344250:intron | 20.0% |
| !!! | TTCGTTTTTTTCTTGTAATT+TGG | + | chr3_1:2736544-2736563 | None:intergenic | 20.0% |
| !! | AAATTACAAGAAAAAAACGA+AGG | - | chr3_1:2736543-2736562 | Msa0344250:CDS | 20.0% |
| !! | ATAACTAGAATCAAAAAAAG+GGG | + | chr3_1:2736695-2736714 | None:intergenic | 20.0% |
| !! | CAATAACTAGAATCAAAAAA+AGG | + | chr3_1:2736697-2736716 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGATTCTAGTTAT+TGG | - | chr3_1:2736695-2736714 | Msa0344250:CDS | 20.0% |
| !!! | AGAGGGATTTAATATTTTAT+TGG | + | chr3_1:2736750-2736769 | None:intergenic | 20.0% |
| !! | GCAAATTAATTTAATAAAGG+TGG | - | chr3_1:2736822-2736841 | Msa0344250:intron | 20.0% |
| !!! | TAATTTAATAAAGGTGGATT+TGG | - | chr3_1:2736828-2736847 | Msa0344250:intron | 20.0% |
| !! | TTCTATTACAATTCCATTTA+TGG | + | chr3_1:2736944-2736963 | None:intergenic | 20.0% |
| !!! | TATACGAATAACTGTTATTT+TGG | - | chr3_1:2737233-2737252 | Msa0344250:intron | 20.0% |
| !!! | TGATAAAAAGAGTGTTAATA+AGG | - | chr3_1:2737269-2737288 | Msa0344250:intron | 20.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr3_1:2736767-2736786 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr3_1:2736768-2736787 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr3_1:2736948-2736967 | Msa0344250:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr3_1:2736949-2736968 | Msa0344250:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr3_1:2737187-2737206 | Msa0344250:intron | 25.0% |
| ! | AAAAAAAAAACGAACGAAGA+GGG | + | chr3_1:2736767-2736786 | None:intergenic | 25.0% |
| ! | AAAAAAAAAAACGAACGAAG+AGG | + | chr3_1:2736768-2736787 | None:intergenic | 25.0% |
| ! | TGGAATTGTAATAGAATACT+TGG | - | chr3_1:2736948-2736967 | Msa0344250:intron | 25.0% |
| ! | GGAATTGTAATAGAATACTT+GGG | - | chr3_1:2736949-2736968 | Msa0344250:intron | 25.0% |
| ! | AGTGAATCAAAAAAAACCAA+AGG | - | chr3_1:2737187-2737206 | Msa0344250:intron | 25.0% |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr3_1:2736546-2736565 | Msa0344250:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr3_1:2736584-2736603 | Msa0344250:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr3_1:2736656-2736675 | Msa0344250:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr3_1:2736700-2736719 | Msa0344250:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr3_1:2736854-2736873 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr3_1:2736928-2736947 | Msa0344250:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr3_1:2736952-2736971 | Msa0344250:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr3_1:2737190-2737209 | Msa0344250:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr3_1:2737223-2737242 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr3_1:2737277-2737296 | Msa0344250:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr3_1:2737278-2737297 | Msa0344250:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr3_1:2737279-2737298 | Msa0344250:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr3_1:2737375-2737394 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr3_1:2737376-2737395 | None:intergenic | 30.0% | |
| TTACAAGAAAAAAACGAAGG+AGG | - | chr3_1:2736546-2736565 | Msa0344250:CDS | 30.0% | |
| TCTAAAAACATATCTCTCTG+TGG | - | chr3_1:2736584-2736603 | Msa0344250:CDS | 30.0% | |
| AGAAATCAATCGTTTATTCC+CGG | - | chr3_1:2736656-2736675 | Msa0344250:CDS | 30.0% | |
| ! | TTTGATTCTAGTTATTGGCA+CGG | - | chr3_1:2736700-2736719 | Msa0344250:intron | 30.0% |
| AAAAACTCCTAATTTCACTG+AGG | + | chr3_1:2736854-2736873 | None:intergenic | 30.0% | |
| TAATAGAGTGAGACCATAAA+TGG | - | chr3_1:2736928-2736947 | Msa0344250:intron | 30.0% | |
| ATTGTAATAGAATACTTGGG+CGG | - | chr3_1:2736952-2736971 | Msa0344250:intron | 30.0% | |
| GAATCAAAAAAAACCAAAGG+AGG | - | chr3_1:2737190-2737209 | Msa0344250:intron | 30.0% | |
| TATTCGTATATCTTTACCCT+TGG | + | chr3_1:2737223-2737242 | None:intergenic | 30.0% | |
| ! | AGAGTGTTAATAAGGAATCT+AGG | - | chr3_1:2737277-2737296 | Msa0344250:intron | 30.0% |
| GAGTGTTAATAAGGAATCTA+GGG | - | chr3_1:2737278-2737297 | Msa0344250:intron | 30.0% | |
| AGTGTTAATAAGGAATCTAG+GGG | - | chr3_1:2737279-2737298 | Msa0344250:intron | 30.0% | |
| ATCGTATGTTTGCAACAAAA+GGG | + | chr3_1:2737375-2737394 | None:intergenic | 30.0% | |
| AATCGTATGTTTGCAACAAA+AGG | + | chr3_1:2737376-2737395 | None:intergenic | 30.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr3_1:2736857-2736876 | Msa0344250:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr3_1:2736877-2736896 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr3_1:2736878-2736897 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr3_1:2736953-2736972 | Msa0344250:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr3_1:2737148-2737167 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr3_1:2737197-2737216 | Msa0344250:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr3_1:2737345-2737364 | None:intergenic | 35.0% | |
| ! | TGAAATTAGGAGTTTTTCCC+AGG | - | chr3_1:2736857-2736876 | Msa0344250:intron | 35.0% |
| CTTCAATTCCATTGAAACCT+GGG | + | chr3_1:2736877-2736896 | None:intergenic | 35.0% | |
| ACTTCAATTCCATTGAAACC+TGG | + | chr3_1:2736878-2736897 | None:intergenic | 35.0% | |
| TTGTAATAGAATACTTGGGC+GGG | - | chr3_1:2736953-2736972 | Msa0344250:intron | 35.0% | |
| TTCGAAGCGAAGAAGAAAAA+AGG | + | chr3_1:2737148-2737167 | None:intergenic | 35.0% | |
| AAAAAACCAAAGGAGGTTCA+TGG | - | chr3_1:2737197-2737216 | Msa0344250:intron | 35.0% | |
| TTTCTCAATTCCAATCGACT+AGG | + | chr3_1:2737345-2737364 | None:intergenic | 35.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr3_1:2736844-2736863 | Msa0344250:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr3_1:2736866-2736885 | Msa0344250:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr3_1:2737332-2737351 | Msa0344250:CDS | 40.0% | |
| GATTTGGCCTCAGTGAAATT+AGG | - | chr3_1:2736844-2736863 | Msa0344250:intron | 40.0% | |
| ! | GAGTTTTTCCCAGGTTTCAA+TGG | - | chr3_1:2736866-2736885 | Msa0344250:intron | 40.0% |
| ACACAATACACCTAGTCGAT+TGG | - | chr3_1:2737332-2737351 | Msa0344250:CDS | 40.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr3_1:2736612-2736631 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | chr3_1:2736678-2736697 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr3_1:2736705-2736724 | Msa0344250:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr3_1:2736706-2736725 | Msa0344250:intron | 45.0% | |
| ! | AACCATAGAGTACTTGCCAC+TGG | + | chr3_1:2736612-2736631 | None:intergenic | 45.0% |
| AAGGGGAATGTCAATGCATC+CGG | + | chr3_1:2736678-2736697 | None:intergenic | 45.0% | |
| ! | TTCTAGTTATTGGCACGGCA+AGG | - | chr3_1:2736705-2736724 | Msa0344250:intron | 45.0% |
| TCTAGTTATTGGCACGGCAA+GGG | - | chr3_1:2736706-2736725 | Msa0344250:intron | 45.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr3_1:2736593-2736612 | Msa0344250:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr3_1:2736607-2736626 | Msa0344250:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr3_1:2736614-2736633 | Msa0344250:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | chr3_1:2736677-2736696 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr3_1:2736707-2736726 | Msa0344250:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr3_1:2737204-2737223 | Msa0344250:intron | 50.0% | |
| ATATCTCTCTGTGGCACCAG+TGG | - | chr3_1:2736593-2736612 | Msa0344250:CDS | 50.0% | |
| CACCAGTGGCAAGTACTCTA+TGG | - | chr3_1:2736607-2736626 | Msa0344250:CDS | 50.0% | |
| GGCAAGTACTCTATGGTTCG+CGG | - | chr3_1:2736614-2736633 | Msa0344250:CDS | 50.0% | |
| AGGGGAATGTCAATGCATCC+GGG | + | chr3_1:2736677-2736696 | None:intergenic | 50.0% | |
| CTAGTTATTGGCACGGCAAG+GGG | - | chr3_1:2736707-2736726 | Msa0344250:intron | 50.0% | |
| CAAAGGAGGTTCATGGCCAA+GGG | - | chr3_1:2737204-2737223 | Msa0344250:intron | 50.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr3_1:2736624-2736643 | Msa0344250:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr3_1:2737206-2737225 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr3_1:2737203-2737222 | Msa0344250:intron | 55.0% | |
| ! | CTATGGTTCGCGGTTCTAGC+AGG | - | chr3_1:2736624-2736643 | Msa0344250:CDS | 55.0% |
| CCTTGGCCATGAACCTCCTT+TGG | + | chr3_1:2737206-2737225 | None:intergenic | 55.0% | |
| CCAAAGGAGGTTCATGGCCA+AGG | - | chr3_1:2737203-2737222 | Msa0344250:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 2736534 | 2737416 | 2736534 | ID=Msa0344250;Name=Msa0344250 |
| chr3_1 | mRNA | 2736534 | 2737416 | 2736534 | ID=Msa0344250-mRNA-1;Parent=Msa0344250;Name=Msa0344250-mRNA-1;_AED=0.44;_eAED=0.44;_QI=0|0|0|1|0|0|2|0|105 |
| chr3_1 | exon | 2737284 | 2737416 | 2737284 | ID=Msa0344250-mRNA-1:exon:889;Parent=Msa0344250-mRNA-1 |
| chr3_1 | exon | 2736534 | 2736718 | 2736534 | ID=Msa0344250-mRNA-1:exon:888;Parent=Msa0344250-mRNA-1 |
| chr3_1 | CDS | 2737284 | 2737416 | 2737284 | ID=Msa0344250-mRNA-1:cds;Parent=Msa0344250-mRNA-1 |
| chr3_1 | CDS | 2736534 | 2736718 | 2736534 | ID=Msa0344250-mRNA-1:cds;Parent=Msa0344250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
