AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0965490


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0965490 MtrunA17_Chr6g0486061 88.557 201 18 2 1 196 1 201 6.01e-127 363
Msa0965490 MtrunA17_Chr6g0486061 80.645 186 27 2 186 362 2 187 2.90e-104 306
Msa0965490 MtrunA17_Chr6g0486071 80.597 201 34 2 1 196 1 201 1.45e-113 329
Msa0965490 MtrunA17_Chr6g0486071 85.714 182 17 2 190 362 6 187 2.01e-107 313
Msa0965490 MtrunA17_Chr7g0255501 78.495 186 16 4 1 179 1 169 1.00e-93 278
Msa0965490 MtrunA17_Chr7g0255501 70.270 185 27 4 186 359 2 169 3.42e-82 248
Msa0965490 MtrunA17_Chr5g0401581 40.701 371 150 6 1 362 1 310 1.08e-86 265
Msa0965490 MtrunA17_Chr5g0401581 53.535 198 89 2 2 196 127 324 6.83e-67 214
Msa0965490 MtrunA17_Chr5g0393991 57.286 199 82 2 1 196 1 199 1.88e-73 227
Msa0965490 MtrunA17_Chr5g0393991 55.435 184 75 2 186 362 2 185 1.64e-62 199
Msa0965490 MtrunA17_Chr5g0401571 55.556 198 84 2 1 196 1 196 6.68e-68 213
Msa0965490 MtrunA17_Chr5g0401571 54.945 182 66 3 191 362 7 182 2.02e-59 191
Msa0965490 MtrunA17_Chr6g0466791 53.030 198 91 1 1 196 1 198 8.15e-65 205
Msa0965490 MtrunA17_Chr6g0466791 52.514 179 79 1 190 362 6 184 3.30e-57 185
Msa0965490 MtrunA17_Chr7g0256491 40.000 190 110 3 10 196 53 241 2.03e-37 135
Msa0965490 MtrunA17_Chr7g0256491 39.773 176 98 3 194 362 53 227 2.74e-33 124
Msa0965490 MtrunA17_Chr3g0083801 38.462 182 104 4 10 186 29 207 4.45e-30 115
Msa0965490 MtrunA17_Chr3g0083801 37.500 176 102 3 194 362 29 203 3.67e-28 110
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0965490 AT3G22320.1 51.010 198 94 2 2 196 1 198 2.80e-65 206
Msa0965490 AT3G22320.1 49.444 180 84 2 190 362 5 184 2.29e-53 176
Msa0965490 AT5G57980.1 41.414 198 108 4 5 195 5 201 2.09e-43 150
Msa0965490 AT5G57980.1 38.798 183 101 3 191 362 7 189 5.77e-39 138
Msa0965490 AT3G57080.1 39.037 187 110 4 3 186 20 205 3.40e-34 126
Msa0965490 AT3G57080.1 38.636 176 100 4 194 362 27 201 5.45e-31 117
Msa0965490 AT2G41340.1 39.444 180 105 3 10 186 23 201 1.35e-33 124
Msa0965490 AT2G41340.1 39.773 176 98 3 194 362 23 197 1.56e-32 122
Msa0965490 AT3G54490.1 35.135 185 116 3 10 191 38 221 1.20e-25 103
Msa0965490 AT3G54490.1 34.659 176 107 3 194 362 38 212 1.53e-22 95.5
Msa0965490 AT2G41340.2 34.225 187 106 4 194 373 23 199 1.81e-23 97.1
Msa0965490 AT2G41340.2 34.857 175 95 4 10 178 23 184 3.37e-22 93.6
Msa0965490 AT2G41340.3 37.821 156 89 3 194 342 23 177 1.87e-22 94.0
Msa0965490 AT2G41340.3 37.107 159 90 3 10 162 23 177 1.13e-21 91.7

Find 64 sgRNAs with CRISPR-Local

Find 623 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCATGTGTTCGCCGTATT+TGG 0.178722 6_3:-92897161 None:intergenic
GAATGTTGATAATGGGATTT+TGG 0.182720 6_3:+92889008 Msa0965490:CDS
GATCCTGTTGCGAGATATTA+TGG 0.263062 6_3:+92899460 Msa0965490:CDS
GAATGTTGATAATGGGATTA+TGG 0.265855 6_3:+92897312 Msa0965490:CDS
GATCCTGTTGCGAGATATTA+TGG 0.267061 6_3:+92892519 Msa0965490:CDS
CTTGGTGTTAAGATTGTTAG+AGG 0.323964 6_3:+92888961 Msa0965490:intron
AGTTTCTGTCGGATAACATT+TGG 0.355496 6_3:-92888786 None:intergenic
TTGAACGAGAATGTTGATAA+TGG 0.358712 6_3:+92889000 Msa0965490:CDS
TTGAAGGAGAATGTTGATAA+TGG 0.365536 6_3:+92897304 Msa0965490:CDS
AGTTTCTGTCGGATAGCATT+TGG 0.365870 6_3:-92897090 None:intergenic
GGATCCGACGTCAAAATTCT+AGG 0.372876 6_3:-92892501 None:intergenic
TCATGTGTTCGCCGTATTTG+AGG 0.394018 6_3:-92888855 None:intergenic
TGGGTTGTTTCTGTGAGTTT+TGG 0.406142 6_3:-92888899 None:intergenic
TTGTTAGAGGTATTATTACT+AGG 0.414736 6_3:+92897278 Msa0965490:intron
ACACATGAAACGAGAACAAT+TGG 0.418532 6_3:+92888870 Msa0965490:CDS
TTCTCGAGACATGGTGAGTT+CGG 0.435332 6_3:-92888824 None:intergenic
TCTGCGAGTAAAGCTGTTGC+TGG 0.436785 6_3:+92897358 Msa0965490:CDS
AGTCCATAATATCTCGCAAC+AGG 0.442138 6_3:-92892522 None:intergenic
AGTCCATAATATCTCGCAAC+AGG 0.442138 6_3:-92899463 None:intergenic
TGAACGAGAATGTTGATAAT+GGG 0.456181 6_3:+92889001 Msa0965490:CDS
GACAAGTTGTCAGGATTATC+CGG 0.456842 6_3:+92892553 Msa0965490:CDS
TGAAGGAGAATGTTGATAAT+GGG 0.459832 6_3:+92897305 Msa0965490:CDS
TTCTCGAGACATGGTAAGTT+CGG 0.464031 6_3:-92897128 None:intergenic
TTCTCTGATGATGCTAAACT+TGG 0.475053 6_3:+92888943 Msa0965490:CDS
CACAGTGTATTTCTTGAGCA+AGG 0.476320 6_3:-92891192 None:intergenic
GTTGCTGAAATGAGTTCTGT+TGG 0.477137 6_3:+92889069 Msa0965490:CDS
TTCTCTGATAATGCTAAACT+TGG 0.484073 6_3:+92897247 Msa0965490:CDS
TAAGGCGTGGACAAGTTGTC+AGG 0.488439 6_3:+92892544 Msa0965490:CDS
AACATTCTCGTTCAACATCC+TGG 0.498165 6_3:-92888992 None:intergenic
GAAGATTTCATCTCCAAATA+CGG 0.498349 6_3:+92897148 Msa0965490:CDS
TATTATTACTAGGATGTTGA+AGG 0.503440 6_3:+92897288 Msa0965490:CDS
GAAGATTTCATCCTCAAATA+CGG 0.509305 6_3:+92888844 Msa0965490:CDS
TGTCGGATAACATTTGGAGA+AGG 0.521778 6_3:-92888780 None:intergenic
AATAGTTAGAGAGCATAAGC+TGG 0.523167 6_3:-92900300 None:intergenic
TGCCTGCGGTCTCACTTGGC+CGG 0.523972 6_3:-92892572 None:intergenic
GTCGGATAACATTTGGAGAA+GGG 0.526708 6_3:-92888779 None:intergenic
TTGCGAGATATTATGGACTA+AGG 0.534711 6_3:+92892526 Msa0965490:CDS
TTGCGAGATATTATGGACTA+AGG 0.534711 6_3:+92899467 Msa0965490:CDS
GACAGTGTATCTCTTGAGCA+AGG 0.536488 6_3:-92899203 None:intergenic
GTTGCTGGAATGAGTTCAGT+TGG 0.536745 6_3:+92897373 Msa0965490:CDS
CGAACGTGTACCTCCACATC+AGG 0.539250 6_3:+92891145 Msa0965490:CDS
ATAGTTAGAGAGCATAAGCT+GGG 0.540463 6_3:-92900299 None:intergenic
ACACATGAAACGAGAACAGT+TGG 0.541688 6_3:+92897174 Msa0965490:CDS
CAAGGCTTTCTTCTCAGCGT+CGG 0.546747 6_3:-92891174 None:intergenic
CAAGGCTTTCTTCTCAGCGT+CGG 0.546747 6_3:-92899185 None:intergenic
TTCGACAAGGTAGTTTCTGT+CGG 0.552777 6_3:-92888797 None:intergenic
GATGAAATCTTCTCGAGACA+TGG 0.592229 6_3:-92888833 None:intergenic
GGTGCAGGAGGATGAACTGC+TGG 0.593439 6_3:+92899117 Msa0965490:intron
TTAGAGAGCATAAGCTGGGG+AGG 0.598873 6_3:-92900295 None:intergenic
GTCGACGAGGTAGTTTCTGT+CGG 0.601745 6_3:-92897101 None:intergenic
ATACACTGTCAAAGATACTC+AGG 0.601749 6_3:+92899216 Msa0965490:CDS
GGTGCAGGAGGATGAACTGC+TGG 0.602196 6_3:+92891106 Msa0965490:intron
GATGAAATCTTCTCGAGACA+TGG 0.607302 6_3:-92897137 None:intergenic
ATACACTGTGAAAGATACTC+AGG 0.612579 6_3:+92891205 Msa0965490:CDS
AGATATTATGGACTAAGGCG+TGG 0.621762 6_3:+92892531 Msa0965490:CDS
AGATATTATGGACTAAGGCG+TGG 0.621762 6_3:+92899472 Msa0965490:CDS
AACTGCTGGTGAACATAACA+AGG 0.623262 6_3:+92891120 Msa0965490:CDS
GCGTCGGTGAGAACCTGATG+TGG 0.633208 6_3:-92891158 None:intergenic
GCGTCGGTGAGAACCTGATG+TGG 0.633208 6_3:-92899169 None:intergenic
TAAGTTCGGTGTCGTCGACG+AGG 0.652373 6_3:-92897114 None:intergenic
TGAGTTCGGTGTCTTCGACA+AGG 0.665015 6_3:-92888810 None:intergenic
TCGGTGAGAACCTGATGTGG+AGG 0.676021 6_3:-92891155 None:intergenic
TCGGTGAGAACCTGATGTGG+AGG 0.676021 6_3:-92899166 None:intergenic
TAGTTAGAGAGCATAAGCTG+GGG 0.677436 6_3:-92900298 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTAACAAATTATTATCA+GGG - chr6_3:92889265-92889284 None:intergenic 10.0%
!!! TATTTTAACAAATTATTATC+AGG - chr6_3:92889266-92889285 None:intergenic 10.0%
!! AAAAAATTTCAAATTATTAG+CGG + chr6_3:92889405-92889424 Msa0965490:intron 10.0%
!!! AACAATTTTCATATTATTAT+CGG - chr6_3:92889962-92889981 None:intergenic 10.0%
!! AAAATATGTATAATAAATAG+GGG - chr6_3:92893389-92893408 None:intergenic 10.0%
!! GAAAAATATGTATAATAAAT+AGG - chr6_3:92893391-92893410 None:intergenic 10.0%
!!! TAATAACATTTTTTTTTTGA+AGG + chr6_3:92893684-92893703 Msa0965490:intron 10.0%
!! AAAATAAATTGTGAATTTAT+TGG + chr6_3:92895431-92895450 Msa0965490:intron 10.0%
!!! ATTTAGATTTTTTTTTTTGA+AGG - chr6_3:92896734-92896753 None:intergenic 10.0%
!!! ATTTTTTAAAACTAAATGAT+TGG + chr6_3:92896773-92896792 Msa0965490:intron 10.0%
!!! TATTTATTTTTAATTTCTTC+TGG + chr6_3:92899261-92899280 Msa0965490:intron 10.0%
!! ATTACAATAACAAAAATAAA+GGG - chr6_3:92899619-92899638 None:intergenic 10.0%
!!! TTTATTTTTGTTATTGTAAT+GGG + chr6_3:92899619-92899638 Msa0965490:intron 10.0%
!! GTTAATAATTTAATTCAATG+TGG + chr6_3:92889517-92889536 Msa0965490:intron 15.0%
!!! ATTTTCACAAATTATTATCA+AGG - chr6_3:92889896-92889915 None:intergenic 15.0%
!!! TTTATTTTTGTTGTTGTAAT+GGG + chr6_3:92892697-92892716 Msa0965490:intron 15.0%
!!! TTACAAATTTTTTTATGTCA+GGG + chr6_3:92893136-92893155 Msa0965490:intron 15.0%
!! AAAGAAATAATTAATGTAGT+TGG - chr6_3:92893357-92893376 None:intergenic 15.0%
!!! TGTATTAATATTGTTGTTTT+TGG + chr6_3:92893873-92893892 Msa0965490:intron 15.0%
!!! TTCTTTCAATATTTTAATTG+AGG - chr6_3:92894298-92894317 None:intergenic 15.0%
!! TTTCAAATTATTATTTGTGT+CGG + chr6_3:92895586-92895605 Msa0965490:intron 15.0%
!!! TCTTTTTATCTTTCAATAAT+TGG - chr6_3:92895893-92895912 None:intergenic 15.0%
!! AAAATGGAAAAATATCATAT+TGG + chr6_3:92896664-92896683 Msa0965490:intron 15.0%
!! TAGTCAATAATTGTTTATTT+AGG - chr6_3:92896862-92896881 None:intergenic 15.0%
!! TGACAAATTTATTACAAAAA+TGG + chr6_3:92898887-92898906 Msa0965490:intron 15.0%
!! CATTACAATAACAAAAATAA+AGG - chr6_3:92899620-92899639 None:intergenic 15.0%
!!! CTTTATTTTTGTTATTGTAA+TGG + chr6_3:92899618-92899637 Msa0965490:intron 15.0%
!!! TAACTTTTATTTTATCTTCT+TGG + chr6_3:92899738-92899757 Msa0965490:intron 15.0%
!! GAGAATATTAATAAATAAAG+AGG - chr6_3:92900245-92900264 None:intergenic 15.0%
!! TTTAGTGTAATTATAAGTGT+CGG - chr6_3:92889377-92889396 None:intergenic 20.0%
!! AATAATTTAATTCAATGTGG+TGG + chr6_3:92889520-92889539 Msa0965490:intron 20.0%
!!! TTTTGTAATATCTGAATTGT+TGG + chr6_3:92889998-92890017 Msa0965490:intron 20.0%
!! GACAAATTGATATAATTCAA+TGG + chr6_3:92890334-92890353 Msa0965490:intron 20.0%
!! GACTAAAAAAATTCAATTGA+AGG - chr6_3:92890510-92890529 None:intergenic 20.0%
!! TTGCAAATTTGTAAATTTGA+AGG + chr6_3:92890690-92890709 Msa0965490:intron 20.0%
!! ATTCTAACAAAAAAAATTCC+TGG - chr6_3:92891004-92891023 None:intergenic 20.0%
!! AAGGTTATTACTGATAAAAT+AGG - chr6_3:92891479-92891498 None:intergenic 20.0%
!!! TTTTGTCGATTTAAATGATT+TGG - chr6_3:92891524-92891543 None:intergenic 20.0%
!! TACATCATTTAATCTAGAAA+TGG - chr6_3:92891925-92891944 None:intergenic 20.0%
!!! TCTTTATCTAATGGATTTAT+TGG + chr6_3:92892376-92892395 Msa0965490:intron 20.0%
!!! CTTTATTTTTGTTGTTGTAA+TGG + chr6_3:92892696-92892715 Msa0965490:intron 20.0%
!! TGTACATATCTTTATAAGAA+TGG + chr6_3:92893025-92893044 Msa0965490:intron 20.0%
!!! GTTACAAATTTTTTTATGTC+AGG + chr6_3:92893135-92893154 Msa0965490:intron 20.0%
!!! TACAAATTTTTTTATGTCAG+GGG + chr6_3:92893137-92893156 Msa0965490:intron 20.0%
!!! TCAAAAGAGTTTTATAATCA+GGG - chr6_3:92893294-92893313 None:intergenic 20.0%
!!! TTCAAAAGAGTTTTATAATC+AGG - chr6_3:92893295-92893314 None:intergenic 20.0%
!! AATCAGCAATAAAAAACATA+TGG + chr6_3:92893414-92893433 Msa0965490:intron 20.0%
!! TATTTAAGCAATCTTAAAGT+TGG - chr6_3:92893613-92893632 None:intergenic 20.0%
!! AAAAACACAAAAATCAAGAA+AGG - chr6_3:92893752-92893771 None:intergenic 20.0%
!! CAATATTAATACATAAAGAG+AGG - chr6_3:92893866-92893885 None:intergenic 20.0%
!! TAGAATCTCTATATAAATAG+AGG - chr6_3:92894644-92894663 None:intergenic 20.0%
!! TAGATCAAAGTATAATTACT+TGG + chr6_3:92895032-92895051 Msa0965490:intron 20.0%
!! ATACTATTTATCTCTTCAAA+TGG + chr6_3:92895183-92895202 Msa0965490:intron 20.0%
!!! ATTTATTTTCAAGTAAGAAG+TGG - chr6_3:92895420-92895439 None:intergenic 20.0%
!! ATATTATTCCAGTGAATTAT+GGG + chr6_3:92895559-92895578 Msa0965490:intron 20.0%
!!! AAGTCAAACTTTTTTTCTTT+AGG + chr6_3:92895830-92895849 Msa0965490:intron 20.0%
!!! AGTCAAACTTTTTTTCTTTA+GGG + chr6_3:92895831-92895850 Msa0965490:intron 20.0%
!! TTGAATATGAAATGCAAATA+GGG - chr6_3:92895942-92895961 None:intergenic 20.0%
!! ATTGAATATGAAATGCAAAT+AGG - chr6_3:92895943-92895962 None:intergenic 20.0%
!! ATAAAAATAAGTATGAGATG+AGG - chr6_3:92896298-92896317 None:intergenic 20.0%
!! AATTAAATGTTGCATTAGAT+GGG - chr6_3:92896377-92896396 None:intergenic 20.0%
!! AAATTACTGTCAATATTCAA+TGG - chr6_3:92896430-92896449 None:intergenic 20.0%
!! CTTAAATTATATGTTGCATT+TGG - chr6_3:92896506-92896525 None:intergenic 20.0%
!! TAACCAAAAGACTTAAAATT+TGG + chr6_3:92896543-92896562 Msa0965490:intron 20.0%
!! TAAAATCTAGTTAACAAAGA+AGG - chr6_3:92896583-92896602 None:intergenic 20.0%
!!! TTTGTTAACTAGATTTTAGA+AGG + chr6_3:92896585-92896604 Msa0965490:intron 20.0%
!!! GGTTTTATTTAGATGTTAAT+AGG - chr6_3:92896708-92896727 None:intergenic 20.0%
!!! GATTTTTTTTTTTGAAGGAA+GGG - chr6_3:92896729-92896748 None:intergenic 20.0%
!!! AGATTTTTTTTTTTGAAGGA+AGG - chr6_3:92896730-92896749 None:intergenic 20.0%
!! AGAAAATGTCATAATTTAGT+GGG + chr6_3:92898214-92898233 Msa0965490:intron 20.0%
!! TAGTTAAGTTAATGATTACT+AGG + chr6_3:92898602-92898621 Msa0965490:intron 20.0%
!!! TCTTTATCAAATGGATTTAT+TGG + chr6_3:92899317-92899336 Msa0965490:intron 20.0%
!!! ACATAGCAAAAGAATTTTAT+AGG - chr6_3:92899715-92899734 None:intergenic 20.0%
!! ATTAACATCATTAAAAGACA+TGG - chr6_3:92900002-92900021 None:intergenic 20.0%
!!! TGATTTTTATAGAACACAAA+TGG + chr6_3:92900115-92900134 Msa0965490:intron 20.0%
!!! GATTTTTATAGAACACAAAT+GGG + chr6_3:92900116-92900135 Msa0965490:intron 20.0%
!! ATTCTCAATTCTTAAAACAA+TGG - chr6_3:92900166-92900185 None:intergenic 20.0%
!!! TTTTGTCATTTCTGAATTGT+TGG + chr6_3:92889136-92889155 Msa0965490:intron 25.0%
! TTAACAAATTATTATCAGGG+TGG - chr6_3:92889262-92889281 None:intergenic 25.0%
!!! TCTTTTAGAAGGTGTTATTT+TGG + chr6_3:92889601-92889620 Msa0965490:intron 25.0%
!!! CTTTTAGAAGGTGTTATTTT+GGG + chr6_3:92889602-92889621 Msa0965490:intron 25.0%
!! AATGATACTTTTACAACAGA+TGG - chr6_3:92890541-92890560 None:intergenic 25.0%
!! GTGATTCATTCTTTTATATG+AGG + chr6_3:92890753-92890772 Msa0965490:intron 25.0%
! TTACTGATAAAATAGGAACT+AGG - chr6_3:92891472-92891491 None:intergenic 25.0%
!!! TTTTATTACTAGCTTTACAG+AGG - chr6_3:92891630-92891649 None:intergenic 25.0%
! AAATTCTAATACATGCATCT+TGG + chr6_3:92891689-92891708 Msa0965490:intron 25.0%
! GATCTTAATCTTGTTCAATT+GGG - chr6_3:92891786-92891805 None:intergenic 25.0%
! TGATCTTAATCTTGTTCAAT+TGG - chr6_3:92891787-92891806 None:intergenic 25.0%
! TAAGATCACTTCATATTTGA+TGG + chr6_3:92891799-92891818 Msa0965490:intron 25.0%
! TCATTTAATCTAGAAATGGA+AGG - chr6_3:92891921-92891940 None:intergenic 25.0%
! GTATATACTATAACTCTGTT+CGG + chr6_3:92891942-92891961 Msa0965490:intron 25.0%
! GTGATTAAAGTAAAGTTGTT+TGG + chr6_3:92892002-92892021 Msa0965490:intron 25.0%
!! TTAGCAACTTTAATTTCTTC+TGG + chr6_3:92892320-92892339 Msa0965490:intron 25.0%
! ATCCATTAGATAAAGAATGA+AGG - chr6_3:92892372-92892391 None:intergenic 25.0%
!!! GTAGTTTTGATTTTCAGTTA+CGG + chr6_3:92892854-92892873 Msa0965490:intron 25.0%
!!! ACTCTATTTTCTTATTTCTC+AGG - chr6_3:92892884-92892903 None:intergenic 25.0%
! AATAAGAAAATAGAGTGCAA+TGG + chr6_3:92892888-92892907 Msa0965490:intron 25.0%
! CCTAATCACAATTATTATCA+TGG - chr6_3:92893116-92893135 None:intergenic 25.0%
! CCATGATAATAATTGTGATT+AGG + chr6_3:92893113-92893132 Msa0965490:intron 25.0%
!! ACAAATGGGTCTTATAAAAA+GGG - chr6_3:92893329-92893348 None:intergenic 25.0%
!! AACAAATGGGTCTTATAAAA+AGG - chr6_3:92893330-92893349 None:intergenic 25.0%
! TGTAGTTGGAAATAACAAAT+GGG - chr6_3:92893343-92893362 None:intergenic 25.0%
! ATGTAGTTGGAAATAACAAA+TGG - chr6_3:92893344-92893363 None:intergenic 25.0%
!!! ATTCTCGTAATTTTAGCAAA+AGG + chr6_3:92893526-92893545 Msa0965490:intron 25.0%
!!! TTCTCGTAATTTTAGCAAAA+GGG + chr6_3:92893527-92893546 Msa0965490:intron 25.0%
!! ATTTTACATGTTTACCCTTT+AGG - chr6_3:92893665-92893684 None:intergenic 25.0%
! AAAATCCAAATACAACAGTT+TGG - chr6_3:92893903-92893922 None:intergenic 25.0%
! TATCTATCGAAGTTGTTAAT+AGG + chr6_3:92893933-92893952 Msa0965490:intron 25.0%
! ATACTGAAACCACTTTAATA+TGG + chr6_3:92894130-92894149 Msa0965490:intron 25.0%
! GTAACAATACCATATTAAAG+TGG - chr6_3:92894142-92894161 None:intergenic 25.0%
! AAATTAAAAAGTGGAAATGG+TGG - chr6_3:92894273-92894292 None:intergenic 25.0%
! GAGAAATTAAAAAGTGGAAA+TGG - chr6_3:92894276-92894295 None:intergenic 25.0%
! ATTGAGGAGAAATTAAAAAG+TGG - chr6_3:92894282-92894301 None:intergenic 25.0%
! CGACATTATTATTCCAAAAA+GGG + chr6_3:92894355-92894374 Msa0965490:intron 25.0%
! AATAATACTCTTTATTCCGA+AGG + chr6_3:92894389-92894408 Msa0965490:intron 25.0%
! ATAATACTCTTTATTCCGAA+GGG + chr6_3:92894390-92894409 Msa0965490:intron 25.0%
! AAACAATTGGATTTGAATGA+AGG + chr6_3:92894796-92894815 Msa0965490:intron 25.0%
! ACCAACATAAGCTAAATTTA+TGG + chr6_3:92894858-92894877 Msa0965490:intron 25.0%
! CCAACATAAGCTAAATTTAT+GGG + chr6_3:92894859-92894878 Msa0965490:intron 25.0%
!!! TGTGTGTGTTTTATTTTATG+TGG + chr6_3:92894973-92894992 Msa0965490:intron 25.0%
!!! GTGTGTGTTTTATTTTATGT+GGG + chr6_3:92894974-92894993 Msa0965490:intron 25.0%
! AATTGAAAAAATAGAGTGTG+GGG - chr6_3:92895002-92895021 None:intergenic 25.0%
! GAATTGAAAAAATAGAGTGT+GGG - chr6_3:92895003-92895022 None:intergenic 25.0%
! TGAATTGAAAAAATAGAGTG+TGG - chr6_3:92895004-92895023 None:intergenic 25.0%
! TGTGATGTTGGAAAATAAAT+TGG - chr6_3:92895069-92895088 None:intergenic 25.0%
! CATATTATTCCAGTGAATTA+TGG + chr6_3:92895558-92895577 Msa0965490:intron 25.0%
! GGATGTAACTATAAAAGTAA+AGG - chr6_3:92895695-92895714 None:intergenic 25.0%
!! TGATTTTCATGTAGTCTATT+TGG - chr6_3:92895716-92895735 None:intergenic 25.0%
!! AACTTGTTTGAAAACTTTAC+CGG + chr6_3:92895787-92895806 Msa0965490:intron 25.0%
! AGAAGTCAAACATTTCTTTA+GGG + chr6_3:92895854-92895873 Msa0965490:intron 25.0%
! AGATTATGATGAAATAGTTG+AGG + chr6_3:92895910-92895929 Msa0965490:intron 25.0%
! GCATACTAAATTGTACTTAT+AGG - chr6_3:92896014-92896033 None:intergenic 25.0%
!!! TTTTAATTGCAGAGAATCAT+TGG - chr6_3:92896069-92896088 None:intergenic 25.0%
! TAGATTTAGAAAGAAAGAGT+AGG + chr6_3:92896237-92896256 Msa0965490:intron 25.0%
! CAATTAAATGTTGCATTAGA+TGG - chr6_3:92896378-92896397 None:intergenic 25.0%
!!! AAGCCAAATTTTAAGTCTTT+TGG - chr6_3:92896549-92896568 None:intergenic 25.0%
!! ACTTAAAATTTGGCTTATGA+GGG + chr6_3:92896553-92896572 Msa0965490:intron 25.0%
!! ATCCTTTGTTAACTAGATTT+TGG + chr6_3:92896623-92896642 Msa0965490:intron 25.0%
! TTCCAAAATCTAGTTAACAA+AGG - chr6_3:92896628-92896647 None:intergenic 25.0%
!! TTTGTTAACTAGATTTTGGA+AGG + chr6_3:92896627-92896646 Msa0965490:intron 25.0%
!! ATAATCTGAAATTCGATCAT+AGG - chr6_3:92896895-92896914 None:intergenic 25.0%
! TTTCTATATTGTTAGGGTTA+GGG - chr6_3:92896938-92896957 None:intergenic 25.0%
!!! TAGTTTTGTTATGTCTTCTT+CGG - chr6_3:92897047-92897066 None:intergenic 25.0%
!!! TTGTTAGAGGTATTATTACT+AGG + chr6_3:92897278-92897297 Msa0965490:intron 25.0%
! TATTATTACTAGGATGTTGA+AGG + chr6_3:92897288-92897307 Msa0965490:CDS 25.0%
! TAATTGATTAAGTGTGTGTT+TGG + chr6_3:92897861-92897880 Msa0965490:intron 25.0%
! TAATTGATTAAGTGTGTGTT+TGG + chr6_3:92897861-92897880 Msa0965490:intron 25.0%
! GAGAAAATGTCATAATTTAG+TGG + chr6_3:92898213-92898232 Msa0965490:intron 25.0%
!! TCTTCTAGTTAGAATAATTC+TGG + chr6_3:92898393-92898412 Msa0965490:intron 25.0%
!!! AGAATTGATTTTGACATGTT+TGG - chr6_3:92898447-92898466 None:intergenic 25.0%
! CAATTAGGAGATAAGATAAT+CGG + chr6_3:92898534-92898553 Msa0965490:intron 25.0%
!! ATTTTGCAATCTCGTAAATT+TGG + chr6_3:92898733-92898752 Msa0965490:intron 25.0%
! TAAATTTGTCAATTTCGCAA+TGG - chr6_3:92898878-92898897 None:intergenic 25.0%
!!! CTTTTATTTTATCTTCTTGG+AGG + chr6_3:92899741-92899760 Msa0965490:intron 25.0%
! TCAATTCTTAAAACAATGGA+CGG - chr6_3:92900162-92900181 None:intergenic 25.0%
!!! GAGTTTTGTTATGTCTTCTT+CGG - chr6_3:92888743-92888762 None:intergenic 30.0%
GAAGATTTCATCCTCAAATA+CGG + chr6_3:92888844-92888863 Msa0965490:CDS 30.0%
!!! TTGTTAGAGGTTTTATTACC+AGG + chr6_3:92888974-92888993 Msa0965490:CDS 30.0%
! TTGAACGAGAATGTTGATAA+TGG + chr6_3:92889000-92889019 Msa0965490:CDS 30.0%
!! TGAACGAGAATGTTGATAAT+GGG + chr6_3:92889001-92889020 Msa0965490:CDS 30.0%
!!! GAATGTTGATAATGGGATTT+TGG + chr6_3:92889008-92889027 Msa0965490:CDS 30.0%
AATTTAATTCAATGTGGTGG+TGG + chr6_3:92889523-92889542 Msa0965490:intron 30.0%
! TTTCAGTAGTTGTTTCGTAA+AGG + chr6_3:92889658-92889677 Msa0965490:intron 30.0%
GAAAATAATTCACATGTGTC+TGG + chr6_3:92889910-92889929 Msa0965490:intron 30.0%
! TGTTTGATAGCTATGAAACA+CGG + chr6_3:92890281-92890300 Msa0965490:intron 30.0%
!!! ATGGCTTGATGTTTTGAAAA+AGG + chr6_3:92890431-92890450 Msa0965490:intron 30.0%
!!! TGGCTTGATGTTTTGAAAAA+GGG + chr6_3:92890432-92890451 Msa0965490:intron 30.0%
!! TTTTGATTGTCAATACTGCA+AGG - chr6_3:92890731-92890750 None:intergenic 30.0%
!! TGCAGTATTGACAATCAAAA+TGG + chr6_3:92890731-92890750 Msa0965490:intron 30.0%
TTGACGAATGTGTAGAAAAA+TGG + chr6_3:92890835-92890854 Msa0965490:intron 30.0%
AGATGATAACTTCTAACATG+TGG + chr6_3:92891361-92891380 Msa0965490:intron 30.0%
TCACAGAAAAACATCAGAAA+CGG - chr6_3:92891426-92891445 None:intergenic 30.0%
AACTAGGAACAGATCAAATT+CGG - chr6_3:92891456-92891475 None:intergenic 30.0%
GTATATTAACTAACAAGCCT+AGG - chr6_3:92891564-92891583 None:intergenic 30.0%
ATATAATTGCATCACAATGC+AGG - chr6_3:92891591-92891610 None:intergenic 30.0%
TGATGCAATTATATCCGAAT+TGG + chr6_3:92891597-92891616 Msa0965490:intron 30.0%
!! ACAGAGGTTATTTTCCAATT+CGG - chr6_3:92891614-92891633 None:intergenic 30.0%
! GAAGTGTTTGGTAAAATTAG+CGG - chr6_3:92892184-92892203 None:intergenic 30.0%
! CAGATTGAATTTGAAGTGTT+TGG - chr6_3:92892196-92892215 None:intergenic 30.0%
CAAACACTTCAAATTCAATC+TGG + chr6_3:92892194-92892213 Msa0965490:intron 30.0%
ACAAATATCGTGCAAACTTA+GGG - chr6_3:92892255-92892274 None:intergenic 30.0%
AACAAATATCGTGCAAACTT+AGG - chr6_3:92892256-92892275 None:intergenic 30.0%
CTCCTTCATTCTTTATCTAA+TGG + chr6_3:92892367-92892386 Msa0965490:intron 30.0%
CAACATGACATATGTTGTAA+TGG + chr6_3:92892734-92892753 Msa0965490:intron 30.0%
ATTCCAACTTAGTAAGATTG+TGG + chr6_3:92892923-92892942 Msa0965490:intron 30.0%
TTCCAACTTAGTAAGATTGT+GGG + chr6_3:92892924-92892943 Msa0965490:intron 30.0%
! CTTTCTTCACATATTTGTTG+AGG - chr6_3:92893195-92893214 None:intergenic 30.0%
TAAACTAACTCTCTCTCTTA+AGG + chr6_3:92893443-92893462 Msa0965490:intron 30.0%
AATTACGAGAATCAAGAAAG+TGG - chr6_3:92893518-92893537 None:intergenic 30.0%
TAACTAATTCTGTCTCCTAA+AGG + chr6_3:92893647-92893666 Msa0965490:intron 30.0%
AACTAATTCTGTCTCCTAAA+GGG + chr6_3:92893648-92893667 Msa0965490:intron 30.0%
ATAAAGAGAGGATGAACAAT+TGG - chr6_3:92893854-92893873 None:intergenic 30.0%
GATTTCCAAACTGTTGTATT+TGG + chr6_3:92893895-92893914 Msa0965490:intron 30.0%
TGATAGTTTGGAGAACTTAA+AGG - chr6_3:92894217-92894236 None:intergenic 30.0%
AGTTCTCCAAACTATCAATA+TGG + chr6_3:92894220-92894239 Msa0965490:intron 30.0%
! GTAGTACCATATTGATAGTT+TGG - chr6_3:92894229-92894248 None:intergenic 30.0%
GCGACATTATTATTCCAAAA+AGG + chr6_3:92894354-92894373 Msa0965490:intron 30.0%
! TTAAGATCATAGTCCCTTTT+TGG - chr6_3:92894371-92894390 None:intergenic 30.0%
TTCGATAATATAAGTCCCTT+CGG - chr6_3:92894408-92894427 None:intergenic 30.0%
AAGGGACTTATATTATCGAA+GGG + chr6_3:92894408-92894427 Msa0965490:intron 30.0%
AAGATCATTCTTAATTCCGA+AGG + chr6_3:92894333-92894352 Msa0965490:intron 30.0%
AGATCATTCTTAATTCCGAA+GGG + chr6_3:92894443-92894462 Msa0965490:intron 30.0%
AAGAACACTCTTAATTCTGA+AGG + chr6_3:92894495-92894514 Msa0965490:intron 30.0%
AGAACACTCTTAATTCTGAA+GGG + chr6_3:92894496-92894515 Msa0965490:intron 30.0%
! AAAGAGTTTCATTGAGTTGT+CGG - chr6_3:92894595-92894614 None:intergenic 30.0%
AGTATCGTTGAACTGATTAA+TGG - chr6_3:92894731-92894750 None:intergenic 30.0%
ATTAATCAGTTCAACGATAC+TGG + chr6_3:92894730-92894749 Msa0965490:intron 30.0%
AAGAAACAAATCCACAAAAG+TGG + chr6_3:92894766-92894785 Msa0965490:intron 30.0%
! CCCATAAATTTAGCTTATGT+TGG - chr6_3:92894862-92894881 None:intergenic 30.0%
ATTGAAAAAATAGAGTGTGG+GGG - chr6_3:92895001-92895020 None:intergenic 30.0%
GTAGAAGAGTTTAAATTGAG+AGG + chr6_3:92895213-92895232 Msa0965490:intron 30.0%
GAATACATGAAACACCATAT+AGG - chr6_3:92895260-92895279 None:intergenic 30.0%
! TTTAAGAAGAGCATGAGAAA+TGG - chr6_3:92895287-92895306 None:intergenic 30.0%
ATGCATTAGTAAGAGAATGA+AGG - chr6_3:92895336-92895355 None:intergenic 30.0%
GAATGTACCAAGAAAAAAGA+GGG - chr6_3:92895386-92895405 None:intergenic 30.0%
AGAATGTACCAAGAAAAAAG+AGG - chr6_3:92895387-92895406 None:intergenic 30.0%
!!! TATTTTCAAGTAAGAAGTGG+AGG - chr6_3:92895417-92895436 None:intergenic 30.0%
TTCACTGGAATAATATGTGT+TGG - chr6_3:92895555-92895574 None:intergenic 30.0%
GAAAAAATCCCATAATTCAC+TGG - chr6_3:92895570-92895589 None:intergenic 30.0%
ACTTGTTTGAAAACTTTACC+GGG + chr6_3:92895788-92895807 Msa0965490:intron 30.0%
AAAGACAGAATATTTAGTCC+CGG - chr6_3:92895809-92895828 None:intergenic 30.0%
GAGAAGTCAAACATTTCTTT+AGG + chr6_3:92895853-92895872 Msa0965490:intron 30.0%
TACAATGACATTGAAATGCA+AGG + chr6_3:92896037-92896056 Msa0965490:intron 30.0%
ACAATGACATTGAAATGCAA+GGG + chr6_3:92896038-92896057 Msa0965490:intron 30.0%
CTATTTATCGAGCAATCTAA+TGG - chr6_3:92896106-92896125 None:intergenic 30.0%
! GACTTAAAATTTGGCTTATG+AGG + chr6_3:92896552-92896571 Msa0965490:intron 30.0%
!! ACTAAATGATTGGTTTCAAG+TGG + chr6_3:92896783-92896802 Msa0965490:intron 30.0%
! CCATTTTAAATAACCGAGTT+CGG + chr6_3:92896834-92896853 Msa0965490:intron 30.0%
TGATCGAATTTCAGATTATC+TGG + chr6_3:92896896-92896915 Msa0965490:intron 30.0%
GTTTCTATATTGTTAGGGTT+AGG - chr6_3:92896939-92896958 None:intergenic 30.0%
!! CTGCTGTTTCTATATTGTTA+GGG - chr6_3:92896944-92896963 None:intergenic 30.0%
GAAGATTTCATCTCCAAATA+CGG + chr6_3:92897148-92897167 Msa0965490:CDS 30.0%
!!! ACACACAGATTTTTTCAGAT+GGG - chr6_3:92897225-92897244 None:intergenic 30.0%
!!! AACACACAGATTTTTTCAGA+TGG - chr6_3:92897226-92897245 None:intergenic 30.0%
! TTCTCTGATAATGCTAAACT+TGG + chr6_3:92897247-92897266 Msa0965490:CDS 30.0%
!! CTTGGTGTTAATATTGTTAG+AGG + chr6_3:92897265-92897284 Msa0965490:intron 30.0%
! TTGAAGGAGAATGTTGATAA+TGG + chr6_3:92897304-92897323 Msa0965490:CDS 30.0%
!! TGAAGGAGAATGTTGATAAT+GGG + chr6_3:92897305-92897324 Msa0965490:CDS 30.0%
!! GAATGTTGATAATGGGATTA+TGG + chr6_3:92897312-92897331 Msa0965490:CDS 30.0%
CAATTACCATAAAGACTTCA+AGG - chr6_3:92897408-92897427 None:intergenic 30.0%
AATTAGATAGCTTCATGTGT+AGG + chr6_3:92897787-92897806 Msa0965490:intron 30.0%
TCTAGTTAGAATAATTCTGG+AGG + chr6_3:92898396-92898415 Msa0965490:intron 30.0%
!!! TACACCTCTAGAATCAATTT+TGG + chr6_3:92898466-92898485 Msa0965490:intron 30.0%
GGTTAATCAGGTAATCAATT+AGG + chr6_3:92898519-92898538 Msa0965490:intron 30.0%
TTTGATTGTCAATACTGCAA+AGG - chr6_3:92890730-92890749 None:intergenic 30.0%
!! TGCAGTATTGACAATCAAAA+TGG + chr6_3:92890731-92890750 Msa0965490:intron 30.0%
!! AGTATTGACAATCAAAATGG+TGG + chr6_3:92890734-92890753 Msa0965490:intron 30.0%
! GTGGTTCATTCTTTTATAAG+AGG + chr6_3:92898800-92898819 Msa0965490:intron 30.0%
! AATTTCTGACATGTGTCATT+AGG + chr6_3:92898997-92899016 Msa0965490:intron 30.0%
ATATAGTTCTTCATGTGTGT+TGG + chr6_3:92899060-92899079 Msa0965490:intron 30.0%
CTCTGTCATTCTTTATCAAA+TGG + chr6_3:92899308-92899327 Msa0965490:intron 30.0%
! GGATCATTCGTCAAAATTTT+AGG - chr6_3:92899445-92899464 None:intergenic 30.0%
CAACATGATATATGTTGCAA+TGG + chr6_3:92899656-92899675 Msa0965490:intron 30.0%
! GTAGTTTCAATTTTCGGTTA+TGG + chr6_3:92899841-92899860 Msa0965490:intron 30.0%
TGAGAAATATATACATGCAC+GGG - chr6_3:92899964-92899983 None:intergenic 30.0%
GTGAGAAATATATACATGCA+CGG - chr6_3:92899965-92899984 None:intergenic 30.0%
GTGAAACATGTAAGTTGTAT+TGG - chr6_3:92900067-92900086 None:intergenic 30.0%
GTATTCATGCATTAGAACAA+TGG - chr6_3:92900094-92900113 None:intergenic 30.0%
!!! TCTCTTTAGTTTTCACTCAA+GGG + chr6_3:92900267-92900286 Msa0965490:intron 30.0%
!!! ACATTTGGAGAAGGGTTTTT+TGG - chr6_3:92888774-92888793 None:intergenic 35.0%
AGTTTCTGTCGGATAACATT+TGG - chr6_3:92888789-92888808 None:intergenic 35.0%
ACACATGAAACGAGAACAAT+TGG + chr6_3:92888870-92888889 Msa0965490:CDS 35.0%
!!! ACACGCAGATTTTTTCAGAT+GGG - chr6_3:92888921-92888940 None:intergenic 35.0%
!!! AACACGCAGATTTTTTCAGA+TGG - chr6_3:92888922-92888941 None:intergenic 35.0%
! TTCTCTGATGATGCTAAACT+TGG + chr6_3:92888943-92888962 Msa0965490:CDS 35.0%
!! CTTGGTGTTAAGATTGTTAG+AGG + chr6_3:92888961-92888980 Msa0965490:intron 35.0%
CAATTACCAGAAAGACTTCA+AGG - chr6_3:92889104-92889123 None:intergenic 35.0%
ATTGATATGCAACACTGACA+CGG + chr6_3:92889159-92889178 Msa0965490:intron 35.0%
TTGTTTGATCTTGAGAGTAG+TGG + chr6_3:92889549-92889568 Msa0965490:intron 35.0%
TCAGCTTAATTGATGTCGTA+GGG + chr6_3:92889573-92889592 Msa0965490:intron 35.0%
!!! TGTTATTTTGGGATGTGTAG+TGG + chr6_3:92889613-92889632 Msa0965490:intron 35.0%
! TTCGTAAAGGAGTCTGTTTT+AGG + chr6_3:92889671-92889690 Msa0965490:intron 35.0%
!! TTTTAGGTGGTGATGTGTTT+TGG + chr6_3:92889687-92889706 Msa0965490:intron 35.0%
!!! TTTTGGTGGGTTAATCTTCA+GGG + chr6_3:92889704-92889723 Msa0965490:intron 35.0%
!!! TAATCTTCAGGGGTGTTTTT+AGG + chr6_3:92889715-92889734 Msa0965490:intron 35.0%
TGGACGAAAGAAGATACAAA+TGG - chr6_3:92889770-92889789 None:intergenic 35.0%
TCAAGCTCTATCTAACTTTG+TGG - chr6_3:92890165-92890184 None:intergenic 35.0%
TTAGATAGAGCTTGATGTGT+AGG + chr6_3:92890170-92890189 Msa0965490:intron 35.0%
!! TGTTGGAAGGTGTTTGAAAA+AGG + chr6_3:92890193-92890212 Msa0965490:intron 35.0%
ATCACATATCGTGTCAAACA+TGG - chr6_3:92890224-92890243 None:intergenic 35.0%
!! TTTTGAAAAAGGGTGATGAC+TGG + chr6_3:92890442-92890461 Msa0965490:intron 35.0%
ATCATTCTTTGAACCATCAC+AGG + chr6_3:92890555-92890574 Msa0965490:intron 35.0%
TGCAAACAAGAACTAAGAAC+AGG - chr6_3:92890609-92890628 None:intergenic 35.0%
TAAGTCTACCACTAATCCTA+CGG + chr6_3:92890632-92890651 Msa0965490:intron 35.0%
ATACACTGTGAAAGATACTC+AGG + chr6_3:92891205-92891224 Msa0965490:CDS 35.0%
CTAATACATGCATCTTGGTT+TGG + chr6_3:92891694-92891713 Msa0965490:intron 35.0%
! TGGTTTGGACAATGCATATA+AGG + chr6_3:92891709-92891728 Msa0965490:intron 35.0%
GGTTTGGACAATGCATATAA+GGG + chr6_3:92891710-92891729 Msa0965490:intron 35.0%
! GCGGAATTTAGCATTTCTTT+TGG - chr6_3:92891761-92891780 None:intergenic 35.0%
! AATCTTGTTCAATTGGGTTG+CGG - chr6_3:92891780-92891799 None:intergenic 35.0%
AAGTTGCTAAGACAAGTGAA+AGG - chr6_3:92892310-92892329 None:intergenic 35.0%
! TTGCGAGATATTATGGACTA+AGG + chr6_3:92892526-92892545 Msa0965490:CDS 35.0%
GTATGTAATATATGTGCCTG+CGG - chr6_3:92892589-92892608 None:intergenic 35.0%
GATAAGCTCAAGAAGCAATT+CGG - chr6_3:92892611-92892630 None:intergenic 35.0%
GAATTGCTTCTTGAGCTTAT+CGG + chr6_3:92892610-92892629 Msa0965490:intron 35.0%
! GCATGCTTGGCATAAATTTT+AGG - chr6_3:92892660-92892679 None:intergenic 35.0%
ATATAATCACGATGCATGCT+TGG - chr6_3:92892673-92892692 None:intergenic 35.0%
ATACATCCAAGACACAAACA+GGG - chr6_3:92892799-92892818 None:intergenic 35.0%
AATACATCCAAGACACAAAC+AGG - chr6_3:92892800-92892819 None:intergenic 35.0%
AACCTATATCAAATCAGCAC+AGG + chr6_3:92893216-92893235 Msa0965490:intron 35.0%
!! TACCTGTGCTGATTTGATAT+AGG - chr6_3:92893221-92893240 None:intergenic 35.0%
!! AGTTTTATAATCAGGGACAG+AGG - chr6_3:92893287-92893306 None:intergenic 35.0%
!!! TAGCTAAGCTTGTTTTATCC+TGG - chr6_3:92894030-92894049 None:intergenic 35.0%
GAGATTTACACCTTCGAATA+TGG + chr6_3:92894089-92894108 Msa0965490:intron 35.0%
GTGGTTTCAGTATTAAAGAG+TGG - chr6_3:92894123-92894142 None:intergenic 35.0%
GTATTGTTACCACTCTGTTA+TGG + chr6_3:92894152-92894171 Msa0965490:intron 35.0%
GAACTTAAAGGTTAGAATGG+TGG - chr6_3:92894205-92894224 None:intergenic 35.0%
GGAGAACTTAAAGGTTAGAA+TGG - chr6_3:92894208-92894227 None:intergenic 35.0%
TTGGAATAATAATGTCGCGT+CGG - chr6_3:92894352-92894371 None:intergenic 35.0%
GAAGGGACTTATATTATCGA+AGG + chr6_3:92894407-92894426 Msa0965490:intron 35.0%
! TTTTCGGTTTAATGTCCCTT+CGG - chr6_3:92894461-92894480 None:intergenic 35.0%
AAGGGACATTAAACCGAAAA+GGG + chr6_3:92894461-92894480 Msa0965490:intron 35.0%
ATTAAACCGAAAAGGGACTA+TGG + chr6_3:92894468-92894487 Msa0965490:intron 35.0%
! TTAAGACCATAGTCCCTTTT+CGG - chr6_3:92894477-92894496 None:intergenic 35.0%
! ATTCTGAAGGGACAGAAAAA+AGG + chr6_3:92894508-92894527 Msa0965490:intron 35.0%
! AAGAGTTTCATTGAGTTGTC+GGG - chr6_3:92894594-92894613 None:intergenic 35.0%
GACAACTCAATGAAACTCTT+TGG + chr6_3:92894594-92894613 Msa0965490:intron 35.0%
TGCGACAACAATTACTCTAA+TGG + chr6_3:92894683-92894702 Msa0965490:intron 35.0%
AAACAAATCCACAAAAGTGG+AGG + chr6_3:92894769-92894788 Msa0965490:intron 35.0%
AAGTGGAGGAAACAAACAAT+TGG + chr6_3:92894783-92894802 Msa0965490:intron 35.0%
TTGGAACATTAGTGTGATGT+TGG - chr6_3:92895081-92895100 None:intergenic 35.0%
TTAGGGAGGAGAATATTTGT+TGG - chr6_3:92895100-92895119 None:intergenic 35.0%
! AGAGAGCATAAGCTAGATTA+GGG - chr6_3:92895117-92895136 None:intergenic 35.0%
! AAGAGAGCATAAGCTAGATT+AGG - chr6_3:92895118-92895137 None:intergenic 35.0%
TCACTATTCCACATCCTATA+TGG + chr6_3:92895243-92895262 Msa0965490:intron 35.0%
ATGAAACACCATATAGGATG+TGG - chr6_3:92895254-92895273 None:intergenic 35.0%
ATTAGTAAGAGAATGAAGGC+TGG - chr6_3:92895332-92895351 None:intergenic 35.0%
TCCATGAAAGAAATTCGAGT+AGG + chr6_3:92895355-92895374 Msa0965490:intron 35.0%
TCCTACTCGAATTTCTTTCA+TGG - chr6_3:92895359-92895378 None:intergenic 35.0%
CTATAAAAGTAAAGGACTCG+AGG - chr6_3:92895687-92895706 None:intergenic 35.0%
AAACATATGGTCCTGATCTA+AGG - chr6_3:92895760-92895779 None:intergenic 35.0%
CAAGTTAACCACGAAACATA+TGG - chr6_3:92895773-92895792 None:intergenic 35.0%
! ATTGCAGAGAATCATTGGTT+TGG - chr6_3:92896064-92896083 None:intergenic 35.0%
ATGAGATGAGGAAACTTCTA+TGG - chr6_3:92896286-92896305 None:intergenic 35.0%
GGAGACTTCATAGTCAAAAA+TGG + chr6_3:92896648-92896667 Msa0965490:intron 35.0%
CCGAACTCGGTTATTTAAAA+TGG - chr6_3:92896837-92896856 None:intergenic 35.0%
GTTTATTTAGGAACCGAACT+CGG - chr6_3:92896850-92896869 None:intergenic 35.0%
! TTAGGGTTAGGGATTTTTGT+GGG - chr6_3:92896927-92896946 None:intergenic 35.0%
!! GCTGCTGTTTCTATATTGTT+AGG - chr6_3:92896945-92896964 None:intergenic 35.0%
ATAGCTTCATGTGTAGGTTT+AGG + chr6_3:92897793-92897812 Msa0965490:intron 35.0%
!! AGGAAGAAGGTGTTTGAAAA+AGG + chr6_3:92897813-92897832 Msa0965490:intron 35.0%
!! GGAAGAAGGTGTTTGAAAAA+GGG + chr6_3:92897814-92897833 Msa0965490:intron 35.0%
AGTTAGATAGCTTGATGTGT+AGG + chr6_3:92898063-92898082 Msa0965490:intron 35.0%
!! TTGGAAGAAGGTGTTTGAAA+AGG + chr6_3:92898088-92898107 Msa0965490:intron 35.0%
!! TGGAAGAAGGTGTTTGAAAA+GGG + chr6_3:92898089-92898108 Msa0965490:intron 35.0%
! ACAGCCAAAATTGATTCTAG+AGG - chr6_3:92898473-92898492 None:intergenic 35.0%
! TGTATGCTTGGTTTCACTTT+TGG - chr6_3:92898496-92898515 None:intergenic 35.0%
TGATTAACCTAGTGTATGCT+TGG - chr6_3:92898508-92898527 None:intergenic 35.0%
AAGCATACACTAGGTTAATC+AGG + chr6_3:92898507-92898526 Msa0965490:intron 35.0%
GATAAGATAATCGGTTAGAG+AGG + chr6_3:92898543-92898562 Msa0965490:intron 35.0%
! TAGGATTAGTGGTAGACTAA+TGG - chr6_3:92898680-92898699 None:intergenic 35.0%
TTAGTCTACCACTAATCCTA+TGG + chr6_3:92898680-92898699 Msa0965490:intron 35.0%
TTGCAATCTCGTAAATTTGG+AGG + chr6_3:92898736-92898755 Msa0965490:intron 35.0%
! TTTAAGGTTGAGGTAATCGT+CGG + chr6_3:92899093-92899112 Msa0965490:intron 35.0%
ATACACTGTCAAAGATACTC+AGG + chr6_3:92899216-92899235 Msa0965490:CDS 35.0%
! TTGCGAGATATTATGGACTA+AGG + chr6_3:92892526-92892545 Msa0965490:CDS 35.0%
GATAAGCTCAAGAAGCAATT+CGG - chr6_3:92892611-92892630 None:intergenic 35.0%
GAATTGCTTCTTGAGCTTAT+CGG + chr6_3:92892610-92892629 Msa0965490:intron 35.0%
! GCATGCTTGGCATAAATTTT+AGG - chr6_3:92892660-92892679 None:intergenic 35.0%
ATATAACCACTATGCATGCT+TGG - chr6_3:92899595-92899614 None:intergenic 35.0%
! TATCTTCTTGGAGGTTCTTT+TGG + chr6_3:92899750-92899769 Msa0965490:intron 35.0%
! GCAGCAGTAGTTTCAATTTT+CGG + chr6_3:92899835-92899854 Msa0965490:intron 35.0%
AATATATACATGCACGGGTA+AGG - chr6_3:92899959-92899978 None:intergenic 35.0%
AATGCACACATGGAATAATG+AGG - chr6_3:92900210-92900229 None:intergenic 35.0%
!!! GTCTCTTTAGTTTTCACTCA+AGG + chr6_3:92900266-92900285 Msa0965490:intron 35.0%
GTCGGATAACATTTGGAGAA+GGG - chr6_3:92888782-92888801 None:intergenic 40.0%
TGTCGGATAACATTTGGAGA+AGG - chr6_3:92888783-92888802 None:intergenic 40.0%
TTCGACAAGGTAGTTTCTGT+CGG - chr6_3:92888800-92888819 None:intergenic 40.0%
GATGAAATCTTCTCGAGACA+TGG - chr6_3:92888836-92888855 None:intergenic 40.0%
!!! TGGGTTGTTTCTGTGAGTTT+TGG - chr6_3:92888902-92888921 None:intergenic 40.0%
AACATTCTCGTTCAACATCC+TGG - chr6_3:92888995-92889014 None:intergenic 40.0%
GTTGCTGAAATGAGTTCTGT+TGG + chr6_3:92889069-92889088 Msa0965490:CDS 40.0%
!! TATAAGTGTCGGTGTCTTGT+CGG - chr6_3:92889366-92889385 None:intergenic 40.0%
CTAACACATGCTATGAAGCA+CGG - chr6_3:92889455-92889474 None:intergenic 40.0%
CTCAGCTTAATTGATGTCGT+AGG + chr6_3:92889572-92889591 Msa0965490:intron 40.0%
CAGCTTAATTGATGTCGTAG+GGG + chr6_3:92889574-92889593 Msa0965490:intron 40.0%
GTGTAGTGGCAATGAGTTTA+TGG + chr6_3:92889627-92889646 Msa0965490:intron 40.0%
!! GTAAAGGAGTCTGTTTTAGG+TGG + chr6_3:92889674-92889693 Msa0965490:intron 40.0%
!!! GTTTTGGTGGGTTAATCTTC+AGG + chr6_3:92889703-92889722 Msa0965490:intron 40.0%
!! TTTGGTGGGTTAATCTTCAG+GGG + chr6_3:92889705-92889724 Msa0965490:intron 40.0%
TATGGTGTACCGTCTATATG+CGG + chr6_3:92889742-92889761 Msa0965490:intron 40.0%
ATAGCTATGAAACACGGACA+TGG + chr6_3:92890287-92890306 Msa0965490:intron 40.0%
TTCAATGGAATTGCGTGTGT+CGG + chr6_3:92890349-92890368 Msa0965490:intron 40.0%
ATTCTTTGAACCATCACAGG+TGG + chr6_3:92890558-92890577 Msa0965490:intron 40.0%
CACATTCGTCAAATTCGCAA+TGG - chr6_3:92890827-92890846 None:intergenic 40.0%
TGCAAAGTTGCACAGTATAG+AGG + chr6_3:92890936-92890955 Msa0965490:intron 40.0%
GCAAAGTTGCACAGTATAGA+GGG + chr6_3:92890937-92890956 Msa0965490:intron 40.0%
AAAAAATTCCTGGTGACACG+TGG - chr6_3:92890994-92891013 None:intergenic 40.0%
GAGTCCTTCTTCATATGTGT+TGG + chr6_3:92891049-92891068 Msa0965490:intron 40.0%
TCCTTCTTCATATGTGTTGG+TGG + chr6_3:92891052-92891071 Msa0965490:intron 40.0%
! CCTTCTTCATATGTGTTGGT+GGG + chr6_3:92891053-92891072 Msa0965490:intron 40.0%
AAGGTTGAGGTAATCATCGA+TGG + chr6_3:92891085-92891104 Msa0965490:intron 40.0%
AACTGCTGGTGAACATAACA+AGG + chr6_3:92891120-92891139 Msa0965490:CDS 40.0%
CACAGTGTATTTCTTGAGCA+AGG - chr6_3:92891195-92891214 None:intergenic 40.0%
! CTGTTTTCTGCACAAATCCT+AGG + chr6_3:92891544-92891563 Msa0965490:intron 40.0%
TACTATAACTCTGTTCGGCA+AGG + chr6_3:92891947-92891966 Msa0965490:intron 40.0%
GTGTTTGGTAAAATTAGCGG+TGG - chr6_3:92892181-92892200 None:intergenic 40.0%
!! GCTACCTAGAATTTTGACGT+CGG + chr6_3:92892497-92892516 Msa0965490:intron 40.0%
GATCCTGTTGCGAGATATTA+TGG + chr6_3:92892519-92892538 Msa0965490:CDS 40.0%
AGTCCATAATATCTCGCAAC+AGG - chr6_3:92892525-92892544 None:intergenic 40.0%
! AGATATTATGGACTAAGGCG+TGG + chr6_3:92892531-92892550 Msa0965490:CDS 40.0%
GACAAGTTGTCAGGATTATC+CGG + chr6_3:92892553-92892572 Msa0965490:CDS 40.0%
AGAAAATAGAGTGCAATGGC+TGG + chr6_3:92892892-92892911 Msa0965490:intron 40.0%
GTCCCACAATCTTACTAAGT+TGG - chr6_3:92892929-92892948 None:intergenic 40.0%
CACAGGTAGCTGAATCATTA+GGG + chr6_3:92893233-92893252 Msa0965490:intron 40.0%
AGCAAAAGGGTCCTATAAGT+AGG + chr6_3:92893540-92893559 Msa0965490:intron 40.0%
GCAAAAGGGTCCTATAAGTA+GGG + chr6_3:92893541-92893560 Msa0965490:intron 40.0%
! AGTCTGCCTTGCACAATTTT+GGG - chr6_3:92894005-92894024 None:intergenic 40.0%
! TAGTCTGCCTTGCACAATTT+TGG - chr6_3:92894006-92894025 None:intergenic 40.0%
CAAGCTTAGCTACAACTGTA+CGG + chr6_3:92894038-92894057 Msa0965490:intron 40.0%
! TCGAAGGTGTAAATCTCGAA+CGG - chr6_3:92894086-92894105 None:intergenic 40.0%
GGTCTTAGTACCATATTCGA+AGG - chr6_3:92894102-92894121 None:intergenic 40.0%
ACACCATATTTGAGTGGTCT+CGG - chr6_3:92894180-92894199 None:intergenic 40.0%
GTGGTAACACCATATTTGAG+TGG - chr6_3:92894186-92894205 None:intergenic 40.0%
GTACTACGACCACTCAAATA+TGG + chr6_3:92894242-92894261 Msa0965490:intron 40.0%
GTGGTATCACCATATTTGAG+TGG - chr6_3:92894254-92894273 None:intergenic 40.0%
GAAGGGACATTAAACCGAAA+AGG + chr6_3:92894460-92894479 Msa0965490:intron 40.0%
TCGTCAACACAAGTCAAGAA+AGG + chr6_3:92894550-92894569 Msa0965490:intron 40.0%
CGTCAACACAAGTCAAGAAA+GGG + chr6_3:92894551-92894570 Msa0965490:intron 40.0%
AATCAGTTCAACGATACTGG+TGG + chr6_3:92894733-92894752 Msa0965490:intron 40.0%
!! GTTTGTTTCCTCCACTTTTG+TGG - chr6_3:92894780-92894799 None:intergenic 40.0%
TTATGCTCTCTTCTTAGCCT+AGG + chr6_3:92895126-92895145 Msa0965490:intron 40.0%
! AATAGAAGAGTAGAGTGCCT+AGG - chr6_3:92895146-92895165 None:intergenic 40.0%
!!! GGAATCTCCCTCTTTTTTCT+TGG + chr6_3:92895376-92895395 Msa0965490:intron 40.0%
! TATTATTTGTGTCGGCGTGT+CGG + chr6_3:92895594-92895613 Msa0965490:intron 40.0%
! TGGATTAGGGAAAAGTCCTT+AGG - chr6_3:92895658-92895677 None:intergenic 40.0%
ATGCTACACAACCTTAGATC+AGG + chr6_3:92895746-92895765 Msa0965490:intron 40.0%
! GTTAGGGTTAGGGATTTTTG+TGG - chr6_3:92896928-92896947 None:intergenic 40.0%
! CCATTGTTGTACTTTTGCGT+CGG - chr6_3:92897018-92897037 None:intergenic 40.0%
AGTTTCTGTCGGATAGCATT+TGG - chr6_3:92897093-92897112 None:intergenic 40.0%
TTCTCGAGACATGGTAAGTT+CGG - chr6_3:92897131-92897150 None:intergenic 40.0%
GATGAAATCTTCTCGAGACA+TGG - chr6_3:92888836-92888855 None:intergenic 40.0%
TTTCATGTGTTCGCCGTATT+TGG - chr6_3:92888860-92888879 None:intergenic 40.0%
ACACATGAAACGAGAACAGT+TGG + chr6_3:92897174-92897193 Msa0965490:CDS 40.0%
TAAGCGCCTTGAAGTCTTTA+TGG + chr6_3:92897399-92897418 Msa0965490:intron 40.0%
!! ATTATGAGTGTCGACGTATG+TGG - chr6_3:92897657-92897676 None:intergenic 40.0%
CTTCTGATTGAAGGTCAAAC+TGG - chr6_3:92897753-92897772 None:intergenic 40.0%
! TGACCTTCAATCAGAAGTGT+TGG + chr6_3:92897756-92897775 Msa0965490:intron 40.0%
CATGTGTAGGTTTAGGAAGA+AGG + chr6_3:92897800-92897819 Msa0965490:intron 40.0%
GTTTGAAAAAGGGCGATGAT+TGG + chr6_3:92897824-92897843 Msa0965490:intron 40.0%
! AAAAAGGGCGATGATTGGTT+AGG + chr6_3:92897829-92897848 Msa0965490:intron 40.0%
CAACACTTCTTATCGAAGGT+CGG - chr6_3:92898028-92898047 None:intergenic 40.0%
ACACCAACACTTCTTATCGA+AGG - chr6_3:92898032-92898051 None:intergenic 40.0%
ATAGCTTGATGTGTAGGTGT+TGG + chr6_3:92898069-92898088 Msa0965490:intron 40.0%
!! AAGAAGGTGTTTGAAAAGGG+TGG + chr6_3:92898092-92898111 Msa0965490:intron 40.0%
TGTTTGAAAAGGGTGGTGAT+TGG + chr6_3:92898099-92898118 Msa0965490:intron 40.0%
ATTAGGACACTGACACACAT+AGG + chr6_3:92898250-92898269 Msa0965490:intron 40.0%
! AAGCCTTCCATCAAAAGTGT+CGG + chr6_3:92898282-92898301 Msa0965490:intron 40.0%
!!! TATAGCACCGACACTTTTGA+TGG - chr6_3:92898292-92898311 None:intergenic 40.0%
GTAGCTTGATGTCTATGTGT+TGG + chr6_3:92898319-92898338 Msa0965490:intron 40.0%
GATGTCTATGTGTTGGAAGA+AGG + chr6_3:92898326-92898345 Msa0965490:intron 40.0%
GGTTCGAAAAGGATGATGAT+TGG + chr6_3:92898350-92898369 Msa0965490:intron 40.0%
AGTGAAACCAAGCATACACT+AGG + chr6_3:92898498-92898517 Msa0965490:intron 40.0%
AGATAATCGGTTAGAGAGGT+AGG + chr6_3:92898547-92898566 Msa0965490:intron 40.0%
ACCACTAATCCTATGGACAT+TGG + chr6_3:92898687-92898706 Msa0965490:intron 40.0%
ACCAATGTCCATAGGATTAG+TGG - chr6_3:92898691-92898710 None:intergenic 40.0%
TCTCATTCACCAATGTCCAT+AGG - chr6_3:92898699-92898718 None:intergenic 40.0%
GCTTTGTAGAAATCTGTGCA+AGG + chr6_3:92898934-92898953 Msa0965490:intron 40.0%
GCAAGGTTGCACATTATAGA+AGG + chr6_3:92898951-92898970 Msa0965490:intron 40.0%
TAGTTCTTCATGTGTGTTGG+TGG + chr6_3:92899063-92899082 Msa0965490:intron 40.0%
! AGTTCTTCATGTGTGTTGGT+GGG + chr6_3:92899064-92899083 Msa0965490:intron 40.0%
GATCCTGTTGCGAGATATTA+TGG + chr6_3:92892519-92892538 Msa0965490:CDS 40.0%
AGTCCATAATATCTCGCAAC+AGG - chr6_3:92892525-92892544 None:intergenic 40.0%
! AGATATTATGGACTAAGGCG+TGG + chr6_3:92892531-92892550 Msa0965490:CDS 40.0%
GACAAGTTGTCAGGATTATC+CGG + chr6_3:92892553-92892572 Msa0965490:CDS 40.0%
TTTATGCCAAGCATGCATAG+TGG + chr6_3:92899586-92899605 Msa0965490:intron 40.0%
ACTATTCCCTGTTTGTGTCT+TGG + chr6_3:92899774-92899793 Msa0965490:intron 40.0%
CATCATCCAAGACACAAACA+GGG - chr6_3:92899783-92899802 None:intergenic 40.0%
ACATCATCCAAGACACAAAC+AGG - chr6_3:92899784-92899803 None:intergenic 40.0%
! TCATCTTCTGAGAGCAATTG+AGG + chr6_3:92899921-92899940 Msa0965490:intron 40.0%
GAACGATTGAAATGCACACA+TGG - chr6_3:92900220-92900239 None:intergenic 40.0%
TTCTCGAGACATGGTGAGTT+CGG - chr6_3:92888827-92888846 None:intergenic 45.0%
TCATGTGTTCGCCGTATTTG+AGG - chr6_3:92888858-92888877 None:intergenic 45.0%
TAAGCGCCTTGAAGTCTTTC+TGG + chr6_3:92889095-92889114 Msa0965490:intron 45.0%
!! AAGGAGTGTCAGTGCTTCAT+AGG - chr6_3:92889315-92889334 None:intergenic 45.0%
CATGCTATGAAGCACGGATA+CGG - chr6_3:92889449-92889468 None:intergenic 45.0%
CTTAATTGATGTCGTAGGGG+TGG + chr6_3:92889577-92889596 Msa0965490:intron 45.0%
! GTAGGGGTGGTTCTTTTAGA+AGG + chr6_3:92889590-92889609 Msa0965490:intron 45.0%
!! TAGGTGGTGATGTGTTTTGG+TGG + chr6_3:92889690-92889709 Msa0965490:intron 45.0%
!!! AGGTGGTGATGTGTTTTGGT+GGG + chr6_3:92889691-92889710 Msa0965490:intron 45.0%
!!! TCTTCAGGGGTGTTTTTAGG+TGG + chr6_3:92889718-92889737 Msa0965490:intron 45.0%
!!! GGGGTGTTTTTAGGTGGTTA+TGG + chr6_3:92889724-92889743 Msa0965490:intron 45.0%
!! CAAATGGTGCCGCATATAGA+CGG - chr6_3:92889754-92889773 None:intergenic 45.0%
GCACTTACACTTCTGATGGA+AGG - chr6_3:92890143-92890162 None:intergenic 45.0%
TGTGGCACTTACACTTCTGA+TGG - chr6_3:92890147-92890166 None:intergenic 45.0%
AGAGCTTGATGTGTAGGTGT+TGG + chr6_3:92890176-92890195 Msa0965490:intron 45.0%
!! CTTGATGTGTAGGTGTTGGA+AGG + chr6_3:92890180-92890199 Msa0965490:intron 45.0%
TGTTGGACAGTGTCAGACAA+TGG + chr6_3:92890372-92890391 Msa0965490:intron 45.0%
GACACACTGTCCATAAGTGT+CGG + chr6_3:92890394-92890413 Msa0965490:intron 45.0%
!! TCCATAAGTGTCGGTGCTAT+AGG + chr6_3:92890403-92890422 Msa0965490:intron 45.0%
!! CCATAAGTGTCGGTGCTATA+GGG + chr6_3:92890404-92890423 Msa0965490:intron 45.0%
CAGTATTCATCCACCTGTGA+TGG - chr6_3:92890571-92890590 None:intergenic 45.0%
ACCACTAATCCTACGGACAA+TGG + chr6_3:92890639-92890658 Msa0965490:intron 45.0%
ACCATTGTCCGTAGGATTAG+TGG - chr6_3:92890643-92890662 None:intergenic 45.0%
ACTAATCCTACGGACAATGG+TGG + chr6_3:92890642-92890661 Msa0965490:intron 45.0%
TCTTATCCACCATTGTCCGT+AGG - chr6_3:92890651-92890670 None:intergenic 45.0%
CCCACCAACACATATGAAGA+AGG - chr6_3:92891056-92891075 None:intergenic 45.0%
! TCTTCATATGTGTTGGTGGG+TGG + chr6_3:92891056-92891075 Msa0965490:intron 45.0%
! TGTTGGTGGGTGGTTCTTTA+AGG + chr6_3:92891066-92891085 Msa0965490:intron 45.0%
!! TGGGTGGTTCTTTAAGGTTG+AGG + chr6_3:92891072-92891091 Msa0965490:intron 45.0%
AACACTGCACTCTGCACATA+AGG - chr6_3:92891498-92891517 None:intergenic 45.0%
TACGCTAAAAGCTAGCGGTT+TGG - chr6_3:92891973-92891992 None:intergenic 45.0%
CCTGATACGCTAAAAGCTAG+CGG - chr6_3:92891978-92891997 None:intergenic 45.0%
TTTGGTATAGTGTGGGATGG+TGG - chr6_3:92892228-92892247 None:intergenic 45.0%
CTGTTTGGTATAGTGTGGGA+TGG - chr6_3:92892231-92892250 None:intergenic 45.0%
GGGTCTGTTTGGTATAGTGT+GGG - chr6_3:92892235-92892254 None:intergenic 45.0%
AGGGTCTGTTTGGTATAGTG+TGG - chr6_3:92892236-92892255 None:intergenic 45.0%
GTGCAAACTTAGGGTCTGTT+TGG - chr6_3:92892246-92892265 None:intergenic 45.0%
GCTAAGACAAGTGAAAGGCA+AGG - chr6_3:92892305-92892324 None:intergenic 45.0%
GGATCCGACGTCAAAATTCT+AGG - chr6_3:92892504-92892523 None:intergenic 45.0%
CCAAGACACAAACAGGGAAT+AGG - chr6_3:92892793-92892812 None:intergenic 45.0%
CCTATTCCCTGTTTGTGTCT+TGG + chr6_3:92892790-92892809 Msa0965490:intron 45.0%
!!! TAGAGTGCAATGGCTGGTTT+TGG + chr6_3:92892898-92892917 Msa0965490:intron 45.0%
GCACAGGTAGCTGAATCATT+AGG + chr6_3:92893232-92893251 Msa0965490:intron 45.0%
AAGGGTCCTATAAGTAGGGA+CGG + chr6_3:92893545-92893564 Msa0965490:intron 45.0%
! TAATAGGTTGAGTCACGACC+AGG + chr6_3:92893949-92893968 Msa0965490:intron 45.0%
!! GCTCTCTTTAAGACGTTTCG+TGG + chr6_3:92893974-92893993 Msa0965490:intron 45.0%
GCACTACCCAAAATTGTGCA+AGG + chr6_3:92893996-92894015 Msa0965490:intron 45.0%
! GGTGTGTCTTTTGAACTGAG+TGG + chr6_3:92894615-92894634 Msa0965490:intron 45.0%
! GTTCAACGATACTGGTGGAT+AGG + chr6_3:92894738-92894757 Msa0965490:intron 45.0%
GAGCATAAGCTAGATTAGGG+AGG - chr6_3:92895114-92895133 None:intergenic 45.0%
AGCTATGAAGCACGAACACT+CGG + chr6_3:92895477-92895496 Msa0965490:intron 45.0%
ATGCAACACGTATCTGACAC+CGG - chr6_3:92895515-92895534 None:intergenic 45.0%
!! TGTTGGTGTCGTGTTCGTAT+TGG - chr6_3:92895538-92895557 None:intergenic 45.0%
TCTATGAAGCACGGATACGA+CGG - chr6_3:92895635-92895654 None:intergenic 45.0%
ATCCGTGCTTCATAGACCTA+AGG + chr6_3:92895639-92895658 Msa0965490:intron 45.0%
GTCCTTAGGTCTATGAAGCA+CGG - chr6_3:92895644-92895663 None:intergenic 45.0%
CTCGAGGATAAGCTGGATTA+GGG - chr6_3:92895671-92895690 None:intergenic 45.0%
ACTCGAGGATAAGCTGGATT+AGG - chr6_3:92895672-92895691 None:intergenic 45.0%
TAAAGGACTCGAGGATAAGC+TGG - chr6_3:92895678-92895697 None:intergenic 45.0%
GATCAGGACCATATGTTTCG+TGG + chr6_3:92895762-92895781 Msa0965490:intron 45.0%
! GTTAGGGATTTTTGTGGGTC+GGG - chr6_3:92896922-92896941 None:intergenic 45.0%
! GGTTAGGGATTTTTGTGGGT+CGG - chr6_3:92896923-92896942 None:intergenic 45.0%
! CCGACGCAAAAGTACAACAA+TGG + chr6_3:92897015-92897034 Msa0965490:intron 45.0%
GTTGCTGGAATGAGTTCAGT+TGG + chr6_3:92897373-92897392 Msa0965490:CDS 45.0%
!! ATAGCTACGAAGCACTGACA+CGG + chr6_3:92897463-92897482 Msa0965490:intron 45.0%
TCACATGTGTCATGCTGTGT+TGG + chr6_3:92897620-92897639 Msa0965490:intron 45.0%
GCACCAACACTTCTGATTGA+AGG - chr6_3:92897762-92897781 None:intergenic 45.0%
TCACATGTGTCATGCTGTGT+CGG + chr6_3:92897620-92897639 Msa0965490:intron 45.0%
! CGACCTTCGATAAGAAGTGT+TGG + chr6_3:92898026-92898045 Msa0965490:intron 45.0%
!! GATGTGTAGGTGTTGGAAGA+AGG + chr6_3:92898076-92898095 Msa0965490:intron 45.0%
TGGGATTGCACGTGTCTATT+AGG + chr6_3:92898233-92898252 Msa0965490:intron 45.0%
CACTGACACACATAGGACAA+CGG + chr6_3:92898257-92898276 Msa0965490:intron 45.0%
ACTGACACACATAGGACAAC+GGG + chr6_3:92898258-92898277 Msa0965490:intron 45.0%
!! AGTGTCGGTGCTATAGTGTT+AGG + chr6_3:92898297-92898316 Msa0965490:intron 45.0%
GTCTATGTGTTGGAAGAAGG+TGG + chr6_3:92898329-92898348 Msa0965490:intron 45.0%
TGGAAGAAGGTGGTTCGAAA+AGG + chr6_3:92898339-92898358 Msa0965490:intron 45.0%
!!! TGTTGGTGGGCGGTTTTTTA+AGG + chr6_3:92899077-92899096 Msa0965490:intron 45.0%
!!! TGGGCGGTTTTTTAAGGTTG+AGG + chr6_3:92899083-92899102 Msa0965490:intron 45.0%
GACAGTGTATCTCTTGAGCA+AGG - chr6_3:92899206-92899225 None:intergenic 45.0%
TTAGGTAGCTGAGAAGCAGA+CGG - chr6_3:92899427-92899446 None:intergenic 45.0%
GAGAGCAATTGAGGTTGAAC+CGG + chr6_3:92899930-92899949 Msa0965490:intron 45.0%
!!! AAATTTTTTTTTTTTTGAAT+CGG - chr6_3:92889832-92889851 None:intergenic 5.0%
!! ATTAAAAATAAATATAAAGA+AGG - chr6_3:92891244-92891263 None:intergenic 5.0%
!! AAAAATATGTATAATAAATA+GGG - chr6_3:92893390-92893409 None:intergenic 5.0%
!!! ATAAATAGTATATTTAAAAT+TGG - chr6_3:92895174-92895193 None:intergenic 5.0%
!! TAAAAAATAAATATAAATCA+GGG - chr6_3:92896761-92896780 None:intergenic 5.0%
!! TTAAAAAATAAATATAAATC+AGG - chr6_3:92896762-92896781 None:intergenic 5.0%
!!! GTTTTTATTTTATTTTTTTA+AGG - chr6_3:92896815-92896834 None:intergenic 5.0%
!! ATTAAAAATAAATATAAAGA+AGG - chr6_3:92891244-92891263 None:intergenic 5.0%
!! TGAGTTCGGTGTCTTCGACA+AGG - chr6_3:92888813-92888832 None:intergenic 50.0%
! GCACTGACACTCCTTCGATT+AGG + chr6_3:92889320-92889339 Msa0965490:intron 50.0%
TCCTTCGATTAGGTGTGTCC+CGG + chr6_3:92889330-92889349 Msa0965490:intron 50.0%
! ATTAGCGGTGTCAGAGTGTC+CGG + chr6_3:92889420-92889439 Msa0965490:intron 50.0%
!! CCCTATAGCACCGACACTTA+TGG - chr6_3:92890407-92890426 None:intergenic 50.0%
!! GTCGGTGCTATAGGGTTAGA+TGG + chr6_3:92890412-92890431 Msa0965490:intron 50.0%
AATTTCTGCCACGTGTCACC+AGG + chr6_3:92890983-92891002 Msa0965490:intron 50.0%
GAGGTAATCATCGATGGTGC+AGG + chr6_3:92891091-92891110 Msa0965490:intron 50.0%
GTAATCATCGATGGTGCAGG+AGG + chr6_3:92891094-92891113 Msa0965490:intron 50.0%
CAAGGCTTTCTTCTCAGCGT+CGG - chr6_3:92891177-92891196 None:intergenic 50.0%
!!! CCGCTAGCTTTTAGCGTATC+AGG + chr6_3:92891975-92891994 Msa0965490:intron 50.0%
CTAGGTAGCTGAGAAGCAGA+CGG - chr6_3:92892486-92892505 None:intergenic 50.0%
TAAGGCGTGGACAAGTTGTC+AGG + chr6_3:92892544-92892563 Msa0965490:CDS 50.0%
CTACCTCCGTCCCTACTTAT+AGG - chr6_3:92893554-92893573 None:intergenic 50.0%
ACGTCTTAAAGAGAGCGACC+TGG - chr6_3:92893970-92893989 None:intergenic 50.0%
TTGTGCAAGGCAGACTATCC+AGG + chr6_3:92894009-92894028 Msa0965490:intron 50.0%
GTGCCGAGACCACTCAAATA+TGG + chr6_3:92894174-92894193 Msa0965490:intron 50.0%
! CACTCGGATTAGACGTATCC+CGG + chr6_3:92895493-92895512 Msa0965490:intron 50.0%
TGCAACACGTATCTGACACC+GGG - chr6_3:92895514-92895533 None:intergenic 50.0%
CTATGAAGCACGGATACGAC+GGG - chr6_3:92895634-92895653 None:intergenic 50.0%
GTCGACGAGGTAGTTTCTGT+CGG - chr6_3:92897104-92897123 None:intergenic 50.0%
TCTGCGAGTAAAGCTGTTGC+TGG + chr6_3:92897358-92897377 Msa0965490:CDS 50.0%
CTTCTTATCGAAGGTCGGAC+TGG - chr6_3:92898023-92898042 None:intergenic 50.0%
!! GCACCGACACTTTTGATGGA+AGG - chr6_3:92898288-92898307 None:intergenic 50.0%
! TCTTCATGTGTGTTGGTGGG+CGG + chr6_3:92899067-92899086 Msa0965490:intron 50.0%
AAGGTTGAGGTAATCGTCGG+TGG + chr6_3:92899096-92899115 Msa0965490:intron 50.0%
CAAGGCTTTCTTCTCAGCGT+CGG - chr6_3:92891177-92891196 None:intergenic 50.0%
TAAGGCGTGGACAAGTTGTC+AGG + chr6_3:92892544-92892563 Msa0965490:CDS 50.0%
TATGTGCCTGCAGTCTCACT+TGG - chr6_3:92899520-92899539 None:intergenic 50.0%
! TTAGAGAGCATAAGCTGGGG+AGG - chr6_3:92900298-92900317 None:intergenic 50.0%
CCTTCGATTAGGTGTGTCCC+GGG + chr6_3:92889331-92889350 Msa0965490:intron 55.0%
! TCTTGTCGGTGTCTGACACC+CGG - chr6_3:92889352-92889371 None:intergenic 55.0%
TGAAGCACGGATACGGACAC+CGG - chr6_3:92889442-92889461 None:intergenic 55.0%
CGTCCATACCTTGCGTCTTG+CGG + chr6_3:92889784-92889803 Msa0965490:intron 55.0%
GTCCATACCTTGCGTCTTGC+GGG + chr6_3:92889785-92889804 Msa0965490:intron 55.0%
TCCATACCTTGCGTCTTGCG+GGG + chr6_3:92889786-92889805 Msa0965490:intron 55.0%
! GGAATTGCGTGTGTCGGTGT+TGG + chr6_3:92890355-92890374 Msa0965490:intron 55.0%
CGAACGTGTACCTCCACATC+AGG + chr6_3:92891145-92891164 Msa0965490:CDS 55.0%
TCGGTGAGAACCTGATGTGG+AGG - chr6_3:92891158-92891177 None:intergenic 55.0%
TATGTGCCTGCGGTCTCACT+TGG - chr6_3:92892579-92892598 None:intergenic 55.0%
GGTCCTATAAGTAGGGACGG+AGG + chr6_3:92893548-92893567 Msa0965490:intron 55.0%
GTCTCGGCACCATAACAGAG+TGG - chr6_3:92894164-92894183 None:intergenic 55.0%
!! TAAGTTCGGTGTCGTCGACG+AGG - chr6_3:92897117-92897136 None:intergenic 55.0%
!! TGAGTGTCGACGTATGTGGC+TGG - chr6_3:92897653-92897672 None:intergenic 55.0%
! GTGTCATGCTGTGTCGGTGT+TGG + chr6_3:92897982-92898001 Msa0965490:intron 55.0%
TCGGTGAGAACCTGATGTGG+AGG - chr6_3:92891158-92891177 None:intergenic 55.0%
ACATGCACGGGTAAGGAAGC+CGG - chr6_3:92899952-92899971 None:intergenic 55.0%
CCCGGGACACACCTAATCGA+AGG - chr6_3:92889334-92889353 None:intergenic 60.0%
! CTTGTCGGTGTCTGACACCC+GGG - chr6_3:92889351-92889370 None:intergenic 60.0%
TCCCCGCAAGACGCAAGGTA+TGG - chr6_3:92889790-92889809 None:intergenic 60.0%
GGTGCAGGAGGATGAACTGC+TGG + chr6_3:92891106-92891125 Msa0965490:intron 60.0%
! GCGTCGGTGAGAACCTGATG+TGG - chr6_3:92891161-92891180 None:intergenic 60.0%
! TCGAAGGTCGGACTGGACAC+AGG - chr6_3:92898016-92898035 None:intergenic 60.0%
GAGGTAATCGTCGGTGGTGC+AGG + chr6_3:92899102-92899121 Msa0965490:intron 60.0%
GTAATCGTCGGTGGTGCAGG+AGG + chr6_3:92899105-92899124 Msa0965490:intron 60.0%
GGTGCAGGAGGATGAACTGC+TGG + chr6_3:92891106-92891125 Msa0965490:intron 60.0%
CGAGCGTGTACCTCCACATC+AGG + chr6_3:92899156-92899175 Msa0965490:CDS 60.0%
! GCGTCGGTGAGAACCTGATG+TGG - chr6_3:92891161-92891180 None:intergenic 60.0%
ATCCGGCCAAGTGAGACTGC+AGG + chr6_3:92899511-92899530 Msa0965490:intron 60.0%
TGCCTGCAGTCTCACTTGGC+CGG - chr6_3:92899516-92899535 None:intergenic 60.0%
CGTCATCCCCGCAAGACGCA+AGG - chr6_3:92889795-92889814 None:intergenic 65.0%
ATCCGGCCAAGTGAGACCGC+AGG + chr6_3:92892570-92892589 Msa0965490:intron 65.0%
TGCCTGCGGTCTCACTTGGC+CGG - chr6_3:92892575-92892594 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 92888730 92900317 92888730 ID=Msa0965490;Name=Msa0965490
chr6_3 mRNA 92888730 92900317 92888730 ID=Msa0965490-mRNA-1;Parent=Msa0965490;Name=Msa0965490-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.25|0.11|0.88|0.25|0.33|9|0|375
chr6_3 exon 92888730 92888966 92888730 ID=Msa0965490-mRNA-1:exon:16976;Parent=Msa0965490-mRNA-1
chr6_3 exon 92888973 92889107 92888973 ID=Msa0965490-mRNA-1:exon:16977;Parent=Msa0965490-mRNA-1
chr6_3 exon 92891113 92891226 92891113 ID=Msa0965490-mRNA-1:exon:16978;Parent=Msa0965490-mRNA-1
chr6_3 exon 92892498 92892579 92892498 ID=Msa0965490-mRNA-1:exon:16979;Parent=Msa0965490-mRNA-1
chr6_3 exon 92897050 92897268 92897050 ID=Msa0965490-mRNA-1:exon:16980;Parent=Msa0965490-mRNA-1
chr6_3 exon 92897287 92897411 92897287 ID=Msa0965490-mRNA-1:exon:16981;Parent=Msa0965490-mRNA-1
chr6_3 exon 92899124 92899237 92899124 ID=Msa0965490-mRNA-1:exon:16982;Parent=Msa0965490-mRNA-1
chr6_3 exon 92899439 92899498 92899439 ID=Msa0965490-mRNA-1:exon:16983;Parent=Msa0965490-mRNA-1
chr6_3 exon 92900276 92900317 92900276 ID=Msa0965490-mRNA-1:exon:16984;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92888730 92888966 92888730 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92888973 92889107 92888973 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92891113 92891226 92891113 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92892498 92892579 92892498 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92897050 92897268 92897050 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92897287 92897411 92897287 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92899124 92899237 92899124 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92899439 92899498 92899439 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
chr6_3 CDS 92900276 92900317 92900276 ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1
Gene Sequence

>Msa0965490

ATGGTGTTTTCCGAAGAAGACATAACAAAACTCTACAGAATCCAAAAAACCCTTCTCCAAATGTTATCCGACAGAAACTACCTTGTCGAAGACACCGAACTCACCATGTCTCGAGAAGATTTCATCCTCAAATACGGCGAACACATGAAACGAGAACAATTGGAAATCACCAAAACTCACAGAAACAACCCATCTGAAAAAATCTGCGTGTTCTTCTCTGATGATGCTAAACTTGGTATTGTTAGAGGTTTTATTACCAGGATGTTGAACGAGAATGTTGATAATGGGATTTTGGTTTGTCAGAATAAATTAAATCATTATGCTAGAAGTGCTGTTGCTGAAATGAGTTCTGTTGGTTCTAAGCGCCTTGAAGAGGATGAACTGCTGGTGAACATAACAAGGCACGAACGTGTACCTCCACATCAGGTTCTCACCGACGCTGAGAAGAAAGCCTTGCTCAAGAAATACACTGTGAAAGATACTCAGCTACCTAGAATTTTGACGTCGGATCCTGTTGCGAGATATTATGGACTAAGGCGTGGACAAGTTGTCAGGATTATCCGGCCAAAAGACATAACAAAACTATACAGAATTCGCAAAACACTTCTCCAAATGCTATCCGACAGAAACTACCTCGTCGACGACACCGAACTTACCATGTCTCGAGAAGATTTCATCTCCAAATACGGCGAACACATGAAACGAGAACAGTTGGAAATCAACAAAACACATAGAAACAACCCATCTGAAAAAATCTGTGTGTTCTTCTCTGATAATGCTAAACTTGGTATTATTACTAGGATGTTGAAGGAGAATGTTGATAATGGGATTATGGTTTGTCAGAATAAATTATCTTCTTCTGCGAGTAAAGCTGTTGCTGGAATGAGTTCAGTTGGTTCTAAGCGCCTTGAAGAGGATGAACTGCTGGTGAACATAACAAAGCACGAGCGTGTACCTCCACATCAGGTTCTCACCGACGCTGAGAAGAAAGCCTTGCTCAAGAGATACACTGTCAAAGATACTCAGCTACCTAAAATTTTGACGAATGATCCTGTTGCGAGATATTATGGACTAAGGCGTGGACAATTTTCACTCAAGGGATTCTCCTCCCCAGCTTATGCTCTCTAA

Protein sequence

>Msa0965490

MVFSEEDITKLYRIQKTLLQMLSDRNYLVEDTELTMSREDFILKYGEHMKREQLEITKTHRNNPSEKICVFFSDDAKLGIVRGFITRMLNENVDNGILVCQNKLNHYARSAVAEMSSVGSKRLEEDELLVNITRHERVPPHQVLTDAEKKALLKKYTVKDTQLPRILTSDPVARYYGLRRGQVVRIIRPKDITKLYRIRKTLLQMLSDRNYLVDDTELTMSREDFISKYGEHMKREQLEINKTHRNNPSEKICVFFSDNAKLGIITRMLKENVDNGIMVCQNKLSSSASKAVAGMSSVGSKRLEEDELLVNITKHERVPPHQVLTDAEKKALLKRYTVKDTQLPKILTNDPVARYYGLRRGQFSLKGFSSPAYAL*