Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0265310 | XP_024631663.1 | 94.417 | 412 | 15 | 2 | 1 | 410 | 1 | 406 | 0.0 | 684 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0265310 | sp|Q9CAI2|IQD8_ARATH | 46.698 | 424 | 165 | 18 | 1 | 392 | 1 | 395 | 4.59e-87 | 273 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0265310 | A0A396JDB1 | 94.417 | 412 | 15 | 2 | 1 | 410 | 1 | 406 | 0.0 | 684 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0016530 | Msa0265310 | 0.819815 | 9.527767e-53 | -8.615850e-47 |
Msa0018920 | Msa0265310 | 0.846607 | 1.953728e-59 | -8.615850e-47 |
Msa0020540 | Msa0265310 | 0.825981 | 3.483989e-54 | -8.615850e-47 |
Msa0027800 | Msa0265310 | 0.830829 | 2.356348e-55 | -8.615850e-47 |
Msa0030070 | Msa0265310 | 0.840308 | 9.404125e-58 | -8.615850e-47 |
Msa0030690 | Msa0265310 | 0.811321 | 7.421599e-51 | -8.615850e-47 |
Msa0032980 | Msa0265310 | 0.847163 | 1.376200e-59 | -8.615850e-47 |
Msa0040640 | Msa0265310 | 0.844464 | 7.438438e-59 | -8.615850e-47 |
Msa0062340 | Msa0265310 | 0.801093 | 1.059461e-48 | -8.615850e-47 |
Msa0078130 | Msa0265310 | 0.838119 | 3.474183e-57 | -8.615850e-47 |
Msa0080370 | Msa0265310 | 0.814339 | 1.620061e-51 | -8.615850e-47 |
Msa0080440 | Msa0265310 | 0.811167 | 8.015356e-51 | -8.615850e-47 |
Msa0090440 | Msa0265310 | 0.828159 | 1.049715e-54 | -8.615850e-47 |
Msa0091350 | Msa0265310 | 0.866458 | 2.810714e-65 | -8.615850e-47 |
Msa0094180 | Msa0265310 | 0.826186 | 3.114141e-54 | -8.615850e-47 |
Msa0106630 | Msa0265310 | 0.837301 | 5.633605e-57 | -8.615850e-47 |
Msa0109730 | Msa0265310 | 0.804274 | 2.336420e-49 | -8.615850e-47 |
Msa0112670 | Msa0265310 | 0.802849 | 4.614261e-49 | -8.615850e-47 |
Msa0123320 | Msa0265310 | 0.834538 | 2.828496e-56 | -8.615850e-47 |
Msa0125590 | Msa0265310 | 0.864739 | 9.787725e-65 | -8.615850e-47 |
Msa0127340 | Msa0265310 | 0.852185 | 5.447927e-61 | -8.615850e-47 |
Msa0127680 | Msa0265310 | 0.829236 | 5.764141e-55 | -8.615850e-47 |
Msa0140380 | Msa0265310 | 0.825450 | 4.656911e-54 | -8.615850e-47 |
Msa0153210 | Msa0265310 | 0.836115 | 1.130820e-56 | -8.615850e-47 |
Msa0156050 | Msa0265310 | 0.806259 | 8.971607e-50 | -8.615850e-47 |
Msa0156090 | Msa0265310 | 0.813883 | 2.042701e-51 | -8.615850e-47 |
Msa0159590 | Msa0265310 | 0.811637 | 6.338679e-51 | -8.615850e-47 |
Msa0159620 | Msa0265310 | 0.821127 | 4.762854e-53 | -8.615850e-47 |
Msa0165830 | Msa0265310 | 0.861857 | 7.641802e-64 | -8.615850e-47 |
Msa0168050 | Msa0265310 | 0.803839 | 2.877960e-49 | -8.615850e-47 |
Msa0170070 | Msa0265310 | 0.815592 | 8.542465e-52 | -8.615850e-47 |
Msa0184700 | Msa0265310 | 0.844547 | 7.065152e-59 | -8.615850e-47 |
Msa0186180 | Msa0265310 | 0.832916 | 7.193357e-56 | -8.615850e-47 |
Msa0186360 | Msa0265310 | 0.814290 | 1.661258e-51 | -8.615850e-47 |
Msa0204970 | Msa0265310 | 0.822496 | 2.296572e-53 | -8.615850e-47 |
Msa0225800 | Msa0265310 | 0.823116 | 1.647329e-53 | -8.615850e-47 |
Msa0249870 | Msa0265310 | 0.809321 | 2.004429e-50 | -8.615850e-47 |
Msa0260570 | Msa0265310 | 0.810909 | 9.118600e-51 | -8.615850e-47 |
Msa0260630 | Msa0265310 | 0.823932 | 1.061225e-53 | -8.615850e-47 |
Msa0265310 | Msa0281540 | 0.837300 | 5.637357e-57 | -8.615850e-47 |
Msa0265310 | Msa0320580 | 0.836233 | 1.054988e-56 | -8.615850e-47 |
Msa0265310 | Msa0341680 | 0.839122 | 1.914315e-57 | -8.615850e-47 |
Msa0265310 | Msa0344110 | 0.837068 | 6.464516e-57 | -8.615850e-47 |
Msa0265310 | Msa0368860 | 0.805021 | 1.631975e-49 | -8.615850e-47 |
Msa0265310 | Msa0373170 | 0.850090 | 2.125637e-60 | -8.615850e-47 |
Msa0265310 | Msa0382230 | 0.801564 | 8.484768e-49 | -8.615850e-47 |
Msa0265310 | Msa0383000 | 0.821490 | 3.927695e-53 | -8.615850e-47 |
Msa0265310 | Msa0388620 | 0.830928 | 2.227881e-55 | -8.615850e-47 |
Msa0265310 | Msa0412130 | 0.810482 | 1.127593e-50 | -8.615850e-47 |
Msa0265310 | Msa0416160 | 0.816572 | 5.159570e-52 | -8.615850e-47 |
Msa0265310 | Msa0420430 | 0.825911 | 3.621428e-54 | -8.615850e-47 |
Msa0265310 | Msa0420670 | 0.844566 | 6.984950e-59 | -8.615850e-47 |
Msa0265310 | Msa0421130 | 0.815737 | 7.929918e-52 | -8.615850e-47 |
Msa0265310 | Msa0421750 | 0.846569 | 1.999818e-59 | -8.615850e-47 |
Msa0265310 | Msa0433150 | 0.809048 | 2.293555e-50 | -8.615850e-47 |
Msa0265310 | Msa0433760 | 0.852816 | 3.600243e-61 | -8.615850e-47 |
Msa0265310 | Msa0456670 | 0.821032 | 5.008177e-53 | -8.615850e-47 |
Msa0265310 | Msa0462780 | 0.805844 | 1.097130e-49 | -8.615850e-47 |
Msa0265310 | Msa0466520 | 0.839635 | 1.408333e-57 | -8.615850e-47 |
Msa0265310 | Msa0466880 | 0.819353 | 1.214368e-52 | -8.615850e-47 |
Msa0265310 | Msa0467690 | 0.848048 | 7.853782e-60 | -8.615850e-47 |
Msa0265310 | Msa0468620 | 0.820958 | 5.209706e-53 | -8.615850e-47 |
Msa0265310 | Msa0477630 | 0.848219 | 7.045075e-60 | -8.615850e-47 |
Msa0265310 | Msa0478140 | 0.821900 | 3.157220e-53 | -8.615850e-47 |
Msa0265310 | Msa0478200 | 0.818218 | 2.198767e-52 | -8.615850e-47 |
Msa0265310 | Msa0480730 | 0.814301 | 1.652044e-51 | -8.615850e-47 |
Msa0265310 | Msa0506540 | 0.819850 | 9.352998e-53 | -8.615850e-47 |
Msa0265310 | Msa0507810 | 0.818896 | 1.542795e-52 | -8.615850e-47 |
Msa0265310 | Msa0507820 | 0.807819 | 4.194889e-50 | -8.615850e-47 |
Msa0265310 | Msa0507920 | 0.829644 | 4.587625e-55 | -8.615850e-47 |
Msa0265310 | Msa0512530 | 0.840578 | 7.991338e-58 | -8.615850e-47 |
Msa0265310 | Msa0513080 | 0.803586 | 3.247925e-49 | -8.615850e-47 |
Msa0265310 | Msa0513560 | 0.843055 | 1.773048e-58 | -8.615850e-47 |
Msa0265310 | Msa0513640 | 0.808252 | 3.392615e-50 | -8.615850e-47 |
Msa0265310 | Msa0514020 | 0.856630 | 2.824635e-62 | -8.615850e-47 |
Msa0265310 | Msa0514500 | 0.823425 | 1.395088e-53 | -8.615850e-47 |
Msa0265310 | Msa0520680 | 0.812221 | 4.727909e-51 | -8.615850e-47 |
Msa0265310 | Msa0521680 | 0.855213 | 7.333784e-62 | -8.615850e-47 |
Msa0265310 | Msa0527850 | 0.844519 | 7.188632e-59 | -8.615850e-47 |
Msa0265310 | Msa0541740 | 0.836743 | 7.825718e-57 | -8.615850e-47 |
Msa0265310 | Msa0544410 | 0.814962 | 1.179190e-51 | -8.615850e-47 |
Msa0265310 | Msa0550590 | 0.801644 | 8.170593e-49 | -8.615850e-47 |
Msa0265310 | Msa0553750 | 0.806017 | 1.008797e-49 | -8.615850e-47 |
Msa0265310 | Msa0554300 | 0.859157 | 5.022035e-63 | -8.615850e-47 |
Msa0265310 | Msa0559100 | 0.819453 | 1.152063e-52 | -8.615850e-47 |
Msa0265310 | Msa0561560 | 0.819339 | 1.223462e-52 | -8.615850e-47 |
Msa0265310 | Msa0563900 | 0.808602 | 2.857831e-50 | -8.615850e-47 |
Msa0265310 | Msa0564980 | 0.832770 | 7.820058e-56 | -8.615850e-47 |
Msa0265310 | Msa0572830 | 0.827662 | 1.382400e-54 | -8.615850e-47 |
Msa0265310 | Msa0577280 | 0.806778 | 6.974299e-50 | -8.615850e-47 |
Msa0265310 | Msa0577330 | 0.808391 | 3.169753e-50 | -8.615850e-47 |
Msa0265310 | Msa0582460 | 0.842765 | 2.117602e-58 | -8.615850e-47 |
Msa0265310 | Msa0584530 | 0.800752 | 1.243573e-48 | -8.615850e-47 |
Msa0265310 | Msa0586200 | 0.858987 | 5.648776e-63 | -8.615850e-47 |
Msa0265310 | Msa0607800 | 0.830960 | 2.187843e-55 | -8.615850e-47 |
Msa0265310 | Msa0608350 | 0.855770 | 5.046714e-62 | -8.615850e-47 |
Msa0265310 | Msa0613580 | 0.805714 | 1.168308e-49 | -8.615850e-47 |
Msa0265310 | Msa0613630 | 0.820831 | 5.572711e-53 | -8.615850e-47 |
Msa0265310 | Msa0620500 | 0.850216 | 1.959719e-60 | -8.615850e-47 |
Msa0265310 | Msa0622920 | 0.809887 | 1.515378e-50 | -8.615850e-47 |
Msa0265310 | Msa0625620 | 0.819959 | 8.830086e-53 | -8.615850e-47 |
Msa0265310 | Msa0640800 | 0.812789 | 3.553458e-51 | -8.615850e-47 |
Msa0265310 | Msa0647050 | 0.808204 | 3.474181e-50 | -8.615850e-47 |
Msa0265310 | Msa0647440 | 0.869262 | 3.531305e-66 | -8.615850e-47 |
Msa0265310 | Msa0648040 | 0.834708 | 2.563589e-56 | -8.615850e-47 |
Msa0265310 | Msa0648760 | 0.862684 | 4.257301e-64 | -8.615850e-47 |
Msa0265310 | Msa0654740 | 0.812142 | 4.920442e-51 | -8.615850e-47 |
Msa0265310 | Msa0657210 | 0.827816 | 1.269418e-54 | -8.615850e-47 |
Msa0265310 | Msa0663290 | 0.828408 | 9.143277e-55 | -8.615850e-47 |
Msa0265310 | Msa0664070 | 0.830069 | 3.614798e-55 | -8.615850e-47 |
Msa0265310 | Msa0688380 | 0.805282 | 1.439258e-49 | -8.615850e-47 |
Msa0265310 | Msa0688620 | 0.805539 | 1.271283e-49 | -8.615850e-47 |
Msa0265310 | Msa0690320 | 0.858737 | 6.709871e-63 | -8.615850e-47 |
Msa0265310 | Msa0690740 | 0.838420 | 2.906512e-57 | -8.615850e-47 |
Msa0265310 | Msa0691270 | 0.853723 | 1.979509e-61 | -8.615850e-47 |
Msa0265310 | Msa0701250 | 0.836790 | 7.609974e-57 | -8.615850e-47 |
Msa0265310 | Msa0708980 | 0.813627 | 2.326273e-51 | -8.615850e-47 |
Msa0265310 | Msa0713920 | 0.809929 | 1.483841e-50 | -8.615850e-47 |
Msa0265310 | Msa0714520 | 0.832123 | 1.131244e-55 | -8.615850e-47 |
Msa0265310 | Msa0717900 | 0.859955 | 2.889643e-63 | -8.615850e-47 |
Msa0265310 | Msa0720280 | 0.832734 | 7.984120e-56 | -8.615850e-47 |
Msa0265310 | Msa0749190 | 0.802970 | 4.357494e-49 | -8.615850e-47 |
Msa0265310 | Msa0750520 | 0.809809 | 1.574551e-50 | -8.615850e-47 |
Msa0265310 | Msa0803140 | 0.835393 | 1.722318e-56 | -8.615850e-47 |
Msa0265310 | Msa0816080 | 0.865858 | 4.353507e-65 | -8.615850e-47 |
Msa0265310 | Msa0837680 | 0.846608 | 1.952170e-59 | -8.615850e-47 |
Msa0265310 | Msa0841500 | 0.823318 | 1.477218e-53 | -8.615850e-47 |
Msa0265310 | Msa0846900 | 0.805527 | 1.278481e-49 | -8.615850e-47 |
Msa0265310 | Msa0861440 | 0.835489 | 1.629292e-56 | -8.615850e-47 |
Msa0265310 | Msa0879920 | 0.855454 | 6.242801e-62 | -8.615850e-47 |
Msa0265310 | Msa0897790 | 0.867098 | 1.757910e-65 | -8.615850e-47 |
Msa0265310 | Msa0900090 | 0.833681 | 4.636809e-56 | -8.615850e-47 |
Msa0265310 | Msa0924430 | 0.837429 | 5.225970e-57 | -8.615850e-47 |
Msa0265310 | Msa0926310 | 0.819534 | 1.104280e-52 | -8.615850e-47 |
Msa0265310 | Msa0931310 | 0.811709 | 6.114388e-51 | -8.615850e-47 |
Msa0265310 | Msa0963370 | 0.859675 | 3.509278e-63 | -8.615850e-47 |
Msa0265310 | Msa0989370 | 0.807136 | 5.855907e-50 | -8.615850e-47 |
Msa0265310 | Msa1000780 | 0.820324 | 7.284985e-53 | -8.615850e-47 |
Msa0265310 | Msa1008670 | 0.813473 | 2.514551e-51 | -8.615850e-47 |
Msa0265310 | Msa1008680 | 0.807437 | 5.058131e-50 | -8.615850e-47 |
Msa0265310 | Msa1034400 | 0.800828 | 1.200084e-48 | -8.615850e-47 |
Msa0265310 | Msa1041370 | 0.828329 | 9.552218e-55 | -8.615850e-47 |
Msa0265310 | Msa1060900 | 0.813005 | 3.186439e-51 | -8.615850e-47 |
Msa0265310 | Msa1071410 | 0.811529 | 6.688243e-51 | -8.615850e-47 |
Msa0265310 | Msa1074150 | 0.804443 | 2.154542e-49 | -8.615850e-47 |
Msa0265310 | Msa1076020 | 0.804405 | 2.194620e-49 | -8.615850e-47 |
Msa0265310 | Msa1078860 | 0.853188 | 2.818626e-61 | -8.615850e-47 |
Msa0265310 | Msa1078990 | 0.858486 | 7.970366e-63 | -8.615850e-47 |
Msa0265310 | Msa1081270 | 0.815844 | 7.504971e-52 | -8.615850e-47 |
Msa0265310 | Msa1106220 | 0.842234 | 2.929119e-58 | -8.615850e-47 |
Msa0265310 | Msa1148630 | 0.824732 | 6.883489e-54 | -8.615850e-47 |
Msa0265310 | Msa1149450 | 0.828590 | 8.261425e-55 | -8.615850e-47 |
Msa0265310 | Msa1159590 | 0.824890 | 6.316538e-54 | -8.615850e-47 |
Msa0265310 | Msa1163180 | 0.818976 | 1.479739e-52 | -8.615850e-47 |
Msa0265310 | Msa1169170 | 0.849246 | 3.656197e-60 | -8.615850e-47 |
Msa0265310 | Msa1169690 | 0.843371 | 1.459901e-58 | -8.615850e-47 |
Msa0265310 | Msa1180700 | 0.800259 | 1.567270e-48 | -8.615850e-47 |
Msa0265310 | Msa1188790 | 0.809236 | 2.091168e-50 | -8.615850e-47 |
Msa0265310 | Msa1190390 | 0.816769 | 4.662653e-52 | -8.615850e-47 |
Msa0265310 | Msa1191000 | 0.848514 | 5.839507e-60 | -8.615850e-47 |
Msa0265310 | Msa1201780 | 0.817042 | 4.048067e-52 | -8.615850e-47 |
Msa0265310 | Msa1206040 | 0.809954 | 1.465873e-50 | -8.615850e-47 |
Msa0265310 | Msa1213830 | 0.814659 | 1.376516e-51 | -8.615850e-47 |
Msa0265310 | Msa1214350 | 0.800134 | 1.661593e-48 | -8.615850e-47 |
Msa0265310 | Msa1215980 | 0.850482 | 1.650655e-60 | -8.615850e-47 |
Msa0265310 | Msa1218820 | 0.809244 | 2.082096e-50 | -8.615850e-47 |
Msa0265310 | Msa1231780 | 0.800529 | 1.380789e-48 | -8.615850e-47 |
Msa0265310 | Msa1244690 | 0.810249 | 1.266094e-50 | -8.615850e-47 |
Msa0265310 | Msa1252790 | 0.804954 | 1.685374e-49 | -8.615850e-47 |
Msa0265310 | Msa1254420 | 0.853584 | 2.169365e-61 | -8.615850e-47 |
Msa0265310 | Msa1254540 | 0.842536 | 2.435708e-58 | -8.615850e-47 |
Msa0265310 | Msa1261050 | 0.820534 | 6.520490e-53 | -8.615850e-47 |
Msa0265310 | Msa1263740 | 0.815020 | 1.144681e-51 | -8.615850e-47 |
Msa0265310 | Msa1263780 | 0.801329 | 9.480648e-49 | -8.615850e-47 |
Msa0265310 | Msa1267930 | 0.835413 | 1.702522e-56 | -8.615850e-47 |
Msa0265310 | Msa1268540 | 0.822337 | 2.500787e-53 | -8.615850e-47 |
Msa0265310 | Msa1279120 | 0.804290 | 2.319081e-49 | -8.615850e-47 |
Msa0265310 | Msa1293610 | 0.811272 | 7.608458e-51 | -8.615850e-47 |
Msa0265310 | Msa1294280 | 0.814115 | 1.815846e-51 | -8.615850e-47 |
Msa0265310 | Msa1294460 | 0.863428 | 2.506728e-64 | -8.615850e-47 |
Msa0265310 | Msa1294790 | 0.861917 | 7.324618e-64 | -8.615850e-47 |
Msa0265310 | Msa1297070 | 0.800850 | 1.187802e-48 | -8.615850e-47 |
Msa0265310 | Msa1300460 | 0.827134 | 1.850173e-54 | -8.615850e-47 |
Msa0265310 | Msa1301820 | 0.844167 | 8.937388e-59 | -8.615850e-47 |
Msa0265310 | Msa1305780 | 0.822673 | 2.088277e-53 | -8.615850e-47 |
Msa0265310 | Msa1305920 | 0.835013 | 2.148446e-56 | -8.615850e-47 |
Msa0265310 | Msa1328870 | 0.804599 | 1.999298e-49 | -8.615850e-47 |
Msa0265310 | Msa1332950 | 0.839016 | 2.038348e-57 | -8.615850e-47 |
Msa0265310 | Msa1333360 | 0.801903 | 7.227904e-49 | -8.615850e-47 |
Msa0265310 | Msa1339170 | 0.816694 | 4.846409e-52 | -8.615850e-47 |
Msa0265310 | Msa1339230 | 0.808616 | 2.837938e-50 | -8.615850e-47 |
Msa0265310 | Msa1364410 | 0.800099 | 1.689280e-48 | -8.615850e-47 |
Msa0265310 | Msa1365500 | 0.817510 | 3.176033e-52 | -8.615850e-47 |
Msa0265310 | Msa1381470 | 0.850245 | 1.923404e-60 | -8.615850e-47 |
Msa0265310 | Msa1381800 | 0.813548 | 2.421100e-51 | -8.615850e-47 |
Msa0265310 | Msa1387500 | 0.809129 | 2.204433e-50 | -8.615850e-47 |
Msa0265310 | Msa1389820 | 0.814468 | 1.517246e-51 | -8.615850e-47 |
Msa0265310 | Msa1393560 | 0.811296 | 7.517546e-51 | -8.615850e-47 |
Msa0265310 | Msa1399190 | 0.810914 | 9.096098e-51 | -8.615850e-47 |
Msa0265310 | Msa1406720 | 0.824709 | 6.970088e-54 | -8.615850e-47 |
Msa0265310 | Msa1426320 | 0.816644 | 4.973280e-52 | -8.615850e-47 |
Msa0265310 | Msa1432520 | 0.847903 | 8.612595e-60 | -8.615850e-47 |
Msa0265310 | Msa1434640 | 0.846553 | 2.020154e-59 | -8.615850e-47 |
Msa0265310 | Msa1435100 | 0.808124 | 3.612822e-50 | -8.615850e-47 |
Msa0265310 | Msa1439730 | 0.803839 | 2.877818e-49 | -8.615850e-47 |
Msa0265310 | Msa1442260 | 0.823611 | 1.261617e-53 | -8.615850e-47 |
Msa0265310 | Msa1450190 | 0.807125 | 5.887989e-50 | -8.615850e-47 |
Msa0265310 | Msa1457840 | 0.847992 | 8.138668e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0265310 | MtrunA17_Chr2g0330051 | 94.417 | 412 | 15 | 2 | 1 | 410 | 1 | 406 | 0.0 | 684 |
Msa0265310 | MtrunA17_Chr8g0342551 | 53.273 | 443 | 160 | 14 | 1 | 407 | 1 | 432 | 7.08e-108 | 325 |
Msa0265310 | MtrunA17_Chr3g0135851 | 46.154 | 442 | 185 | 13 | 1 | 399 | 1 | 432 | 3.26e-84 | 264 |
Msa0265310 | MtrunA17_Chr4g0025441 | 41.697 | 271 | 134 | 6 | 1 | 257 | 1 | 261 | 6.09e-38 | 142 |
Msa0265310 | MtrunA17_Chr6g0462191 | 35.974 | 303 | 155 | 7 | 80 | 353 | 105 | 397 | 4.32e-29 | 117 |
Msa0265310 | MtrunA17_Chr8g0346021 | 41.451 | 193 | 85 | 7 | 80 | 257 | 125 | 304 | 1.08e-28 | 117 |
Msa0265310 | MtrunA17_Chr1g0200161 | 37.989 | 179 | 99 | 5 | 81 | 256 | 140 | 309 | 3.59e-27 | 112 |
Msa0265310 | MtrunA17_Chr1g0181581 | 39.896 | 193 | 98 | 7 | 59 | 249 | 99 | 275 | 1.06e-26 | 111 |
Msa0265310 | MtrunA17_Chr7g0263731 | 31.287 | 342 | 164 | 10 | 56 | 346 | 88 | 409 | 1.11e-25 | 108 |
Msa0265310 | MtrunA17_Chr1g0204901 | 30.924 | 249 | 105 | 6 | 1 | 182 | 1 | 249 | 9.59e-23 | 99.8 |
Msa0265310 | MtrunA17_Chr4g0020671 | 38.060 | 134 | 74 | 3 | 81 | 208 | 100 | 230 | 2.13e-21 | 95.5 |
Msa0265310 | MtrunA17_Chr2g0316401 | 34.659 | 176 | 99 | 4 | 84 | 256 | 76 | 238 | 2.42e-21 | 94.0 |
Msa0265310 | MtrunA17_Chr2g0283321 | 29.885 | 261 | 152 | 6 | 1 | 261 | 1 | 230 | 3.48e-21 | 93.2 |
Msa0265310 | MtrunA17_Chr4g0060381 | 35.593 | 177 | 90 | 5 | 1 | 156 | 1 | 174 | 6.70e-19 | 89.0 |
Msa0265310 | MtrunA17_Chr1g0166431 | 33.772 | 228 | 100 | 6 | 1 | 180 | 7 | 231 | 1.16e-18 | 87.4 |
Msa0265310 | MtrunA17_Chr3g0126901 | 31.206 | 282 | 144 | 9 | 82 | 346 | 112 | 360 | 2.54e-18 | 86.7 |
Msa0265310 | MtrunA17_Chr8g0340761 | 55.072 | 69 | 31 | 0 | 80 | 148 | 124 | 192 | 4.16e-18 | 85.9 |
Msa0265310 | MtrunA17_Chr1g0146931 | 39.583 | 192 | 97 | 5 | 80 | 252 | 120 | 311 | 4.93e-18 | 85.9 |
Msa0265310 | MtrunA17_Chr4g0057321 | 37.333 | 150 | 84 | 3 | 1 | 142 | 1 | 148 | 6.99e-18 | 85.1 |
Msa0265310 | MtrunA17_Chr8g0371131 | 53.623 | 69 | 32 | 0 | 77 | 145 | 66 | 134 | 2.22e-17 | 78.6 |
Msa0265310 | MtrunA17_Chr4g0045641 | 31.724 | 145 | 83 | 2 | 78 | 210 | 142 | 282 | 5.22e-17 | 82.8 |
Msa0265310 | MtrunA17_Chr8g0389781 | 57.576 | 66 | 28 | 0 | 81 | 146 | 125 | 190 | 6.35e-17 | 82.4 |
Msa0265310 | MtrunA17_Chr6g0472551 | 62.903 | 62 | 23 | 0 | 84 | 145 | 119 | 180 | 7.67e-17 | 82.0 |
Msa0265310 | MtrunA17_Chr2g0330921 | 33.511 | 188 | 100 | 5 | 1 | 163 | 1 | 188 | 1.67e-16 | 80.5 |
Msa0265310 | MtrunA17_Chr7g0273951 | 31.148 | 183 | 84 | 5 | 1 | 150 | 1 | 174 | 2.01e-16 | 80.5 |
Msa0265310 | MtrunA17_Chr1g0172611 | 26.403 | 303 | 170 | 10 | 84 | 373 | 107 | 369 | 2.21e-16 | 80.1 |
Msa0265310 | MtrunA17_Chr1g0203711 | 56.061 | 66 | 29 | 0 | 77 | 142 | 110 | 175 | 3.97e-16 | 79.7 |
Msa0265310 | MtrunA17_Chr7g0273861 | 50.000 | 66 | 33 | 0 | 81 | 146 | 124 | 189 | 2.49e-15 | 77.4 |
Msa0265310 | MtrunA17_Chr5g0416161 | 38.614 | 101 | 62 | 0 | 60 | 160 | 97 | 197 | 3.07e-13 | 71.6 |
Msa0265310 | MtrunA17_Chr1g0156121 | 50.746 | 67 | 33 | 0 | 82 | 148 | 124 | 190 | 6.90e-13 | 70.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0265310 | AT1G72670.1 | 46.698 | 424 | 165 | 18 | 1 | 392 | 1 | 395 | 4.67e-88 | 273 |
Msa0265310 | AT2G26180.1 | 48.095 | 420 | 168 | 13 | 1 | 389 | 1 | 401 | 2.27e-85 | 266 |
Msa0265310 | AT1G17480.1 | 41.758 | 364 | 161 | 12 | 1 | 343 | 1 | 334 | 1.05e-62 | 206 |
Msa0265310 | AT5G03040.1 | 39.904 | 208 | 115 | 5 | 48 | 253 | 80 | 279 | 1.14e-32 | 128 |
Msa0265310 | AT5G03040.3 | 39.904 | 208 | 115 | 5 | 48 | 253 | 80 | 279 | 1.14e-32 | 128 |
Msa0265310 | AT5G03040.2 | 39.904 | 208 | 115 | 5 | 48 | 253 | 80 | 279 | 1.14e-32 | 128 |
Msa0265310 | AT3G22190.3 | 48.901 | 182 | 77 | 4 | 80 | 257 | 86 | 255 | 7.46e-32 | 125 |
Msa0265310 | AT3G22190.2 | 48.901 | 182 | 77 | 4 | 80 | 257 | 86 | 255 | 7.46e-32 | 125 |
Msa0265310 | AT3G22190.4 | 48.901 | 182 | 77 | 4 | 80 | 257 | 86 | 255 | 7.46e-32 | 125 |
Msa0265310 | AT3G22190.1 | 48.901 | 182 | 77 | 4 | 80 | 257 | 86 | 255 | 7.46e-32 | 125 |
Msa0265310 | AT1G01110.2 | 36.232 | 207 | 109 | 5 | 72 | 264 | 111 | 308 | 7.95e-27 | 112 |
Msa0265310 | AT4G00820.1 | 38.095 | 189 | 89 | 5 | 80 | 252 | 130 | 306 | 4.47e-26 | 110 |
Msa0265310 | AT3G52290.1 | 37.572 | 173 | 97 | 4 | 81 | 252 | 107 | 269 | 6.65e-25 | 106 |
Msa0265310 | AT3G09710.1 | 37.017 | 181 | 99 | 6 | 80 | 257 | 106 | 274 | 2.08e-24 | 105 |
Msa0265310 | AT3G49260.3 | 35.519 | 183 | 97 | 5 | 84 | 252 | 122 | 297 | 3.65e-24 | 104 |
Msa0265310 | AT3G49260.1 | 35.519 | 183 | 96 | 6 | 84 | 252 | 122 | 296 | 5.66e-24 | 103 |
Msa0265310 | AT3G49260.4 | 35.519 | 183 | 96 | 6 | 84 | 252 | 122 | 296 | 5.66e-24 | 103 |
Msa0265310 | AT3G49260.2 | 35.519 | 183 | 96 | 6 | 84 | 252 | 122 | 296 | 5.66e-24 | 103 |
Msa0265310 | AT3G09710.2 | 34.896 | 192 | 102 | 5 | 80 | 257 | 106 | 288 | 7.16e-24 | 103 |
Msa0265310 | AT4G10640.1 | 28.796 | 382 | 190 | 12 | 7 | 346 | 18 | 359 | 4.03e-23 | 100 |
Msa0265310 | AT4G14750.1 | 28.819 | 288 | 150 | 10 | 1 | 250 | 1 | 271 | 1.02e-22 | 99.4 |
Msa0265310 | AT4G14750.3 | 28.819 | 288 | 150 | 10 | 1 | 250 | 60 | 330 | 1.75e-22 | 99.4 |
Msa0265310 | AT4G14750.2 | 28.819 | 288 | 150 | 10 | 1 | 250 | 60 | 330 | 1.95e-22 | 99.4 |
Msa0265310 | AT3G59690.2 | 37.324 | 142 | 75 | 3 | 73 | 210 | 161 | 292 | 1.02e-20 | 94.7 |
Msa0265310 | AT3G59690.1 | 37.324 | 142 | 75 | 3 | 73 | 210 | 161 | 292 | 1.02e-20 | 94.7 |
Msa0265310 | AT3G15050.1 | 31.429 | 210 | 119 | 5 | 84 | 284 | 52 | 245 | 1.63e-20 | 90.9 |
Msa0265310 | AT2G26410.2 | 34.054 | 185 | 103 | 5 | 80 | 257 | 146 | 318 | 6.27e-20 | 92.4 |
Msa0265310 | AT2G26410.1 | 34.054 | 185 | 103 | 5 | 80 | 257 | 146 | 318 | 6.27e-20 | 92.4 |
Msa0265310 | AT2G33990.1 | 31.818 | 176 | 109 | 3 | 81 | 256 | 46 | 210 | 8.60e-19 | 85.9 |
Msa0265310 | AT1G18840.1 | 45.745 | 94 | 47 | 1 | 79 | 168 | 106 | 199 | 4.60e-18 | 86.7 |
Msa0265310 | AT1G18840.3 | 45.745 | 94 | 47 | 1 | 79 | 168 | 106 | 199 | 4.60e-18 | 86.7 |
Msa0265310 | AT1G18840.2 | 45.745 | 94 | 47 | 1 | 79 | 168 | 106 | 199 | 4.60e-18 | 86.7 |
Msa0265310 | AT4G23060.1 | 58.108 | 74 | 31 | 0 | 82 | 155 | 167 | 240 | 5.46e-18 | 86.3 |
Msa0265310 | AT4G29150.1 | 42.500 | 120 | 61 | 2 | 70 | 181 | 119 | 238 | 1.74e-17 | 84.0 |
Msa0265310 | AT5G13460.1 | 36.552 | 145 | 71 | 4 | 76 | 208 | 103 | 238 | 5.35e-17 | 82.8 |
Msa0265310 | AT1G51960.1 | 50.000 | 80 | 37 | 2 | 70 | 148 | 89 | 166 | 7.46e-17 | 81.6 |
Msa0265310 | AT3G51380.1 | 57.576 | 66 | 28 | 0 | 80 | 145 | 35 | 100 | 1.04e-16 | 75.9 |
Msa0265310 | AT3G16490.1 | 44.565 | 92 | 49 | 1 | 81 | 170 | 106 | 197 | 1.11e-16 | 81.6 |
Msa0265310 | AT5G07240.1 | 28.819 | 288 | 147 | 9 | 81 | 364 | 104 | 337 | 2.73e-16 | 80.5 |
Msa0265310 | AT5G07240.2 | 28.819 | 288 | 147 | 9 | 81 | 364 | 150 | 383 | 4.86e-16 | 80.1 |
Msa0265310 | AT1G14380.1 | 34.356 | 163 | 89 | 4 | 1 | 148 | 1 | 160 | 1.34e-15 | 79.3 |
Msa0265310 | AT1G14380.3 | 34.356 | 163 | 89 | 4 | 1 | 148 | 1 | 160 | 1.34e-15 | 79.3 |
Msa0265310 | AT1G14380.4 | 34.356 | 163 | 89 | 4 | 1 | 148 | 1 | 160 | 1.34e-15 | 79.3 |
Msa0265310 | AT1G14380.6 | 34.356 | 163 | 89 | 4 | 1 | 148 | 1 | 160 | 1.82e-15 | 79.0 |
Msa0265310 | AT1G14380.5 | 34.356 | 163 | 89 | 4 | 1 | 148 | 1 | 160 | 1.82e-15 | 79.0 |
Msa0265310 | AT1G14380.2 | 34.356 | 163 | 89 | 4 | 1 | 148 | 1 | 160 | 1.82e-15 | 79.0 |
Msa0265310 | AT1G14380.7 | 33.750 | 160 | 94 | 3 | 1 | 148 | 1 | 160 | 2.19e-15 | 78.6 |
Msa0265310 | AT1G74690.1 | 51.429 | 70 | 34 | 0 | 79 | 148 | 110 | 179 | 2.19e-15 | 78.6 |
Msa0265310 | AT5G03960.3 | 38.060 | 134 | 80 | 2 | 84 | 214 | 110 | 243 | 2.13e-14 | 74.7 |
Msa0265310 | AT5G03960.2 | 38.060 | 134 | 80 | 2 | 84 | 214 | 110 | 243 | 2.13e-14 | 74.7 |
Msa0265310 | AT5G03960.1 | 38.060 | 134 | 80 | 2 | 84 | 214 | 109 | 242 | 2.18e-14 | 74.7 |
Msa0265310 | AT2G43680.1 | 33.099 | 142 | 88 | 4 | 67 | 208 | 311 | 445 | 2.51e-14 | 75.5 |
Msa0265310 | AT2G43680.4 | 33.099 | 142 | 88 | 4 | 67 | 208 | 310 | 444 | 2.53e-14 | 75.5 |
Msa0265310 | AT2G43680.2 | 33.099 | 142 | 88 | 4 | 67 | 208 | 310 | 444 | 2.53e-14 | 75.5 |
Msa0265310 | AT2G43680.3 | 33.099 | 142 | 88 | 4 | 67 | 208 | 310 | 444 | 2.53e-14 | 75.5 |
Msa0265310 | AT2G43680.5 | 33.099 | 142 | 88 | 4 | 67 | 208 | 310 | 444 | 2.53e-14 | 75.5 |
Msa0265310 | AT1G19870.1 | 35.338 | 133 | 68 | 3 | 60 | 176 | 177 | 307 | 1.07e-13 | 73.6 |
Msa0265310 | AT1G19870.2 | 38.938 | 113 | 56 | 2 | 75 | 176 | 14 | 124 | 1.18e-13 | 73.2 |
Msa0265310 | AT3G49380.1 | 36.134 | 119 | 65 | 2 | 27 | 138 | 52 | 166 | 2.06e-13 | 71.6 |
Msa0265310 | AT5G62070.1 | 64.151 | 53 | 19 | 0 | 84 | 136 | 119 | 171 | 5.91e-13 | 70.5 |
Find 96 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTGACCCTTCAGTTAATTTA+TGG | 0.180664 | 2_2:-65595033 | Msa0265310:CDS |
CAATGGGTGTTTCTGGAAAA+TGG | 0.187083 | 2_2:-65597277 | Msa0265310:CDS |
GTTAGCCACTTTCTCATAAA+TGG | 0.214297 | 2_2:+65594797 | None:intergenic |
GTAGGGTTGTGTTGTGAAAT+TGG | 0.229055 | 2_2:+65597328 | None:intergenic |
TAGGGTTGTGTTGTGAAATT+GGG | 0.233355 | 2_2:+65597329 | None:intergenic |
GGCTCTCTTTCGAGCCTTCT+TGG | 0.249229 | 2_2:-65596925 | Msa0265310:intron |
GCTATGTCTGTGGGGATTAC+AGG | 0.271977 | 2_2:+65594653 | None:intergenic |
TGATAATAACTTGCCCTTAG+AGG | 0.285753 | 2_2:+65594992 | None:intergenic |
CTAAAGATTTCATCCTTATC+AGG | 0.290356 | 2_2:-65596974 | Msa0265310:CDS |
TCACTCTTCCTGCTTGAGAT+TGG | 0.302121 | 2_2:+65595409 | None:intergenic |
TTAACTTCATCTGCAGTTCC+AGG | 0.344133 | 2_2:+65595721 | None:intergenic |
GCAAGCTCTGGTTAGGGTTC+AGG | 0.355190 | 2_2:-65595986 | Msa0265310:CDS |
ATGGGCTGCTATTCGCATTC+AGG | 0.358781 | 2_2:-65596946 | Msa0265310:CDS |
AACAAGCAGCTGTTACTCTA+AGG | 0.370485 | 2_2:-65596014 | Msa0265310:CDS |
CTGATAAGGATGAAATCTTT+AGG | 0.373735 | 2_2:+65596975 | None:intergenic |
CACAGTGAGATGAACTGATT+TGG | 0.379942 | 2_2:-65594870 | Msa0265310:three_prime_UTR |
GTAATAGTACTAAGAAGAAA+TGG | 0.387683 | 2_2:-65597124 | Msa0265310:CDS |
AGGCTAAGCTCAAAACTTAC+AGG | 0.390491 | 2_2:-65595159 | Msa0265310:CDS |
GGTGTATGCAAGCTCTGGTT+AGG | 0.390529 | 2_2:-65595993 | Msa0265310:CDS |
TTATCAACTTCATGTACATC+TGG | 0.395939 | 2_2:-65595259 | Msa0265310:CDS |
ATCGTTGTGCAACACCTCTA+AGG | 0.396953 | 2_2:-65595006 | Msa0265310:CDS |
AGCAGCACCAGTCTTCTTCA+TGG | 0.398235 | 2_2:+65597067 | None:intergenic |
CAAGGATGGTGTGAAATTCC+TGG | 0.403362 | 2_2:-65595739 | Msa0265310:CDS |
GATAATAGTATAAACAGTTC+TGG | 0.410910 | 2_2:-65595058 | Msa0265310:CDS |
TTCCTTCTTGATTGAAAAGT+AGG | 0.412386 | 2_2:+65595376 | None:intergenic |
CATTGCTCTATCCCTCTTGA+TGG | 0.414300 | 2_2:+65595669 | None:intergenic |
TTCCTAAGCTCTTGTTGTCA+TGG | 0.417603 | 2_2:+65595482 | None:intergenic |
AGTTATTATCAAAATCGATA+TGG | 0.428695 | 2_2:-65594980 | Msa0265310:CDS |
CAGCCCATTCCTGCCTGATA+AGG | 0.431812 | 2_2:+65596961 | None:intergenic |
CATCCTTATCAGGCAGGAAT+GGG | 0.450099 | 2_2:-65596964 | Msa0265310:CDS |
GTTGCTGTCGTTGTTCGAGC+TGG | 0.450476 | 2_2:-65596999 | Msa0265310:CDS |
AAGAGCTTTGAGAGCATTGA+GGG | 0.454446 | 2_2:-65596082 | Msa0265310:CDS |
CTAAGAAGAAATGGAAGCTA+TGG | 0.454548 | 2_2:-65597115 | Msa0265310:CDS |
AGGGTTGTGTTGTGAAATTG+GGG | 0.473403 | 2_2:+65597330 | None:intergenic |
TCATCCTTATCAGGCAGGAA+TGG | 0.473411 | 2_2:-65596965 | Msa0265310:CDS |
AATCCCCACAGACATAGCTT+TGG | 0.475015 | 2_2:-65594648 | Msa0265310:three_prime_UTR |
TTGAAATTTGAAAGTGTAGG+AGG | 0.478393 | 2_2:+65597400 | None:intergenic |
TTCCAATAAGAAAACCGATC+AGG | 0.485410 | 2_2:-65597240 | Msa0265310:intron |
AGACTGCAAGCAATATTTAG+AGG | 0.495590 | 2_2:-65596051 | Msa0265310:CDS |
GAAATAGCTTGTTAGAGCGC+TGG | 0.496586 | 2_2:-65595462 | Msa0265310:CDS |
TGCAAGCAATATTTAGAGGC+AGG | 0.511357 | 2_2:-65596047 | Msa0265310:CDS |
TCTAAGGTGTATGCAAGCTC+TGG | 0.513287 | 2_2:-65595998 | Msa0265310:CDS |
GAAGGAATGGTGTGACAACT+AGG | 0.517271 | 2_2:-65595360 | Msa0265310:CDS |
AGATTTCATCCTTATCAGGC+AGG | 0.519223 | 2_2:-65596970 | Msa0265310:CDS |
ATCATCTTCGACTTTAAGCT+CGG | 0.520897 | 2_2:-65595305 | Msa0265310:CDS |
GTGTATGCAAGCTCTGGTTA+GGG | 0.521748 | 2_2:-65595992 | Msa0265310:CDS |
GTTATTATTATCAGCAAGGA+TGG | 0.522365 | 2_2:-65595753 | Msa0265310:intron |
GGCAAGAAGGTGCCATCAAG+AGG | 0.522656 | 2_2:-65595681 | Msa0265310:CDS |
TGATTGTAAATTTACCTGAT+CGG | 0.522844 | 2_2:+65597226 | None:intergenic |
TCTTCAACCATGAAGAAGAC+TGG | 0.527272 | 2_2:-65597074 | Msa0265310:CDS |
TGGCAAACAAACCATGTCCA+TGG | 0.529332 | 2_2:-65595438 | Msa0265310:CDS |
GGCAGCAGCAGTATCGGTAA+TGG | 0.530108 | 2_2:+65597022 | None:intergenic |
CCCTTCAGTTAATTTATGGA+AGG | 0.533849 | 2_2:-65595029 | Msa0265310:CDS |
TTCAGGCACGTGTGAGAGCT+AGG | 0.537833 | 2_2:-65595969 | Msa0265310:CDS |
AACCATGACAACAAGAGCTT+AGG | 0.537945 | 2_2:-65595484 | Msa0265310:CDS |
AGCAACGGCAGCAGCAGTAT+CGG | 0.538131 | 2_2:+65597016 | None:intergenic |
AAGCTAAGAATGAGGCAAGA+AGG | 0.538231 | 2_2:-65595694 | Msa0265310:CDS |
TCAAATTCATGTAGCTAGGT+AGG | 0.539947 | 2_2:+65595194 | None:intergenic |
GAGCTTAAAGTCGAAGATGA+TGG | 0.542387 | 2_2:+65595307 | None:intergenic |
TCCTTCCATAAATTAACTGA+AGG | 0.545088 | 2_2:+65595028 | None:intergenic |
CGGTGCCATTTATGAGAAAG+TGG | 0.546625 | 2_2:-65594802 | Msa0265310:three_prime_UTR |
ATTGGACTCTCCCATGGACA+TGG | 0.548204 | 2_2:+65595427 | None:intergenic |
CAGAATCAGCATGGTTGCGA+TGG | 0.549893 | 2_2:+65595896 | None:intergenic |
TAATCCAAAGCTATGTCTGT+GGG | 0.555077 | 2_2:+65594644 | None:intergenic |
ATTATCAAAATCGATATGGC+AGG | 0.555854 | 2_2:-65594976 | Msa0265310:CDS |
TCGTTGTGCAACACCTCTAA+GGG | 0.556401 | 2_2:-65595005 | Msa0265310:CDS |
CTTGAGATTGGACTCTCCCA+TGG | 0.558321 | 2_2:+65595421 | None:intergenic |
GGTTGTGTTGTGAAATTGGG+GGG | 0.560503 | 2_2:+65597332 | None:intergenic |
AAAAGAAATAGTTACCAAGA+AGG | 0.563052 | 2_2:+65596911 | None:intergenic |
GAGTTCGAAGAGACTCGTAA+TGG | 0.563998 | 2_2:-65595125 | Msa0265310:CDS |
TTTGAGAGCATTGAGGGCAG+TGG | 0.564489 | 2_2:-65596076 | Msa0265310:CDS |
GAAGAGCTTTGAGAGCATTG+AGG | 0.569321 | 2_2:-65596083 | Msa0265310:CDS |
CCTTCCATAAATTAACTGAA+GGG | 0.587260 | 2_2:+65595029 | None:intergenic |
TCTGTCAAATTCATGTAGCT+AGG | 0.592487 | 2_2:+65595190 | None:intergenic |
GAATTTGACAGAATCAACTA+AGG | 0.594832 | 2_2:-65595179 | Msa0265310:CDS |
ATCTATGCCAGAAGCAACAG+AGG | 0.595241 | 2_2:-65595230 | Msa0265310:CDS |
GGGAGAGTCCAATCTCAAGC+AGG | 0.595864 | 2_2:-65595417 | Msa0265310:CDS |
GGCAAACAAACCATGTCCAT+GGG | 0.598464 | 2_2:-65595437 | Msa0265310:CDS |
TTAAAGCAAAGCTAAGAATG+AGG | 0.599503 | 2_2:-65595702 | Msa0265310:CDS |
TGATTCTGTTAAGCTTGTAG+AGG | 0.611493 | 2_2:-65595881 | Msa0265310:intron |
AGCTCGAACAACGACAGCAA+CGG | 0.615911 | 2_2:+65597001 | None:intergenic |
TTAATCCAAAGCTATGTCTG+TGG | 0.618385 | 2_2:+65594643 | None:intergenic |
CATCAAGAGGGATAGAGCAA+TGG | 0.627816 | 2_2:-65595668 | Msa0265310:CDS |
TAGCTTGTTAGAGCGCTGGA+TGG | 0.632949 | 2_2:-65595458 | Msa0265310:CDS |
TCAACACTTAATTACCTGTG+TGG | 0.634403 | 2_2:+65595633 | None:intergenic |
AATTTGAAATTTGAAAGTGT+AGG | 0.634771 | 2_2:+65597397 | None:intergenic |
AAATTTGAAAGTGTAGGAGG+TGG | 0.636927 | 2_2:+65597403 | None:intergenic |
GCAAGAAGGTGCCATCAAGA+GGG | 0.646053 | 2_2:-65595680 | Msa0265310:CDS |
GTGTGAGAGCTAGGAATGTG+AGG | 0.652883 | 2_2:-65595960 | Msa0265310:CDS |
GGGTTGTGTTGTGAAATTGG+GGG | 0.654292 | 2_2:+65597331 | None:intergenic |
CAAGCTTAACAGAATCAGCA+TGG | 0.655634 | 2_2:+65595887 | None:intergenic |
GGCATACTCTCTATCCACAC+AGG | 0.672618 | 2_2:-65595647 | Msa0265310:intron |
AATGTGAGGAAATCTCCAGA+AGG | 0.676143 | 2_2:-65595946 | Msa0265310:CDS |
AATCCAAAGCTATGTCTGTG+GGG | 0.708556 | 2_2:+65594645 | None:intergenic |
CTTTCACTCAATCAATACAG+CGG | 0.736905 | 2_2:-65594822 | Msa0265310:three_prime_UTR |
TCACTGTGTCAAGATGACAA+TGG | 0.742872 | 2_2:+65594885 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTCAAAATATGATAATATA+AGG | + | chr2_2:65595525-65595544 | None:intergenic | 10.0% |
!! | TAAAACAACAACAAAAAAAA+GGG | + | chr2_2:65594818-65594837 | None:intergenic | 15.0% |
!! | TTAAAACAACAACAAAAAAA+AGG | + | chr2_2:65594819-65594838 | None:intergenic | 15.0% |
!!! | TTAATTAGTTTATCTTATGA+TGG | - | chr2_2:65595499-65595518 | Msa0265310:CDS | 15.0% |
!! | TAAAAAGTTGAATTTCAATT+AGG | + | chr2_2:65595576-65595595 | None:intergenic | 15.0% |
!! | AAAGAGAAAGAAAAAATAAA+GGG | + | chr2_2:65595628-65595647 | None:intergenic | 15.0% |
!! | AAAAGAGAAAGAAAAAATAA+AGG | + | chr2_2:65595629-65595648 | None:intergenic | 15.0% |
!!! | TTATTTTTTCTTTCTCTTTT+TGG | - | chr2_2:65595629-65595648 | Msa0265310:intron | 15.0% |
!!! | TGTATTTTAAAAAGAAATAG+AGG | + | chr2_2:65595888-65595907 | None:intergenic | 15.0% |
!!! | TTCTTTTTAAAATACATTGA+AGG | - | chr2_2:65595892-65595911 | Msa0265310:CDS | 15.0% |
!! | ATTACATAATATTCTCTAAA+TGG | - | chr2_2:65596171-65596190 | Msa0265310:intron | 15.0% |
!!! | AATTTGAAATTTGAAAGTGT+AGG | + | chr2_2:65594607-65594626 | None:intergenic | 20.0% |
!! | AAGAGAAAGAAAAAATAAAG+GGG | + | chr2_2:65595627-65595646 | None:intergenic | 20.0% |
!! | TGCAATAAATCCTAAAAAAA+TGG | + | chr2_2:65595771-65595790 | None:intergenic | 20.0% |
!! | TTATAGTATATGCTAACATA+AGG | - | chr2_2:65596212-65596231 | Msa0265310:intron | 20.0% |
!! | TATAGTATATGCTAACATAA+GGG | - | chr2_2:65596213-65596232 | Msa0265310:intron | 20.0% |
!! | AGTTATTATCAAAATCGATA+TGG | - | chr2_2:65597021-65597040 | Msa0265310:CDS | 20.0% |
!!! | TAAATTTTGAGTAAGAAGTA+CGG | - | chr2_2:65597407-65597426 | Msa0265310:five_prime_UTR | 20.0% |
! | TGATTGTAAATTTACCTGAT+CGG | + | chr2_2:65594778-65594797 | None:intergenic | 25.0% |
! | GTAATAGTACTAAGAAGAAA+TGG | - | chr2_2:65594877-65594896 | Msa0265310:three_prime_UTR | 25.0% |
! | AAAAGAAATAGTTACCAAGA+AGG | + | chr2_2:65595093-65595112 | None:intergenic | 25.0% |
! | AAATCATTCAACCCAAATAA+AGG | + | chr2_2:65595320-65595339 | None:intergenic | 25.0% |
!! | ATTTGCTAGTGTTTATAACT+CGG | + | chr2_2:65595360-65595379 | None:intergenic | 25.0% |
! | GTTGAATTTCAATTAGGTAA+AGG | + | chr2_2:65595570-65595589 | None:intergenic | 25.0% |
!! | TTTTCTTTCTCTTTTTGGAT+TGG | - | chr2_2:65595634-65595653 | Msa0265310:intron | 25.0% |
!! | TTTCTTTCTCTTTTTGGATT+GGG | - | chr2_2:65595635-65595654 | Msa0265310:intron | 25.0% |
!!! | TAAACACTGTCCATTTTTTT+AGG | - | chr2_2:65595758-65595777 | Msa0265310:intron | 25.0% |
! | AAAAAAAAAGTAACCAAGAG+TGG | + | chr2_2:65595804-65595823 | None:intergenic | 25.0% |
!!! | AATGGTTATTTTGAGTTACA+AGG | - | chr2_2:65596189-65596208 | Msa0265310:intron | 25.0% |
! | AAAAGCAAGCAAAGATATAT+TGG | + | chr2_2:65596425-65596444 | None:intergenic | 25.0% |
! | GATAATAGTATAAACAGTTC+TGG | - | chr2_2:65596943-65596962 | Msa0265310:CDS | 25.0% |
!! | GTAGATAAAAATTTTACGTG+AGG | - | chr2_2:65597234-65597253 | Msa0265310:intron | 25.0% |
! | TTGAAATTTGAAAGTGTAGG+AGG | + | chr2_2:65594604-65594623 | None:intergenic | 30.0% |
! | AGTGTTAATGTTGTTTGTTC+AGG | - | chr2_2:65594845-65594864 | Msa0265310:three_prime_UTR | 30.0% |
CTGATAAGGATGAAATCTTT+AGG | + | chr2_2:65595029-65595048 | None:intergenic | 30.0% | |
CTAAAGATTTCATCCTTATC+AGG | - | chr2_2:65595027-65595046 | Msa0265310:CDS | 30.0% | |
TGAAATTCCAAGACCAATTA+TGG | - | chr2_2:65595168-65595187 | Msa0265310:CDS | 30.0% | |
CAATTATGGATCAGAATTCA+GGG | - | chr2_2:65595182-65595201 | Msa0265310:CDS | 30.0% | |
TTACAAGATCTACCAATAGT+TGG | - | chr2_2:65595224-65595243 | Msa0265310:CDS | 30.0% | |
TACAAGATCTACCAATAGTT+GGG | - | chr2_2:65595225-65595244 | Msa0265310:CDS | 30.0% | |
GGATTTGGGAGTTTAAAAAA+CGG | - | chr2_2:65595246-65595265 | Msa0265310:CDS | 30.0% | |
GACTTAACATGAAAACACAA+AGG | + | chr2_2:65595273-65595292 | None:intergenic | 30.0% | |
!!! | TCCTCCTTTTTTCCTTTATT+TGG | - | chr2_2:65595305-65595324 | Msa0265310:CDS | 30.0% |
!!! | CCTCCTTTTTTCCTTTATTT+GGG | - | chr2_2:65595306-65595325 | Msa0265310:CDS | 30.0% |
CAACCCAAATAAAGGAAAAA+AGG | + | chr2_2:65595312-65595331 | None:intergenic | 30.0% | |
GTTGAATGATTTACGTAGTT+AGG | - | chr2_2:65595328-65595347 | Msa0265310:CDS | 30.0% | |
TAAAACAATGTGAAGAAGAG+TGG | + | chr2_2:65595409-65595428 | None:intergenic | 30.0% | |
! | ATTTTACAGTCATCTTAAGG+AGG | + | chr2_2:65595601-65595620 | None:intergenic | 30.0% |
! | AGGATTTTACAGTCATCTTA+AGG | + | chr2_2:65595604-65595623 | None:intergenic | 30.0% |
AGAAAGAAAAAATAAAGGGG+AGG | + | chr2_2:65595624-65595643 | None:intergenic | 30.0% | |
! | TTCTTTCTCTTTTTGGATTG+GGG | - | chr2_2:65595636-65595655 | Msa0265310:intron | 30.0% |
CCTTGCTGATAATAATAACA+TGG | + | chr2_2:65596247-65596266 | None:intergenic | 30.0% | |
CCATGTTATTATTATCAGCA+AGG | - | chr2_2:65596244-65596263 | Msa0265310:intron | 30.0% | |
GTTATTATTATCAGCAAGGA+TGG | - | chr2_2:65596248-65596267 | Msa0265310:intron | 30.0% | |
TTAAAGCAAAGCTAAGAATG+AGG | - | chr2_2:65596299-65596318 | Msa0265310:intron | 30.0% | |
!!! | GATTTTGTGGATTTTGAGTT+TGG | + | chr2_2:65596472-65596491 | None:intergenic | 30.0% |
!! | TTCCTACTTTTCAATCAAGA+AGG | - | chr2_2:65596623-65596642 | Msa0265310:intron | 30.0% |
TTCCTTCTTGATTGAAAAGT+AGG | + | chr2_2:65596628-65596647 | None:intergenic | 30.0% | |
! | ACTTTTCAATCAAGAAGGAA+TGG | - | chr2_2:65596628-65596647 | Msa0265310:intron | 30.0% |
TTATCAACTTCATGTACATC+TGG | - | chr2_2:65596742-65596761 | Msa0265310:intron | 30.0% | |
GAATTTGACAGAATCAACTA+AGG | - | chr2_2:65596822-65596841 | Msa0265310:intron | 30.0% | |
! | ACAAGTACAACTTTTCTGAA+TGG | - | chr2_2:65596919-65596938 | Msa0265310:intron | 30.0% |
CCTTCCATAAATTAACTGAA+GGG | + | chr2_2:65596975-65596994 | None:intergenic | 30.0% | |
TCCTTCCATAAATTAACTGA+AGG | + | chr2_2:65596976-65596995 | None:intergenic | 30.0% | |
ATTATCAAAATCGATATGGC+AGG | - | chr2_2:65597025-65597044 | Msa0265310:CDS | 30.0% | |
! | AAATTTGAAAGTGTAGGAGG+TGG | + | chr2_2:65594601-65594620 | None:intergenic | 35.0% |
TAGGGTTGTGTTGTGAAATT+GGG | + | chr2_2:65594675-65594694 | None:intergenic | 35.0% | |
! | CGATTTTTGCAGAGATTGTA+GGG | + | chr2_2:65594693-65594712 | None:intergenic | 35.0% |
CCTACAATCTCTGCAAAAAT+CGG | - | chr2_2:65594691-65594710 | Msa0265310:three_prime_UTR | 35.0% | |
!! | AAATCGGTTCTTTTCTCCAA+TGG | - | chr2_2:65594707-65594726 | Msa0265310:three_prime_UTR | 35.0% |
!! | AATCGGTTCTTTTCTCCAAT+GGG | - | chr2_2:65594708-65594727 | Msa0265310:three_prime_UTR | 35.0% |
TTCCAATAAGAAAACCGATC+AGG | - | chr2_2:65594761-65594780 | Msa0265310:three_prime_UTR | 35.0% | |
!! | TACCTGATCGGTTTTCTTAT+TGG | + | chr2_2:65594766-65594785 | None:intergenic | 35.0% |
CTAAGAAGAAATGGAAGCTA+TGG | - | chr2_2:65594886-65594905 | Msa0265310:three_prime_UTR | 35.0% | |
CCACAGCAAAAATCATAGAA+AGG | + | chr2_2:65595116-65595135 | None:intergenic | 35.0% | |
! | CCTTTCTATGATTTTTGCTG+TGG | - | chr2_2:65595113-65595132 | Msa0265310:CDS | 35.0% |
! | TTCTGATCCATAATTGGTCT+TGG | + | chr2_2:65595178-65595197 | None:intergenic | 35.0% |
CCTGAATTCTGATCCATAAT+TGG | + | chr2_2:65595184-65595203 | None:intergenic | 35.0% | |
CCAATTATGGATCAGAATTC+AGG | - | chr2_2:65595181-65595200 | Msa0265310:CDS | 35.0% | |
ATCTACCAATAGTTGGGATT+TGG | - | chr2_2:65595231-65595250 | Msa0265310:CDS | 35.0% | |
TCTACCAATAGTTGGGATTT+GGG | - | chr2_2:65595232-65595251 | Msa0265310:CDS | 35.0% | |
CCCAAATAAAGGAAAAAAGG+AGG | + | chr2_2:65595309-65595328 | None:intergenic | 35.0% | |
!! | TCTTTCTCTTTTTGGATTGG+GGG | - | chr2_2:65595637-65595656 | Msa0265310:intron | 35.0% |
! | AGTAGGTAGGTTCTTTTGTA+TGG | - | chr2_2:65595676-65595695 | Msa0265310:CDS | 35.0% |
! | TAGGTTCTTTTGTATGGTTG+TGG | - | chr2_2:65595682-65595701 | Msa0265310:CDS | 35.0% |
AGACTGCAAGCAATATTTAG+AGG | - | chr2_2:65595950-65595969 | Msa0265310:CDS | 35.0% | |
TGATTCTGTTAAGCTTGTAG+AGG | - | chr2_2:65596120-65596139 | Msa0265310:intron | 35.0% | |
TCAACACTTAATTACCTGTG+TGG | + | chr2_2:65596371-65596390 | None:intergenic | 35.0% | |
!!! | GAAAAGAGACACTGATTTTG+TGG | + | chr2_2:65596485-65596504 | None:intergenic | 35.0% |
ATCATCTTCGACTTTAAGCT+CGG | - | chr2_2:65596696-65596715 | Msa0265310:intron | 35.0% | |
TCAAATTCATGTAGCTAGGT+AGG | + | chr2_2:65596810-65596829 | None:intergenic | 35.0% | |
TCTGTCAAATTCATGTAGCT+AGG | + | chr2_2:65596814-65596833 | None:intergenic | 35.0% | |
CTGACCCTTCAGTTAATTTA+TGG | - | chr2_2:65596968-65596987 | Msa0265310:CDS | 35.0% | |
CCCTTCAGTTAATTTATGGA+AGG | - | chr2_2:65596972-65596991 | Msa0265310:CDS | 35.0% | |
! | TGATAATAACTTGCCCTTAG+AGG | + | chr2_2:65597012-65597031 | None:intergenic | 35.0% |
CTTTCACTCAATCAATACAG+CGG | - | chr2_2:65597179-65597198 | Msa0265310:intron | 35.0% | |
! | GTTAGCCACTTTCTCATAAA+TGG | + | chr2_2:65597207-65597226 | None:intergenic | 35.0% |
TAATCCAAAGCTATGTCTGT+GGG | + | chr2_2:65597360-65597379 | None:intergenic | 35.0% | |
TTAATCCAAAGCTATGTCTG+TGG | + | chr2_2:65597361-65597380 | None:intergenic | 35.0% | |
AGGGTTGTGTTGTGAAATTG+GGG | + | chr2_2:65594674-65594693 | None:intergenic | 40.0% | |
GTAGGGTTGTGTTGTGAAAT+TGG | + | chr2_2:65594676-65594695 | None:intergenic | 40.0% | |
! | CCGATTTTTGCAGAGATTGT+AGG | + | chr2_2:65594694-65594713 | None:intergenic | 40.0% |
! | TTTTCTCCAATGGGTGTTTC+TGG | - | chr2_2:65594717-65594736 | Msa0265310:three_prime_UTR | 40.0% |
! | CATTTTCCAGAAACACCCAT+TGG | + | chr2_2:65594726-65594745 | None:intergenic | 40.0% |
!! | CAATGGGTGTTTCTGGAAAA+TGG | - | chr2_2:65594724-65594743 | Msa0265310:three_prime_UTR | 40.0% |
TCTTCAACCATGAAGAAGAC+TGG | - | chr2_2:65594927-65594946 | Msa0265310:three_prime_UTR | 40.0% | |
AGATTTCATCCTTATCAGGC+AGG | - | chr2_2:65595031-65595050 | Msa0265310:CDS | 40.0% | |
TGGATCAGAATTCAGGGATT+AGG | - | chr2_2:65595188-65595207 | Msa0265310:CDS | 40.0% | |
AACTCCCAAATCCCAACTAT+TGG | + | chr2_2:65595239-65595258 | None:intergenic | 40.0% | |
!! | AAGAGCTTTGAGAGCATTGA+GGG | - | chr2_2:65595919-65595938 | Msa0265310:CDS | 40.0% |
TGCAAGCAATATTTAGAGGC+AGG | - | chr2_2:65595954-65595973 | Msa0265310:CDS | 40.0% | |
AACAAGCAGCTGTTACTCTA+AGG | - | chr2_2:65595987-65596006 | Msa0265310:CDS | 40.0% | |
AATGTGAGGAAATCTCCAGA+AGG | - | chr2_2:65596055-65596074 | Msa0265310:CDS | 40.0% | |
CAAGCTTAACAGAATCAGCA+TGG | + | chr2_2:65596117-65596136 | None:intergenic | 40.0% | |
TTAACTTCATCTGCAGTTCC+AGG | + | chr2_2:65596283-65596302 | None:intergenic | 40.0% | |
AAGCTAAGAATGAGGCAAGA+AGG | - | chr2_2:65596307-65596326 | Msa0265310:intron | 40.0% | |
AACCATGACAACAAGAGCTT+AGG | - | chr2_2:65596517-65596536 | Msa0265310:intron | 40.0% | |
! | TTCCTAAGCTCTTGTTGTCA+TGG | + | chr2_2:65596522-65596541 | None:intergenic | 40.0% |
GAGCTTAAAGTCGAAGATGA+TGG | + | chr2_2:65596697-65596716 | None:intergenic | 40.0% | |
!! | TCTTTTTCCTCTGTTGCTTC+TGG | + | chr2_2:65596781-65596800 | None:intergenic | 40.0% |
AGGCTAAGCTCAAAACTTAC+AGG | - | chr2_2:65596842-65596861 | Msa0265310:intron | 40.0% | |
TCACTGTGTCAAGATGACAA+TGG | + | chr2_2:65597119-65597138 | None:intergenic | 40.0% | |
CACAGTGAGATGAACTGATT+TGG | - | chr2_2:65597131-65597150 | Msa0265310:CDS | 40.0% | |
AATCCAAAGCTATGTCTGTG+GGG | + | chr2_2:65597359-65597378 | None:intergenic | 40.0% | |
GGTTGTGTTGTGAAATTGGG+GGG | + | chr2_2:65594672-65594691 | None:intergenic | 45.0% | |
GGGTTGTGTTGTGAAATTGG+GGG | + | chr2_2:65594673-65594692 | None:intergenic | 45.0% | |
TCATCCTTATCAGGCAGGAA+TGG | - | chr2_2:65595036-65595055 | Msa0265310:CDS | 45.0% | |
CATCCTTATCAGGCAGGAAT+GGG | - | chr2_2:65595037-65595056 | Msa0265310:CDS | 45.0% | |
!! | TTCTCTTTTTGGATTGGGGG+AGG | - | chr2_2:65595640-65595659 | Msa0265310:intron | 45.0% |
!! | TCTCTTTTTGGATTGGGGGA+GGG | - | chr2_2:65595641-65595660 | Msa0265310:intron | 45.0% |
GGTCAATGACTTCAGTAGGT+AGG | - | chr2_2:65595663-65595682 | Msa0265310:CDS | 45.0% | |
!! | TGTGGTGCTACTAATCTGTC+AGG | - | chr2_2:65595700-65595719 | Msa0265310:CDS | 45.0% |
!! | GTGGTGCTACTAATCTGTCA+GGG | - | chr2_2:65595701-65595720 | Msa0265310:CDS | 45.0% |
!! | TGGTGCTACTAATCTGTCAG+GGG | - | chr2_2:65595702-65595721 | Msa0265310:CDS | 45.0% |
GCAGAAATATCAGCCACTCT+TGG | - | chr2_2:65595788-65595807 | Msa0265310:intron | 45.0% | |
!! | GAAGAGCTTTGAGAGCATTG+AGG | - | chr2_2:65595918-65595937 | Msa0265310:CDS | 45.0% |
! | TCTAAGGTGTATGCAAGCTC+TGG | - | chr2_2:65596003-65596022 | Msa0265310:CDS | 45.0% |
! | GTGTATGCAAGCTCTGGTTA+GGG | - | chr2_2:65596009-65596028 | Msa0265310:CDS | 45.0% |
CAAGGATGGTGTGAAATTCC+TGG | - | chr2_2:65596262-65596281 | Msa0265310:intron | 45.0% | |
CATTGCTCTATCCCTCTTGA+TGG | + | chr2_2:65596335-65596354 | None:intergenic | 45.0% | |
CATCAAGAGGGATAGAGCAA+TGG | - | chr2_2:65596333-65596352 | Msa0265310:intron | 45.0% | |
!! | GAAATAGCTTGTTAGAGCGC+TGG | - | chr2_2:65596539-65596558 | Msa0265310:intron | 45.0% |
TGGCAAACAAACCATGTCCA+TGG | - | chr2_2:65596563-65596582 | Msa0265310:intron | 45.0% | |
GGCAAACAAACCATGTCCAT+GGG | - | chr2_2:65596564-65596583 | Msa0265310:intron | 45.0% | |
TCACTCTTCCTGCTTGAGAT+TGG | + | chr2_2:65596595-65596614 | None:intergenic | 45.0% | |
GAAGGAATGGTGTGACAACT+AGG | - | chr2_2:65596641-65596660 | Msa0265310:intron | 45.0% | |
ATCTATGCCAGAAGCAACAG+AGG | - | chr2_2:65596771-65596790 | Msa0265310:intron | 45.0% | |
GAGTTCGAAGAGACTCGTAA+TGG | - | chr2_2:65596876-65596895 | Msa0265310:intron | 45.0% | |
ATCGTTGTGCAACACCTCTA+AGG | - | chr2_2:65596995-65597014 | Msa0265310:CDS | 45.0% | |
TCGTTGTGCAACACCTCTAA+GGG | - | chr2_2:65596996-65597015 | Msa0265310:CDS | 45.0% | |
!! | CGGTGCCATTTATGAGAAAG+TGG | - | chr2_2:65597199-65597218 | Msa0265310:intron | 45.0% |
AATCCCCACAGACATAGCTT+TGG | - | chr2_2:65597353-65597372 | Msa0265310:five_prime_UTR | 45.0% | |
AGCAGCACCAGTCTTCTTCA+TGG | + | chr2_2:65594937-65594956 | None:intergenic | 50.0% | |
AGCTCGAACAACGACAGCAA+CGG | + | chr2_2:65595003-65595022 | None:intergenic | 50.0% | |
! | ATGGGCTGCTATTCGCATTC+AGG | - | chr2_2:65595055-65595074 | Msa0265310:CDS | 50.0% |
!! | CTCTTTTTGGATTGGGGGAG+GGG | - | chr2_2:65595642-65595661 | Msa0265310:intron | 50.0% |
GAGGGGTCAATGACTTCAGT+AGG | - | chr2_2:65595659-65595678 | Msa0265310:CDS | 50.0% | |
!! | TTTGAGAGCATTGAGGGCAG+TGG | - | chr2_2:65595925-65595944 | Msa0265310:CDS | 50.0% |
! | GGTGTATGCAAGCTCTGGTT+AGG | - | chr2_2:65596008-65596027 | Msa0265310:CDS | 50.0% |
GTGTGAGAGCTAGGAATGTG+AGG | - | chr2_2:65596041-65596060 | Msa0265310:CDS | 50.0% | |
!! | TGCTGCACTGCTTTTCCTTC+TGG | + | chr2_2:65596073-65596092 | None:intergenic | 50.0% |
CAGAATCAGCATGGTTGCGA+TGG | + | chr2_2:65596108-65596127 | None:intergenic | 50.0% | |
!! | GCAAGAAGGTGCCATCAAGA+GGG | - | chr2_2:65596321-65596340 | Msa0265310:intron | 50.0% |
GGCATACTCTCTATCCACAC+AGG | - | chr2_2:65596354-65596373 | Msa0265310:intron | 50.0% | |
!! | TAGCTTGTTAGAGCGCTGGA+TGG | - | chr2_2:65596543-65596562 | Msa0265310:intron | 50.0% |
ATTGGACTCTCCCATGGACA+TGG | + | chr2_2:65596577-65596596 | None:intergenic | 50.0% | |
CTTGAGATTGGACTCTCCCA+TGG | + | chr2_2:65596583-65596602 | None:intergenic | 50.0% | |
GCTATGTCTGTGGGGATTAC+AGG | + | chr2_2:65597351-65597370 | None:intergenic | 50.0% | |
!! | GGCAGCAGCAGTATCGGTAA+TGG | + | chr2_2:65594982-65595001 | None:intergenic | 55.0% |
AGCAACGGCAGCAGCAGTAT+CGG | + | chr2_2:65594988-65595007 | None:intergenic | 55.0% | |
GTTGCTGTCGTTGTTCGAGC+TGG | - | chr2_2:65595002-65595021 | Msa0265310:CDS | 55.0% | |
CAGCCCATTCCTGCCTGATA+AGG | + | chr2_2:65595043-65595062 | None:intergenic | 55.0% | |
GGCTCTCTTTCGAGCCTTCT+TGG | - | chr2_2:65595076-65595095 | Msa0265310:CDS | 55.0% | |
! | GCAAGCTCTGGTTAGGGTTC+AGG | - | chr2_2:65596015-65596034 | Msa0265310:CDS | 55.0% |
TTCAGGCACGTGTGAGAGCT+AGG | - | chr2_2:65596032-65596051 | Msa0265310:CDS | 55.0% | |
!! | GGCAAGAAGGTGCCATCAAG+AGG | - | chr2_2:65596320-65596339 | Msa0265310:intron | 55.0% |
GGGAGAGTCCAATCTCAAGC+AGG | - | chr2_2:65596584-65596603 | Msa0265310:intron | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_2 | gene | 65594593 | 65597430 | 65594593 | ID=Msa0265310;Name=Msa0265310 |
chr2_2 | mRNA | 65594593 | 65597430 | 65594593 | ID=Msa0265310-mRNA-1;Parent=Msa0265310;Name=Msa0265310-mRNA-1;_AED=0.07;_eAED=0.07;_QI=133|1|1|1|1|1|5|377|410 |
chr2_2 | exon | 65594593 | 65595572 | 65594593 | ID=Msa0265310-mRNA-1:exon:20699;Parent=Msa0265310-mRNA-1 |
chr2_2 | exon | 65595648 | 65595761 | 65595648 | ID=Msa0265310-mRNA-1:exon:20698;Parent=Msa0265310-mRNA-1 |
chr2_2 | exon | 65595882 | 65596109 | 65595882 | ID=Msa0265310-mRNA-1:exon:20697;Parent=Msa0265310-mRNA-1 |
chr2_2 | exon | 65596926 | 65597156 | 65596926 | ID=Msa0265310-mRNA-1:exon:20696;Parent=Msa0265310-mRNA-1 |
chr2_2 | exon | 65597241 | 65597430 | 65597241 | ID=Msa0265310-mRNA-1:exon:20695;Parent=Msa0265310-mRNA-1 |
chr2_2 | five_prime_UTR | 65597298 | 65597430 | 65597298 | ID=Msa0265310-mRNA-1:five_prime_utr;Parent=Msa0265310-mRNA-1 |
chr2_2 | CDS | 65597241 | 65597297 | 65597241 | ID=Msa0265310-mRNA-1:cds;Parent=Msa0265310-mRNA-1 |
chr2_2 | CDS | 65596926 | 65597156 | 65596926 | ID=Msa0265310-mRNA-1:cds;Parent=Msa0265310-mRNA-1 |
chr2_2 | CDS | 65595882 | 65596109 | 65595882 | ID=Msa0265310-mRNA-1:cds;Parent=Msa0265310-mRNA-1 |
chr2_2 | CDS | 65595648 | 65595761 | 65595648 | ID=Msa0265310-mRNA-1:cds;Parent=Msa0265310-mRNA-1 |
chr2_2 | CDS | 65594970 | 65595572 | 65594970 | ID=Msa0265310-mRNA-1:cds;Parent=Msa0265310-mRNA-1 |
chr2_2 | three_prime_UTR | 65594593 | 65594969 | 65594593 | ID=Msa0265310-mRNA-1:three_prime_utr;Parent=Msa0265310-mRNA-1 |
Gene Sequence |
Protein sequence |