AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1394100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394100 MtrunA17_Chr4g0015801 81.301 123 10 3 68 177 1 123 5.46e-50 157
Msa1394100 MtrunA17_CPg0492771 81.301 123 10 3 68 177 1 123 5.46e-50 157
Msa1394100 MtrunA17_Chr6g0466591 88.889 90 6 1 68 153 1 90 1.93e-48 153
Msa1394100 MtrunA17_Chr4g0016891 86.957 92 8 2 68 155 1 92 4.39e-45 144
Msa1394100 MtrunA17_Chr7g0237831 94.667 75 2 1 68 140 1 75 5.92e-41 132
Msa1394100 MtrunA17_Chr6g0465781 96.610 59 2 0 68 126 1 59 1.31e-33 113
Msa1394100 MtrunA17_CPg0492791 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1394100 MtrunA17_Chr4g0015781 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1394100 MtrunA17_Chr4g0028951 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1394100 MtrunA17_Chr8g0355611 100.000 30 0 0 15 44 1 30 2.84e-14 63.5
Msa1394100 MtrunA17_Chr4g0016881 100.000 30 0 0 15 44 1 30 5.50e-14 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394100 ATCG00650.1 70.909 110 23 2 68 177 1 101 8.00e-44 141
Msa1394100 ATCG00630.1 90.000 30 3 0 15 44 1 30 1.53e-11 57.0

Find 16 sgRNAs with CRISPR-Local

Find 168 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGTGTTAATAAGGAATCT+AGG 0.329597 tig0021785:-53716 Msa1394100:CDS
CACCAGTGGCAAGTACTCTA+TGG 0.426592 tig0021785:-54387 Msa1394100:CDS
GAGTGTTAATAAGGAATCTA+GGG 0.452009 tig0021785:-53715 Msa1394100:CDS
AGTTTGTCCCCGATCCAATC+GGG 0.455483 tig0021785:-53320 Msa1394100:CDS
GAGTTTGTCCCCGATCCAAT+CGG 0.465376 tig0021785:-53321 Msa1394100:CDS
CTATGGTTCGCGGTTCTAGC+AGG 0.487956 tig0021785:-54370 Msa1394100:CDS
AAAGGTGACGAATTAACAAA+AGG 0.521079 tig0021785:+53146 None:intergenic
GGCAAGTACTCTATGGTTCG+CGG 0.527936 tig0021785:-54380 Msa1394100:CDS
ATATCTCTCTGTGGCACCAG+TGG 0.585814 tig0021785:-54401 Msa1394100:CDS
GAGTCGCTTAGATTTATCCA+TGG 0.585856 tig0021785:+53373 None:intergenic
AACCATAGAGTACTTGCCAC+TGG 0.586013 tig0021785:+54385 None:intergenic
GTATAGGAATAAACAAACCA+TGG 0.629025 tig0021785:-53390 Msa1394100:CDS
TATCGACTTATTAGTCAACA+AGG 0.637963 tig0021785:-53263 Msa1394100:CDS
GTTTGTCCCCGATCCAATCG+GGG 0.647747 tig0021785:-53319 Msa1394100:CDS
TTTGTCCCCGATCCAATCGG+GGG 0.661952 tig0021785:-53318 Msa1394100:CDS
AGTGTTAATAAGGAATCTAG+GGG 0.667965 tig0021785:-53714 Msa1394100:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAGAATCAAAAAAA+GGG + tig0021785:53223-53242 None:intergenic 15.0%
!! AGAGCAAATTAATTTAATAA+AGG - tig0021785:53347-53366 Msa1394100:CDS 15.0%
!! TATTATTAAATTCATAGCAA+TGG + tig0021785:53441-53460 None:intergenic 15.0%
!! CTGTACTATATAAAATTAAT+TGG - tig0021785:53597-53616 Msa1394100:intron 15.0%
!!! AATCCTTTTTTTATAAGAAA+TGG - tig0021785:54100-54119 Msa1394100:intron 15.0%
!!! ATCCTTTTTTTATAAGAAAT+GGG - tig0021785:54101-54120 Msa1394100:intron 15.0%
!!! TTTTTTTCATTATTCACAAA+AGG + tig0021785:54396-54415 None:intergenic 15.0%
!! AATAACTAGAATCAAAAAAA+GGG + tig0021785:53223-53242 None:intergenic 15.0%
!! AGAGCAAATTAATTTAATAA+AGG - tig0021785:53347-53366 Msa1394100:CDS 15.0%
!! TATTATTAAATTCATAGCAA+TGG + tig0021785:53441-53460 None:intergenic 15.0%
!! CTGTACTATATAAAATTAAT+TGG - tig0021785:53597-53616 Msa1394100:intron 15.0%
!!! AATCCTTTTTTTATAAGAAA+TGG - tig0021785:54100-54119 Msa1394100:intron 15.0%
!!! ATCCTTTTTTTATAAGAAAT+GGG - tig0021785:54101-54120 Msa1394100:intron 15.0%
!!! TTTTTTTCATTATTCACAAA+AGG + tig0021785:54396-54415 None:intergenic 15.0%
!!! TTCGTTTTTTTCTTGTAATT+TGG + tig0021785:53071-53090 None:intergenic 20.0%
!! AAATTACAAGAAAAAAACGA+AGG - tig0021785:53070-53089 Msa1394100:CDS 20.0%
!! ATAACTAGAATCAAAAAAAG+GGG + tig0021785:53222-53241 None:intergenic 20.0%
!! CAATAACTAGAATCAAAAAA+AGG + tig0021785:53224-53243 None:intergenic 20.0%
!!! CTTTTTTTGATTCTAGTTAT+TGG - tig0021785:53222-53241 Msa1394100:CDS 20.0%
!!! AGAGGGATTTAATATTTTAT+TGG + tig0021785:53277-53296 None:intergenic 20.0%
!! GCAAATTAATTTAATAAAGG+TGG - tig0021785:53350-53369 Msa1394100:CDS 20.0%
!!! TAATTTAATAAAGGTGGATT+TGG - tig0021785:53356-53375 Msa1394100:CDS 20.0%
!! TTCTATTACAATTCCATTTA+TGG + tig0021785:53472-53491 None:intergenic 20.0%
!!! TATACGAATAACTGTTATTT+TGG - tig0021785:53761-53780 Msa1394100:intron 20.0%
!!! TGATAAAAAGAGTGTTAATA+AGG - tig0021785:53797-53816 Msa1394100:intron 20.0%
!! AGATAAAGAAATAGAGAAAA+TGG - tig0021785:53931-53950 Msa1394100:intron 20.0%
!! ATCCCATTTCTTATAAAAAA+AGG + tig0021785:54106-54125 None:intergenic 20.0%
!!! TTTATAAGAAATGGGATTTT+CGG - tig0021785:54109-54128 Msa1394100:intron 20.0%
!!! AATTAATCGTTGTTGTTTTA+AGG + tig0021785:54316-54335 None:intergenic 20.0%
!!! TTTTTTTTTAGAACAGTAGT+AGG + tig0021785:54453-54472 None:intergenic 20.0%
!!! TTCGTTTTTTTCTTGTAATT+TGG + tig0021785:53071-53090 None:intergenic 20.0%
!! AAATTACAAGAAAAAAACGA+AGG - tig0021785:53070-53089 Msa1394100:CDS 20.0%
!! ATAACTAGAATCAAAAAAAG+GGG + tig0021785:53222-53241 None:intergenic 20.0%
!! CAATAACTAGAATCAAAAAA+AGG + tig0021785:53224-53243 None:intergenic 20.0%
!!! CTTTTTTTGATTCTAGTTAT+TGG - tig0021785:53222-53241 Msa1394100:CDS 20.0%
!!! AGAGGGATTTAATATTTTAT+TGG + tig0021785:53277-53296 None:intergenic 20.0%
!! GCAAATTAATTTAATAAAGG+TGG - tig0021785:53350-53369 Msa1394100:CDS 20.0%
!!! TAATTTAATAAAGGTGGATT+TGG - tig0021785:53356-53375 Msa1394100:CDS 20.0%
!! TTCTATTACAATTCCATTTA+TGG + tig0021785:53472-53491 None:intergenic 20.0%
!!! TATACGAATAACTGTTATTT+TGG - tig0021785:53761-53780 Msa1394100:intron 20.0%
!!! TGATAAAAAGAGTGTTAATA+AGG - tig0021785:53797-53816 Msa1394100:intron 20.0%
!! AGATAAAGAAATAGAGAAAA+TGG - tig0021785:53931-53950 Msa1394100:intron 20.0%
!! ATCCCATTTCTTATAAAAAA+AGG + tig0021785:54106-54125 None:intergenic 20.0%
!!! TTTATAAGAAATGGGATTTT+CGG - tig0021785:54109-54128 Msa1394100:intron 20.0%
!!! AATTAATCGTTGTTGTTTTA+AGG + tig0021785:54316-54335 None:intergenic 20.0%
!!! TTTTTTTTTAGAACAGTAGT+AGG + tig0021785:54453-54472 None:intergenic 20.0%
! AAAAAAAAAACGAACGAAGA+GGG + tig0021785:53294-53313 None:intergenic 25.0%
! AAAAAAAAAAACGAACGAAG+AGG + tig0021785:53295-53314 None:intergenic 25.0%
! TGGAATTGTAATAGAATACT+TGG - tig0021785:53476-53495 Msa1394100:intron 25.0%
! GGAATTGTAATAGAATACTT+GGG - tig0021785:53477-53496 Msa1394100:intron 25.0%
! AGTGAATCAAAAAAAACCAA+AGG - tig0021785:53715-53734 Msa1394100:CDS 25.0%
! TTATAGAATTTACCTCCTAA+GGG + tig0021785:53972-53991 None:intergenic 25.0%
! TTTATAGAATTTACCTCCTA+AGG + tig0021785:53973-53992 None:intergenic 25.0%
! AAAAAAAAAACGAACGAAGA+GGG + tig0021785:53294-53313 None:intergenic 25.0%
! AAAAAAAAAAACGAACGAAG+AGG + tig0021785:53295-53314 None:intergenic 25.0%
! TGGAATTGTAATAGAATACT+TGG - tig0021785:53476-53495 Msa1394100:intron 25.0%
! GGAATTGTAATAGAATACTT+GGG - tig0021785:53477-53496 Msa1394100:intron 25.0%
! AGTGAATCAAAAAAAACCAA+AGG - tig0021785:53715-53734 Msa1394100:CDS 25.0%
! TTATAGAATTTACCTCCTAA+GGG + tig0021785:53972-53991 None:intergenic 25.0%
! TTTATAGAATTTACCTCCTA+AGG + tig0021785:53973-53992 None:intergenic 25.0%
TTACAAGAAAAAAACGAAGG+AGG - tig0021785:53073-53092 Msa1394100:CDS 30.0%
TCTAAAAACATATCTCTCTG+TGG - tig0021785:53111-53130 Msa1394100:CDS 30.0%
AGAAATCAATCGTTTATTCC+CGG - tig0021785:53183-53202 Msa1394100:CDS 30.0%
! TTTGATTCTAGTTATTGGCA+CGG - tig0021785:53227-53246 Msa1394100:CDS 30.0%
AAAAACTCCTAATTTCACTG+AGG + tig0021785:53382-53401 None:intergenic 30.0%
TAATAGAGTGAGACCATAAA+TGG - tig0021785:53456-53475 Msa1394100:intron 30.0%
ATTGTAATAGAATACTTGGG+CGG - tig0021785:53480-53499 Msa1394100:intron 30.0%
GAATCAAAAAAAACCAAAGG+AGG - tig0021785:53718-53737 Msa1394100:CDS 30.0%
TATTCGTATATCTTTACCCT+TGG + tig0021785:53751-53770 None:intergenic 30.0%
! AGAGTGTTAATAAGGAATCT+AGG - tig0021785:53805-53824 Msa1394100:intron 30.0%
GAGTGTTAATAAGGAATCTA+GGG - tig0021785:53806-53825 Msa1394100:intron 30.0%
AGTGTTAATAAGGAATCTAG+GGG - tig0021785:53807-53826 Msa1394100:intron 30.0%
ATCGTATGTTTGCAACAAAA+GGG + tig0021785:53903-53922 None:intergenic 30.0%
AATCGTATGTTTGCAACAAA+AGG + tig0021785:53904-53923 None:intergenic 30.0%
GTATAGGAATAAACAAACCA+TGG - tig0021785:54131-54150 Msa1394100:intron 30.0%
! AATCTAAGCAATCTTTTCGT+AGG - tig0021785:54178-54197 Msa1394100:intron 30.0%
!! TATCGACTTATTAGTCAACA+AGG - tig0021785:54258-54277 Msa1394100:intron 30.0%
AAAGGTGACGAATTAACAAA+AGG + tig0021785:54378-54397 None:intergenic 30.0%
TTACAAGAAAAAAACGAAGG+AGG - tig0021785:53073-53092 Msa1394100:CDS 30.0%
TCTAAAAACATATCTCTCTG+TGG - tig0021785:53111-53130 Msa1394100:CDS 30.0%
AGAAATCAATCGTTTATTCC+CGG - tig0021785:53183-53202 Msa1394100:CDS 30.0%
! TTTGATTCTAGTTATTGGCA+CGG - tig0021785:53227-53246 Msa1394100:CDS 30.0%
AAAAACTCCTAATTTCACTG+AGG + tig0021785:53382-53401 None:intergenic 30.0%
TAATAGAGTGAGACCATAAA+TGG - tig0021785:53456-53475 Msa1394100:intron 30.0%
ATTGTAATAGAATACTTGGG+CGG - tig0021785:53480-53499 Msa1394100:intron 30.0%
GAATCAAAAAAAACCAAAGG+AGG - tig0021785:53718-53737 Msa1394100:CDS 30.0%
TATTCGTATATCTTTACCCT+TGG + tig0021785:53751-53770 None:intergenic 30.0%
! AGAGTGTTAATAAGGAATCT+AGG - tig0021785:53805-53824 Msa1394100:intron 30.0%
GAGTGTTAATAAGGAATCTA+GGG - tig0021785:53806-53825 Msa1394100:intron 30.0%
AGTGTTAATAAGGAATCTAG+GGG - tig0021785:53807-53826 Msa1394100:intron 30.0%
ATCGTATGTTTGCAACAAAA+GGG + tig0021785:53903-53922 None:intergenic 30.0%
AATCGTATGTTTGCAACAAA+AGG + tig0021785:53904-53923 None:intergenic 30.0%
GTATAGGAATAAACAAACCA+TGG - tig0021785:54131-54150 Msa1394100:intron 30.0%
! AATCTAAGCAATCTTTTCGT+AGG - tig0021785:54178-54197 Msa1394100:intron 30.0%
!! TATCGACTTATTAGTCAACA+AGG - tig0021785:54258-54277 Msa1394100:intron 30.0%
AAAGGTGACGAATTAACAAA+AGG + tig0021785:54378-54397 None:intergenic 30.0%
! TGAAATTAGGAGTTTTTCCC+AGG - tig0021785:53385-53404 Msa1394100:CDS 35.0%
CTTCAATTCCATTGAAACCT+GGG + tig0021785:53405-53424 None:intergenic 35.0%
ACTTCAATTCCATTGAAACC+TGG + tig0021785:53406-53425 None:intergenic 35.0%
TTGTAATAGAATACTTGGGC+GGG - tig0021785:53481-53500 Msa1394100:intron 35.0%
TTCGAAGCGAAGAAGAAAAA+AGG + tig0021785:53676-53695 None:intergenic 35.0%
AAAAAACCAAAGGAGGTTCA+TGG - tig0021785:53725-53744 Msa1394100:CDS 35.0%
TTTCTCAATTCCAATCGACT+AGG + tig0021785:53873-53892 None:intergenic 35.0%
! AGAAATGGGATTTTCGGTAT+AGG - tig0021785:54115-54134 Msa1394100:intron 35.0%
! TGAAATTAGGAGTTTTTCCC+AGG - tig0021785:53385-53404 Msa1394100:CDS 35.0%
CTTCAATTCCATTGAAACCT+GGG + tig0021785:53405-53424 None:intergenic 35.0%
ACTTCAATTCCATTGAAACC+TGG + tig0021785:53406-53425 None:intergenic 35.0%
TTGTAATAGAATACTTGGGC+GGG - tig0021785:53481-53500 Msa1394100:intron 35.0%
TTCGAAGCGAAGAAGAAAAA+AGG + tig0021785:53676-53695 None:intergenic 35.0%
AAAAAACCAAAGGAGGTTCA+TGG - tig0021785:53725-53744 Msa1394100:CDS 35.0%
TTTCTCAATTCCAATCGACT+AGG + tig0021785:53873-53892 None:intergenic 35.0%
! AGAAATGGGATTTTCGGTAT+AGG - tig0021785:54115-54134 Msa1394100:intron 35.0%
GATTTGGCCTCAGTGAAATT+AGG - tig0021785:53372-53391 Msa1394100:CDS 40.0%
! GAGTTTTTCCCAGGTTTCAA+TGG - tig0021785:53394-53413 Msa1394100:CDS 40.0%
ACACAATACACCTAGTCGAT+TGG - tig0021785:53860-53879 Msa1394100:intron 40.0%
ATTGTTTGTGTGTCACCCTT+AGG - tig0021785:53954-53973 Msa1394100:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG + tig0021785:54151-54170 None:intergenic 40.0%
GATTTGGCCTCAGTGAAATT+AGG - tig0021785:53372-53391 Msa1394100:CDS 40.0%
! GAGTTTTTCCCAGGTTTCAA+TGG - tig0021785:53394-53413 Msa1394100:CDS 40.0%
ACACAATACACCTAGTCGAT+TGG - tig0021785:53860-53879 Msa1394100:intron 40.0%
ATTGTTTGTGTGTCACCCTT+AGG - tig0021785:53954-53973 Msa1394100:intron 40.0%
GAGTCGCTTAGATTTATCCA+TGG + tig0021785:54151-54170 None:intergenic 40.0%
! AACCATAGAGTACTTGCCAC+TGG + tig0021785:53139-53158 None:intergenic 45.0%
AAGGGGAATGTCAATGCATC+CGG + tig0021785:53205-53224 None:intergenic 45.0%
! TTCTAGTTATTGGCACGGCA+AGG - tig0021785:53232-53251 Msa1394100:CDS 45.0%
TCTAGTTATTGGCACGGCAA+GGG - tig0021785:53233-53252 Msa1394100:CDS 45.0%
AATCAATTCGATCCCCCGAT+TGG + tig0021785:54218-54237 None:intergenic 45.0%
! AACCATAGAGTACTTGCCAC+TGG + tig0021785:53139-53158 None:intergenic 45.0%
AAGGGGAATGTCAATGCATC+CGG + tig0021785:53205-53224 None:intergenic 45.0%
! TTCTAGTTATTGGCACGGCA+AGG - tig0021785:53232-53251 Msa1394100:CDS 45.0%
TCTAGTTATTGGCACGGCAA+GGG - tig0021785:53233-53252 Msa1394100:CDS 45.0%
AATCAATTCGATCCCCCGAT+TGG + tig0021785:54218-54237 None:intergenic 45.0%
!!! ATATTTATATTTGTTATATA+AGG + tig0021785:54045-54064 None:intergenic 5.0%
!!! ATATTTATATTTGTTATATA+AGG + tig0021785:54045-54064 None:intergenic 5.0%
ATATCTCTCTGTGGCACCAG+TGG - tig0021785:53120-53139 Msa1394100:CDS 50.0%
CACCAGTGGCAAGTACTCTA+TGG - tig0021785:53134-53153 Msa1394100:CDS 50.0%
GGCAAGTACTCTATGGTTCG+CGG - tig0021785:53141-53160 Msa1394100:CDS 50.0%
AGGGGAATGTCAATGCATCC+GGG + tig0021785:53204-53223 None:intergenic 50.0%
CTAGTTATTGGCACGGCAAG+GGG - tig0021785:53234-53253 Msa1394100:CDS 50.0%
CAAAGGAGGTTCATGGCCAA+GGG - tig0021785:53732-53751 Msa1394100:intron 50.0%
GTTTGTGTGTCACCCTTAGG+AGG - tig0021785:53957-53976 Msa1394100:intron 50.0%
GAGTTTGTCCCCGATCCAAT+CGG - tig0021785:54200-54219 Msa1394100:intron 50.0%
AGTTTGTCCCCGATCCAATC+GGG - tig0021785:54201-54220 Msa1394100:intron 50.0%
ATTCGATCCCCCGATTGGAT+CGG + tig0021785:54213-54232 None:intergenic 50.0%
ATATCTCTCTGTGGCACCAG+TGG - tig0021785:53120-53139 Msa1394100:CDS 50.0%
CACCAGTGGCAAGTACTCTA+TGG - tig0021785:53134-53153 Msa1394100:CDS 50.0%
GGCAAGTACTCTATGGTTCG+CGG - tig0021785:53141-53160 Msa1394100:CDS 50.0%
AGGGGAATGTCAATGCATCC+GGG + tig0021785:53204-53223 None:intergenic 50.0%
CTAGTTATTGGCACGGCAAG+GGG - tig0021785:53234-53253 Msa1394100:CDS 50.0%
CAAAGGAGGTTCATGGCCAA+GGG - tig0021785:53732-53751 Msa1394100:intron 50.0%
GTTTGTGTGTCACCCTTAGG+AGG - tig0021785:53957-53976 Msa1394100:intron 50.0%
GAGTTTGTCCCCGATCCAAT+CGG - tig0021785:54200-54219 Msa1394100:intron 50.0%
AGTTTGTCCCCGATCCAATC+GGG - tig0021785:54201-54220 Msa1394100:intron 50.0%
ATTCGATCCCCCGATTGGAT+CGG + tig0021785:54213-54232 None:intergenic 50.0%
! CTATGGTTCGCGGTTCTAGC+AGG - tig0021785:53151-53170 Msa1394100:CDS 55.0%
CCTTGGCCATGAACCTCCTT+TGG + tig0021785:53734-53753 None:intergenic 55.0%
CCAAAGGAGGTTCATGGCCA+AGG - tig0021785:53731-53750 Msa1394100:intron 55.0%
GTTTGTCCCCGATCCAATCG+GGG - tig0021785:54202-54221 Msa1394100:intron 55.0%
TTTGTCCCCGATCCAATCGG+GGG - tig0021785:54203-54222 Msa1394100:intron 55.0%
TTCGATCCCCCGATTGGATC+GGG + tig0021785:54212-54231 None:intergenic 55.0%
! CTATGGTTCGCGGTTCTAGC+AGG - tig0021785:53151-53170 Msa1394100:CDS 55.0%
CCTTGGCCATGAACCTCCTT+TGG + tig0021785:53734-53753 None:intergenic 55.0%
CCAAAGGAGGTTCATGGCCA+AGG - tig0021785:53731-53750 Msa1394100:intron 55.0%
GTTTGTCCCCGATCCAATCG+GGG - tig0021785:54202-54221 Msa1394100:intron 55.0%
TTTGTCCCCGATCCAATCGG+GGG - tig0021785:54203-54222 Msa1394100:intron 55.0%
TTCGATCCCCCGATTGGATC+GGG + tig0021785:54212-54231 None:intergenic 55.0%
TCGATCCCCCGATTGGATCG+GGG + tig0021785:54211-54230 None:intergenic 60.0%
TCGATCCCCCGATTGGATCG+GGG + tig0021785:54211-54230 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0021785 gene 53061 54482 53061 ID=Msa1394100;Name=Msa1394100
tig0021785 mRNA 53061 54482 53061 ID=Msa1394100-mRNA-1;Parent=Msa1394100;Name=Msa1394100-mRNA-1;_AED=0.31;_eAED=0.36;_QI=0|0|0|1|0|0|3|0|177
tig0021785 exon 54350 54482 54350 ID=Msa1394100-mRNA-1:exon:14236;Parent=Msa1394100-mRNA-1
tig0021785 exon 53715 53749 53715 ID=Msa1394100-mRNA-1:exon:14235;Parent=Msa1394100-mRNA-1
tig0021785 exon 53061 53426 53061 ID=Msa1394100-mRNA-1:exon:14234;Parent=Msa1394100-mRNA-1
tig0021785 CDS 54350 54482 54350 ID=Msa1394100-mRNA-1:cds;Parent=Msa1394100-mRNA-1
tig0021785 CDS 53715 53749 53715 ID=Msa1394100-mRNA-1:cds;Parent=Msa1394100-mRNA-1
tig0021785 CDS 53061 53426 53061 ID=Msa1394100-mRNA-1:cds;Parent=Msa1394100-mRNA-1
Gene Sequence

>Msa1394100

ATGTATTCCAAATTACAAGAAAAAAACGAAGGAGGATTTGAAATGCGAGATCTAAAAACATATCTCTCTGTGGCACCAGTGGCAAGTACTCTATGGTTCGCGGTTCTAGCAGGTCTCTTGATAGAAATCAATCTTGTGATAAAAAGAGTGTTAATAAGGAATCTAGGGAAATGGGATTTTCGGTATAGGAATAAACAAACCATGGATAAATCTAAGCGACTCTTTCTTAAATCTAAGCAATCTTTTCGTAGGAGTTTGTCCCCGATCCAATCGGGGGATCGAATTGATTATAAAAACATGAGTTTACTTTATCGACTTATTAGTCAACAAGGAAAAATATTATCTAGACGCGTGAATAGATCAACCTTAAAACAACAACGATTAATTACGATTGCTATAAAACAAGCTCGTATTTTATCTTTGTTACCTTTTGTTAATTCGTCACCTTTTGTGAATAATGAAAAAAAAAAATATGAAAAAAGCGAGTCGATCACTAGAACTCCTACTACTGTTCTAAAAAAAAACAAAAAATAG

Protein sequence

>Msa1394100

MYSKLQEKNEGGFEMRDLKTYLSVAPVASTLWFAVLAGLLIEINLVIKRVLIRNLGKWDFRYRNKQTMDKSKRLFLKSKQSFRRSLSPIQSGDRIDYKNMSLLYRLISQQGKILSRRVNRSTLKQQRLITIAIKQARILSLLPFVNSSPFVNNEKKKYEKSESITRTPTTVLKKNKK*