AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1038810


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038810 MtrunA17_Chr7g0273371 98.219 393 7 0 1 393 1 393 0.0 807
Msa1038810 MtrunA17_Chr7g0255151 35.811 148 67 4 160 306 163 283 1.02e-20 93.6
Msa1038810 MtrunA17_Chr1g0211241 39.167 120 66 2 120 236 418 533 1.20e-19 90.9
Msa1038810 MtrunA17_Chr6g0462021 34.014 147 77 2 160 306 150 276 2.03e-19 89.7
Msa1038810 MtrunA17_Chr6g0464751 28.230 209 103 4 124 306 78 265 4.08e-19 88.6
Msa1038810 MtrunA17_Chr3g0131931 32.653 147 79 2 160 306 151 277 9.82e-19 87.4
Msa1038810 MtrunA17_Chr4g0064931 41.748 103 47 2 120 210 325 426 5.20e-18 85.9
Msa1038810 MtrunA17_Chr1g0201631 33.333 147 79 2 160 306 136 263 9.00e-18 84.7
Msa1038810 MtrunA17_Chr1g0211231 41.176 102 49 3 120 210 343 444 1.57e-17 84.3
Msa1038810 MtrunA17_Chr4g0049351 35.714 140 77 3 83 209 272 411 2.77e-17 83.6
Msa1038810 MtrunA17_Chr7g0251761 33.103 145 77 2 162 306 152 276 2.27e-16 80.5
Msa1038810 MtrunA17_Chr1g0199411 33.858 127 78 3 120 240 55 181 3.66e-16 78.2
Msa1038810 MtrunA17_Chr4g0009911 30.323 155 83 4 86 223 23 169 2.20e-15 76.3
Msa1038810 MtrunA17_Chr7g0255161 29.936 157 75 3 160 306 90 221 9.39e-14 72.0
Msa1038810 MtrunA17_Chr5g0406311 31.469 143 71 4 162 304 170 285 4.22e-13 70.1
Msa1038810 MtrunA17_Chr5g0418141 59.091 44 18 0 162 205 181 224 2.10e-12 68.6
Msa1038810 MtrunA17_Chr4g0042821 50.000 54 27 0 162 215 181 234 2.17e-12 68.6
Msa1038810 MtrunA17_Chr1g0193941 37.255 102 49 4 127 217 114 211 2.55e-12 68.2
Msa1038810 MtrunA17_Chr7g0276121 34.066 91 44 2 127 201 76 166 6.89e-12 65.9
Msa1038810 MtrunA17_Chr4g0037991 30.233 129 81 3 162 283 171 297 5.84e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1038810 AT3G04970.1 65.195 385 125 3 1 379 1 382 0.0 527
Msa1038810 AT3G04970.2 73.616 307 81 0 1 307 1 307 2.17e-176 494
Msa1038810 AT3G04970.3 63.390 295 99 3 91 379 4 295 5.51e-137 394
Msa1038810 AT5G50020.3 28.464 267 138 6 117 359 71 308 7.94e-21 94.0
Msa1038810 AT5G50020.2 28.464 267 138 6 117 359 101 338 1.24e-20 93.6
Msa1038810 AT2G14255.1 41.121 107 53 2 123 219 316 422 4.54e-20 92.4
Msa1038810 AT5G41060.3 29.703 202 102 4 124 305 24 205 5.76e-20 90.5
Msa1038810 AT5G41060.4 29.703 202 102 4 124 305 24 205 5.76e-20 90.5
Msa1038810 AT5G41060.2 29.557 203 103 4 124 306 76 258 8.78e-20 90.5
Msa1038810 AT5G41060.1 29.703 202 102 4 124 305 91 272 9.86e-20 90.5
Msa1038810 AT3G26935.1 30.732 205 100 5 124 306 91 275 1.49e-19 90.5
Msa1038810 AT4G24630.1 34.694 147 76 2 160 306 136 262 1.10e-18 87.4
Msa1038810 AT3G48760.1 30.180 222 108 5 112 306 83 284 9.29e-18 85.1
Msa1038810 AT3G56930.1 34.014 147 77 2 160 306 146 272 3.39e-17 83.6
Msa1038810 AT5G50020.1 27.341 267 134 7 117 359 71 301 2.03e-16 80.9
Msa1038810 AT5G05070.1 26.818 220 108 4 115 306 99 293 2.78e-16 80.5
Msa1038810 AT3G56920.1 34.014 147 73 3 160 306 142 264 4.36e-16 79.3
Msa1038810 AT5G20350.1 36.800 125 58 3 117 229 317 432 1.19e-15 79.3
Msa1038810 AT2G40990.1 30.612 147 79 2 160 306 160 283 1.35e-15 78.2
Msa1038810 AT3G09320.1 34.507 142 67 4 162 301 99 216 3.60e-14 72.8
Msa1038810 AT1G69420.1 54.386 57 25 1 162 217 165 221 8.09e-14 73.6
Msa1038810 AT1G69420.2 54.386 57 25 1 162 217 165 221 8.09e-14 73.6
Msa1038810 AT5G04270.1 33.333 90 60 0 134 223 66 155 1.76e-13 70.5
Msa1038810 AT4G00840.2 38.824 85 43 3 127 203 71 154 5.98e-13 68.2
Msa1038810 AT4G00840.1 32.143 140 73 6 82 203 19 154 1.44e-12 68.2
Msa1038810 AT3G51390.2 40.984 61 36 0 162 222 159 219 1.20e-11 65.9
Msa1038810 AT3G51390.1 40.984 61 36 0 162 222 164 224 1.21e-11 65.9
Msa1038810 AT4G01730.1 28.977 176 104 7 127 292 116 280 1.69e-11 66.2

Find 101 sgRNAs with CRISPR-Local

Find 505 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAAAATTAATATCACATTTC+TGG 0.096180 7_1:+75799112 None:intergenic
ATGGAATTGAAAATTCATTT+TGG 0.153553 7_1:-75800292 Msa1038810:CDS
AAGGTTTCTTGCACAATATT+TGG 0.154742 7_1:-75799320 Msa1038810:CDS
CTTAACTTTGCAGTTTATTA+TGG 0.173681 7_1:-75800311 Msa1038810:intron
TGGCTTTCACAATGATTTAT+AGG 0.186947 7_1:+75799132 None:intergenic
AAGAATAATGTTTACAATAA+AGG 0.202965 7_1:-75799339 Msa1038810:CDS
TATTATCATGCAGTGGTTAT+TGG 0.211095 7_1:-75800162 Msa1038810:intron
ATGAAAGTGCCTTCGAAAAT+TGG 0.220315 7_1:+75805996 None:intergenic
TCGTCCCAATCCTCTCTTAC+AGG 0.291503 7_1:-75805750 Msa1038810:intron
TCCTAAAATGCGTTTCCTTT+TGG 0.294286 7_1:-75799228 Msa1038810:three_prime_UTR
TTGACCAGCTTTACTGATCC+TGG 0.302736 7_1:-75804333 Msa1038810:CDS
ATTATCATGCAGTGGTTATT+GGG 0.310919 7_1:-75800161 Msa1038810:intron
GGCTTTCACAATGATTTATA+GGG 0.318359 7_1:+75799133 None:intergenic
AAAGTTGTCTATATTCTAAC+AGG 0.323299 7_1:-75800411 Msa1038810:intron
AGGTTTCTTGCACAATATTT+GGG 0.355157 7_1:-75799319 Msa1038810:CDS
TGGAGCCATATCTCTGAATA+AGG 0.355834 7_1:+75798711 None:intergenic
AAGAAGAATCTGAGTGTTGT+AGG 0.368816 7_1:+75800136 None:intergenic
ATTCACTATTTCCTCACTTT+CGG 0.379491 7_1:-75805966 Msa1038810:CDS
CTATTAAAGGTCTTGGTAGC+TGG 0.380467 7_1:-75799205 Msa1038810:three_prime_UTR
TAAATAGTATCCAGGGATAT+AGG 0.387946 7_1:+75804505 None:intergenic
CATTTCCTTCTATGTATGTA+TGG 0.394359 7_1:-75800480 Msa1038810:CDS
CCATGGATTGGTGACAGCTT+TGG 0.396604 7_1:-75806048 Msa1038810:CDS
TACTGATCCTGGGACAATAA+AGG 0.405997 7_1:-75804322 Msa1038810:CDS
TAGTTGCACTTAAATTTGAA+TGG 0.407365 7_1:-75799181 Msa1038810:three_prime_UTR
GAGAAACACTCGATATTTCA+TGG 0.410575 7_1:-75803936 Msa1038810:CDS
GTAAACCTTATTCAGAGATA+TGG 0.411254 7_1:-75798716 Msa1038810:three_prime_UTR
CATGTAGTCTTGCCACTTGA+AGG 0.417053 7_1:+75799512 None:intergenic
TTCTCAGCCTTTATTGTCCC+AGG 0.429320 7_1:+75804315 None:intergenic
GCAATTGTTGGGATGCTGTT+AGG 0.437281 7_1:-75800101 Msa1038810:CDS
TCTCTTTCCTTTGCGGTCGA+TGG 0.443739 7_1:-75806019 Msa1038810:CDS
AGCTTCTTCGCAGCTGCTGT+TGG 0.443853 7_1:-75804372 Msa1038810:CDS
ATGTATGGAACAGTTCTCAT+AGG 0.449403 7_1:-75800465 Msa1038810:CDS
TCTTCCTTTGCCTATATCCC+TGG 0.452747 7_1:-75804515 Msa1038810:CDS
AAGGGGTGGTAGTGCTAGAA+TGG 0.455560 7_1:-75798794 Msa1038810:three_prime_UTR
ATGCTGTTAGGCGGATTCTT+CGG 0.458907 7_1:-75800089 Msa1038810:CDS
CTTCAAGTGGCAAGACTACA+TGG 0.460027 7_1:-75799511 Msa1038810:CDS
GAAACCTGTAAGAGAGGATT+GGG 0.467880 7_1:+75805746 None:intergenic
TTTAGCTCCCCATGTTGTAC+AGG 0.468240 7_1:-75800267 Msa1038810:intron
AATCGTTGTCAAGCAACAAA+TGG 0.469650 7_1:-75799407 Msa1038810:CDS
TTGAGTCTATTGAATTGAAT+TGG 0.471872 7_1:-75806102 None:intergenic
GTTGTGATCTCTTTCCTTTG+CGG 0.475078 7_1:-75806026 Msa1038810:CDS
AGTTGCACTTAAATTTGAAT+GGG 0.475690 7_1:-75799180 Msa1038810:three_prime_UTR
TGAAACCTGTAAGAGAGGAT+TGG 0.477635 7_1:+75805745 None:intergenic
ACTTGCAGAATAATTGCATA+GGG 0.478657 7_1:-75803961 Msa1038810:intron
GTTATTGGTATGCCATGGAT+TGG 0.482314 7_1:-75806060 Msa1038810:CDS
CTGTTCCATACATACATAGA+AGG 0.484200 7_1:+75800475 None:intergenic
TGTAGAAAGTACCTCATTAG+TGG 0.485997 7_1:+75800034 None:intergenic
GTTGCACTTAAATAGTATCC+AGG 0.487943 7_1:+75804497 None:intergenic
GGTTTGTTATTGGTATGCCA+TGG 0.488441 7_1:-75806065 Msa1038810:CDS
TCATATTAGCAAAAGTAGAA+AGG 0.491478 7_1:-75798987 Msa1038810:three_prime_UTR
CATTAGTGGTAGTGTTACTA+AGG 0.495405 7_1:+75800048 None:intergenic
TTATTTCCCCTCTCTCTACA+AGG 0.510172 7_1:-75799293 Msa1038810:CDS
TTGAATTGAATTGGTAGTGA+TGG 0.510985 7_1:-75806093 Msa1038810:exon
TGACCAGCTTTACTGATCCT+GGG 0.517218 7_1:-75804332 Msa1038810:CDS
CTGCAATGCTTTGATCTAGC+AGG 0.517826 7_1:+75804132 None:intergenic
GAGAAAGTTAAAAGAAGCGC+AGG 0.522389 7_1:-75799481 Msa1038810:CDS
CAAGACCTTTAATAGCCAAA+AGG 0.522910 7_1:+75799213 None:intergenic
GGCATGTCTCTCTACTGTTT+AGG 0.526455 7_1:-75799159 Msa1038810:three_prime_UTR
AAGATCACCTCTGGAGGATG+TGG 0.526947 7_1:-75799370 Msa1038810:CDS
TTTATTTATATTAGAAGAAG+GGG 0.537248 7_1:-75798811 Msa1038810:three_prime_UTR
CTCATAGGTTTAATTCTCGC+AGG 0.542159 7_1:-75800450 Msa1038810:CDS
TCTTGTGTCTGCGGATGTGT+TGG 0.543989 7_1:-75799025 Msa1038810:three_prime_UTR
TGAATTGAATTGGTAGTGAT+GGG 0.546475 7_1:-75806092 Msa1038810:exon
TTCAACAGAAAGAACAGCAT+TGG 0.550937 7_1:+75805787 None:intergenic
GGTGGTAGTGCTAGAATGGT+AGG 0.552181 7_1:-75798790 Msa1038810:three_prime_UTR
AATCGTAAGCGCCGAAAGTG+AGG 0.553005 7_1:+75805955 None:intergenic
ATAGGCAAAGGAAGAGTTGA+CGG 0.558591 7_1:+75804523 None:intergenic
TGTCCCAGGATCAGTAAAGC+TGG 0.563242 7_1:+75804329 None:intergenic
TACTTGCAGAATAATTGCAT+AGG 0.565761 7_1:-75803962 Msa1038810:intron
CTGTATTGCAGACCTTCAAG+TGG 0.570061 7_1:-75799524 Msa1038810:intron
TACTAAGGCAAAGCTTTGCA+TGG 0.571822 7_1:+75800063 None:intergenic
ATTTGTAATTGTCTTCCTTG+CGG 0.572127 7_1:-75798751 Msa1038810:three_prime_UTR
GAAATTGAAACCTGTAAGAG+AGG 0.576988 7_1:+75805740 None:intergenic
AAAACCTCACCTGTACAACA+TGG 0.578089 7_1:+75800258 None:intergenic
TTTGCTAATATGAAACAGTA+CGG 0.579676 7_1:+75798997 None:intergenic
CCAAAGCTGTCACCAATCCA+TGG 0.587050 7_1:+75806048 None:intergenic
TGACCATCACTGTGGATGGA+TGG 0.596777 7_1:-75804082 Msa1038810:intron
AGGACTGCCTTGTAGAGAGA+GGG 0.597622 7_1:+75799286 None:intergenic
TAGTAACACTACCACTAATG+AGG 0.600625 7_1:-75800045 Msa1038810:intron
AGTGGCAAGACTACATGGAC+TGG 0.601667 7_1:-75799506 Msa1038810:CDS
GATTTGACCATCACTGTGGA+TGG 0.605648 7_1:-75804086 Msa1038810:CDS
AATTGAATTGGTAGTGATGG+GGG 0.605936 7_1:-75806090 Msa1038810:exon
TTGCACTTAAATAGTATCCA+GGG 0.606733 7_1:+75804498 None:intergenic
TAACCATCCATCCACAGTGA+TGG 0.615375 7_1:+75804079 None:intergenic
GCGCTAAAACAAAGTATCAG+TGG 0.615716 7_1:-75799447 Msa1038810:CDS
GTATCCAGGGATATAGGCAA+AGG 0.616666 7_1:+75804511 None:intergenic
ATTTATATTAGAAGAAGGGG+TGG 0.624949 7_1:-75798808 Msa1038810:three_prime_UTR
ACAATAACTGATAATGTCAG+TGG 0.624954 7_1:-75798894 Msa1038810:three_prime_UTR
TTTCTTGCACAATATTTGGG+AGG 0.625047 7_1:-75799316 Msa1038810:CDS
AAGGACTGCCTTGTAGAGAG+AGG 0.625945 7_1:+75799285 None:intergenic
AAACCTCACCTGTACAACAT+GGG 0.629986 7_1:+75800259 None:intergenic
AACCTCACCTGTACAACATG+GGG 0.636619 7_1:+75800260 None:intergenic
CTAGAATGGTAGGATCATGA+AGG 0.639864 7_1:-75798780 Msa1038810:three_prime_UTR
CTTGCAGAATAATTGCATAG+GGG 0.645521 7_1:-75803960 Msa1038810:intron
AAATTGGCCATCGACCGCAA+AGG 0.653455 7_1:+75806012 None:intergenic
ATTGTTGGGATGCTGTTAGG+CGG 0.658661 7_1:-75800098 Msa1038810:CDS
GAATTGAATTGGTAGTGATG+GGG 0.660408 7_1:-75806091 Msa1038810:exon
GGACTGCCTTGTAGAGAGAG+GGG 0.664907 7_1:+75799287 None:intergenic
TACTCATTGATAATTCCGCA+AGG 0.675295 7_1:+75798736 None:intergenic
ACAACTACCACATCCTCCAG+AGG 0.699566 7_1:+75799363 None:intergenic
GCACGATTTGACCATCACTG+TGG 0.771092 7_1:-75804090 Msa1038810:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAAAAAAATTAAAA+AGG + chr7_1:75803609-75803628 None:intergenic 0.0%
!! AAGTATGTAAATTTAAATAT+AGG - chr7_1:75799240-75799259 Msa1038810:exon 10.0%
!! TATAAAAATAATCTGAAAAT+AGG + chr7_1:75799939-75799958 None:intergenic 10.0%
!!! TTAGTAAAATCTAAAATAAA+CGG + chr7_1:75800811-75800830 None:intergenic 10.0%
!!! TTTTTATTTATATTAGAAGA+AGG - chr7_1:75805989-75806008 Msa1038810:CDS 10.0%
!!! TTTTATTTATATTAGAAGAA+GGG - chr7_1:75805990-75806009 Msa1038810:CDS 10.0%
!!! TAAAAAGGGTATTTTAATAA+GGG + chr7_1:75799376-75799395 None:intergenic 15.0%
!!! TTAAAAAGGGTATTTTAATA+AGG + chr7_1:75799377-75799396 None:intergenic 15.0%
!!! TTTTCTCAAATTATTATTAC+TGG + chr7_1:75799593-75799612 None:intergenic 15.0%
!!! TATTTATTTTCACATATTGT+TGG - chr7_1:75799748-75799767 Msa1038810:intron 15.0%
!!! ATTTATTTTCACATATTGTT+GGG - chr7_1:75799749-75799768 Msa1038810:intron 15.0%
!! GAAAAAATGATATTATCATA+AGG + chr7_1:75800538-75800557 None:intergenic 15.0%
!! TTCATAAAACTTACTATTTA+AGG + chr7_1:75801115-75801134 None:intergenic 15.0%
!! CTTTAGTATAAATAAGAAAT+GGG + chr7_1:75801434-75801453 None:intergenic 15.0%
!! ACTTTAGTATAAATAAGAAA+TGG + chr7_1:75801435-75801454 None:intergenic 15.0%
!! AAAACTAAAGTAAAAAGATA+AGG + chr7_1:75801625-75801644 None:intergenic 15.0%
!!! TTATCTTTTTACTTTAGTTT+TGG - chr7_1:75801624-75801643 Msa1038810:intron 15.0%
!! AAAAATAAAAGTAAAAACTG+AGG - chr7_1:75802540-75802559 Msa1038810:intron 15.0%
!! AAAATAAAAGTAAAAACTGA+GGG - chr7_1:75802541-75802560 Msa1038810:intron 15.0%
!!! TATTTTTTATGAAGTAGAAA+TGG - chr7_1:75803634-75803653 Msa1038810:intron 15.0%
!!! ATTTTTTATGAAGTAGAAAT+GGG - chr7_1:75803635-75803654 Msa1038810:intron 15.0%
!! TAAGTAAAAACACAATTTAT+GGG + chr7_1:75803768-75803787 None:intergenic 15.0%
!! TTAAGTAAAAACACAATTTA+TGG + chr7_1:75803769-75803788 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr7_1:75803948-75803967 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr7_1:75803972-75803991 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr7_1:75803971-75803990 Msa1038810:intron 15.0%
!! TAAGTAAATTCTAGTAAATT+AGG - chr7_1:75804812-75804831 Msa1038810:intron 15.0%
!! AAACAAAACAAAAATATGTA+TGG - chr7_1:75804960-75804979 Msa1038810:intron 15.0%
!! AAGAATAATGTTTACAATAA+AGG - chr7_1:75805463-75805482 Msa1038810:intron 15.0%
!! TAAAATTAATATCACATTTC+TGG + chr7_1:75805693-75805712 None:intergenic 15.0%
!!! TGTGATATTAATTTTATTGA+AGG - chr7_1:75805697-75805716 Msa1038810:intron 15.0%
!! TTTATTTATATTAGAAGAAG+GGG - chr7_1:75805991-75806010 Msa1038810:CDS 15.0%
!! CAATTGTGATCAATTTAAAT+TGG - chr7_1:75799114-75799133 Msa1038810:three_prime_UTR 20.0%
!! TGTATTCTAAATCTTAAGAT+CGG - chr7_1:75799143-75799162 Msa1038810:three_prime_UTR 20.0%
!! GAAGTAAATAAATTGATTGA+TGG + chr7_1:75799187-75799206 None:intergenic 20.0%
!!! ATCAATTGTCTTGATTTTAA+TGG - chr7_1:75799324-75799343 Msa1038810:CDS 20.0%
!!! ATTAAAATACCCTTTTTAAG+TGG - chr7_1:75799378-75799397 Msa1038810:CDS 20.0%
!! TTAACTATTCCACTTAAAAA+GGG + chr7_1:75799390-75799409 None:intergenic 20.0%
!!! AATGAATAAGAGTATAATAG+TGG - chr7_1:75799424-75799443 Msa1038810:CDS 20.0%
!!! ATGAATAAGAGTATAATAGT+GGG - chr7_1:75799425-75799444 Msa1038810:CDS 20.0%
!! CATAGATATATTTACTAAGT+AGG + chr7_1:75799533-75799552 None:intergenic 20.0%
!! CAAATTATTATTACTGGATA+CGG + chr7_1:75799587-75799606 None:intergenic 20.0%
!!! ATTATTTTTATAAGCTCTCT+AGG - chr7_1:75799947-75799966 Msa1038810:intron 20.0%
!! TTTCTTATAACAAATTCATG+AGG + chr7_1:75800143-75800162 None:intergenic 20.0%
!!! TTGAAATTTTCCTTCTTTAT+AGG - chr7_1:75800753-75800772 Msa1038810:intron 20.0%
!!! TGAAATTTTCCTTCTTTATA+GGG - chr7_1:75800754-75800773 Msa1038810:intron 20.0%
!!! CGAAATTTGATAATTTTACA+GGG - chr7_1:75801391-75801410 Msa1038810:intron 20.0%
!!! AAATGGGTTTAATAAGTAAA+TGG + chr7_1:75801418-75801437 None:intergenic 20.0%
!! ATCTAACTTCTTCATAAAAT+AGG - chr7_1:75801574-75801593 Msa1038810:intron 20.0%
!! GATAATATAATGTATTCAGT+GGG + chr7_1:75802695-75802714 None:intergenic 20.0%
!! AGATAATATAATGTATTCAG+TGG + chr7_1:75802696-75802715 None:intergenic 20.0%
!! AAATTAATTATCACCTCAAA+AGG + chr7_1:75802850-75802869 None:intergenic 20.0%
!! TACAATTTCATTATCTTTGA+AGG + chr7_1:75803434-75803453 None:intergenic 20.0%
!!! TTTTTTATGAAGTAGAAATG+GGG - chr7_1:75803636-75803655 Msa1038810:intron 20.0%
!! AAGTAAAAACACAATTTATG+GGG + chr7_1:75803767-75803786 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr7_1:75803884-75803903 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr7_1:75803962-75803981 Msa1038810:intron 20.0%
!!! TTTAGTACTACAATTTTTAG+TGG - chr7_1:75804204-75804223 Msa1038810:intron 20.0%
!! GAAAAAATCACAAATAAGAA+TGG + chr7_1:75804290-75804309 None:intergenic 20.0%
!!! ATGGAATTGAAAATTCATTT+TGG - chr7_1:75804510-75804529 Msa1038810:CDS 20.0%
!!! TGGAATTGAAAATTCATTTT+GGG - chr7_1:75804511-75804530 Msa1038810:CDS 20.0%
!!! TTTTTGTTTTGAATGAACAA+AGG + chr7_1:75804867-75804886 None:intergenic 20.0%
!! TTAGTTGAGTTAAATATGTA+TGG - chr7_1:75804925-75804944 Msa1038810:intron 20.0%
!!! TAGCATTTTCTTACAAATAA+CGG + chr7_1:75804998-75805017 None:intergenic 20.0%
!!! TTTTGCTTATTTCAAAGTAA+AGG - chr7_1:75805875-75805894 Msa1038810:intron 20.0%
!! ACATACTTGAAGTACTAAAT+AGG + chr7_1:75799228-75799247 None:intergenic 25.0%
! CTTAACTATTCCACTTAAAA+AGG + chr7_1:75799391-75799410 None:intergenic 25.0%
! GGAATTATAGAAATAGCTTA+TGG - chr7_1:75799903-75799922 Msa1038810:intron 25.0%
! AAATAATCTGAAAATAGGCT+AGG + chr7_1:75799934-75799953 None:intergenic 25.0%
!! ATTAAGTTGTTTATCCAAAC+AGG - chr7_1:75800096-75800115 Msa1038810:CDS 25.0%
!! TTAAGTTGTTTATCCAAACA+GGG - chr7_1:75800097-75800116 Msa1038810:CDS 25.0%
!! TCAAGAAAAGAGTACAATAA+CGG + chr7_1:75800354-75800373 None:intergenic 25.0%
!! ATTTCATGGCTTTTCTTTTA+TGG - chr7_1:75800880-75800899 Msa1038810:intron 25.0%
!!! ATAAGTTTTGTAACAGAAAG+TGG - chr7_1:75800937-75800956 Msa1038810:intron 25.0%
! TAGTTGTTTAATTGTGTACT+GGG + chr7_1:75801041-75801060 None:intergenic 25.0%
! TTAGTTGTTTAATTGTGTAC+TGG + chr7_1:75801042-75801061 None:intergenic 25.0%
! AATTTGTGTATTCAATGCAT+TGG - chr7_1:75801135-75801154 Msa1038810:intron 25.0%
!! ATGTTTTTCGTCACTAATTT+TGG + chr7_1:75801327-75801346 None:intergenic 25.0%
!!! AACTTGGTGAAAATTTTTAG+AGG - chr7_1:75801359-75801378 Msa1038810:intron 25.0%
!!! ACTTGGTGAAAATTTTTAGA+GGG - chr7_1:75801360-75801379 Msa1038810:intron 25.0%
!!! GCGAAATTTGATAATTTTAC+AGG - chr7_1:75801390-75801409 Msa1038810:intron 25.0%
! AGTAAAAAGATAAGGACTTA+GGG + chr7_1:75801617-75801636 None:intergenic 25.0%
! AAGTAAAAAGATAAGGACTT+AGG + chr7_1:75801618-75801637 None:intergenic 25.0%
!!! TAGAAAAGTTGGTAGAAAAT+AGG - chr7_1:75802226-75802245 Msa1038810:intron 25.0%
!! TTTTCTAATGGTTTCTCTAA+TGG + chr7_1:75802360-75802379 None:intergenic 25.0%
! AACCATTAGAAAAGATTTAG+AGG - chr7_1:75802367-75802386 Msa1038810:intron 25.0%
! GTTCTATCAAAAACCATATT+TGG + chr7_1:75802407-75802426 None:intergenic 25.0%
! GTTGAGTGGTTTAAATAATA+GGG + chr7_1:75802726-75802745 None:intergenic 25.0%
! AGTTGAGTGGTTTAAATAAT+AGG + chr7_1:75802727-75802746 None:intergenic 25.0%
! ATTTAGAAAATGTAGTTGAG+TGG + chr7_1:75802740-75802759 None:intergenic 25.0%
!! TACTCTCCAAAACTTTAAAA+TGG - chr7_1:75802768-75802787 Msa1038810:intron 25.0%
!!! ACTCTCCAAAACTTTAAAAT+GGG - chr7_1:75802769-75802788 Msa1038810:intron 25.0%
!!! TGTATATTGTAGAGTTTTGT+GGG + chr7_1:75802796-75802815 None:intergenic 25.0%
!! ATGTATATTGTAGAGTTTTG+TGG + chr7_1:75802797-75802816 None:intergenic 25.0%
!! TTAATATATAGCACCTTTTG+AGG - chr7_1:75802834-75802853 Msa1038810:intron 25.0%
!!! TTTTTGGCAATGACATATTA+AGG + chr7_1:75802934-75802953 None:intergenic 25.0%
! AACATCATAACAGGATATTT+CGG + chr7_1:75803043-75803062 None:intergenic 25.0%
! AAATATCCTGTTATGATGTT+GGG - chr7_1:75803043-75803062 Msa1038810:intron 25.0%
! TTAAAAAGGTTCTCCATAAA+AGG + chr7_1:75803595-75803614 None:intergenic 25.0%
!! CATCTAAAATTGAATTTCAC+AGG + chr7_1:75803732-75803751 None:intergenic 25.0%
!! CATAGTACTACAAATTTTAG+TGG - chr7_1:75804129-75804148 Msa1038810:CDS 25.0%
! AATGAAAATGCATACTGTAT+TGG + chr7_1:75804185-75804204 None:intergenic 25.0%
! AATGAAAATGCATACTGTAT+TGG + chr7_1:75804185-75804204 None:intergenic 25.0%
!! ACAGTATGCATTTTCATTTT+AGG - chr7_1:75804187-75804206 Msa1038810:intron 25.0%
! AAAGTTGTCTATATTCTAAC+AGG - chr7_1:75804391-75804410 Msa1038810:intron 25.0%
! CTTAACTTTGCAGTTTATTA+TGG - chr7_1:75804491-75804510 Msa1038810:CDS 25.0%
!! ATAGTTTTCATTGCAATTGT+TGG - chr7_1:75804689-75804708 Msa1038810:intron 25.0%
!! TAGTTTTCATTGCAATTGTT+GGG - chr7_1:75804690-75804709 Msa1038810:intron 25.0%
! TTACTTACATAGTCATTTCA+AGG + chr7_1:75804799-75804818 None:intergenic 25.0%
! GTAAATTCTAGTAAATTAGG+AGG - chr7_1:75804815-75804834 Msa1038810:intron 25.0%
!! ATAATACATGATTTGGAAGT+TGG - chr7_1:75805021-75805040 Msa1038810:intron 25.0%
!!! TTTCAACTTTGTTTTCGTAA+AGG + chr7_1:75805539-75805558 None:intergenic 25.0%
! TAGTTGCACTTAAATTTGAA+TGG - chr7_1:75805621-75805640 Msa1038810:intron 25.0%
! AGTTGCACTTAAATTTGAAT+GGG - chr7_1:75805622-75805641 Msa1038810:intron 25.0%
!! TAATTTTATTGAAGGAGTTC+AGG - chr7_1:75805705-75805724 Msa1038810:intron 25.0%
! TTTGCTAATATGAAACAGTA+CGG + chr7_1:75805808-75805827 None:intergenic 25.0%
! TCATATTAGCAAAAGTAGAA+AGG - chr7_1:75805815-75805834 Msa1038810:CDS 25.0%
!! TTGAATTGAATTGGTAGTGA+TGG - chr7_1:75798709-75798728 Msa1038810:three_prime_UTR 30.0%
!! TGAATTGAATTGGTAGTGAT+GGG - chr7_1:75798710-75798729 Msa1038810:three_prime_UTR 30.0%
ATTCACTATTTCCTCACTTT+CGG - chr7_1:75798836-75798855 Msa1038810:three_prime_UTR 30.0%
!! CACAAACCTATATTTTGAGA+CGG + chr7_1:75799285-75799304 None:intergenic 30.0%
GGTTGAATAATCCATCAATT+TGG + chr7_1:75799807-75799826 None:intergenic 30.0%
!! TAAACACTTTCTGAAACTGT+TGG - chr7_1:75799882-75799901 Msa1038810:intron 30.0%
GATAGCTTATGAAAACAACT+TGG - chr7_1:75799969-75799988 Msa1038810:intron 30.0%
TAAATAGTATCCAGGGATAT+AGG + chr7_1:75800300-75800319 None:intergenic 30.0%
TTGCACTTAAATAGTATCCA+GGG + chr7_1:75800307-75800326 None:intergenic 30.0%
TTTGCTGCTAGTGTTAAATT+TGG - chr7_1:75800596-75800615 Msa1038810:intron 30.0%
TACTTGCAGAATAATTGCAT+AGG - chr7_1:75800840-75800859 Msa1038810:intron 30.0%
ACTTGCAGAATAATTGCATA+GGG - chr7_1:75800841-75800860 Msa1038810:intron 30.0%
AGTTGTTTAATTGTGTACTG+GGG + chr7_1:75801040-75801059 None:intergenic 30.0%
!! CTCTGGGATAAATAAGAAAA+GGG + chr7_1:75801246-75801265 None:intergenic 30.0%
!! ACTCTGGGATAAATAAGAAA+AGG + chr7_1:75801247-75801266 None:intergenic 30.0%
TTAGTGACGAAAAACATTTG+AGG - chr7_1:75801330-75801349 Msa1038810:intron 30.0%
TAGTGACGAAAAACATTTGA+GGG - chr7_1:75801331-75801350 Msa1038810:intron 30.0%
AAGAGTCCAAAATCAAAATG+TGG + chr7_1:75801505-75801524 None:intergenic 30.0%
ATAAAATAGGACTACACCAA+GGG - chr7_1:75801587-75801606 Msa1038810:intron 30.0%
!!! TTTAGTTTTGGATGTACTGA+CGG - chr7_1:75801636-75801655 Msa1038810:intron 30.0%
GAAGTTACATTCCATATACT+CGG + chr7_1:75801809-75801828 None:intergenic 30.0%
TTGAATACGATGATGTACAT+CGG + chr7_1:75801947-75801966 None:intergenic 30.0%
! TCTACCAACTTTTCTACTAT+AGG + chr7_1:75802222-75802241 None:intergenic 30.0%
TTCTTACAACGGCATATTTA+CGG + chr7_1:75802283-75802302 None:intergenic 30.0%
TTGATCTACTCTTCTTACAA+CGG + chr7_1:75802294-75802313 None:intergenic 30.0%
TGTAAGAAGAGTAGATCAAA+TGG - chr7_1:75802295-75802314 Msa1038810:intron 30.0%
! GTTTCTCTAATGGTTTTCTT+AGG + chr7_1:75802350-75802369 None:intergenic 30.0%
! GACCTCTAAATCTTTTCTAA+TGG + chr7_1:75802372-75802391 None:intergenic 30.0%
AACTTCTTCATAAAAGAAGC+TGG - chr7_1:75802504-75802523 Msa1038810:intron 30.0%
ACTTCTTCATAAAAGAAGCT+GGG - chr7_1:75802505-75802524 Msa1038810:intron 30.0%
AATAGTATTACCCAAGGTAA+AGG + chr7_1:75802572-75802591 None:intergenic 30.0%
ATTTATACCACCTATATGAG+TGG + chr7_1:75802668-75802687 None:intergenic 30.0%
ACTCATATAGGTGGTATAAA+TGG - chr7_1:75802667-75802686 Msa1038810:intron 30.0%
CTCATATAGGTGGTATAAAT+GGG - chr7_1:75802668-75802687 Msa1038810:intron 30.0%
!!! TAAAGTTTTGGAGAGTAGTA+TGG + chr7_1:75802765-75802784 None:intergenic 30.0%
!!! GGTAAGGATATTTGGTTTTT+TGG + chr7_1:75802950-75802969 None:intergenic 30.0%
GAAATATCCTGTTATGATGT+TGG - chr7_1:75803042-75803061 Msa1038810:intron 30.0%
AAAGATTTAAAGGTTGTTGC+AGG + chr7_1:75803094-75803113 None:intergenic 30.0%
! GTTGCAATTGGGATTTTATT+CGG - chr7_1:75803297-75803316 Msa1038810:intron 30.0%
! TTGCAATTGGGATTTTATTC+GGG - chr7_1:75803298-75803317 Msa1038810:intron 30.0%
ATCATAACCCACACAAAATT+TGG - chr7_1:75803565-75803584 Msa1038810:intron 30.0%
!!! AAAATTTGGTGCACCTTTTA+TGG - chr7_1:75803579-75803598 Msa1038810:intron 30.0%
! TAGTGTGCAGAGTATTTAAT+TGG + chr7_1:75803922-75803941 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr7_1:75804053-75804072 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr7_1:75804054-75804073 Msa1038810:intron 30.0%
CATTTCCTTCTATGTATGTA+TGG - chr7_1:75804322-75804341 Msa1038810:CDS 30.0%
! TCTTCCTATTTTCCATTTTG+TGG - chr7_1:75804605-75804624 Msa1038810:intron 30.0%
TTGACCACAAAATGGAAAAT+AGG + chr7_1:75804612-75804631 None:intergenic 30.0%
ACATATCATTGACCACAAAA+TGG + chr7_1:75804620-75804639 None:intergenic 30.0%
GATATGTTATTATCATGCAG+TGG - chr7_1:75804633-75804652 Msa1038810:intron 30.0%
TATTATCATGCAGTGGTTAT+TGG - chr7_1:75804640-75804659 Msa1038810:intron 30.0%
ATTATCATGCAGTGGTTATT+GGG - chr7_1:75804641-75804660 Msa1038810:intron 30.0%
ATGAGATCACTGATGTTATA+GGG + chr7_1:75804891-75804910 None:intergenic 30.0%
AATGAGATCACTGATGTTAT+AGG + chr7_1:75804892-75804911 None:intergenic 30.0%
GCTAAGCATAATACATGATT+TGG - chr7_1:75805014-75805033 Msa1038810:intron 30.0%
! TCTGCATCTTGTTTATTTAG+AGG - chr7_1:75805185-75805204 Msa1038810:intron 30.0%
! CTGCATCTTGTTTATTTAGA+GGG - chr7_1:75805186-75805205 Msa1038810:intron 30.0%
! TGCATCTTGTTTATTTAGAG+GGG - chr7_1:75805187-75805206 Msa1038810:intron 30.0%
AAGGTTTCTTGCACAATATT+TGG - chr7_1:75805482-75805501 Msa1038810:intron 30.0%
AGGTTTCTTGCACAATATTT+GGG - chr7_1:75805483-75805502 Msa1038810:intron 30.0%
GGCTTTCACAATGATTTATA+GGG + chr7_1:75805672-75805691 None:intergenic 30.0%
TGGCTTTCACAATGATTTAT+AGG + chr7_1:75805673-75805692 None:intergenic 30.0%
!!! TTTTTTAGTTCTTGTGTCTG+CGG - chr7_1:75805768-75805787 Msa1038810:CDS 30.0%
! AGCAAAATCAATCGTTTTAC+AGG + chr7_1:75805862-75805881 None:intergenic 30.0%
! ACAATAACTGATAATGTCAG+TGG - chr7_1:75805908-75805927 Msa1038810:intron 30.0%
ATTTATATTAGAAGAAGGGG+TGG - chr7_1:75805994-75806013 Msa1038810:CDS 30.0%
ATTTGTAATTGTCTTCCTTG+CGG - chr7_1:75806051-75806070 Msa1038810:CDS 30.0%
GTAAACCTTATTCAGAGATA+TGG - chr7_1:75806086-75806105 Msa1038810:exon 30.0%
!! GAATTGAATTGGTAGTGATG+GGG - chr7_1:75798711-75798730 Msa1038810:three_prime_UTR 35.0%
!! AATTGAATTGGTAGTGATGG+GGG - chr7_1:75798712-75798731 Msa1038810:three_prime_UTR 35.0%
!! ATGAAAGTGCCTTCGAAAAT+TGG + chr7_1:75798809-75798828 None:intergenic 35.0%
TTCAACAGAAAGAACAGCAT+TGG + chr7_1:75799018-75799037 None:intergenic 35.0%
GAAATTGAAACCTGTAAGAG+AGG + chr7_1:75799065-75799084 None:intergenic 35.0%
!!! AACCTATATTTTGAGACGGA+GGG + chr7_1:75799281-75799300 None:intergenic 35.0%
!!! AAACCTATATTTTGAGACGG+AGG + chr7_1:75799282-75799301 None:intergenic 35.0%
!! AGGTTTGTGCACTATTTCTA+AGG - chr7_1:75799296-75799315 Msa1038810:CDS 35.0%
ACATATTGTTGGGACTGAAT+TGG - chr7_1:75799759-75799778 Msa1038810:intron 35.0%
TGGAGAGAGAATGATACTTT+AGG - chr7_1:75799779-75799798 Msa1038810:intron 35.0%
GGAGAGAGAATGATACTTTA+GGG - chr7_1:75799780-75799799 Msa1038810:intron 35.0%
! TACTTTAGGGACCAAATTGA+TGG - chr7_1:75799793-75799812 Msa1038810:intron 35.0%
ATTCAACCAAATTGTGACTC+AGG - chr7_1:75799819-75799838 Msa1038810:intron 35.0%
TTCAACCAAATTGTGACTCA+GGG - chr7_1:75799820-75799839 Msa1038810:intron 35.0%
! CATTTTGTGATGTTCTCTGT+TGG - chr7_1:75800187-75800206 Msa1038810:intron 35.0%
GTTGCACTTAAATAGTATCC+AGG + chr7_1:75800308-75800327 None:intergenic 35.0%
TTTAAGTGCAACTCACAAGT+AGG - chr7_1:75800316-75800335 Msa1038810:intron 35.0%
TTAAGTGCAACTCACAAGTA+GGG - chr7_1:75800317-75800336 Msa1038810:intron 35.0%
!!! TCACTTTGGAATTTTGCAAG+TGG + chr7_1:75800575-75800594 None:intergenic 35.0%
CTTAAGTGACCCTATAAAGA+AGG + chr7_1:75800766-75800785 None:intergenic 35.0%
CTTGCAGAATAATTGCATAG+GGG - chr7_1:75800842-75800861 Msa1038810:intron 35.0%
GAGAAACACTCGATATTTCA+TGG - chr7_1:75800866-75800885 Msa1038810:intron 35.0%
TTTATGGTGAGCTCTATATG+TGG - chr7_1:75800896-75800915 Msa1038810:intron 35.0%
! TCTTATTTATCCCAGAGTAC+AGG - chr7_1:75801249-75801268 Msa1038810:intron 35.0%
AGTCAACTCCATTTAACAGT+TGG - chr7_1:75801299-75801318 Msa1038810:intron 35.0%
GTCAACTCCATTTAACAGTT+GGG - chr7_1:75801300-75801319 Msa1038810:intron 35.0%
! TTTTGGTCCCAACTGTTAAA+TGG + chr7_1:75801310-75801329 None:intergenic 35.0%
ACATTTGAGGGACTAAAACT+TGG - chr7_1:75801343-75801362 Msa1038810:intron 35.0%
! CGGAAAACAAGTCTAAAATG+TGG + chr7_1:75801465-75801484 None:intergenic 35.0%
!!! TCATGGCCACATTTTGATTT+TGG - chr7_1:75801496-75801515 Msa1038810:intron 35.0%
CATAAAATAGGACTACACCA+AGG - chr7_1:75801586-75801605 Msa1038810:intron 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr7_1:75801682-75801701 None:intergenic 35.0%
TGGAATGTAACTTCAGCAAA+AGG - chr7_1:75801815-75801834 Msa1038810:intron 35.0%
!! TTCTCCGTCATTTTGTACTA+TGG + chr7_1:75801917-75801936 None:intergenic 35.0%
TACATCATCGTATTCAAGCT+GGG - chr7_1:75801950-75801969 Msa1038810:intron 35.0%
! AAAGTACCACTTAAGCTGAA+AGG - chr7_1:75802015-75802034 Msa1038810:intron 35.0%
AACTTTCCTTTCAGCTTAAG+TGG + chr7_1:75802024-75802043 None:intergenic 35.0%
AGCTGAAAGGAAAGTTCTAT+TGG - chr7_1:75802028-75802047 Msa1038810:intron 35.0%
AGCACCTATAGTAGAAAAGT+TGG - chr7_1:75802215-75802234 Msa1038810:intron 35.0%
TGGTAGAAAATAGGCTTACA+TGG - chr7_1:75802235-75802254 Msa1038810:intron 35.0%
GAAAATAGGCTTACATGGTT+TGG - chr7_1:75802240-75802259 Msa1038810:intron 35.0%
TCTTACAACGGCATATTTAC+GGG + chr7_1:75802282-75802301 None:intergenic 35.0%
AAGAAGAGTAGATCAAATGG+AGG - chr7_1:75802298-75802317 Msa1038810:intron 35.0%
AGATTTAGAGGTCAATGAGT+TGG - chr7_1:75802379-75802398 Msa1038810:intron 35.0%
! CAATGAGTTGGATCCAAATA+TGG - chr7_1:75802391-75802410 Msa1038810:intron 35.0%
CATCTCAATAGTATTACCCA+AGG + chr7_1:75802578-75802597 None:intergenic 35.0%
!!! TGGGACCCATTTTAAAGTTT+TGG + chr7_1:75802777-75802796 None:intergenic 35.0%
CTCAGCAAAGAACAAAGATA+CGG - chr7_1:75802886-75802905 Msa1038810:intron 35.0%
AAATGAAGAGTTACTGTTCG+TGG + chr7_1:75803173-75803192 None:intergenic 35.0%
ACAAGATCTGACTGTAAACT+TGG - chr7_1:75803244-75803263 Msa1038810:intron 35.0%
! TCCTCGATTTCCTTTTTGTT+GGG - chr7_1:75803274-75803293 Msa1038810:intron 35.0%
! TTTTTGTTGGGGTTGCAATT+GGG - chr7_1:75803286-75803305 Msa1038810:intron 35.0%
GAGAAGTTGTAACGTAATGT+GGG - chr7_1:75803341-75803360 Msa1038810:intron 35.0%
! TTCATTATCTTTGAAGGCTG+AGG + chr7_1:75803428-75803447 None:intergenic 35.0%
! CTAATATGACTGGTTATAGC+AGG + chr7_1:75803664-75803683 None:intergenic 35.0%
CTGCTATAACCAGTCATATT+AGG - chr7_1:75803662-75803681 Msa1038810:intron 35.0%
CTATAACCAGTCATATTAGG+AGG - chr7_1:75803665-75803684 Msa1038810:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr7_1:75803817-75803836 None:intergenic 35.0%
! GTGCAGAGTATTTAATTGGA+GGG + chr7_1:75803918-75803937 None:intergenic 35.0%
! TGTGCAGAGTATTTAATTGG+AGG + chr7_1:75803919-75803938 None:intergenic 35.0%
!!! GTGATTTTTTCGTGTCTTGT+AGG - chr7_1:75804299-75804318 Msa1038810:CDS 35.0%
CTGTTCCATACATACATAGA+AGG + chr7_1:75804330-75804349 None:intergenic 35.0%
ATGTATGGAACAGTTCTCAT+AGG - chr7_1:75804337-75804356 Msa1038810:CDS 35.0%
! AAGAAGAATCTGAGTGTTGT+AGG + chr7_1:75804669-75804688 None:intergenic 35.0%
! CATTAGTGGTAGTGTTACTA+AGG + chr7_1:75804757-75804776 None:intergenic 35.0%
TAGTAACACTACCACTAATG+AGG - chr7_1:75804757-75804776 Msa1038810:intron 35.0%
!! TGTAGAAAGTACCTCATTAG+TGG + chr7_1:75804771-75804790 None:intergenic 35.0%
! AATGAGGTACTTTCTACATC+TGG - chr7_1:75804773-75804792 Msa1038810:intron 35.0%
TGAATGAACAAAGGAGAGTA+TGG + chr7_1:75804858-75804877 None:intergenic 35.0%
CATCAGTGATCTCATTACTA+TGG - chr7_1:75804896-75804915 Msa1038810:intron 35.0%
!! CTTACAAATAACGGACATAG+CGG + chr7_1:75804989-75805008 None:intergenic 35.0%
TGACAAAATGACATCTTTGC+TGG - chr7_1:75805078-75805097 Msa1038810:intron 35.0%
ATTCTCATCAAATTGCAGCA+GGG + chr7_1:75805120-75805139 None:intergenic 35.0%
AATTCTCATCAAATTGCAGC+AGG + chr7_1:75805121-75805140 None:intergenic 35.0%
TAACTAGTGCTTCTGATAAG+CGG + chr7_1:75805218-75805237 None:intergenic 35.0%
AATCGTTGTCAAGCAACAAA+TGG - chr7_1:75805395-75805414 Msa1038810:intron 35.0%
!!! ATTTTTTCGAAGATCACCTC+TGG - chr7_1:75805423-75805442 Msa1038810:intron 35.0%
TTTCTTGCACAATATTTGGG+AGG - chr7_1:75805486-75805505 Msa1038810:intron 35.0%
!! ATTTTAGGAGCATACTCAGT+TGG + chr7_1:75805563-75805582 None:intergenic 35.0%
! TCCTAAAATGCGTTTCCTTT+TGG - chr7_1:75805574-75805593 Msa1038810:intron 35.0%
!! CGTTTCCTTTTGGCTATTAA+AGG - chr7_1:75805584-75805603 Msa1038810:intron 35.0%
CAAGACCTTTAATAGCCAAA+AGG + chr7_1:75805592-75805611 None:intergenic 35.0%
!! CTTTTGGCTATTAAAGGTCT+TGG - chr7_1:75805590-75805609 Msa1038810:intron 35.0%
! TACTCATTGATAATTCCGCA+AGG + chr7_1:75806069-75806088 None:intergenic 35.0%
!! GGTTTGTTATTGGTATGCCA+TGG - chr7_1:75798737-75798756 Msa1038810:three_prime_UTR 40.0%
GTTATTGGTATGCCATGGAT+TGG - chr7_1:75798742-75798761 Msa1038810:three_prime_UTR 40.0%
GTTGTGATCTCTTTCCTTTG+CGG - chr7_1:75798776-75798795 Msa1038810:three_prime_UTR 40.0%
GAGAGAGTTAGTTACAGTAC+AGG + chr7_1:75798877-75798896 None:intergenic 40.0%
!! CGTTTTATTGGCGCTGTTTT+TGG - chr7_1:75798981-75799000 Msa1038810:three_prime_UTR 40.0%
GAAACCTGTAAGAGAGGATT+GGG + chr7_1:75799059-75799078 None:intergenic 40.0%
TGAAACCTGTAAGAGAGGAT+TGG + chr7_1:75799060-75799079 None:intergenic 40.0%
! AGGTATAATGCCCCTGTTTT+GGG + chr7_1:75800123-75800142 None:intergenic 40.0%
ATAGGCAAAGGAAGAGTTGA+CGG + chr7_1:75800282-75800301 None:intergenic 40.0%
CCTAAGGTCTAACAGAATTC+AGG + chr7_1:75800404-75800423 None:intergenic 40.0%
CCTGAATTCTGTTAGACCTT+AGG - chr7_1:75800401-75800420 Msa1038810:intron 40.0%
TACTGATCCTGGGACAATAA+AGG - chr7_1:75800480-75800499 Msa1038810:CDS 40.0%
!! TAATCCTTAAAGAGTGCCAC+AGG - chr7_1:75801202-75801221 Msa1038810:intron 40.0%
!! AATCCTTAAAGAGTGCCACA+GGG - chr7_1:75801203-75801222 Msa1038810:intron 40.0%
TTTCCGCATGATTCAGATCA+TGG - chr7_1:75801479-75801498 Msa1038810:intron 40.0%
!!! TAGTCTTGCTTTTTGAGTCG+AGG - chr7_1:75801707-75801726 Msa1038810:intron 40.0%
!!! AGTCTTGCTTTTTGAGTCGA+GGG - chr7_1:75801708-75801727 Msa1038810:intron 40.0%
TAGAAGCAAGACCGAGTATA+TGG - chr7_1:75801795-75801814 Msa1038810:intron 40.0%
AACTTCAGCAAAAGGAGAAG+TGG - chr7_1:75801823-75801842 Msa1038810:intron 40.0%
ACTTCAGCAAAAGGAGAAGT+GGG - chr7_1:75801824-75801843 Msa1038810:intron 40.0%
ATATCATACCCCAAGTTACG+CGG - chr7_1:75801875-75801894 Msa1038810:intron 40.0%
ACATCTAAACCGCGTAACTT+GGG + chr7_1:75801887-75801906 None:intergenic 40.0%
TTACGCGGTTTAGATGTCTT+GGG - chr7_1:75801890-75801909 Msa1038810:intron 40.0%
GGGTCCATAGTACAAAATGA+CGG - chr7_1:75801910-75801929 Msa1038810:intron 40.0%
GTACATCATCGTATTCAAGC+TGG - chr7_1:75801949-75801968 Msa1038810:intron 40.0%
ACCGACAATGTTGTATGGTA+CGG - chr7_1:75802062-75802081 Msa1038810:intron 40.0%
TCCGTACCATACAACATTGT+CGG + chr7_1:75802066-75802085 None:intergenic 40.0%
AGACTAGACAGGATAGGATT+AGG - chr7_1:75802163-75802182 Msa1038810:intron 40.0%
!! ATGGAGGAGAGTGTTAAAAG+AGG - chr7_1:75802314-75802333 Msa1038810:intron 40.0%
!! GAGAGTGTTAAAAGAGGTAG+AGG - chr7_1:75802320-75802339 Msa1038810:intron 40.0%
TGAGGGAATTTCCTTTACCT+TGG - chr7_1:75802558-75802577 Msa1038810:intron 40.0%
GAGGGAATTTCCTTTACCTT+GGG - chr7_1:75802559-75802578 Msa1038810:intron 40.0%
CTATATGAGTGGTATGGATG+TGG + chr7_1:75802657-75802676 None:intergenic 40.0%
CACATCCATACCACTCATAT+AGG - chr7_1:75802655-75802674 Msa1038810:intron 40.0%
ATCCATACCACTCATATAGG+TGG - chr7_1:75802658-75802677 Msa1038810:intron 40.0%
TACCACCTATATGAGTGGTA+TGG + chr7_1:75802663-75802682 None:intergenic 40.0%
ACGGTAGTAATGCATTGCTA+CGG - chr7_1:75802905-75802924 Msa1038810:intron 40.0%
GTCAGAGTGGTAAGGATATT+TGG + chr7_1:75802958-75802977 None:intergenic 40.0%
! CTTTGGGAAAAGTGATACCA+TGG - chr7_1:75802985-75803004 Msa1038810:intron 40.0%
!! GTCTCTAAGAGCACCATTAT+CGG + chr7_1:75803021-75803040 None:intergenic 40.0%
TCAGAACCCAACATCATAAC+AGG + chr7_1:75803052-75803071 None:intergenic 40.0%
TCTGACTGTAAACTTGGACT+TGG - chr7_1:75803250-75803269 Msa1038810:intron 40.0%
CTGACTGTAAACTTGGACTT+GGG - chr7_1:75803251-75803270 Msa1038810:intron 40.0%
! GTCCTCGATTTCCTTTTTGT+TGG - chr7_1:75803273-75803292 Msa1038810:intron 40.0%
! CCTCGATTTCCTTTTTGTTG+GGG - chr7_1:75803275-75803294 Msa1038810:intron 40.0%
CAATTGCAACCCCAACAAAA+AGG + chr7_1:75803287-75803306 None:intergenic 40.0%
! CTTTTTGTTGGGGTTGCAAT+TGG - chr7_1:75803285-75803304 Msa1038810:intron 40.0%
TATTCGGGTCGTTTATGTGA+TGG - chr7_1:75803313-75803332 Msa1038810:intron 40.0%
ATTCGGGTCGTTTATGTGAT+GGG - chr7_1:75803314-75803333 Msa1038810:intron 40.0%
GGAGAAGTTGTAACGTAATG+TGG - chr7_1:75803340-75803359 Msa1038810:intron 40.0%
!! CGTAATGTGGGAGTTGTTTT+AGG - chr7_1:75803353-75803372 Msa1038810:intron 40.0%
!!! TGGGAGTTGTTTTAGGAGAT+GGG - chr7_1:75803360-75803379 Msa1038810:intron 40.0%
TATGATTGCAATGGAGTTGG+TGG + chr7_1:75803551-75803570 None:intergenic 40.0%
GGTTATGATTGCAATGGAGT+TGG + chr7_1:75803554-75803573 None:intergenic 40.0%
! TGTGTGGGTTATGATTGCAA+TGG + chr7_1:75803560-75803579 None:intergenic 40.0%
! AGGTGCACCAAATTTTGTGT+GGG + chr7_1:75803575-75803594 None:intergenic 40.0%
! AAGGTGCACCAAATTTTGTG+TGG + chr7_1:75803576-75803595 None:intergenic 40.0%
TCATATTAGGAGGTCCACAT+TGG - chr7_1:75803675-75803694 Msa1038810:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr7_1:75804058-75804077 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr7_1:75804058-75804077 Msa1038810:intron 40.0%
!! TTTGAAACGGAGGGAGTATT+AGG - chr7_1:75804067-75804086 Msa1038810:intron 40.0%
CTCATAGGTTTAATTCTCGC+AGG - chr7_1:75804352-75804371 Msa1038810:CDS 40.0%
AAACCTCACCTGTACAACAT+GGG + chr7_1:75804546-75804565 None:intergenic 40.0%
AAAACCTCACCTGTACAACA+TGG + chr7_1:75804547-75804566 None:intergenic 40.0%
TACTAAGGCAAAGCTTTGCA+TGG + chr7_1:75804742-75804761 None:intergenic 40.0%
AATTGCAGCAGGGTTTAAAC+TGG + chr7_1:75805110-75805129 None:intergenic 40.0%
CACTAGTTATACCACGAACA+TGG - chr7_1:75805229-75805248 Msa1038810:intron 40.0%
ATGGAACTCAATGCAGCTAA+TGG - chr7_1:75805248-75805267 Msa1038810:intron 40.0%
! GAGAAAGTTAAAAGAAGCGC+AGG - chr7_1:75805321-75805340 Msa1038810:intron 40.0%
! GCGCTAAAACAAAGTATCAG+TGG - chr7_1:75805355-75805374 Msa1038810:intron 40.0%
TTATTTCCCCTCTCTCTACA+AGG - chr7_1:75805509-75805528 Msa1038810:intron 40.0%
! GCCAAAAGGAAACGCATTTT+AGG + chr7_1:75805578-75805597 None:intergenic 40.0%
! CTATTAAAGGTCTTGGTAGC+TGG - chr7_1:75805597-75805616 Msa1038810:intron 40.0%
CTAGAATGGTAGGATCATGA+AGG - chr7_1:75806022-75806041 Msa1038810:CDS 40.0%
TGGAGCCATATCTCTGAATA+AGG + chr7_1:75806094-75806113 None:intergenic 40.0%
!! GATGGGGGTAGGTTTGTTAT+TGG - chr7_1:75798727-75798746 Msa1038810:three_prime_UTR 45.0%
AGAGAGAGAGAGTGAGATTG+AGG + chr7_1:75798942-75798961 None:intergenic 45.0%
CTCTCTGTAATCTCTCTCTC+AGG - chr7_1:75798958-75798977 Msa1038810:three_prime_UTR 45.0%
! CTCTCTCTCAGGCGTTTTAT+TGG - chr7_1:75798969-75798988 Msa1038810:three_prime_UTR 45.0%
AACACGACACTCCTTTGATC+AGG - chr7_1:75799660-75799679 Msa1038810:intron 45.0%
ACACGACACTCCTTTGATCA+GGG - chr7_1:75799661-75799680 Msa1038810:intron 45.0%
CAGAACCCTGAGTCACAATT+TGG + chr7_1:75799828-75799847 None:intergenic 45.0%
TTGTGACTCAGGGTTCTGTT+TGG - chr7_1:75799830-75799849 Msa1038810:intron 45.0%
! GAGGTATAATGCCCCTGTTT+TGG + chr7_1:75800124-75800143 None:intergenic 45.0%
TCTTCCTTTGCCTATATCCC+TGG - chr7_1:75800287-75800306 Msa1038810:CDS 45.0%
GTATCCAGGGATATAGGCAA+AGG + chr7_1:75800294-75800313 None:intergenic 45.0%
AGAGTACAATAACGGCGTGT+CGG + chr7_1:75800346-75800365 None:intergenic 45.0%
CGAAGAAGCTTGTGTACCTA+AGG + chr7_1:75800420-75800439 None:intergenic 45.0%
TTGACCAGCTTTACTGATCC+TGG - chr7_1:75800469-75800488 Msa1038810:CDS 45.0%
TGACCAGCTTTACTGATCCT+GGG - chr7_1:75800470-75800489 Msa1038810:CDS 45.0%
TTCTCAGCCTTTATTGTCCC+AGG + chr7_1:75800490-75800509 None:intergenic 45.0%
CACTAGCAGCAAACTCACTT+TGG + chr7_1:75800589-75800608 None:intergenic 45.0%
CTGCAATGCTTTGATCTAGC+AGG + chr7_1:75800673-75800692 None:intergenic 45.0%
GATTTGACCATCACTGTGGA+TGG - chr7_1:75800716-75800735 Msa1038810:intron 45.0%
TAACCATCCATCCACAGTGA+TGG + chr7_1:75800726-75800745 None:intergenic 45.0%
!! AAGGTGCTTAAAGAGTGTCC+CGG + chr7_1:75801096-75801115 None:intergenic 45.0%
!! ATCCTTAAAGAGTGCCACAG+GGG - chr7_1:75801204-75801223 Msa1038810:intron 45.0%
TGGCCATGATCTGAATCATG+CGG + chr7_1:75801485-75801504 None:intergenic 45.0%
!! TACATCTCGGTGCTAACTCT+TGG + chr7_1:75801669-75801688 None:intergenic 45.0%
TCTACCTTGGAGGTGAAAGT+TGG - chr7_1:75801847-75801866 Msa1038810:intron 45.0%
ATCTCCAACTTTCACCTCCA+AGG + chr7_1:75801854-75801873 None:intergenic 45.0%
CATCTAAACCGCGTAACTTG+GGG + chr7_1:75801886-75801905 None:intergenic 45.0%
GACATCTAAACCGCGTAACT+TGG + chr7_1:75801888-75801907 None:intergenic 45.0%
GTTACGCGGTTTAGATGTCT+TGG - chr7_1:75801889-75801908 Msa1038810:intron 45.0%
ATCATCGTATTCAAGCTGGG+TGG - chr7_1:75801953-75801972 Msa1038810:intron 45.0%
TTCAAGCTGGGTGGTTGAAA+TGG - chr7_1:75801962-75801981 Msa1038810:intron 45.0%
TTGAAATGGAGAAGAGCCTC+AGG - chr7_1:75801976-75801995 Msa1038810:intron 45.0%
CTTATCGCACAAAACACCTG+AGG + chr7_1:75801995-75802014 None:intergenic 45.0%
GTCAGACCGACAATGTTGTA+TGG - chr7_1:75802057-75802076 Msa1038810:intron 45.0%
TGTTGTATGGTACGGAGTGT+TGG - chr7_1:75802070-75802089 Msa1038810:intron 45.0%
! GTTGTATGGTACGGAGTGTT+GGG - chr7_1:75802071-75802090 Msa1038810:intron 45.0%
CGCTTACTTTACTCTCGTGT+TGG + chr7_1:75802107-75802126 None:intergenic 45.0%
CGAGAGTAAAGTAAGCGTAG+CGG - chr7_1:75802110-75802129 Msa1038810:intron 45.0%
GATGAGTGGTAAGACTAGAC+AGG - chr7_1:75802152-75802171 Msa1038810:intron 45.0%
GTGGTAAGACTAGACAGGAT+AGG - chr7_1:75802157-75802176 Msa1038810:intron 45.0%
TGACACCATTAGAGAGAGAG+TGG - chr7_1:75802188-75802207 Msa1038810:intron 45.0%
GACACCATTAGAGAGAGAGT+GGG - chr7_1:75802189-75802208 Msa1038810:intron 45.0%
ACACCATTAGAGAGAGAGTG+GGG - chr7_1:75802190-75802209 Msa1038810:intron 45.0%
! AAGCCTTATCCCACTAAGTG+GGG + chr7_1:75802460-75802479 None:intergenic 45.0%
! CAAGCCTTATCCCACTAAGT+GGG + chr7_1:75802461-75802480 None:intergenic 45.0%
TGACGATCACACAAAACACG+AGG - chr7_1:75802596-75802615 Msa1038810:intron 45.0%
TCCTTACCACTCTGACACAA+TGG - chr7_1:75802962-75802981 Msa1038810:intron 45.0%
CACTCTGACACAATGGCTTT+GGG - chr7_1:75802969-75802988 Msa1038810:intron 45.0%
! TTATCGGTTGACTCTTGCCA+TGG + chr7_1:75803005-75803024 None:intergenic 45.0%
TGGCAAGAGTCAACCGATAA+TGG - chr7_1:75803005-75803024 Msa1038810:intron 45.0%
CCCCAACAAAAAGGAAATCG+AGG + chr7_1:75803278-75803297 None:intergenic 45.0%
! GGTCGTTTATGTGATGGGAT+GGG - chr7_1:75803319-75803338 Msa1038810:intron 45.0%
!!! GTGGGAGTTGTTTTAGGAGA+TGG - chr7_1:75803359-75803378 Msa1038810:intron 45.0%
CAAAGTGAACGTGAAGGAGA+GGG + chr7_1:75803494-75803513 None:intergenic 45.0%
ACAAAGTGAACGTGAAGGAG+AGG + chr7_1:75803495-75803514 None:intergenic 45.0%
TGTGGACAAAGTGAACGTGA+AGG + chr7_1:75803500-75803519 None:intergenic 45.0%
TGTGGACCTCCTAATATGAC+TGG + chr7_1:75803674-75803693 None:intergenic 45.0%
TTTCACAGGAGCCCCTAATT+CGG + chr7_1:75803718-75803737 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr7_1:75804057-75804076 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr7_1:75804057-75804076 Msa1038810:intron 45.0%
! TTAGTGGCTGATTTCTGCTC+TGG - chr7_1:75804145-75804164 Msa1038810:intron 45.0%
! TTAGTGGCTGATTTCTGCTC+TGG - chr7_1:75804145-75804164 Msa1038810:intron 45.0%
! TTTAGCTCCCCATGTTGTAC+AGG - chr7_1:75804535-75804554 Msa1038810:CDS 45.0%
AACCTCACCTGTACAACATG+GGG + chr7_1:75804545-75804564 None:intergenic 45.0%
GCAATTGTTGGGATGCTGTT+AGG - chr7_1:75804701-75804720 Msa1038810:intron 45.0%
ATTGTTGGGATGCTGTTAGG+CGG - chr7_1:75804704-75804723 Msa1038810:intron 45.0%
! ATGCTGTTAGGCGGATTCTT+CGG - chr7_1:75804713-75804732 Msa1038810:intron 45.0%
!! GAGTATGGCTTGCTACTTTC+TGG + chr7_1:75804843-75804862 None:intergenic 45.0%
TGCATTGAGTTCCATGTTCG+TGG + chr7_1:75805243-75805262 None:intergenic 45.0%
CTGTATTGCAGACCTTCAAG+TGG - chr7_1:75805278-75805297 Msa1038810:intron 45.0%
! CATGTAGTCTTGCCACTTGA+AGG + chr7_1:75805293-75805312 None:intergenic 45.0%
CTTCAAGTGGCAAGACTACA+TGG - chr7_1:75805291-75805310 Msa1038810:intron 45.0%
! TTTTCGAAGATCACCTCTGG+AGG - chr7_1:75805426-75805445 Msa1038810:intron 45.0%
GGCATGTCTCTCTACTGTTT+AGG - chr7_1:75805643-75805662 Msa1038810:intron 45.0%
!!! TTTTTATAATAAAGATTTAA+AGG + chr7_1:75803104-75803123 None:intergenic 5.0%
!! GAATTGGTAGTGATGGGGGT+AGG - chr7_1:75798716-75798735 Msa1038810:three_prime_UTR 50.0%
CCAAAGCTGTCACCAATCCA+TGG + chr7_1:75798757-75798776 None:intergenic 50.0%
!! CCATGGATTGGTGACAGCTT+TGG - chr7_1:75798754-75798773 Msa1038810:three_prime_UTR 50.0%
TCTCTTTCCTTTGCGGTCGA+TGG - chr7_1:75798783-75798802 Msa1038810:three_prime_UTR 50.0%
AAATTGGCCATCGACCGCAA+AGG + chr7_1:75798793-75798812 None:intergenic 50.0%
! GGTCGATGGCCAATTTTCGA+AGG - chr7_1:75798797-75798816 Msa1038810:three_prime_UTR 50.0%
!! AATCGTAAGCGCCGAAAGTG+AGG + chr7_1:75798850-75798869 None:intergenic 50.0%
TCGTCCCAATCCTCTCTTAC+AGG - chr7_1:75799052-75799071 Msa1038810:three_prime_UTR 50.0%
CGCCCTCCGTCTCAAAATAT+AGG - chr7_1:75799276-75799295 Msa1038810:CDS 50.0%
CACGACACTCCTTTGATCAG+GGG - chr7_1:75799662-75799681 Msa1038810:intron 50.0%
! GCACTGATACCCCTGATCAA+AGG + chr7_1:75799674-75799693 None:intergenic 50.0%
!! CAGGGGTATCAGTGCTACAA+AGG - chr7_1:75799679-75799698 Msa1038810:intron 50.0%
ATCCAAACAGGGCCCAAAAC+AGG - chr7_1:75800108-75800127 Msa1038810:CDS 50.0%
TCCAAACAGGGCCCAAAACA+GGG - chr7_1:75800109-75800128 Msa1038810:CDS 50.0%
GAGTACAATAACGGCGTGTC+GGG + chr7_1:75800345-75800364 None:intergenic 50.0%
TGTCCCAGGATCAGTAAAGC+TGG + chr7_1:75800476-75800495 None:intergenic 50.0%
GCACGATTTGACCATCACTG+TGG - chr7_1:75800712-75800731 Msa1038810:intron 50.0%
TGACCATCACTGTGGATGGA+TGG - chr7_1:75800720-75800739 Msa1038810:intron 50.0%
TTACCATATAGCAGTGCCCC+CGG - chr7_1:75801074-75801093 Msa1038810:intron 50.0%
!! AGGTGCTTAAAGAGTGTCCC+GGG + chr7_1:75801095-75801114 None:intergenic 50.0%
!! TCCTTAAAGAGTGCCACAGG+GGG - chr7_1:75801205-75801224 Msa1038810:intron 50.0%
ATCCCAGAGTACAGGTACAC+AGG - chr7_1:75801257-75801276 Msa1038810:intron 50.0%
TCCCAGAGTACAGGTACACA+GGG - chr7_1:75801258-75801277 Msa1038810:intron 50.0%
! GGAGTTGACTGACTCTGACA+TGG + chr7_1:75801289-75801308 None:intergenic 50.0%
AAGGACTTAGGGTTGACCCT+TGG + chr7_1:75801606-75801625 None:intergenic 50.0%
!!! CTTGCTTTTTGAGTCGAGGG+AGG - chr7_1:75801711-75801730 Msa1038810:intron 50.0%
GAGTCGAGGGAGGAGTTAAA+CGG - chr7_1:75801721-75801740 Msa1038810:intron 50.0%
AGTCGAGGGAGGAGTTAAAC+GGG - chr7_1:75801722-75801741 Msa1038810:intron 50.0%
TAAACGGGAGGCTAGAGACT+TGG - chr7_1:75801737-75801756 Msa1038810:intron 50.0%
! AGGCAAGCCTTAGAAGCGTA+TGG - chr7_1:75801760-75801779 Msa1038810:intron 50.0%
ACTCGGTCTTGCTTCTACTC+AGG + chr7_1:75801792-75801811 None:intergenic 50.0%
AAGGAGAAGTGGGTCTACCT+TGG - chr7_1:75801834-75801853 Msa1038810:intron 50.0%
! AAGTAAGCGTAGCGGAGATG+CGG - chr7_1:75802118-75802137 Msa1038810:intron 50.0%
CACCATTAGAGAGAGAGTGG+GGG - chr7_1:75802191-75802210 Msa1038810:intron 50.0%
TACCCCCACTCTCTCTCTAA+TGG + chr7_1:75802196-75802215 None:intergenic 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr7_1:75802456-75802475 None:intergenic 50.0%
! CCAAGCCTTATCCCACTAAG+TGG + chr7_1:75802462-75802481 None:intergenic 50.0%
CCACTTAGTGGGATAAGGCT+TGG - chr7_1:75802459-75802478 Msa1038810:intron 50.0%
GCCATTGTGTCAGAGTGGTA+AGG + chr7_1:75802966-75802985 None:intergenic 50.0%
CCAAAGCCATTGTGTCAGAG+TGG + chr7_1:75802971-75802990 None:intergenic 50.0%
CCACTCTGACACAATGGCTT+TGG - chr7_1:75802968-75802987 Msa1038810:intron 50.0%
! GGGTCGTTTATGTGATGGGA+TGG - chr7_1:75803318-75803337 Msa1038810:intron 50.0%
!! TGGAGTTGGTGGAGATACAG+CGG + chr7_1:75803540-75803559 None:intergenic 50.0%
AGTGGCAAGACTACATGGAC+TGG - chr7_1:75805296-75805315 Msa1038810:intron 50.0%
!!! TTGTTTTAGCGCTGCAGCAC+TGG + chr7_1:75805347-75805366 None:intergenic 50.0%
! AAGATCACCTCTGGAGGATG+TGG - chr7_1:75805432-75805451 Msa1038810:intron 50.0%
ACAACTACCACATCCTCCAG+AGG + chr7_1:75805442-75805461 None:intergenic 50.0%
AGGACTGCCTTGTAGAGAGA+GGG + chr7_1:75805519-75805538 None:intergenic 50.0%
AAGGACTGCCTTGTAGAGAG+AGG + chr7_1:75805520-75805539 None:intergenic 50.0%
TCTTGTGTCTGCGGATGTGT+TGG - chr7_1:75805777-75805796 Msa1038810:CDS 50.0%
! AAGGGGTGGTAGTGCTAGAA+TGG - chr7_1:75806008-75806027 Msa1038810:CDS 50.0%
! GGTGGTAGTGCTAGAATGGT+AGG - chr7_1:75806012-75806031 Msa1038810:CDS 50.0%
CCAAACAGGGCCCAAAACAG+GGG - chr7_1:75800110-75800129 Msa1038810:CDS 55.0%
AGCTTCTTCGCAGCTGCTGT+TGG - chr7_1:75800430-75800449 Msa1038810:CDS 55.0%
TGTGTACTGGGGCAGTCATG+CGG + chr7_1:75801029-75801048 None:intergenic 55.0%
TACCATATAGCAGTGCCCCC+GGG - chr7_1:75801075-75801094 Msa1038810:intron 55.0%
!! GTGCTTAAAGAGTGTCCCGG+GGG + chr7_1:75801093-75801112 None:intergenic 55.0%
!! GGTGCTTAAAGAGTGTCCCG+GGG + chr7_1:75801094-75801113 None:intergenic 55.0%
GCCCTGTGTACCTGTACTCT+GGG + chr7_1:75801262-75801281 None:intergenic 55.0%
TGCCCTGTGTACCTGTACTC+TGG + chr7_1:75801263-75801282 None:intergenic 55.0%
GCGGAAGCCATACGCTTCTA+AGG + chr7_1:75801770-75801789 None:intergenic 55.0%
CGGTCTTGCTTCTACTCAGG+CGG + chr7_1:75801789-75801808 None:intergenic 55.0%
GAGAAGTGGGTCTACCTTGG+AGG - chr7_1:75801837-75801856 Msa1038810:intron 55.0%
!! GTATGGTACGGAGTGTTGGG+CGG - chr7_1:75802074-75802093 Msa1038810:intron 55.0%
CGGATGTTGCGTTGGATGAG+TGG - chr7_1:75802138-75802157 Msa1038810:intron 55.0%
ACTAAGTGGGGTCGGCTACA+TGG + chr7_1:75802448-75802467 None:intergenic 55.0%
ATGTAGCCGACCCCACTTAG+TGG - chr7_1:75802447-75802466 Msa1038810:intron 55.0%
TGTAGCCGACCCCACTTAGT+GGG - chr7_1:75802448-75802467 Msa1038810:intron 55.0%
CGACCCCACTTAGTGGGATA+AGG - chr7_1:75802454-75802473 Msa1038810:intron 55.0%
CTCCCCATGTTGTACAGGTG+AGG - chr7_1:75804540-75804559 Msa1038810:CDS 55.0%
GGACTGCCTTGTAGAGAGAG+GGG + chr7_1:75805518-75805537 None:intergenic 55.0%
!! CCCCTGTTTTGGGCCCTGTT+TGG + chr7_1:75800113-75800132 None:intergenic 60.0%
GGCAGTCATGCGGTAGGACA+AGG + chr7_1:75801019-75801038 None:intergenic 60.0%
TACTGGGGCAGTCATGCGGT+AGG + chr7_1:75801025-75801044 None:intergenic 60.0%
GCCCCCTGTGGCACTCTTTA+AGG + chr7_1:75801209-75801228 None:intergenic 60.0%
TTGCTAACGAGTGCCCCCTG+TGG + chr7_1:75801221-75801240 None:intergenic 60.0%
CGAGGGAGGAGTTAAACGGG+AGG - chr7_1:75801725-75801744 Msa1038810:intron 60.0%
ACGGGAGGCTAGAGACTTGG+AGG - chr7_1:75801740-75801759 Msa1038810:intron 60.0%
CGGAGATGCGGATGTTGCGT+TGG - chr7_1:75802130-75802149 Msa1038810:intron 60.0%
GGTGGAGATACAGCGGACCA+CGG + chr7_1:75803533-75803552 None:intergenic 60.0%
!! GTCCCGGGGGCACTGCTATA+TGG + chr7_1:75801080-75801099 None:intergenic 65.0%
TACAGCGGACCACGGAGGCA+GGG + chr7_1:75803525-75803544 None:intergenic 65.0%
ATACAGCGGACCACGGAGGC+AGG + chr7_1:75803526-75803545 None:intergenic 65.0%
GGAGATACAGCGGACCACGG+AGG + chr7_1:75803530-75803549 None:intergenic 65.0%
GTCCACACTCCCTGCCTCCG+TGG - chr7_1:75803513-75803532 Msa1038810:intron 70.0%
GACCACGGAGGCAGGGAGTG+TGG + chr7_1:75803518-75803537 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 75798708 75806116 75798708 ID=Msa1038810;Name=Msa1038810
chr7_1 mRNA 75798708 75806116 75798708 ID=Msa1038810-mRNA-1;Parent=Msa1038810;Name=Msa1038810-mRNA-1;_AED=0.12;_eAED=0.12;_QI=20|1|1|1|1|1|10|549|393
chr7_1 exon 75798708 75799535 75798708 ID=Msa1038810-mRNA-1:exon:19536;Parent=Msa1038810-mRNA-1
chr7_1 exon 75800046 75800171 75800046 ID=Msa1038810-mRNA-1:exon:19535;Parent=Msa1038810-mRNA-1
chr7_1 exon 75800268 75800320 75800268 ID=Msa1038810-mRNA-1:exon:19534;Parent=Msa1038810-mRNA-1
chr7_1 exon 75800412 75800503 75800412 ID=Msa1038810-mRNA-1:exon:19533;Parent=Msa1038810-mRNA-1
chr7_1 exon 75803923 75803975 75803923 ID=Msa1038810-mRNA-1:exon:19532;Parent=Msa1038810-mRNA-1
chr7_1 exon 75804083 75804155 75804083 ID=Msa1038810-mRNA-1:exon:19531;Parent=Msa1038810-mRNA-1
chr7_1 exon 75804234 75804401 75804234 ID=Msa1038810-mRNA-1:exon:19530;Parent=Msa1038810-mRNA-1
chr7_1 exon 75804491 75804585 75804491 ID=Msa1038810-mRNA-1:exon:19529;Parent=Msa1038810-mRNA-1
chr7_1 exon 75805751 75805844 75805751 ID=Msa1038810-mRNA-1:exon:19528;Parent=Msa1038810-mRNA-1
chr7_1 exon 75805948 75806116 75805948 ID=Msa1038810-mRNA-1:exon:19527;Parent=Msa1038810-mRNA-1
chr7_1 five_prime_UTR 75806097 75806116 75806097 ID=Msa1038810-mRNA-1:five_prime_utr;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75805948 75806096 75805948 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75805751 75805844 75805751 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75804491 75804585 75804491 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75804234 75804401 75804234 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75804083 75804155 75804083 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75803923 75803975 75803923 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75800412 75800503 75800412 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75800268 75800320 75800268 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75800046 75800171 75800046 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 CDS 75799257 75799535 75799257 ID=Msa1038810-mRNA-1:cds;Parent=Msa1038810-mRNA-1
chr7_1 three_prime_UTR 75798708 75799256 75798708 ID=Msa1038810-mRNA-1:three_prime_utr;Parent=Msa1038810-mRNA-1
Gene Sequence

>Msa1038810

ATGGGGGTAGGTTTGTTATTGGTATGCCATGGATTGGTGACAGCTTTGGTTGTGATCTCTTTCCTTTGCGGTCGATGGCCAATTTTCGAAGGCACTTTCATTCAACGCATTCACTATTTCCTCACTTTCGGCGCTTACGATTACTTCCTGCGTTTTATTGGCGCTGTTTTTGGCTCTAAGTGTACCAATGCTGTTCTTTCTGTTGAATATTATTGCTGCGATCGTCCCAATCCTCTCTTACAGATCATATATCTTGTGATAATCAGCTTTACATATTATTTTGCCGTCAACTCTTCCTTTGCCTATATCCCTGGATACTATTTAAGTGCAACTCACAAGTACACAAGCTTCTTCGCAGCTGCTGTTGGAATTCTGCTCTTTCTTTTGACCAGCTTTACTGATCCTGGGACAATAAAGGCTGAGAATGTTTCTCAATATCTTGCTGCTTATCCTTATGATAATATCATTTTTTCAGAGAAAGAATGTTCCACTTGCAAAATTCCAAAACCTGCTAGATCAAAGCATTGCAGCATTTGTGATCGCTGTGTTGCACGATTTGACCATCACTGTGGATGGATGAATAATTGCATAGGGGAGAGAAACACTCGATATTTCATGGCTTTTCTTTTATGGCATTTCCTTCTATGTATGTATGGAACAGTTCTCATAGGTTTAATTCTCGCAGGAAGACTAAAAGAATTAAAAGTTGTCTATATTCTAACAGTTTATTATGGAATTGAAAATTCATTTTGGGATTTAGCTCCCCATGTTGTACAGTGGTTATTGGGATCCTACAACACTCAGATTCTTCTTATAGTTTTCATTGCAATTGTTGGGATGCTGTTAGGCGGATTCTTCGGTTACCATGCAAAGCTTTGCCTTAGTAACACTACCACTAATGAGACCTTCAAGTGGCAAGACTACATGGACTGGCAGAGAAAGTTAAAAGAAGCGCAGGCCAGTGCTGCAGCGCTAAAACAAAGTATCAGTGGAATGAACAGTGAAAAACAATCGTTGTCAAGCAACAAATGGAAAGCATTTTTTCGAAGATCACCTCTGGAGGATGTGGTAGTTGTTAAGAATAATGTTTACAATAAAGGTTTCTTGCACAATATTTGGGAGGTTATTTCCCCTCTCTCTACAAGGCAGTCCTTTACGAAAACAAAGTTGAAATCCAACTGA

Protein sequence

>Msa1038810

MGVGLLLVCHGLVTALVVISFLCGRWPIFEGTFIQRIHYFLTFGAYDYFLRFIGAVFGSKCTNAVLSVEYYCCDRPNPLLQIIYLVIISFTYYFAVNSSFAYIPGYYLSATHKYTSFFAAAVGILLFLLTSFTDPGTIKAENVSQYLAAYPYDNIIFSEKECSTCKIPKPARSKHCSICDRCVARFDHHCGWMNNCIGERNTRYFMAFLLWHFLLCMYGTVLIGLILAGRLKELKVVYILTVYYGIENSFWDLAPHVVQWLLGSYNTQILLIVFIAIVGMLLGGFFGYHAKLCLSNTTTNETFKWQDYMDWQRKLKEAQASAAALKQSISGMNSEKQSLSSNKWKAFFRRSPLEDVVVVKNNVYNKGFLHNIWEVISPLSTRQSFTKTKLKSN*