Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34168.t1 | XP_003618281.2 | 98.5 | 271 | 3 | 1 | 1 | 270 | 72 | 342 | 8.00E-150 | 539.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34168.t1 | P17067 | 95.8 | 259 | 11 | 0 | 1 | 259 | 70 | 328 | 9.6e-144 | 510.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34168.t1 | A0A3Q7K750 | 95.2 | 270 | 13 | 0 | 1 | 270 | 75 | 344 | 4.1e-148 | 533.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene34168 | 0.923901 | 1.44E-89 | -1.69E-46 |
| MS.gene049173 | MS.gene34168 | 0.8604 | 2.12E-63 | -1.69E-46 |
| MS.gene049217 | MS.gene34168 | 0.857884 | 1.20E-62 | -1.69E-46 |
| MS.gene049222 | MS.gene34168 | 0.904274 | 1.46E-79 | -1.69E-46 |
| MS.gene049232 | MS.gene34168 | 0.906078 | 2.18E-80 | -1.69E-46 |
| MS.gene049285 | MS.gene34168 | 0.950863 | 6.82E-109 | -1.69E-46 |
| MS.gene049320 | MS.gene34168 | 0.956808 | 1.23E-114 | -1.69E-46 |
| MS.gene04939 | MS.gene34168 | 0.830121 | 3.51E-55 | -1.69E-46 |
| MS.gene049600 | MS.gene34168 | 0.827837 | 1.25E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene34168 | 0.872365 | 3.36E-67 | -1.69E-46 |
| MS.gene049627 | MS.gene34168 | 0.825057 | 5.77E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene34168 | 0.889676 | 1.96E-73 | -1.69E-46 |
| MS.gene049805 | MS.gene34168 | 0.835783 | 1.37E-56 | -1.69E-46 |
| MS.gene049865 | MS.gene34168 | 0.813905 | 2.02E-51 | -1.69E-46 |
| MS.gene04986 | MS.gene34168 | -0.809096 | 2.24E-50 | -1.69E-46 |
| MS.gene05010 | MS.gene34168 | 0.934511 | 3.61E-96 | -1.69E-46 |
| MS.gene050163 | MS.gene34168 | 0.910562 | 1.63E-82 | -1.69E-46 |
| MS.gene050165 | MS.gene34168 | 0.911465 | 5.90E-83 | -1.69E-46 |
| MS.gene050170 | MS.gene34168 | 0.896418 | 3.76E-76 | -1.69E-46 |
| MS.gene050216 | MS.gene34168 | 0.855579 | 5.74E-62 | -1.69E-46 |
| MS.gene050323 | MS.gene34168 | 0.916856 | 1.08E-85 | -1.69E-46 |
| MS.gene050333 | MS.gene34168 | 0.909882 | 3.48E-82 | -1.69E-46 |
| MS.gene050381 | MS.gene34168 | -0.810386 | 1.18E-50 | -1.69E-46 |
| MS.gene050444 | MS.gene34168 | 0.835494 | 1.62E-56 | -1.69E-46 |
| MS.gene050496 | MS.gene34168 | 0.914813 | 1.23E-84 | -1.69E-46 |
| MS.gene050502 | MS.gene34168 | 0.814123 | 1.81E-51 | -1.69E-46 |
| MS.gene050504 | MS.gene34168 | 0.945706 | 1.85E-104 | -1.69E-46 |
| MS.gene050518 | MS.gene34168 | 0.935012 | 1.65E-96 | -1.69E-46 |
| MS.gene050538 | MS.gene34168 | 0.806161 | 9.41E-50 | -1.69E-46 |
| MS.gene050577 | MS.gene34168 | 0.907319 | 5.76E-81 | -1.69E-46 |
| MS.gene050593 | MS.gene34168 | 0.817862 | 2.65E-52 | -1.69E-46 |
| MS.gene050612 | MS.gene34168 | 0.957186 | 4.97E-115 | -1.69E-46 |
| MS.gene050662 | MS.gene34168 | 0.841577 | 4.37E-58 | -1.69E-46 |
| MS.gene050675 | MS.gene34168 | 0.919429 | 4.55E-87 | -1.69E-46 |
| MS.gene050697 | MS.gene34168 | 0.801749 | 7.77E-49 | -1.69E-46 |
| MS.gene050699 | MS.gene34168 | 0.939538 | 1.08E-99 | -1.69E-46 |
| MS.gene050747 | MS.gene34168 | 0.86552 | 5.56E-65 | -1.69E-46 |
| MS.gene050772 | MS.gene34168 | 0.918635 | 1.22E-86 | -1.69E-46 |
| MS.gene05080 | MS.gene34168 | 0.875194 | 3.73E-68 | -1.69E-46 |
| MS.gene050868 | MS.gene34168 | 0.893281 | 7.28E-75 | -1.69E-46 |
| MS.gene050871 | MS.gene34168 | 0.891273 | 4.62E-74 | -1.69E-46 |
| MS.gene050876 | MS.gene34168 | 0.879955 | 8.17E-70 | -1.69E-46 |
| MS.gene050883 | MS.gene34168 | -0.817465 | 3.25E-52 | -1.69E-46 |
| MS.gene050904 | MS.gene34168 | 0.864161 | 1.48E-64 | -1.69E-46 |
| MS.gene050950 | MS.gene34168 | 0.863184 | 2.98E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene34168 | 0.949582 | 9.51E-108 | -1.69E-46 |
| MS.gene05100 | MS.gene34168 | 0.870968 | 9.77E-67 | -1.69E-46 |
| MS.gene051044 | MS.gene34168 | -0.800263 | 1.56E-48 | -1.69E-46 |
| MS.gene05104 | MS.gene34168 | -0.808424 | 3.12E-50 | -1.69E-46 |
| MS.gene051127 | MS.gene34168 | -0.821884 | 3.18E-53 | -1.69E-46 |
| MS.gene051138 | MS.gene34168 | -0.805584 | 1.24E-49 | -1.69E-46 |
| MS.gene051228 | MS.gene34168 | 0.829838 | 4.11E-55 | -1.69E-46 |
| MS.gene051268 | MS.gene34168 | 0.85249 | 4.46E-61 | -1.69E-46 |
| MS.gene051317 | MS.gene34168 | 0.893162 | 8.12E-75 | -1.69E-46 |
| MS.gene051364 | MS.gene34168 | -0.819602 | 1.07E-52 | -1.69E-46 |
| MS.gene051366 | MS.gene34168 | -0.820706 | 5.95E-53 | -1.69E-46 |
| MS.gene051509 | MS.gene34168 | 0.831083 | 2.04E-55 | -1.69E-46 |
| MS.gene051551 | MS.gene34168 | 0.914645 | 1.50E-84 | -1.69E-46 |
| MS.gene051651 | MS.gene34168 | -0.840919 | 6.51E-58 | -1.69E-46 |
| MS.gene051666 | MS.gene34168 | 0.803471 | 3.43E-49 | -1.69E-46 |
| MS.gene051810 | MS.gene34168 | 0.902256 | 1.17E-78 | -1.69E-46 |
| MS.gene051838 | MS.gene34168 | 0.812257 | 4.64E-51 | -1.69E-46 |
| MS.gene051858 | MS.gene34168 | 0.819428 | 1.17E-52 | -1.69E-46 |
| MS.gene051874 | MS.gene34168 | 0.813253 | 2.81E-51 | -1.69E-46 |
| MS.gene051949 | MS.gene34168 | 0.864226 | 1.42E-64 | -1.69E-46 |
| MS.gene052066 | MS.gene34168 | 0.809263 | 2.06E-50 | -1.69E-46 |
| MS.gene052164 | MS.gene34168 | 0.884749 | 1.47E-71 | -1.69E-46 |
| MS.gene052271 | MS.gene34168 | 0.856925 | 2.31E-62 | -1.69E-46 |
| MS.gene052379 | MS.gene34168 | 0.803067 | 4.16E-49 | -1.69E-46 |
| MS.gene052482 | MS.gene34168 | 0.881589 | 2.12E-70 | -1.69E-46 |
| MS.gene052486 | MS.gene34168 | 0.889913 | 1.58E-73 | -1.69E-46 |
| MS.gene052503 | MS.gene34168 | 0.870894 | 1.03E-66 | -1.69E-46 |
| MS.gene052504 | MS.gene34168 | 0.857456 | 1.61E-62 | -1.69E-46 |
| MS.gene052506 | MS.gene34168 | 0.878546 | 2.57E-69 | -1.69E-46 |
| MS.gene052615 | MS.gene34168 | 0.861187 | 1.22E-63 | -1.69E-46 |
| MS.gene052820 | MS.gene34168 | 0.804579 | 2.02E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene34168 | 0.896609 | 3.13E-76 | -1.69E-46 |
| MS.gene052823 | MS.gene34168 | 0.866105 | 3.64E-65 | -1.69E-46 |
| MS.gene052825 | MS.gene34168 | 0.860536 | 1.93E-63 | -1.69E-46 |
| MS.gene052870 | MS.gene34168 | 0.803 | 4.29E-49 | -1.69E-46 |
| MS.gene052872 | MS.gene34168 | 0.825594 | 4.31E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene34168 | 0.886074 | 4.69E-72 | -1.69E-46 |
| MS.gene052966 | MS.gene34168 | 0.886249 | 4.03E-72 | -1.69E-46 |
| MS.gene053117 | MS.gene34168 | 0.804113 | 2.53E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene34168 | 0.894227 | 3.01E-75 | -1.69E-46 |
| MS.gene053207 | MS.gene34168 | 0.851369 | 9.29E-61 | -1.69E-46 |
| MS.gene053213 | MS.gene34168 | 0.92015 | 1.84E-87 | -1.69E-46 |
| MS.gene053284 | MS.gene34168 | 0.801242 | 9.87E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene34168 | 0.923687 | 1.91E-89 | -1.69E-46 |
| MS.gene053420 | MS.gene34168 | -0.824147 | 9.45E-54 | -1.69E-46 |
| MS.gene053436 | MS.gene34168 | 0.873709 | 1.19E-67 | -1.69E-46 |
| MS.gene053479 | MS.gene34168 | 0.854151 | 1.49E-61 | -1.69E-46 |
| MS.gene053480 | MS.gene34168 | 0.857103 | 2.05E-62 | -1.69E-46 |
| MS.gene053549 | MS.gene34168 | -0.80226 | 6.10E-49 | -1.69E-46 |
| MS.gene053561 | MS.gene34168 | -0.823385 | 1.42E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene34168 | 0.896713 | 2.83E-76 | -1.69E-46 |
| MS.gene053626 | MS.gene34168 | 0.84502 | 5.27E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene34168 | 0.874949 | 4.53E-68 | -1.69E-46 |
| MS.gene053633 | MS.gene34168 | 0.843397 | 1.44E-58 | -1.69E-46 |
| MS.gene053824 | MS.gene34168 | 0.873608 | 1.29E-67 | -1.69E-46 |
| MS.gene053916 | MS.gene34168 | 0.877856 | 4.49E-69 | -1.69E-46 |
| MS.gene054003 | MS.gene34168 | 0.813499 | 2.48E-51 | -1.69E-46 |
| MS.gene054408 | MS.gene34168 | 0.851352 | 9.38E-61 | -1.69E-46 |
| MS.gene054595 | MS.gene34168 | 0.878496 | 2.68E-69 | -1.69E-46 |
| MS.gene054600 | MS.gene34168 | 0.900424 | 7.43E-78 | -1.69E-46 |
| MS.gene054642 | MS.gene34168 | 0.935249 | 1.14E-96 | -1.69E-46 |
| MS.gene054706 | MS.gene34168 | -0.816541 | 5.24E-52 | -1.69E-46 |
| MS.gene05470 | MS.gene34168 | 0.888611 | 5.06E-73 | -1.69E-46 |
| MS.gene054954 | MS.gene34168 | 0.962096 | 1.80E-120 | -1.69E-46 |
| MS.gene05505 | MS.gene34168 | 0.818501 | 1.90E-52 | -1.69E-46 |
| MS.gene055154 | MS.gene34168 | -0.837188 | 6.02E-57 | -1.69E-46 |
| MS.gene055206 | MS.gene34168 | 0.834174 | 3.49E-56 | -1.69E-46 |
| MS.gene055212 | MS.gene34168 | 0.844584 | 6.91E-59 | -1.69E-46 |
| MS.gene055224 | MS.gene34168 | 0.849143 | 3.91E-60 | -1.69E-46 |
| MS.gene055251 | MS.gene34168 | -0.814879 | 1.23E-51 | -1.69E-46 |
| MS.gene055289 | MS.gene34168 | 0.807873 | 4.09E-50 | -1.69E-46 |
| MS.gene055362 | MS.gene34168 | 0.957097 | 6.16E-115 | -1.69E-46 |
| MS.gene055502 | MS.gene34168 | 0.926565 | 3.94E-91 | -1.69E-46 |
| MS.gene055577 | MS.gene34168 | 0.894188 | 3.12E-75 | -1.69E-46 |
| MS.gene055634 | MS.gene34168 | 0.851915 | 6.50E-61 | -1.69E-46 |
| MS.gene055636 | MS.gene34168 | 0.821343 | 4.25E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene34168 | 0.844079 | 9.44E-59 | -1.69E-46 |
| MS.gene055647 | MS.gene34168 | 0.817166 | 3.80E-52 | -1.69E-46 |
| MS.gene055722 | MS.gene34168 | 0.880775 | 4.16E-70 | -1.69E-46 |
| MS.gene055748 | MS.gene34168 | 0.905829 | 2.84E-80 | -1.69E-46 |
| MS.gene055750 | MS.gene34168 | 0.909076 | 8.49E-82 | -1.69E-46 |
| MS.gene055751 | MS.gene34168 | 0.917695 | 3.88E-86 | -1.69E-46 |
| MS.gene055776 | MS.gene34168 | 0.944691 | 1.22E-103 | -1.69E-46 |
| MS.gene055849 | MS.gene34168 | 0.876271 | 1.59E-68 | -1.69E-46 |
| MS.gene05589 | MS.gene34168 | 0.903777 | 2.44E-79 | -1.69E-46 |
| MS.gene05592 | MS.gene34168 | 0.831482 | 1.63E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene34168 | 0.854199 | 1.44E-61 | -1.69E-46 |
| MS.gene055942 | MS.gene34168 | -0.856132 | 3.96E-62 | -1.69E-46 |
| MS.gene055956 | MS.gene34168 | -0.82899 | 6.61E-55 | -1.69E-46 |
| MS.gene056046 | MS.gene34168 | 0.867891 | 9.79E-66 | -1.69E-46 |
| MS.gene056083 | MS.gene34168 | 0.825051 | 5.79E-54 | -1.69E-46 |
| MS.gene056374 | MS.gene34168 | 0.889929 | 1.56E-73 | -1.69E-46 |
| MS.gene056387 | MS.gene34168 | 0.808578 | 2.89E-50 | -1.69E-46 |
| MS.gene056409 | MS.gene34168 | 0.813411 | 2.59E-51 | -1.69E-46 |
| MS.gene056446 | MS.gene34168 | 0.840083 | 1.08E-57 | -1.69E-46 |
| MS.gene056450 | MS.gene34168 | 0.812535 | 4.04E-51 | -1.69E-46 |
| MS.gene056487 | MS.gene34168 | 0.81348 | 2.51E-51 | -1.69E-46 |
| MS.gene056504 | MS.gene34168 | 0.947352 | 7.95E-106 | -1.69E-46 |
| MS.gene056510 | MS.gene34168 | 0.946618 | 3.27E-105 | -1.69E-46 |
| MS.gene056549 | MS.gene34168 | 0.818757 | 1.66E-52 | -1.69E-46 |
| MS.gene056550 | MS.gene34168 | -0.800408 | 1.46E-48 | -1.69E-46 |
| MS.gene056610 | MS.gene34168 | 0.82039 | 7.03E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene34168 | 0.955604 | 2.07E-113 | -1.69E-46 |
| MS.gene056692 | MS.gene34168 | 0.874483 | 6.52E-68 | -1.69E-46 |
| MS.gene056761 | MS.gene34168 | -0.819129 | 1.37E-52 | -1.69E-46 |
| MS.gene056878 | MS.gene34168 | 0.844413 | 7.68E-59 | -1.69E-46 |
| MS.gene056898 | MS.gene34168 | 0.854335 | 1.32E-61 | -1.69E-46 |
| MS.gene057014 | MS.gene34168 | -0.816327 | 5.86E-52 | -1.69E-46 |
| MS.gene057076 | MS.gene34168 | 0.852699 | 3.89E-61 | -1.69E-46 |
| MS.gene057086 | MS.gene34168 | 0.826953 | 2.04E-54 | -1.69E-46 |
| MS.gene057129 | MS.gene34168 | 0.823228 | 1.55E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene34168 | 0.865103 | 7.53E-65 | -1.69E-46 |
| MS.gene057416 | MS.gene34168 | 0.874814 | 5.03E-68 | -1.69E-46 |
| MS.gene05753 | MS.gene34168 | 0.837848 | 4.08E-57 | -1.69E-46 |
| MS.gene057658 | MS.gene34168 | 0.827479 | 1.53E-54 | -1.69E-46 |
| MS.gene057687 | MS.gene34168 | 0.801459 | 8.91E-49 | -1.69E-46 |
| MS.gene057734 | MS.gene34168 | 0.807813 | 4.21E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene34168 | 0.871551 | 6.27E-67 | -1.69E-46 |
| MS.gene057857 | MS.gene34168 | 0.809463 | 1.87E-50 | -1.69E-46 |
| MS.gene057872 | MS.gene34168 | 0.816936 | 4.28E-52 | -1.69E-46 |
| MS.gene05787 | MS.gene34168 | 0.836721 | 7.93E-57 | -1.69E-46 |
| MS.gene057926 | MS.gene34168 | 0.813427 | 2.57E-51 | -1.69E-46 |
| MS.gene058019 | MS.gene34168 | 0.814851 | 1.25E-51 | -1.69E-46 |
| MS.gene058130 | MS.gene34168 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene058268 | MS.gene34168 | -0.803759 | 2.99E-49 | -1.69E-46 |
| MS.gene058269 | MS.gene34168 | -0.800592 | 1.34E-48 | -1.69E-46 |
| MS.gene058323 | MS.gene34168 | 0.800488 | 1.41E-48 | -1.69E-46 |
| MS.gene058334 | MS.gene34168 | -0.861619 | 9.03E-64 | -1.69E-46 |
| MS.gene058335 | MS.gene34168 | 0.815399 | 9.43E-52 | -1.69E-46 |
| MS.gene058338 | MS.gene34168 | 0.844847 | 5.87E-59 | -1.69E-46 |
| MS.gene05837 | MS.gene34168 | 0.866938 | 1.98E-65 | -1.69E-46 |
| MS.gene058419 | MS.gene34168 | 0.946124 | 8.38E-105 | -1.69E-46 |
| MS.gene058544 | MS.gene34168 | 0.895848 | 6.49E-76 | -1.69E-46 |
| MS.gene058719 | MS.gene34168 | 0.845369 | 4.24E-59 | -1.69E-46 |
| MS.gene058723 | MS.gene34168 | 0.879356 | 1.33E-69 | -1.69E-46 |
| MS.gene058773 | MS.gene34168 | 0.921133 | 5.29E-88 | -1.69E-46 |
| MS.gene058838 | MS.gene34168 | 0.871368 | 7.21E-67 | -1.69E-46 |
| MS.gene058978 | MS.gene34168 | -0.80315 | 4.00E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene34168 | 0.953904 | 9.77E-112 | -1.69E-46 |
| MS.gene059023 | MS.gene34168 | 0.897524 | 1.29E-76 | -1.69E-46 |
| MS.gene059029 | MS.gene34168 | 0.834672 | 2.62E-56 | -1.69E-46 |
| MS.gene059079 | MS.gene34168 | 0.807427 | 5.08E-50 | -1.69E-46 |
| MS.gene05912 | MS.gene34168 | 0.806704 | 7.23E-50 | -1.69E-46 |
| MS.gene05913 | MS.gene34168 | 0.874144 | 8.49E-68 | -1.69E-46 |
| MS.gene059305 | MS.gene34168 | 0.803481 | 3.42E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene34168 | 0.810354 | 1.20E-50 | -1.69E-46 |
| MS.gene059367 | MS.gene34168 | 0.847016 | 1.51E-59 | -1.69E-46 |
| MS.gene059667 | MS.gene34168 | 0.840626 | 7.76E-58 | -1.69E-46 |
| MS.gene059677 | MS.gene34168 | 0.945366 | 3.49E-104 | -1.69E-46 |
| MS.gene059699 | MS.gene34168 | -0.813682 | 2.26E-51 | -1.69E-46 |
| MS.gene059701 | MS.gene34168 | -0.811846 | 5.71E-51 | -1.69E-46 |
| MS.gene059703 | MS.gene34168 | -0.823957 | 1.05E-53 | -1.69E-46 |
| MS.gene059718 | MS.gene34168 | 0.91578 | 3.92E-85 | -1.69E-46 |
| MS.gene059756 | MS.gene34168 | 0.881873 | 1.67E-70 | -1.69E-46 |
| MS.gene059801 | MS.gene34168 | 0.845099 | 5.02E-59 | -1.69E-46 |
| MS.gene059837 | MS.gene34168 | 0.877456 | 6.19E-69 | -1.69E-46 |
| MS.gene059865 | MS.gene34168 | 0.945055 | 6.24E-104 | -1.69E-46 |
| MS.gene059902 | MS.gene34168 | 0.811767 | 5.94E-51 | -1.69E-46 |
| MS.gene06000 | MS.gene34168 | 0.871977 | 4.53E-67 | -1.69E-46 |
| MS.gene060295 | MS.gene34168 | 0.805349 | 1.39E-49 | -1.69E-46 |
| MS.gene060337 | MS.gene34168 | -0.836668 | 8.18E-57 | -1.69E-46 |
| MS.gene060341 | MS.gene34168 | 0.820483 | 6.70E-53 | -1.69E-46 |
| MS.gene060482 | MS.gene34168 | 0.859789 | 3.24E-63 | -1.69E-46 |
| MS.gene060526 | MS.gene34168 | 0.81418 | 1.76E-51 | -1.69E-46 |
| MS.gene060595 | MS.gene34168 | -0.826819 | 2.20E-54 | -1.69E-46 |
| MS.gene060703 | MS.gene34168 | 0.918712 | 1.11E-86 | -1.69E-46 |
| MS.gene060728 | MS.gene34168 | 0.824991 | 5.98E-54 | -1.69E-46 |
| MS.gene060762 | MS.gene34168 | 0.906534 | 1.34E-80 | -1.69E-46 |
| MS.gene060778 | MS.gene34168 | 0.891333 | 4.37E-74 | -1.69E-46 |
| MS.gene06077 | MS.gene34168 | 0.928418 | 2.97E-92 | -1.69E-46 |
| MS.gene060823 | MS.gene34168 | -0.815764 | 7.82E-52 | -1.69E-46 |
| MS.gene060835 | MS.gene34168 | 0.832516 | 9.04E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene34168 | 0.851208 | 1.03E-60 | -1.69E-46 |
| MS.gene06097 | MS.gene34168 | 0.83147 | 1.64E-55 | -1.69E-46 |
| MS.gene060982 | MS.gene34168 | 0.937497 | 3.15E-98 | -1.69E-46 |
| MS.gene061044 | MS.gene34168 | -0.819974 | 8.76E-53 | -1.69E-46 |
| MS.gene061134 | MS.gene34168 | 0.829561 | 4.80E-55 | -1.69E-46 |
| MS.gene061150 | MS.gene34168 | 0.887356 | 1.53E-72 | -1.69E-46 |
| MS.gene061171 | MS.gene34168 | 0.807937 | 3.96E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene34168 | 0.809659 | 1.70E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34168.t1 | MTR_6g006990 | 98.462 | 260 | 3 | 1 | 1 | 259 | 72 | 331 | 0.0 | 528 |
| MS.gene34168.t1 | MTR_6g006990 | 98.462 | 260 | 3 | 1 | 1 | 259 | 1 | 260 | 0.0 | 521 |
| MS.gene34168.t1 | MTR_6g006990 | 98.058 | 206 | 3 | 1 | 1 | 205 | 72 | 277 | 7.27e-150 | 420 |
| MS.gene34168.t1 | MTR_5g034250 | 63.566 | 258 | 90 | 1 | 2 | 259 | 3 | 256 | 2.49e-122 | 349 |
| MS.gene34168.t1 | MTR_5g034250 | 63.566 | 258 | 90 | 1 | 2 | 259 | 25 | 278 | 3.07e-122 | 350 |
| MS.gene34168.t1 | MTR_8g064630 | 64.981 | 257 | 85 | 3 | 2 | 258 | 3 | 254 | 7.53e-120 | 343 |
| MS.gene34168.t1 | MTR_3g077910 | 56.667 | 240 | 101 | 1 | 8 | 247 | 41 | 277 | 8.50e-96 | 283 |
| MS.gene34168.t1 | MTR_3g077940 | 53.571 | 252 | 114 | 1 | 8 | 259 | 9 | 257 | 5.02e-95 | 280 |
| MS.gene34168.t1 | MTR_8g064630 | 70.690 | 174 | 50 | 1 | 85 | 258 | 7 | 179 | 1.65e-90 | 266 |
| MS.gene34168.t1 | MTR_3g077940 | 60.989 | 182 | 70 | 1 | 67 | 247 | 25 | 206 | 5.15e-78 | 235 |
| MS.gene34168.t1 | MTR_2g009500 | 51.777 | 197 | 92 | 2 | 55 | 251 | 89 | 282 | 4.38e-68 | 213 |
| MS.gene34168.t1 | MTR_5g066060 | 46.701 | 197 | 103 | 2 | 55 | 251 | 94 | 288 | 1.03e-58 | 189 |
| MS.gene34168.t1 | MTR_3g077930 | 48.370 | 184 | 72 | 3 | 64 | 247 | 19 | 179 | 2.75e-48 | 159 |
| MS.gene34168.t1 | MTR_5g066060 | 45.455 | 154 | 82 | 2 | 55 | 208 | 94 | 245 | 2.96e-39 | 137 |
| MS.gene34168.t1 | MTR_5g066060 | 48.864 | 88 | 44 | 1 | 55 | 142 | 94 | 180 | 5.36e-22 | 90.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene34168.t1 | AT3G01500 | 75.373 | 268 | 65 | 1 | 3 | 270 | 4 | 270 | 1.82e-147 | 414 |
| MS.gene34168.t1 | AT3G01500 | 75.373 | 268 | 65 | 1 | 3 | 270 | 81 | 347 | 2.88e-146 | 414 |
| MS.gene34168.t1 | AT3G01500 | 74.708 | 257 | 64 | 1 | 3 | 259 | 4 | 259 | 1.16e-138 | 391 |
| MS.gene34168.t1 | AT3G01500 | 74.708 | 257 | 64 | 1 | 3 | 259 | 81 | 336 | 1.48e-137 | 391 |
| MS.gene34168.t1 | AT5G14740 | 69.767 | 258 | 77 | 1 | 2 | 259 | 3 | 259 | 1.40e-131 | 373 |
| MS.gene34168.t1 | AT5G14740 | 69.767 | 258 | 77 | 1 | 2 | 259 | 3 | 259 | 1.40e-131 | 373 |
| MS.gene34168.t1 | AT5G14740 | 69.767 | 258 | 77 | 1 | 2 | 259 | 3 | 259 | 1.40e-131 | 373 |
| MS.gene34168.t1 | AT5G14740 | 69.767 | 258 | 77 | 1 | 2 | 259 | 3 | 259 | 1.40e-131 | 373 |
| MS.gene34168.t1 | AT5G14740 | 69.767 | 258 | 77 | 1 | 2 | 259 | 3 | 259 | 1.40e-131 | 373 |
| MS.gene34168.t1 | AT5G14740 | 69.767 | 258 | 77 | 1 | 2 | 259 | 75 | 331 | 1.34e-130 | 373 |
| MS.gene34168.t1 | AT5G14740 | 69.380 | 258 | 77 | 2 | 2 | 259 | 75 | 330 | 5.73e-128 | 367 |
| MS.gene34168.t1 | AT5G14740 | 68.605 | 258 | 79 | 2 | 2 | 259 | 75 | 330 | 6.70e-127 | 363 |
| MS.gene34168.t1 | AT1G70410 | 58.366 | 257 | 102 | 2 | 3 | 258 | 4 | 256 | 2.84e-109 | 316 |
| MS.gene34168.t1 | AT1G70410 | 58.366 | 257 | 102 | 2 | 3 | 258 | 4 | 256 | 2.84e-109 | 316 |
| MS.gene34168.t1 | AT1G70410 | 58.366 | 257 | 102 | 2 | 3 | 258 | 26 | 278 | 1.47e-108 | 315 |
| MS.gene34168.t1 | AT1G23730 | 53.488 | 258 | 115 | 2 | 3 | 259 | 4 | 257 | 1.66e-100 | 294 |
| MS.gene34168.t1 | AT1G23730 | 53.488 | 258 | 115 | 2 | 3 | 259 | 4 | 257 | 1.66e-100 | 294 |
| MS.gene34168.t1 | AT5G14740 | 67.647 | 204 | 65 | 1 | 2 | 205 | 75 | 277 | 3.68e-97 | 288 |
| MS.gene34168.t1 | AT4G33580 | 44.118 | 238 | 130 | 3 | 17 | 254 | 48 | 282 | 1.96e-62 | 199 |
| MS.gene34168.t1 | AT4G33580 | 44.118 | 238 | 130 | 3 | 17 | 254 | 48 | 282 | 1.96e-62 | 199 |
| MS.gene34168.t1 | AT4G33580 | 43.933 | 239 | 130 | 4 | 17 | 254 | 48 | 283 | 1.52e-61 | 196 |
| MS.gene34168.t1 | AT1G58180 | 42.132 | 197 | 113 | 1 | 53 | 249 | 26 | 221 | 9.01e-52 | 169 |
| MS.gene34168.t1 | AT1G58180 | 42.132 | 197 | 113 | 1 | 53 | 249 | 26 | 221 | 9.01e-52 | 169 |
| MS.gene34168.t1 | AT1G58180 | 42.132 | 197 | 113 | 1 | 53 | 249 | 26 | 221 | 9.01e-52 | 169 |
| MS.gene34168.t1 | AT1G58180 | 42.132 | 197 | 113 | 1 | 53 | 249 | 77 | 272 | 2.57e-51 | 170 |
| MS.gene34168.t1 | AT1G58180 | 42.132 | 197 | 113 | 1 | 53 | 249 | 77 | 272 | 2.57e-51 | 170 |
| MS.gene34168.t1 | AT1G58180 | 41.327 | 196 | 99 | 2 | 53 | 248 | 77 | 256 | 3.21e-47 | 158 |
| MS.gene34168.t1 | AT1G58180 | 45.098 | 153 | 83 | 1 | 53 | 205 | 77 | 228 | 8.16e-40 | 140 |
Find 66 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCTTTGGGGACTTGAATT+TGG | 0.157327 | 6.3:+2609662 | MS.gene34168:CDS |
| GCCTTCACCTTTGCCTTTGC+AGG | 0.194024 | 6.3:-2608962 | None:intergenic |
| CAGTGCTTGTGGTGGTATTA+AGG | 0.198916 | 6.3:+2608437 | MS.gene34168:CDS |
| ATTGAGGAGTGGGTCAAAAT+TGG | 0.295969 | 6.3:+2608935 | MS.gene34168:CDS |
| AACAAAACATTGGCACTAAA+AGG | 0.320612 | 6.3:+2609608 | MS.gene34168:CDS |
| AAACATGGAGATGCACCTTT+TGG | 0.343398 | 6.3:+2608986 | MS.gene34168:CDS |
| AGTGCTTGTGGTGGTATTAA+GGG | 0.402709 | 6.3:+2608438 | MS.gene34168:CDS |
| ACCAATCCCTCTCTCACAAA+TGG | 0.406160 | 6.3:-2609584 | None:intergenic |
| CAGGCAAAATATGCTGGAAC+TGG | 0.423684 | 6.3:+2608243 | MS.gene34168:intron |
| CCCATTTGTGAGAGAGGGAT+TGG | 0.434089 | 6.3:+2609583 | MS.gene34168:CDS |
| TTGGAACAAACCTGGTCATA+TGG | 0.439425 | 6.3:-2607968 | None:intergenic |
| CTCTCTGAAGCTTCAGATGT+TGG | 0.451164 | 6.3:-2607278 | None:intergenic |
| GAAGCTGTGAATGTTTCTCT+TGG | 0.456813 | 6.3:+2609545 | MS.gene34168:CDS |
| GTGTCCAACATTGTGGTCAT+TGG | 0.457818 | 6.3:+2608411 | MS.gene34168:CDS |
| GCTTCAGAGAGGATCAAAAC+TGG | 0.457909 | 6.3:+2607290 | MS.gene34168:CDS |
| CCACAAAAGCTTCACCTGGC+TGG | 0.464147 | 6.3:-2607919 | None:intergenic |
| GTGGAGTAGGCTCCATCAAA+TGG | 0.464977 | 6.3:-2608474 | None:intergenic |
| AAGAGAGAAGAAATGGGAAA+GGG | 0.478534 | 6.3:+2606860 | None:intergenic |
| AGCAAGAATCCAGCTTTGTA+TGG | 0.484367 | 6.3:+2607441 | MS.gene34168:intron |
| CAAAATTGGTTTACCTGCAA+AGG | 0.494116 | 6.3:+2608949 | MS.gene34168:CDS |
| TCACAAATGGGTAGGTAAGA+AGG | 0.496271 | 6.3:-2609571 | None:intergenic |
| ACCTACCCATTTGTGAGAGA+GGG | 0.496970 | 6.3:+2609578 | MS.gene34168:CDS |
| TAGGGAGAAGACTGAATTGA+AGG | 0.501912 | 6.3:+2607187 | MS.gene34168:intron |
| ATTTCTCTTTCTTGAAGTGA+AGG | 0.503283 | 6.3:-2607316 | None:intergenic |
| GCTAGTTCACCATACAAAGC+TGG | 0.504395 | 6.3:-2607450 | None:intergenic |
| CCAATCCCTCTCTCACAAAT+GGG | 0.504979 | 6.3:-2609583 | None:intergenic |
| TTGTAACAGGCAAAATATGC+TGG | 0.509487 | 6.3:+2608237 | MS.gene34168:intron |
| TAAGAGAGAAGAAATGGGAA+AGG | 0.517223 | 6.3:+2606859 | None:intergenic |
| GTGCTTGTGGTGGTATTAAG+GGG | 0.524502 | 6.3:+2608439 | MS.gene34168:CDS |
| CATGTGCTAGATTTCCAGCC+AGG | 0.532787 | 6.3:+2607905 | MS.gene34168:CDS |
| TGGAAATCTAGCACATGAGA+TGG | 0.535400 | 6.3:-2607899 | None:intergenic |
| CTGACCACAAAAGCTTCACC+TGG | 0.540212 | 6.3:-2607923 | None:intergenic |
| GTCATTGGACACAGTGCTTG+TGG | 0.548047 | 6.3:+2608426 | MS.gene34168:CDS |
| ACCTGCAAAGGCAAAGGTGA+AGG | 0.548551 | 6.3:+2608961 | MS.gene34168:CDS |
| TGGTTTACCTGCAAAGGCAA+AGG | 0.549043 | 6.3:+2608955 | MS.gene34168:CDS |
| GTATGCTGTTCTTCATCTCA+AGG | 0.550648 | 6.3:+2608278 | MS.gene34168:CDS |
| TACCTACCCATTTGTGAGAG+AGG | 0.551671 | 6.3:+2609577 | MS.gene34168:CDS |
| CAGTGATTTCATTGAGGAGT+GGG | 0.552604 | 6.3:+2608925 | MS.gene34168:intron |
| CATGGTTCCACCATATGACC+AGG | 0.558972 | 6.3:+2607958 | MS.gene34168:CDS |
| GCAAAGGTGAAGGCAAAACA+TGG | 0.559880 | 6.3:+2608971 | MS.gene34168:CDS |
| ATACGGAGAAAGTTGAAGAA+AGG | 0.569824 | 6.3:-2609685 | None:intergenic |
| GGAACAACAGCATCAGCTGA+TGG | 0.577121 | 6.3:+2607251 | MS.gene34168:CDS |
| GGTCAGAAATGTTGCTAACA+TGG | 0.584570 | 6.3:+2607940 | MS.gene34168:CDS |
| GGAAATCTAGCACATGAGAT+GGG | 0.585270 | 6.3:-2607898 | None:intergenic |
| CCTATAGGTGTCCAACATTG+TGG | 0.589585 | 6.3:+2608404 | MS.gene34168:intron |
| GCAGTGATTTCATTGAGGAG+TGG | 0.590746 | 6.3:+2608924 | MS.gene34168:intron |
| ATGAAGAACAGCATACTCAA+TGG | 0.592490 | 6.3:-2608271 | None:intergenic |
| ATGTGGCCACGGTTCTACAT+TGG | 0.595438 | 6.3:+2609988 | MS.gene34168:CDS |
| TGTGTGCATAGCTCTCCAAA+AGG | 0.602700 | 6.3:-2609001 | None:intergenic |
| GGATACTATGACTTTGTGAA+AGG | 0.603419 | 6.3:+2609632 | MS.gene34168:CDS |
| GAGCAAATTACAGCTCAGCT+AGG | 0.613484 | 6.3:+2607230 | MS.gene34168:CDS |
| GTGTCCAATGACCACAATGT+TGG | 0.616398 | 6.3:-2608415 | None:intergenic |
| GAACAAACCTGGTCATATGG+TGG | 0.621340 | 6.3:-2607965 | None:intergenic |
| TTAGGTAAAAGATGTGGCCA+CGG | 0.621466 | 6.3:+2609977 | MS.gene34168:intron |
| GGGATTGGTGAACAAAACAT+TGG | 0.629368 | 6.3:+2609598 | MS.gene34168:CDS |
| GCTATGCACACACTGTGAGA+AGG | 0.643279 | 6.3:+2609012 | MS.gene34168:CDS |
| AAAACATTGGCACTAAAAGG+AGG | 0.653225 | 6.3:+2609611 | MS.gene34168:CDS |
| ATAGTCATTGCATACCGGGG+GGG | 0.655182 | 6.3:-2607484 | None:intergenic |
| TTGTATGGTGAACTAGCCAA+AGG | 0.656155 | 6.3:+2607456 | MS.gene34168:CDS |
| TCCCTCTCTCACAAATGGGT+AGG | 0.656447 | 6.3:-2609579 | None:intergenic |
| ATTGGACACAGTGCTTGTGG+TGG | 0.669101 | 6.3:+2608429 | MS.gene34168:CDS |
| AATGGGAAAGGGCTATGATG+AGG | 0.670505 | 6.3:+2606871 | None:intergenic |
| TGTGTGCAGTGATTTCATTG+AGG | 0.680762 | 6.3:+2608919 | MS.gene34168:intron |
| CAACATCTGAAGCTTCAGAG+AGG | 0.706629 | 6.3:+2607279 | MS.gene34168:CDS |
| TGTTTGTTAGGTAAAAGATG+TGG | 0.720567 | 6.3:+2609971 | MS.gene34168:intron |
| TAGCTTCCAATGTAGAACCG+TGG | 0.724891 | 6.3:-2609994 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAGATATAAGTAATTATAA+AGG | - | chr6.3:2607373-2607392 | None:intergenic | 10.0% |
| !! | AAAGTAACATTATTATAATT+TGG | - | chr6.3:2609876-2609895 | None:intergenic | 10.0% |
| !! | AGTATAATATTTCAAATATA+GGG | + | chr6.3:2607169-2607188 | MS.gene34168:intron | 10.0% |
| !! | TAGTATAATATTTCAAATAT+AGG | + | chr6.3:2607168-2607187 | MS.gene34168:intron | 10.0% |
| !!! | AATTTTACTATTGAATATTT+TGG | + | chr6.3:2608657-2608676 | MS.gene34168:intron | 10.0% |
| !!! | ATTTTACTATTGAATATTTT+GGG | + | chr6.3:2608658-2608677 | MS.gene34168:intron | 10.0% |
| !!! | TATTAGTCTTAATTTTTTAT+AGG | + | chr6.3:2609392-2609411 | MS.gene34168:intron | 10.0% |
| !! | ATACAAATTATACTCAAAAA+AGG | + | chr6.3:2608183-2608202 | MS.gene34168:intron | 15.0% |
| !! | ATTATTGACCAAATATAAAT+CGG | + | chr6.3:2607581-2607600 | MS.gene34168:intron | 15.0% |
| !! | GTTAAAATCAAAATATTTGT+AGG | - | chr6.3:2607674-2607693 | None:intergenic | 15.0% |
| !! | TGATTCTAATTATTAAATGT+TGG | - | chr6.3:2608608-2608627 | None:intergenic | 15.0% |
| !!! | AACATACATATATTTCATTT+TGG | + | chr6.3:2608110-2608129 | MS.gene34168:intron | 15.0% |
| !! | AAAAGATGCATTTGTATAAT+TGG | - | chr6.3:2607990-2608009 | None:intergenic | 20.0% |
| !! | AAAGAAAACAATGAAAAGTT+AGG | - | chr6.3:2607837-2607856 | None:intergenic | 20.0% |
| !! | AAATAATTATCATCGATGTT+AGG | - | chr6.3:2607042-2607061 | None:intergenic | 20.0% |
| !! | AACAAACAACAAAAATTTAG+TGG | - | chr6.3:2609959-2609978 | None:intergenic | 20.0% |
| !! | AGCTCATAATTAATTAACAA+GGG | - | chr6.3:2609788-2609807 | None:intergenic | 20.0% |
| !! | ATAAAAGTAAATGCTCAAAA+GGG | + | chr6.3:2609339-2609358 | MS.gene34168:intron | 20.0% |
| !! | ATAGGAAGAAAAAAAATTGT+TGG | - | chr6.3:2608389-2608408 | None:intergenic | 20.0% |
| !! | CCAAAATAAATAAATGTAGA+TGG | + | chr6.3:2609813-2609832 | MS.gene34168:intron | 20.0% |
| !! | TAGCTCATAATTAATTAACA+AGG | - | chr6.3:2609789-2609808 | None:intergenic | 20.0% |
| !! | TAGGAAGAAAAAAAATTGTT+GGG | - | chr6.3:2608388-2608407 | None:intergenic | 20.0% |
| !! | TATAAAAGTAAATGCTCAAA+AGG | + | chr6.3:2609338-2609357 | MS.gene34168:intron | 20.0% |
| !! | TATATAATTCTAATAGGAGA+AGG | - | chr6.3:2606939-2606958 | None:intergenic | 20.0% |
| !! | TGATAATATTGACATTTATC+TGG | - | chr6.3:2609283-2609302 | None:intergenic | 20.0% |
| !! | TTAAAATTTGAATTATGTGC+AGG | + | chr6.3:2609523-2609542 | MS.gene34168:intron | 20.0% |
| !! | TTGGTCTAAATAATTAAAAG+TGG | - | chr6.3:2608589-2608608 | None:intergenic | 20.0% |
| !! | TTTATCAGTTGAAATTCAAA+TGG | + | chr6.3:2609150-2609169 | MS.gene34168:intron | 20.0% |
| !!! | ACAATTTTTTTTCTTCCTAT+AGG | + | chr6.3:2608389-2608408 | MS.gene34168:intron | 20.0% |
| !!! | ATATATGCTTAATTTGTAAC+AGG | + | chr6.3:2608224-2608243 | MS.gene34168:intron | 20.0% |
| !!! | CCATCTACATTTATTTATTT+TGG | - | chr6.3:2609816-2609835 | None:intergenic | 20.0% |
| !!! | CTAAATTTTTGTTGTTTGTT+AGG | + | chr6.3:2609959-2609978 | MS.gene34168:intron | 20.0% |
| !!! | TTATAAAAAATAAAGGGTGT+TGG | - | chr6.3:2609323-2609342 | None:intergenic | 20.0% |
| ! | AATAAATAGTCATTGCATAC+CGG | - | chr6.3:2607492-2607511 | None:intergenic | 25.0% |
| ! | ACTTCAGATTGAATATATGT+CGG | - | chr6.3:2608139-2608158 | None:intergenic | 25.0% |
| ! | ATATAAATCGGTCTCTAAAT+CGG | + | chr6.3:2607593-2607612 | MS.gene34168:intron | 25.0% |
| ! | ATATTTGGTCAATAATTTCG+AGG | - | chr6.3:2607577-2607596 | None:intergenic | 25.0% |
| ! | GAAAAAAAAAATGACTTACG+TGG | - | chr6.3:2608496-2608515 | None:intergenic | 25.0% |
| ! | GTGAACTATAAGACAAATAT+TGG | - | chr6.3:2609091-2609110 | None:intergenic | 25.0% |
| ! | TCCAATCAAATAAAATCTCA+TGG | + | chr6.3:2607646-2607665 | MS.gene34168:intron | 25.0% |
| ! | TCTACTTATACTTAGATTGA+TGG | - | chr6.3:2608808-2608827 | None:intergenic | 25.0% |
| ! | TGAAAACCAATATGATGTTA+TGG | + | chr6.3:2607704-2607723 | MS.gene34168:intron | 25.0% |
| !! | AGATTTACCTCAACAATTTT+TGG | - | chr6.3:2606910-2606929 | None:intergenic | 25.0% |
| !! | AGCTTTGTATAAATGATTGA+TGG | - | chr6.3:2609853-2609872 | None:intergenic | 25.0% |
| !! | ATATATGGTTGATGTTCATA+CGG | - | chr6.3:2609705-2609724 | None:intergenic | 25.0% |
| !! | ATATATTCAATCTGAAGTGT+CGG | + | chr6.3:2608141-2608160 | MS.gene34168:intron | 25.0% |
| !! | TGAGAGAAAAGTGTAATTTA+TGG | + | chr6.3:2609920-2609939 | MS.gene34168:intron | 25.0% |
| !! | TGTTTTCTTTTTCCAGTTTA+TGG | + | chr6.3:2607847-2607866 | MS.gene34168:intron | 25.0% |
| !! | TTTAGAGACCGATTTATATT+TGG | - | chr6.3:2607592-2607611 | None:intergenic | 25.0% |
| !!! | ACATATAGTACATTTTAGAG+AGG | - | chr6.3:2609760-2609779 | None:intergenic | 25.0% |
| !!! | ACCATGAGATTTTATTTGAT+TGG | - | chr6.3:2607650-2607669 | None:intergenic | 25.0% |
| !!! | CATCTTTTTTGACTTGTATA+TGG | + | chr6.3:2608002-2608021 | MS.gene34168:intron | 25.0% |
| AACAAAACATTGGCACTAAA+AGG | + | chr6.3:2609608-2609627 | MS.gene34168:CDS | 30.0% | |
| AAGATGTGGTCATTGATATA+TGG | - | chr6.3:2609720-2609739 | None:intergenic | 30.0% | |
| ACTGCACACAACAAAATAAA+GGG | - | chr6.3:2608909-2608928 | None:intergenic | 30.0% | |
| AGAAAAGTTAGTGTAGGTAA+AGG | - | chr6.3:2608518-2608537 | None:intergenic | 30.0% | |
| ATAAATAGTCATTGCATACC+GGG | - | chr6.3:2607491-2607510 | None:intergenic | 30.0% | |
| ATACTGATAAATGTACACTG+CGG | + | chr6.3:2608054-2608073 | MS.gene34168:intron | 30.0% | |
| ATACTTAGGTAATCAAGATG+TGG | - | chr6.3:2609734-2609753 | None:intergenic | 30.0% | |
| ATTTCTCTTTCTTGAAGTGA+AGG | - | chr6.3:2607319-2607338 | None:intergenic | 30.0% | |
| CTCTAACCATAACATCATAT+TGG | - | chr6.3:2607713-2607732 | None:intergenic | 30.0% | |
| GTTCAACCAATTTAATGTCT+AGG | + | chr6.3:2608850-2608869 | MS.gene34168:intron | 30.0% | |
| TAGCGATGATAAACAATGAT+TGG | + | chr6.3:2609470-2609489 | MS.gene34168:intron | 30.0% | |
| TCACTTCCTAGACATTAAAT+TGG | - | chr6.3:2608859-2608878 | None:intergenic | 30.0% | |
| TGACAATTACGAACAATTGA+CGG | - | chr6.3:2607005-2607024 | None:intergenic | 30.0% | |
| TGGATTTCACGAAATTTATG+TGG | + | chr6.3:2609170-2609189 | MS.gene34168:intron | 30.0% | |
| TTAGTGTATGACTGGATTAA+CGG | + | chr6.3:2608694-2608713 | MS.gene34168:intron | 30.0% | |
| TTGTATAATTGGAACAAACC+TGG | - | chr6.3:2607979-2607998 | None:intergenic | 30.0% | |
| ! | CTTTTGTCTTTTCCATTTGA+TGG | + | chr6.3:2608462-2608481 | MS.gene34168:CDS | 30.0% |
| ! | TCTAAAGTCACGTATATGAT+TGG | + | chr6.3:2607061-2607080 | MS.gene34168:intron | 30.0% |
| ! | TGGTTAGAGTGAAATTTGTT+TGG | + | chr6.3:2607724-2607743 | MS.gene34168:intron | 30.0% |
| ! | TGTTTGTTAGGTAAAAGATG+TGG | + | chr6.3:2609971-2609990 | MS.gene34168:intron | 30.0% |
| !! | TTTTAGAGAGGAGAATACTT+AGG | - | chr6.3:2609748-2609767 | None:intergenic | 30.0% |
| AAAAATGACTTACGTGGAGT+AGG | - | chr6.3:2608490-2608509 | None:intergenic | 35.0% | |
| AAAACATTGGCACTAAAAGG+AGG | + | chr6.3:2609611-2609630 | MS.gene34168:CDS | 35.0% | |
| AAGAGCTCCAAAAATTGTTG+AGG | + | chr6.3:2606900-2606919 | MS.gene34168:CDS | 35.0% | |
| ATACGGAGAAAGTTGAAGAA+AGG | - | chr6.3:2609688-2609707 | None:intergenic | 35.0% | |
| ATGAAGAACAGCATACTCAA+TGG | - | chr6.3:2608274-2608293 | None:intergenic | 35.0% | |
| CACTGCACACAACAAAATAA+AGG | - | chr6.3:2608910-2608929 | None:intergenic | 35.0% | |
| CCAGTCATACACTAAATAGA+GGG | - | chr6.3:2608689-2608708 | None:intergenic | 35.0% | |
| GGATACTATGACTTTGTGAA+AGG | + | chr6.3:2609632-2609651 | MS.gene34168:CDS | 35.0% | |
| TAAATAGTCATTGCATACCG+GGG | - | chr6.3:2607490-2607509 | None:intergenic | 35.0% | |
| TCCAGTCATACACTAAATAG+AGG | - | chr6.3:2608690-2608709 | None:intergenic | 35.0% | |
| TTGTAACAGGCAAAATATGC+TGG | + | chr6.3:2608237-2608256 | MS.gene34168:intron | 35.0% | |
| ! | AAAGGATCTTTTGAGCTTTG+GGG | + | chr6.3:2609650-2609669 | MS.gene34168:CDS | 35.0% |
| ! | CAAAATTGGTTTACCTGCAA+AGG | + | chr6.3:2608949-2608968 | MS.gene34168:CDS | 35.0% |
| ! | GAAAGGATCTTTTGAGCTTT+GGG | + | chr6.3:2609649-2609668 | MS.gene34168:CDS | 35.0% |
| ! | TGAAAGGATCTTTTGAGCTT+TGG | + | chr6.3:2609648-2609667 | MS.gene34168:CDS | 35.0% |
| AAATAGTCATTGCATACCGG+GGG | - | chr6.3:2607489-2607508 | None:intergenic | 40.0% | |
| AACGGTGACTTTGACAGAAT+TGG | + | chr6.3:2608712-2608731 | MS.gene34168:intron | 40.0% | |
| ACGGTGACTTTGACAGAATT+GGG | + | chr6.3:2608713-2608732 | MS.gene34168:intron | 40.0% | |
| AGCATGCAAAGACCATAAAC+TGG | - | chr6.3:2607862-2607881 | None:intergenic | 40.0% | |
| AGTGCTTGTGGTGGTATTAA+GGG | + | chr6.3:2608438-2608457 | MS.gene34168:CDS | 40.0% | |
| ATCCTTCCAAGTTCCATAAG+AGG | - | chr6.3:2608548-2608567 | None:intergenic | 40.0% | |
| ATTGAGGAGTGGGTCAAAAT+TGG | + | chr6.3:2608935-2608954 | MS.gene34168:CDS | 40.0% | |
| CAGTGATTTCATTGAGGAGT+GGG | + | chr6.3:2608925-2608944 | MS.gene34168:intron | 40.0% | |
| CCCTCTATTTAGTGTATGAC+TGG | + | chr6.3:2608686-2608705 | MS.gene34168:intron | 40.0% | |
| GAAGCTGTGAATGTTTCTCT+TGG | + | chr6.3:2609545-2609564 | MS.gene34168:CDS | 40.0% | |
| GGAAATCTAGCACATGAGAT+GGG | - | chr6.3:2607901-2607920 | None:intergenic | 40.0% | |
| GGCACTAGAAAAGTTAGTGT+AGG | - | chr6.3:2608524-2608543 | None:intergenic | 40.0% | |
| GGTCAGAAATGTTGCTAACA+TGG | + | chr6.3:2607940-2607959 | MS.gene34168:CDS | 40.0% | |
| GTATGCTGTTCTTCATCTCA+AGG | + | chr6.3:2608278-2608297 | MS.gene34168:CDS | 40.0% | |
| TAGGGAGAAGACTGAATTGA+AGG | + | chr6.3:2607187-2607206 | MS.gene34168:intron | 40.0% | |
| TCACAAATGGGTAGGTAAGA+AGG | - | chr6.3:2609574-2609593 | None:intergenic | 40.0% | |
| TGGAAATCTAGCACATGAGA+TGG | - | chr6.3:2607902-2607921 | None:intergenic | 40.0% | |
| TGTGTGCAGTGATTTCATTG+AGG | + | chr6.3:2608919-2608938 | MS.gene34168:intron | 40.0% | |
| TTAGGTAAAAGATGTGGCCA+CGG | + | chr6.3:2609977-2609996 | MS.gene34168:intron | 40.0% | |
| TTGGAACAAACCTGGTCATA+TGG | - | chr6.3:2607971-2607990 | None:intergenic | 40.0% | |
| TTGTATGGTGAACTAGCCAA+AGG | + | chr6.3:2607456-2607475 | MS.gene34168:CDS | 40.0% | |
| ! | AAACATGGAGATGCACCTTT+TGG | + | chr6.3:2608986-2609005 | MS.gene34168:CDS | 40.0% |
| ! | AGCAAGAATCCAGCTTTGTA+TGG | + | chr6.3:2607441-2607460 | MS.gene34168:intron | 40.0% |
| ! | GGGATTGGTGAACAAAACAT+TGG | + | chr6.3:2609598-2609617 | MS.gene34168:CDS | 40.0% |
| !! | ACTTAGATTGATGGTGACTG+TGG | - | chr6.3:2608799-2608818 | None:intergenic | 40.0% |
| !! | TTTTCTAGTGCCACCTCTTA+TGG | + | chr6.3:2608532-2608551 | MS.gene34168:intron | 40.0% |
| AATAGTCATTGCATACCGGG+GGG | - | chr6.3:2607488-2607507 | None:intergenic | 45.0% | |
| ACAAAGCTGGATTCTTGCTG+TGG | - | chr6.3:2607440-2607459 | None:intergenic | 45.0% | |
| ACCAATCCCTCTCTCACAAA+TGG | - | chr6.3:2609587-2609606 | None:intergenic | 45.0% | |
| ACCTACCCATTTGTGAGAGA+GGG | + | chr6.3:2609578-2609597 | MS.gene34168:CDS | 45.0% | |
| CACCTCTTATGGAACTTGGA+AGG | + | chr6.3:2608543-2608562 | MS.gene34168:intron | 45.0% | |
| CAGGCAAAATATGCTGGAAC+TGG | + | chr6.3:2608243-2608262 | MS.gene34168:intron | 45.0% | |
| CAGTGCTTGTGGTGGTATTA+AGG | + | chr6.3:2608437-2608456 | MS.gene34168:CDS | 45.0% | |
| CCAATCCCTCTCTCACAAAT+GGG | - | chr6.3:2609586-2609605 | None:intergenic | 45.0% | |
| CCACAATGTTGGACACCTAT+AGG | - | chr6.3:2608407-2608426 | None:intergenic | 45.0% | |
| CCTATAGGTGTCCAACATTG+TGG | + | chr6.3:2608404-2608423 | MS.gene34168:intron | 45.0% | |
| CGGTGACTTTGACAGAATTG+GGG | + | chr6.3:2608714-2608733 | MS.gene34168:intron | 45.0% | |
| CTTCCAAGTTCCATAAGAGG+TGG | - | chr6.3:2608545-2608564 | None:intergenic | 45.0% | |
| GAACAAACCTGGTCATATGG+TGG | - | chr6.3:2607968-2607987 | None:intergenic | 45.0% | |
| GAGCAAATTACAGCTCAGCT+AGG | + | chr6.3:2607230-2607249 | MS.gene34168:CDS | 45.0% | |
| GCAAAGGTGAAGGCAAAACA+TGG | + | chr6.3:2608971-2608990 | MS.gene34168:CDS | 45.0% | |
| GCAGTGATTTCATTGAGGAG+TGG | + | chr6.3:2608924-2608943 | MS.gene34168:intron | 45.0% | |
| GCTAGTTCACCATACAAAGC+TGG | - | chr6.3:2607453-2607472 | None:intergenic | 45.0% | |
| GCTTCAGAGAGGATCAAAAC+TGG | + | chr6.3:2607290-2607309 | MS.gene34168:CDS | 45.0% | |
| GTGCTTGTGGTGGTATTAAG+GGG | + | chr6.3:2608439-2608458 | MS.gene34168:CDS | 45.0% | |
| GTGTCCAACATTGTGGTCAT+TGG | + | chr6.3:2608411-2608430 | MS.gene34168:CDS | 45.0% | |
| GTGTCCAATGACCACAATGT+TGG | - | chr6.3:2608418-2608437 | None:intergenic | 45.0% | |
| TACCTACCCATTTGTGAGAG+AGG | + | chr6.3:2609577-2609596 | MS.gene34168:CDS | 45.0% | |
| TAGCTTCCAATGTAGAACCG+TGG | - | chr6.3:2609997-2610016 | None:intergenic | 45.0% | |
| TATCGTGTCCGTGTTTGAGT+CGG | - | chr6.3:2608037-2608056 | None:intergenic | 45.0% | |
| TCCACAAGCAACATGCTTGA+TGG | + | chr6.3:2609058-2609077 | MS.gene34168:intron | 45.0% | |
| TGGTGACTGTGGAAGAATTG+CGG | - | chr6.3:2608788-2608807 | None:intergenic | 45.0% | |
| TGGTTTACCTGCAAAGGCAA+AGG | + | chr6.3:2608955-2608974 | MS.gene34168:CDS | 45.0% | |
| TGTGTGCATAGCTCTCCAAA+AGG | - | chr6.3:2609004-2609023 | None:intergenic | 45.0% | |
| ! | CAACATCTGAAGCTTCAGAG+AGG | + | chr6.3:2607279-2607298 | MS.gene34168:CDS | 45.0% |
| ! | CAAGCATGTTGCTTGTGGAT+TGG | - | chr6.3:2609057-2609076 | None:intergenic | 45.0% |
| ! | TCCATCAAGCATGTTGCTTG+TGG | - | chr6.3:2609062-2609081 | None:intergenic | 45.0% |
| !! | CTCTCTGAAGCTTCAGATGT+TGG | - | chr6.3:2607281-2607300 | None:intergenic | 45.0% |
| !! | GAGCTTTGGGGACTTGAATT+TGG | + | chr6.3:2609662-2609681 | MS.gene34168:CDS | 45.0% |
| !!! | CTCAACTTTTTCAGCTGCTG+TGG | - | chr6.3:2607213-2607232 | None:intergenic | 45.0% |
| !!! | ATTTTTTATATAATTCTAAT+AGG | - | chr6.3:2606945-2606964 | None:intergenic | 5.0% |
| !!! | TTACTTTTATAAAAAATAAA+GGG | - | chr6.3:2609329-2609348 | None:intergenic | 5.0% |
| !!! | TTTACTTTTATAAAAAATAA+AGG | - | chr6.3:2609330-2609349 | None:intergenic | 5.0% |
| ACCTGCAAAGGCAAAGGTGA+AGG | + | chr6.3:2608961-2608980 | MS.gene34168:CDS | 50.0% | |
| ATAGTCATTGCATACCGGGG+GGG | - | chr6.3:2607487-2607506 | None:intergenic | 50.0% | |
| ATGTGGCCACGGTTCTACAT+TGG | + | chr6.3:2609988-2610007 | MS.gene34168:CDS | 50.0% | |
| ATTGGACACAGTGCTTGTGG+TGG | + | chr6.3:2608429-2608448 | MS.gene34168:CDS | 50.0% | |
| CATGGTTCCACCATATGACC+AGG | + | chr6.3:2607958-2607977 | MS.gene34168:CDS | 50.0% | |
| CATGTGCTAGATTTCCAGCC+AGG | + | chr6.3:2607905-2607924 | MS.gene34168:CDS | 50.0% | |
| CCCATTTGTGAGAGAGGGAT+TGG | + | chr6.3:2609583-2609602 | MS.gene34168:CDS | 50.0% | |
| CTGACCACAAAAGCTTCACC+TGG | - | chr6.3:2607926-2607945 | None:intergenic | 50.0% | |
| GCTATGCACACACTGTGAGA+AGG | + | chr6.3:2609012-2609031 | MS.gene34168:CDS | 50.0% | |
| GGAACAACAGCATCAGCTGA+TGG | + | chr6.3:2607251-2607270 | MS.gene34168:CDS | 50.0% | |
| GTCATTGGACACAGTGCTTG+TGG | + | chr6.3:2608426-2608445 | MS.gene34168:CDS | 50.0% | |
| GTGCCACCTCTTATGGAACT+TGG | + | chr6.3:2608539-2608558 | MS.gene34168:intron | 50.0% | |
| GTGGAGTAGGCTCCATCAAA+TGG | - | chr6.3:2608477-2608496 | None:intergenic | 50.0% | |
| TCCCTCTCTCACAAATGGGT+AGG | - | chr6.3:2609582-2609601 | None:intergenic | 50.0% | |
| !! | TGTCTCCACCGACTCAAACA+CGG | + | chr6.3:2608026-2608045 | MS.gene34168:intron | 50.0% |
| CCACAAAAGCTTCACCTGGC+TGG | - | chr6.3:2607922-2607941 | None:intergenic | 55.0% | |
| GCCTTCACCTTTGCCTTTGC+AGG | - | chr6.3:2608965-2608984 | None:intergenic | 55.0% | |
| ! | CCAGCCAGGTGAAGCTTTTG+TGG | + | chr6.3:2607919-2607938 | MS.gene34168:CDS | 55.0% |
| CGTGTCCGTGTTTGAGTCGG+TGG | - | chr6.3:2608034-2608053 | None:intergenic | 60.0% | |
| CATTGCATACCGGGGGGGCT+TGG | - | chr6.3:2607482-2607501 | None:intergenic | 65.0% | |
| AGCCAAAGGCCAAGCCCCCC+CGG | + | chr6.3:2607470-2607489 | MS.gene34168:CDS | 70.0% | |
| ! | TACCGGGGGGGCTTGGCCTT+TGG | - | chr6.3:2607475-2607494 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 2606872 | 2610019 | 2606872 | ID=MS.gene34168 |
| chr6.3 | mRNA | 2606872 | 2610019 | 2606872 | ID=MS.gene34168.t1;Parent=MS.gene34168 |
| chr6.3 | exon | 2606872 | 2606921 | 2606872 | ID=MS.gene34168.t1.exon1;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2606872 | 2606921 | 2606872 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2607190 | 2607342 | 2607190 | ID=MS.gene34168.t1.exon2;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2607190 | 2607342 | 2607190 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2607443 | 2607491 | 2607443 | ID=MS.gene34168.t1.exon3;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2607443 | 2607491 | 2607443 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2607863 | 2607979 | 2607863 | ID=MS.gene34168.t1.exon4;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2607863 | 2607979 | 2607863 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2608246 | 2608299 | 2608246 | ID=MS.gene34168.t1.exon5;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2608246 | 2608299 | 2608246 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2608411 | 2608496 | 2608411 | ID=MS.gene34168.t1.exon6;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2608411 | 2608496 | 2608411 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2608928 | 2609033 | 2608928 | ID=MS.gene34168.t1.exon7;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2608928 | 2609033 | 2608928 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2609545 | 2609703 | 2609545 | ID=MS.gene34168.t1.exon8;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2609545 | 2609703 | 2609545 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| chr6.3 | exon | 2609981 | 2610019 | 2609981 | ID=MS.gene34168.t1.exon9;Parent=MS.gene34168.t1 |
| chr6.3 | CDS | 2609981 | 2610019 | 2609981 | ID=cds.MS.gene34168.t1;Parent=MS.gene34168.t1 |
| Gene Sequence |
| Protein sequence |
