Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0965490 | sp|O81098|RPB5A_ARATH | 51.010 | 198 | 94 | 2 | 2 | 196 | 1 | 198 | 2.75e-64 | 206 |
Msa0965490 | sp|O81098|RPB5A_ARATH | 49.444 | 180 | 84 | 2 | 190 | 362 | 5 | 184 | 2.25e-52 | 176 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0965490 | G7KPG3 | 80.645 | 186 | 27 | 2 | 186 | 362 | 2 | 187 | 1.50e-100 | 306 |
Msa0965490 | G7KPG3 | 88.557 | 201 | 18 | 2 | 1 | 196 | 1 | 201 | 3.12e-123 | 363 |
Gene ID | Type | Classification |
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Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003890 | Msa0965490 | 0.843683 | 1.205181e-58 | -8.615850e-47 |
Msa0006070 | Msa0965490 | 0.820139 | 8.033452e-53 | -8.615850e-47 |
Msa0011960 | Msa0965490 | 0.823219 | 1.558242e-53 | -8.615850e-47 |
Msa0017510 | Msa0965490 | 0.827314 | 1.675183e-54 | -8.615850e-47 |
Msa0028640 | Msa0965490 | 0.816932 | 4.284642e-52 | -8.615850e-47 |
Msa0032580 | Msa0965490 | 0.800798 | 1.217187e-48 | -8.615850e-47 |
Msa0050390 | Msa0965490 | 0.813261 | 2.798783e-51 | -8.615850e-47 |
Msa0052730 | Msa0965490 | 0.809386 | 1.941891e-50 | -8.615850e-47 |
Msa0054480 | Msa0965490 | 0.817988 | 2.478014e-52 | -8.615850e-47 |
Msa0078900 | Msa0965490 | 0.803875 | 2.829243e-49 | -8.615850e-47 |
Msa0084380 | Msa0965490 | 0.800961 | 1.127473e-48 | -8.615850e-47 |
Msa0089630 | Msa0965490 | 0.804631 | 1.969102e-49 | -8.615850e-47 |
Msa0114060 | Msa0965490 | 0.834317 | 3.213958e-56 | -8.615850e-47 |
Msa0115270 | Msa0965490 | 0.808870 | 2.504516e-50 | -8.615850e-47 |
Msa0607050 | Msa0965490 | 0.808550 | 2.930930e-50 | -8.615850e-47 |
Msa0610430 | Msa0965490 | 0.826489 | 2.637217e-54 | -8.615850e-47 |
Msa0615710 | Msa0965490 | 0.812383 | 4.359532e-51 | -8.615850e-47 |
Msa0617640 | Msa0965490 | 0.807427 | 5.080657e-50 | -8.615850e-47 |
Msa0625720 | Msa0965490 | 0.820543 | 6.487992e-53 | -8.615850e-47 |
Msa0657580 | Msa0965490 | 0.805357 | 1.388100e-49 | -8.615850e-47 |
Msa0661190 | Msa0965490 | -0.811900 | 5.554731e-51 | -8.615850e-47 |
Msa0661650 | Msa0965490 | 0.816000 | 6.929557e-52 | -8.615850e-47 |
Msa0663390 | Msa0965490 | 0.827831 | 1.258915e-54 | -8.615850e-47 |
Msa0688480 | Msa0965490 | 0.809388 | 1.939233e-50 | -8.615850e-47 |
Msa0698770 | Msa0965490 | 0.807535 | 4.820342e-50 | -8.615850e-47 |
Msa0698920 | Msa0965490 | 0.810196 | 1.299741e-50 | -8.615850e-47 |
Msa0709400 | Msa0965490 | 0.802968 | 4.360213e-49 | -8.615850e-47 |
Msa0709500 | Msa0965490 | 0.803642 | 3.161997e-49 | -8.615850e-47 |
Msa0715700 | Msa0965490 | 0.820264 | 7.520000e-53 | -8.615850e-47 |
Msa0716840 | Msa0965490 | 0.820441 | 6.847943e-53 | -8.615850e-47 |
Msa0731940 | Msa0965490 | 0.804855 | 1.767593e-49 | -8.615850e-47 |
Msa0735170 | Msa0965490 | 0.816114 | 6.532784e-52 | -8.615850e-47 |
Msa0743720 | Msa0965490 | 0.830744 | 2.471762e-55 | -8.615850e-47 |
Msa0745790 | Msa0965490 | 0.806757 | 7.044868e-50 | -8.615850e-47 |
Msa0769920 | Msa0965490 | 0.804121 | 2.515136e-49 | -8.615850e-47 |
Msa0793800 | Msa0965490 | 0.814705 | 1.344750e-51 | -8.615850e-47 |
Msa0796530 | Msa0965490 | 0.822197 | 2.695049e-53 | -8.615850e-47 |
Msa0808270 | Msa0965490 | 0.827134 | 1.850417e-54 | -8.615850e-47 |
Msa0820850 | Msa0965490 | 0.802978 | 4.341238e-49 | -8.615850e-47 |
Msa0123360 | Msa0965490 | 0.805155 | 1.530205e-49 | -8.615850e-47 |
Msa0127050 | Msa0965490 | 0.810093 | 1.368038e-50 | -8.615850e-47 |
Msa0139060 | Msa0965490 | 0.800315 | 1.526947e-48 | -8.615850e-47 |
Msa0142660 | Msa0965490 | 0.801283 | 9.685679e-49 | -8.615850e-47 |
Msa0145440 | Msa0965490 | 0.811267 | 7.626311e-51 | -8.615850e-47 |
Msa0150820 | Msa0965490 | 0.831022 | 2.112500e-55 | -8.615850e-47 |
Msa0157290 | Msa0965490 | 0.828320 | 9.596688e-55 | -8.615850e-47 |
Msa0160550 | Msa0965490 | 0.838255 | 3.206438e-57 | -8.615850e-47 |
Msa0171540 | Msa0965490 | 0.817618 | 3.004270e-52 | -8.615850e-47 |
Msa0172450 | Msa0965490 | 0.802933 | 4.435097e-49 | -8.615850e-47 |
Msa0178590 | Msa0965490 | 0.808526 | 2.966217e-50 | -8.615850e-47 |
Msa0178640 | Msa0965490 | 0.814565 | 1.444338e-51 | -8.615850e-47 |
Msa0187120 | Msa0965490 | 0.804472 | 2.124832e-49 | -8.615850e-47 |
Msa0205230 | Msa0965490 | 0.803577 | 3.261818e-49 | -8.615850e-47 |
Msa0211150 | Msa0965490 | 0.803832 | 2.887266e-49 | -8.615850e-47 |
Msa0220740 | Msa0965490 | 0.816558 | 5.197685e-52 | -8.615850e-47 |
Msa0222890 | Msa0965490 | 0.818347 | 2.055682e-52 | -8.615850e-47 |
Msa0228070 | Msa0965490 | 0.827769 | 1.302836e-54 | -8.615850e-47 |
Msa0229380 | Msa0965490 | 0.805172 | 1.517522e-49 | -8.615850e-47 |
Msa0232050 | Msa0965490 | 0.801024 | 1.094554e-48 | -8.615850e-47 |
Msa0385580 | Msa0965490 | 0.821814 | 3.304452e-53 | -8.615850e-47 |
Msa0388950 | Msa0965490 | 0.801610 | 8.302757e-49 | -8.615850e-47 |
Msa0402290 | Msa0965490 | 0.808663 | 2.772767e-50 | -8.615850e-47 |
Msa0402650 | Msa0965490 | 0.804915 | 1.717769e-49 | -8.615850e-47 |
Msa0402790 | Msa0965490 | 0.834375 | 3.109053e-56 | -8.615850e-47 |
Msa0479660 | Msa0965490 | 0.816654 | 4.948076e-52 | -8.615850e-47 |
Msa0481530 | Msa0965490 | 0.826089 | 3.284941e-54 | -8.615850e-47 |
Msa0257460 | Msa0965490 | 0.829333 | 5.459823e-55 | -8.615850e-47 |
Msa0271530 | Msa0965490 | 0.800913 | 1.153270e-48 | -8.615850e-47 |
Msa0279790 | Msa0965490 | 0.822094 | 2.846098e-53 | -8.615850e-47 |
Msa0280090 | Msa0965490 | 0.828760 | 7.515733e-55 | -8.615850e-47 |
Msa0299870 | Msa0965490 | 0.813392 | 2.619459e-51 | -8.615850e-47 |
Msa0309750 | Msa0965490 | 0.801630 | 8.223848e-49 | -8.615850e-47 |
Msa0319170 | Msa0965490 | 0.805857 | 1.090353e-49 | -8.615850e-47 |
Msa0336420 | Msa0965490 | 0.815136 | 1.079113e-51 | -8.615850e-47 |
Msa0337620 | Msa0965490 | 0.815153 | 1.069438e-51 | -8.615850e-47 |
Msa0345970 | Msa0965490 | 0.809707 | 1.656165e-50 | -8.615850e-47 |
Msa0497210 | Msa0965490 | 0.800943 | 1.136823e-48 | -8.615850e-47 |
Msa0529040 | Msa0965490 | 0.814510 | 1.485028e-51 | -8.615850e-47 |
Msa0529890 | Msa0965490 | 0.819567 | 1.085395e-52 | -8.615850e-47 |
Msa0545700 | Msa0965490 | 0.806044 | 9.957927e-50 | -8.615850e-47 |
Msa0547320 | Msa0965490 | 0.820326 | 7.275941e-53 | -8.615850e-47 |
Msa0555450 | Msa0965490 | 0.806778 | 6.972122e-50 | -8.615850e-47 |
Msa0585560 | Msa0965490 | 0.819855 | 9.326268e-53 | -8.615850e-47 |
Msa0592440 | Msa0965490 | 0.816735 | 4.744979e-52 | -8.615850e-47 |
Msa0597330 | Msa0965490 | 0.800192 | 1.617302e-48 | -8.615850e-47 |
Msa0861130 | Msa0965490 | 0.800204 | 1.608388e-48 | -8.615850e-47 |
Msa0866550 | Msa0965490 | 0.808712 | 2.706375e-50 | -8.615850e-47 |
Msa0871270 | Msa0965490 | 0.825519 | 4.484796e-54 | -8.615850e-47 |
Msa0878500 | Msa0965490 | 0.807757 | 4.324659e-50 | -8.615850e-47 |
Msa0880140 | Msa0965490 | 0.822545 | 2.236687e-53 | -8.615850e-47 |
Msa0902760 | Msa0965490 | 0.803437 | 3.487959e-49 | -8.615850e-47 |
Msa0938220 | Msa0965490 | 0.827739 | 1.324505e-54 | -8.615850e-47 |
Msa0944190 | Msa0965490 | 0.805483 | 1.306238e-49 | -8.615850e-47 |
Msa0947660 | Msa0965490 | 0.825317 | 5.007465e-54 | -8.615850e-47 |
Msa0959360 | Msa0965490 | 0.826321 | 2.892953e-54 | -8.615850e-47 |
Msa0963270 | Msa0965490 | 0.811818 | 5.786914e-51 | -8.615850e-47 |
Msa0965490 | Msa0968680 | 0.814196 | 1.742144e-51 | -8.615850e-47 |
Msa0965490 | Msa0969810 | 0.812545 | 4.017564e-51 | -8.615850e-47 |
Msa0965490 | Msa0974070 | 0.802669 | 5.028496e-49 | -8.615850e-47 |
Msa0965490 | Msa0993290 | 0.803380 | 3.583285e-49 | -8.615850e-47 |
Msa0965490 | Msa0994950 | 0.814981 | 1.167742e-51 | -8.615850e-47 |
Msa0965490 | Msa0995270 | 0.806188 | 9.285832e-50 | -8.615850e-47 |
Msa0965490 | Msa0997980 | 0.813208 | 2.874718e-51 | -8.615850e-47 |
Msa0965490 | Msa0998690 | 0.803364 | 3.611243e-49 | -8.615850e-47 |
Msa0965490 | Msa0999970 | 0.850258 | 1.907622e-60 | -8.615850e-47 |
Msa0965490 | Msa1003620 | 0.814428 | 1.548777e-51 | -8.615850e-47 |
Msa0965490 | Msa1013400 | 0.802056 | 6.724021e-49 | -8.615850e-47 |
Msa0965490 | Msa1014540 | 0.837116 | 6.283041e-57 | -8.615850e-47 |
Msa0965490 | Msa1046460 | 0.801135 | 1.038790e-48 | -8.615850e-47 |
Msa0965490 | Msa1079590 | 0.807628 | 4.606007e-50 | -8.615850e-47 |
Msa0965490 | Msa1081980 | 0.813113 | 3.017404e-51 | -8.615850e-47 |
Msa0965490 | Msa1087710 | 0.836184 | 1.085575e-56 | -8.615850e-47 |
Msa0965490 | Msa1093530 | 0.805290 | 1.433682e-49 | -8.615850e-47 |
Msa0965490 | Msa1100050 | 0.800238 | 1.582576e-48 | -8.615850e-47 |
Msa0965490 | Msa1109680 | 0.803009 | 4.276798e-49 | -8.615850e-47 |
Msa0965490 | Msa1124960 | 0.805575 | 1.249628e-49 | -8.615850e-47 |
Msa0965490 | Msa1131220 | 0.805974 | 1.029917e-49 | -8.615850e-47 |
Msa0965490 | Msa1135470 | 0.812834 | 3.472332e-51 | -8.615850e-47 |
Msa0965490 | Msa1137570 | 0.801464 | 8.893422e-49 | -8.615850e-47 |
Msa0965490 | Msa1147900 | 0.816165 | 6.365633e-52 | -8.615850e-47 |
Msa0965490 | Msa1154280 | 0.807451 | 5.022018e-50 | -8.615850e-47 |
Msa0965490 | Msa1162270 | 0.801262 | 9.782129e-49 | -8.615850e-47 |
Msa0965490 | Msa1171360 | 0.802760 | 4.813763e-49 | -8.615850e-47 |
Msa0965490 | Msa1173100 | 0.801655 | 8.128713e-49 | -8.615850e-47 |
Msa0965490 | Msa1174040 | 0.808897 | 2.471201e-50 | -8.615850e-47 |
Msa0965490 | Msa1186950 | -0.806841 | 6.763140e-50 | -8.615850e-47 |
Msa0965490 | Msa1210020 | 0.814032 | 1.893769e-51 | -8.615850e-47 |
Msa0965490 | Msa1244250 | 0.809864 | 1.532428e-50 | -8.615850e-47 |
Msa0965490 | Msa1246510 | 0.808575 | 2.895193e-50 | -8.615850e-47 |
Msa0965490 | Msa1252140 | 0.807101 | 5.958721e-50 | -8.615850e-47 |
Msa0965490 | Msa1253020 | 0.832370 | 9.828211e-56 | -8.615850e-47 |
Msa0965490 | Msa1275360 | 0.811626 | 6.373475e-51 | -8.615850e-47 |
Msa0965490 | Msa1277660 | 0.808293 | 3.326150e-50 | -8.615850e-47 |
Msa0965490 | Msa1282580 | -0.815287 | 9.985719e-52 | -8.615850e-47 |
Msa0965490 | Msa1284680 | 0.813386 | 2.627665e-51 | -8.615850e-47 |
Msa0965490 | Msa1294820 | 0.806223 | 9.131454e-50 | -8.615850e-47 |
Msa0965490 | Msa1298510 | 0.811642 | 6.322070e-51 | -8.615850e-47 |
Msa0965490 | Msa1305340 | 0.807394 | 5.165012e-50 | -8.615850e-47 |
Msa0965490 | Msa1309030 | 0.812037 | 5.187135e-51 | -8.615850e-47 |
Msa0965490 | Msa1313140 | 0.803045 | 4.204261e-49 | -8.615850e-47 |
Msa0965490 | Msa1327680 | 0.818006 | 2.455395e-52 | -8.615850e-47 |
Msa0965490 | Msa1353470 | 0.803015 | 4.264760e-49 | -8.615850e-47 |
Msa0965490 | Msa1359040 | 0.832036 | 1.188344e-55 | -8.615850e-47 |
Msa0965490 | Msa1370070 | -0.803386 | 3.573922e-49 | -8.615850e-47 |
Msa0965490 | Msa1374470 | 0.803346 | 3.642011e-49 | -8.615850e-47 |
Msa0965490 | Msa1379500 | 0.805685 | 1.184852e-49 | -8.615850e-47 |
Msa0965490 | Msa1386780 | 0.803535 | 3.328084e-49 | -8.615850e-47 |
Msa0965490 | Msa1392780 | 0.810500 | 1.117697e-50 | -8.615850e-47 |
Msa0965490 | Msa1411020 | 0.811749 | 5.990297e-51 | -8.615850e-47 |
Msa0965490 | Msa1416150 | 0.804219 | 2.399478e-49 | -8.615850e-47 |
Msa0965490 | Msa1420490 | 0.810042 | 1.403295e-50 | -8.615850e-47 |
Msa0965490 | Msa1423390 | 0.812556 | 3.994913e-51 | -8.615850e-47 |
Msa0965490 | Msa1423870 | 0.800424 | 1.450556e-48 | -8.615850e-47 |
Msa0965490 | Msa1424290 | 0.808884 | 2.486787e-50 | -8.615850e-47 |
Msa0965490 | Msa1424750 | 0.801478 | 8.837011e-49 | -8.615850e-47 |
Msa0965490 | Msa1427230 | 0.806906 | 6.550315e-50 | -8.615850e-47 |
Msa0965490 | Msa1432420 | 0.812554 | 3.999535e-51 | -8.615850e-47 |
Msa0965490 | Msa1434350 | 0.813557 | 2.410266e-51 | -8.615850e-47 |
Msa0965490 | Msa1439320 | 0.809857 | 1.538115e-50 | -8.615850e-47 |
Msa0965490 | Msa1440370 | 0.810870 | 9.295955e-51 | -8.615850e-47 |
Msa0965490 | Msa1440810 | 0.805881 | 1.077589e-49 | -8.615850e-47 |
Msa0965490 | Msa1457920 | 0.809378 | 1.948892e-50 | -8.615850e-47 |
Msa0965490 | Msa1460830 | 0.808594 | 2.868954e-50 | -8.615850e-47 |
Msa0965490 | Msa1466540 | 0.830757 | 2.453088e-55 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0965490 | MtrunA17_Chr6g0486061 | 88.557 | 201 | 18 | 2 | 1 | 196 | 1 | 201 | 6.01e-127 | 363 |
Msa0965490 | MtrunA17_Chr6g0486061 | 80.645 | 186 | 27 | 2 | 186 | 362 | 2 | 187 | 2.90e-104 | 306 |
Msa0965490 | MtrunA17_Chr6g0486071 | 80.597 | 201 | 34 | 2 | 1 | 196 | 1 | 201 | 1.45e-113 | 329 |
Msa0965490 | MtrunA17_Chr6g0486071 | 85.714 | 182 | 17 | 2 | 190 | 362 | 6 | 187 | 2.01e-107 | 313 |
Msa0965490 | MtrunA17_Chr7g0255501 | 78.495 | 186 | 16 | 4 | 1 | 179 | 1 | 169 | 1.00e-93 | 278 |
Msa0965490 | MtrunA17_Chr7g0255501 | 70.270 | 185 | 27 | 4 | 186 | 359 | 2 | 169 | 3.42e-82 | 248 |
Msa0965490 | MtrunA17_Chr5g0401581 | 40.701 | 371 | 150 | 6 | 1 | 362 | 1 | 310 | 1.08e-86 | 265 |
Msa0965490 | MtrunA17_Chr5g0401581 | 53.535 | 198 | 89 | 2 | 2 | 196 | 127 | 324 | 6.83e-67 | 214 |
Msa0965490 | MtrunA17_Chr5g0393991 | 57.286 | 199 | 82 | 2 | 1 | 196 | 1 | 199 | 1.88e-73 | 227 |
Msa0965490 | MtrunA17_Chr5g0393991 | 55.435 | 184 | 75 | 2 | 186 | 362 | 2 | 185 | 1.64e-62 | 199 |
Msa0965490 | MtrunA17_Chr5g0401571 | 55.556 | 198 | 84 | 2 | 1 | 196 | 1 | 196 | 6.68e-68 | 213 |
Msa0965490 | MtrunA17_Chr5g0401571 | 54.945 | 182 | 66 | 3 | 191 | 362 | 7 | 182 | 2.02e-59 | 191 |
Msa0965490 | MtrunA17_Chr6g0466791 | 53.030 | 198 | 91 | 1 | 1 | 196 | 1 | 198 | 8.15e-65 | 205 |
Msa0965490 | MtrunA17_Chr6g0466791 | 52.514 | 179 | 79 | 1 | 190 | 362 | 6 | 184 | 3.30e-57 | 185 |
Msa0965490 | MtrunA17_Chr7g0256491 | 40.000 | 190 | 110 | 3 | 10 | 196 | 53 | 241 | 2.03e-37 | 135 |
Msa0965490 | MtrunA17_Chr7g0256491 | 39.773 | 176 | 98 | 3 | 194 | 362 | 53 | 227 | 2.74e-33 | 124 |
Msa0965490 | MtrunA17_Chr3g0083801 | 38.462 | 182 | 104 | 4 | 10 | 186 | 29 | 207 | 4.45e-30 | 115 |
Msa0965490 | MtrunA17_Chr3g0083801 | 37.500 | 176 | 102 | 3 | 194 | 362 | 29 | 203 | 3.67e-28 | 110 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0965490 | AT3G22320.1 | 51.010 | 198 | 94 | 2 | 2 | 196 | 1 | 198 | 2.80e-65 | 206 |
Msa0965490 | AT3G22320.1 | 49.444 | 180 | 84 | 2 | 190 | 362 | 5 | 184 | 2.29e-53 | 176 |
Msa0965490 | AT5G57980.1 | 41.414 | 198 | 108 | 4 | 5 | 195 | 5 | 201 | 2.09e-43 | 150 |
Msa0965490 | AT5G57980.1 | 38.798 | 183 | 101 | 3 | 191 | 362 | 7 | 189 | 5.77e-39 | 138 |
Msa0965490 | AT3G57080.1 | 39.037 | 187 | 110 | 4 | 3 | 186 | 20 | 205 | 3.40e-34 | 126 |
Msa0965490 | AT3G57080.1 | 38.636 | 176 | 100 | 4 | 194 | 362 | 27 | 201 | 5.45e-31 | 117 |
Msa0965490 | AT2G41340.1 | 39.444 | 180 | 105 | 3 | 10 | 186 | 23 | 201 | 1.35e-33 | 124 |
Msa0965490 | AT2G41340.1 | 39.773 | 176 | 98 | 3 | 194 | 362 | 23 | 197 | 1.56e-32 | 122 |
Msa0965490 | AT3G54490.1 | 35.135 | 185 | 116 | 3 | 10 | 191 | 38 | 221 | 1.20e-25 | 103 |
Msa0965490 | AT3G54490.1 | 34.659 | 176 | 107 | 3 | 194 | 362 | 38 | 212 | 1.53e-22 | 95.5 |
Msa0965490 | AT2G41340.2 | 34.225 | 187 | 106 | 4 | 194 | 373 | 23 | 199 | 1.81e-23 | 97.1 |
Msa0965490 | AT2G41340.2 | 34.857 | 175 | 95 | 4 | 10 | 178 | 23 | 184 | 3.37e-22 | 93.6 |
Msa0965490 | AT2G41340.3 | 37.821 | 156 | 89 | 3 | 194 | 342 | 23 | 177 | 1.87e-22 | 94.0 |
Msa0965490 | AT2G41340.3 | 37.107 | 159 | 90 | 3 | 10 | 162 | 23 | 177 | 1.13e-21 | 91.7 |
Find 64 sgRNAs with CRISPR-Local
Find 623 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTTCATGTGTTCGCCGTATT+TGG | 0.178722 | 6_3:-92897161 | None:intergenic |
GAATGTTGATAATGGGATTT+TGG | 0.182720 | 6_3:+92889008 | Msa0965490:CDS |
GATCCTGTTGCGAGATATTA+TGG | 0.263062 | 6_3:+92899460 | Msa0965490:CDS |
GAATGTTGATAATGGGATTA+TGG | 0.265855 | 6_3:+92897312 | Msa0965490:CDS |
GATCCTGTTGCGAGATATTA+TGG | 0.267061 | 6_3:+92892519 | Msa0965490:CDS |
CTTGGTGTTAAGATTGTTAG+AGG | 0.323964 | 6_3:+92888961 | Msa0965490:intron |
AGTTTCTGTCGGATAACATT+TGG | 0.355496 | 6_3:-92888786 | None:intergenic |
TTGAACGAGAATGTTGATAA+TGG | 0.358712 | 6_3:+92889000 | Msa0965490:CDS |
TTGAAGGAGAATGTTGATAA+TGG | 0.365536 | 6_3:+92897304 | Msa0965490:CDS |
AGTTTCTGTCGGATAGCATT+TGG | 0.365870 | 6_3:-92897090 | None:intergenic |
GGATCCGACGTCAAAATTCT+AGG | 0.372876 | 6_3:-92892501 | None:intergenic |
TCATGTGTTCGCCGTATTTG+AGG | 0.394018 | 6_3:-92888855 | None:intergenic |
TGGGTTGTTTCTGTGAGTTT+TGG | 0.406142 | 6_3:-92888899 | None:intergenic |
TTGTTAGAGGTATTATTACT+AGG | 0.414736 | 6_3:+92897278 | Msa0965490:intron |
ACACATGAAACGAGAACAAT+TGG | 0.418532 | 6_3:+92888870 | Msa0965490:CDS |
TTCTCGAGACATGGTGAGTT+CGG | 0.435332 | 6_3:-92888824 | None:intergenic |
TCTGCGAGTAAAGCTGTTGC+TGG | 0.436785 | 6_3:+92897358 | Msa0965490:CDS |
AGTCCATAATATCTCGCAAC+AGG | 0.442138 | 6_3:-92892522 | None:intergenic |
AGTCCATAATATCTCGCAAC+AGG | 0.442138 | 6_3:-92899463 | None:intergenic |
TGAACGAGAATGTTGATAAT+GGG | 0.456181 | 6_3:+92889001 | Msa0965490:CDS |
GACAAGTTGTCAGGATTATC+CGG | 0.456842 | 6_3:+92892553 | Msa0965490:CDS |
TGAAGGAGAATGTTGATAAT+GGG | 0.459832 | 6_3:+92897305 | Msa0965490:CDS |
TTCTCGAGACATGGTAAGTT+CGG | 0.464031 | 6_3:-92897128 | None:intergenic |
TTCTCTGATGATGCTAAACT+TGG | 0.475053 | 6_3:+92888943 | Msa0965490:CDS |
CACAGTGTATTTCTTGAGCA+AGG | 0.476320 | 6_3:-92891192 | None:intergenic |
GTTGCTGAAATGAGTTCTGT+TGG | 0.477137 | 6_3:+92889069 | Msa0965490:CDS |
TTCTCTGATAATGCTAAACT+TGG | 0.484073 | 6_3:+92897247 | Msa0965490:CDS |
TAAGGCGTGGACAAGTTGTC+AGG | 0.488439 | 6_3:+92892544 | Msa0965490:CDS |
AACATTCTCGTTCAACATCC+TGG | 0.498165 | 6_3:-92888992 | None:intergenic |
GAAGATTTCATCTCCAAATA+CGG | 0.498349 | 6_3:+92897148 | Msa0965490:CDS |
TATTATTACTAGGATGTTGA+AGG | 0.503440 | 6_3:+92897288 | Msa0965490:CDS |
GAAGATTTCATCCTCAAATA+CGG | 0.509305 | 6_3:+92888844 | Msa0965490:CDS |
TGTCGGATAACATTTGGAGA+AGG | 0.521778 | 6_3:-92888780 | None:intergenic |
AATAGTTAGAGAGCATAAGC+TGG | 0.523167 | 6_3:-92900300 | None:intergenic |
TGCCTGCGGTCTCACTTGGC+CGG | 0.523972 | 6_3:-92892572 | None:intergenic |
GTCGGATAACATTTGGAGAA+GGG | 0.526708 | 6_3:-92888779 | None:intergenic |
TTGCGAGATATTATGGACTA+AGG | 0.534711 | 6_3:+92892526 | Msa0965490:CDS |
TTGCGAGATATTATGGACTA+AGG | 0.534711 | 6_3:+92899467 | Msa0965490:CDS |
GACAGTGTATCTCTTGAGCA+AGG | 0.536488 | 6_3:-92899203 | None:intergenic |
GTTGCTGGAATGAGTTCAGT+TGG | 0.536745 | 6_3:+92897373 | Msa0965490:CDS |
CGAACGTGTACCTCCACATC+AGG | 0.539250 | 6_3:+92891145 | Msa0965490:CDS |
ATAGTTAGAGAGCATAAGCT+GGG | 0.540463 | 6_3:-92900299 | None:intergenic |
ACACATGAAACGAGAACAGT+TGG | 0.541688 | 6_3:+92897174 | Msa0965490:CDS |
CAAGGCTTTCTTCTCAGCGT+CGG | 0.546747 | 6_3:-92891174 | None:intergenic |
CAAGGCTTTCTTCTCAGCGT+CGG | 0.546747 | 6_3:-92899185 | None:intergenic |
TTCGACAAGGTAGTTTCTGT+CGG | 0.552777 | 6_3:-92888797 | None:intergenic |
GATGAAATCTTCTCGAGACA+TGG | 0.592229 | 6_3:-92888833 | None:intergenic |
GGTGCAGGAGGATGAACTGC+TGG | 0.593439 | 6_3:+92899117 | Msa0965490:intron |
TTAGAGAGCATAAGCTGGGG+AGG | 0.598873 | 6_3:-92900295 | None:intergenic |
GTCGACGAGGTAGTTTCTGT+CGG | 0.601745 | 6_3:-92897101 | None:intergenic |
ATACACTGTCAAAGATACTC+AGG | 0.601749 | 6_3:+92899216 | Msa0965490:CDS |
GGTGCAGGAGGATGAACTGC+TGG | 0.602196 | 6_3:+92891106 | Msa0965490:intron |
GATGAAATCTTCTCGAGACA+TGG | 0.607302 | 6_3:-92897137 | None:intergenic |
ATACACTGTGAAAGATACTC+AGG | 0.612579 | 6_3:+92891205 | Msa0965490:CDS |
AGATATTATGGACTAAGGCG+TGG | 0.621762 | 6_3:+92892531 | Msa0965490:CDS |
AGATATTATGGACTAAGGCG+TGG | 0.621762 | 6_3:+92899472 | Msa0965490:CDS |
AACTGCTGGTGAACATAACA+AGG | 0.623262 | 6_3:+92891120 | Msa0965490:CDS |
GCGTCGGTGAGAACCTGATG+TGG | 0.633208 | 6_3:-92891158 | None:intergenic |
GCGTCGGTGAGAACCTGATG+TGG | 0.633208 | 6_3:-92899169 | None:intergenic |
TAAGTTCGGTGTCGTCGACG+AGG | 0.652373 | 6_3:-92897114 | None:intergenic |
TGAGTTCGGTGTCTTCGACA+AGG | 0.665015 | 6_3:-92888810 | None:intergenic |
TCGGTGAGAACCTGATGTGG+AGG | 0.676021 | 6_3:-92891155 | None:intergenic |
TCGGTGAGAACCTGATGTGG+AGG | 0.676021 | 6_3:-92899166 | None:intergenic |
TAGTTAGAGAGCATAAGCTG+GGG | 0.677436 | 6_3:-92900298 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTTAACAAATTATTATCA+GGG | - | chr6_3:92889265-92889284 | None:intergenic | 10.0% |
!!! | TATTTTAACAAATTATTATC+AGG | - | chr6_3:92889266-92889285 | None:intergenic | 10.0% |
!! | AAAAAATTTCAAATTATTAG+CGG | + | chr6_3:92889405-92889424 | Msa0965490:intron | 10.0% |
!!! | AACAATTTTCATATTATTAT+CGG | - | chr6_3:92889962-92889981 | None:intergenic | 10.0% |
!! | AAAATATGTATAATAAATAG+GGG | - | chr6_3:92893389-92893408 | None:intergenic | 10.0% |
!! | GAAAAATATGTATAATAAAT+AGG | - | chr6_3:92893391-92893410 | None:intergenic | 10.0% |
!!! | TAATAACATTTTTTTTTTGA+AGG | + | chr6_3:92893684-92893703 | Msa0965490:intron | 10.0% |
!! | AAAATAAATTGTGAATTTAT+TGG | + | chr6_3:92895431-92895450 | Msa0965490:intron | 10.0% |
!!! | ATTTAGATTTTTTTTTTTGA+AGG | - | chr6_3:92896734-92896753 | None:intergenic | 10.0% |
!!! | ATTTTTTAAAACTAAATGAT+TGG | + | chr6_3:92896773-92896792 | Msa0965490:intron | 10.0% |
!!! | TATTTATTTTTAATTTCTTC+TGG | + | chr6_3:92899261-92899280 | Msa0965490:intron | 10.0% |
!! | ATTACAATAACAAAAATAAA+GGG | - | chr6_3:92899619-92899638 | None:intergenic | 10.0% |
!!! | TTTATTTTTGTTATTGTAAT+GGG | + | chr6_3:92899619-92899638 | Msa0965490:intron | 10.0% |
!! | GTTAATAATTTAATTCAATG+TGG | + | chr6_3:92889517-92889536 | Msa0965490:intron | 15.0% |
!!! | ATTTTCACAAATTATTATCA+AGG | - | chr6_3:92889896-92889915 | None:intergenic | 15.0% |
!!! | TTTATTTTTGTTGTTGTAAT+GGG | + | chr6_3:92892697-92892716 | Msa0965490:intron | 15.0% |
!!! | TTACAAATTTTTTTATGTCA+GGG | + | chr6_3:92893136-92893155 | Msa0965490:intron | 15.0% |
!! | AAAGAAATAATTAATGTAGT+TGG | - | chr6_3:92893357-92893376 | None:intergenic | 15.0% |
!!! | TGTATTAATATTGTTGTTTT+TGG | + | chr6_3:92893873-92893892 | Msa0965490:intron | 15.0% |
!!! | TTCTTTCAATATTTTAATTG+AGG | - | chr6_3:92894298-92894317 | None:intergenic | 15.0% |
!! | TTTCAAATTATTATTTGTGT+CGG | + | chr6_3:92895586-92895605 | Msa0965490:intron | 15.0% |
!!! | TCTTTTTATCTTTCAATAAT+TGG | - | chr6_3:92895893-92895912 | None:intergenic | 15.0% |
!! | AAAATGGAAAAATATCATAT+TGG | + | chr6_3:92896664-92896683 | Msa0965490:intron | 15.0% |
!! | TAGTCAATAATTGTTTATTT+AGG | - | chr6_3:92896862-92896881 | None:intergenic | 15.0% |
!! | TGACAAATTTATTACAAAAA+TGG | + | chr6_3:92898887-92898906 | Msa0965490:intron | 15.0% |
!! | CATTACAATAACAAAAATAA+AGG | - | chr6_3:92899620-92899639 | None:intergenic | 15.0% |
!!! | CTTTATTTTTGTTATTGTAA+TGG | + | chr6_3:92899618-92899637 | Msa0965490:intron | 15.0% |
!!! | TAACTTTTATTTTATCTTCT+TGG | + | chr6_3:92899738-92899757 | Msa0965490:intron | 15.0% |
!! | GAGAATATTAATAAATAAAG+AGG | - | chr6_3:92900245-92900264 | None:intergenic | 15.0% |
!! | TTTAGTGTAATTATAAGTGT+CGG | - | chr6_3:92889377-92889396 | None:intergenic | 20.0% |
!! | AATAATTTAATTCAATGTGG+TGG | + | chr6_3:92889520-92889539 | Msa0965490:intron | 20.0% |
!!! | TTTTGTAATATCTGAATTGT+TGG | + | chr6_3:92889998-92890017 | Msa0965490:intron | 20.0% |
!! | GACAAATTGATATAATTCAA+TGG | + | chr6_3:92890334-92890353 | Msa0965490:intron | 20.0% |
!! | GACTAAAAAAATTCAATTGA+AGG | - | chr6_3:92890510-92890529 | None:intergenic | 20.0% |
!! | TTGCAAATTTGTAAATTTGA+AGG | + | chr6_3:92890690-92890709 | Msa0965490:intron | 20.0% |
!! | ATTCTAACAAAAAAAATTCC+TGG | - | chr6_3:92891004-92891023 | None:intergenic | 20.0% |
!! | AAGGTTATTACTGATAAAAT+AGG | - | chr6_3:92891479-92891498 | None:intergenic | 20.0% |
!!! | TTTTGTCGATTTAAATGATT+TGG | - | chr6_3:92891524-92891543 | None:intergenic | 20.0% |
!! | TACATCATTTAATCTAGAAA+TGG | - | chr6_3:92891925-92891944 | None:intergenic | 20.0% |
!!! | TCTTTATCTAATGGATTTAT+TGG | + | chr6_3:92892376-92892395 | Msa0965490:intron | 20.0% |
!!! | CTTTATTTTTGTTGTTGTAA+TGG | + | chr6_3:92892696-92892715 | Msa0965490:intron | 20.0% |
!! | TGTACATATCTTTATAAGAA+TGG | + | chr6_3:92893025-92893044 | Msa0965490:intron | 20.0% |
!!! | GTTACAAATTTTTTTATGTC+AGG | + | chr6_3:92893135-92893154 | Msa0965490:intron | 20.0% |
!!! | TACAAATTTTTTTATGTCAG+GGG | + | chr6_3:92893137-92893156 | Msa0965490:intron | 20.0% |
!!! | TCAAAAGAGTTTTATAATCA+GGG | - | chr6_3:92893294-92893313 | None:intergenic | 20.0% |
!!! | TTCAAAAGAGTTTTATAATC+AGG | - | chr6_3:92893295-92893314 | None:intergenic | 20.0% |
!! | AATCAGCAATAAAAAACATA+TGG | + | chr6_3:92893414-92893433 | Msa0965490:intron | 20.0% |
!! | TATTTAAGCAATCTTAAAGT+TGG | - | chr6_3:92893613-92893632 | None:intergenic | 20.0% |
!! | AAAAACACAAAAATCAAGAA+AGG | - | chr6_3:92893752-92893771 | None:intergenic | 20.0% |
!! | CAATATTAATACATAAAGAG+AGG | - | chr6_3:92893866-92893885 | None:intergenic | 20.0% |
!! | TAGAATCTCTATATAAATAG+AGG | - | chr6_3:92894644-92894663 | None:intergenic | 20.0% |
!! | TAGATCAAAGTATAATTACT+TGG | + | chr6_3:92895032-92895051 | Msa0965490:intron | 20.0% |
!! | ATACTATTTATCTCTTCAAA+TGG | + | chr6_3:92895183-92895202 | Msa0965490:intron | 20.0% |
!!! | ATTTATTTTCAAGTAAGAAG+TGG | - | chr6_3:92895420-92895439 | None:intergenic | 20.0% |
!! | ATATTATTCCAGTGAATTAT+GGG | + | chr6_3:92895559-92895578 | Msa0965490:intron | 20.0% |
!!! | AAGTCAAACTTTTTTTCTTT+AGG | + | chr6_3:92895830-92895849 | Msa0965490:intron | 20.0% |
!!! | AGTCAAACTTTTTTTCTTTA+GGG | + | chr6_3:92895831-92895850 | Msa0965490:intron | 20.0% |
!! | TTGAATATGAAATGCAAATA+GGG | - | chr6_3:92895942-92895961 | None:intergenic | 20.0% |
!! | ATTGAATATGAAATGCAAAT+AGG | - | chr6_3:92895943-92895962 | None:intergenic | 20.0% |
!! | ATAAAAATAAGTATGAGATG+AGG | - | chr6_3:92896298-92896317 | None:intergenic | 20.0% |
!! | AATTAAATGTTGCATTAGAT+GGG | - | chr6_3:92896377-92896396 | None:intergenic | 20.0% |
!! | AAATTACTGTCAATATTCAA+TGG | - | chr6_3:92896430-92896449 | None:intergenic | 20.0% |
!! | CTTAAATTATATGTTGCATT+TGG | - | chr6_3:92896506-92896525 | None:intergenic | 20.0% |
!! | TAACCAAAAGACTTAAAATT+TGG | + | chr6_3:92896543-92896562 | Msa0965490:intron | 20.0% |
!! | TAAAATCTAGTTAACAAAGA+AGG | - | chr6_3:92896583-92896602 | None:intergenic | 20.0% |
!!! | TTTGTTAACTAGATTTTAGA+AGG | + | chr6_3:92896585-92896604 | Msa0965490:intron | 20.0% |
!!! | GGTTTTATTTAGATGTTAAT+AGG | - | chr6_3:92896708-92896727 | None:intergenic | 20.0% |
!!! | GATTTTTTTTTTTGAAGGAA+GGG | - | chr6_3:92896729-92896748 | None:intergenic | 20.0% |
!!! | AGATTTTTTTTTTTGAAGGA+AGG | - | chr6_3:92896730-92896749 | None:intergenic | 20.0% |
!! | AGAAAATGTCATAATTTAGT+GGG | + | chr6_3:92898214-92898233 | Msa0965490:intron | 20.0% |
!! | TAGTTAAGTTAATGATTACT+AGG | + | chr6_3:92898602-92898621 | Msa0965490:intron | 20.0% |
!!! | TCTTTATCAAATGGATTTAT+TGG | + | chr6_3:92899317-92899336 | Msa0965490:intron | 20.0% |
!!! | ACATAGCAAAAGAATTTTAT+AGG | - | chr6_3:92899715-92899734 | None:intergenic | 20.0% |
!! | ATTAACATCATTAAAAGACA+TGG | - | chr6_3:92900002-92900021 | None:intergenic | 20.0% |
!!! | TGATTTTTATAGAACACAAA+TGG | + | chr6_3:92900115-92900134 | Msa0965490:intron | 20.0% |
!!! | GATTTTTATAGAACACAAAT+GGG | + | chr6_3:92900116-92900135 | Msa0965490:intron | 20.0% |
!! | ATTCTCAATTCTTAAAACAA+TGG | - | chr6_3:92900166-92900185 | None:intergenic | 20.0% |
!!! | TTTTGTCATTTCTGAATTGT+TGG | + | chr6_3:92889136-92889155 | Msa0965490:intron | 25.0% |
! | TTAACAAATTATTATCAGGG+TGG | - | chr6_3:92889262-92889281 | None:intergenic | 25.0% |
!!! | TCTTTTAGAAGGTGTTATTT+TGG | + | chr6_3:92889601-92889620 | Msa0965490:intron | 25.0% |
!!! | CTTTTAGAAGGTGTTATTTT+GGG | + | chr6_3:92889602-92889621 | Msa0965490:intron | 25.0% |
!! | AATGATACTTTTACAACAGA+TGG | - | chr6_3:92890541-92890560 | None:intergenic | 25.0% |
!! | GTGATTCATTCTTTTATATG+AGG | + | chr6_3:92890753-92890772 | Msa0965490:intron | 25.0% |
! | TTACTGATAAAATAGGAACT+AGG | - | chr6_3:92891472-92891491 | None:intergenic | 25.0% |
!!! | TTTTATTACTAGCTTTACAG+AGG | - | chr6_3:92891630-92891649 | None:intergenic | 25.0% |
! | AAATTCTAATACATGCATCT+TGG | + | chr6_3:92891689-92891708 | Msa0965490:intron | 25.0% |
! | GATCTTAATCTTGTTCAATT+GGG | - | chr6_3:92891786-92891805 | None:intergenic | 25.0% |
! | TGATCTTAATCTTGTTCAAT+TGG | - | chr6_3:92891787-92891806 | None:intergenic | 25.0% |
! | TAAGATCACTTCATATTTGA+TGG | + | chr6_3:92891799-92891818 | Msa0965490:intron | 25.0% |
! | TCATTTAATCTAGAAATGGA+AGG | - | chr6_3:92891921-92891940 | None:intergenic | 25.0% |
! | GTATATACTATAACTCTGTT+CGG | + | chr6_3:92891942-92891961 | Msa0965490:intron | 25.0% |
! | GTGATTAAAGTAAAGTTGTT+TGG | + | chr6_3:92892002-92892021 | Msa0965490:intron | 25.0% |
!! | TTAGCAACTTTAATTTCTTC+TGG | + | chr6_3:92892320-92892339 | Msa0965490:intron | 25.0% |
! | ATCCATTAGATAAAGAATGA+AGG | - | chr6_3:92892372-92892391 | None:intergenic | 25.0% |
!!! | GTAGTTTTGATTTTCAGTTA+CGG | + | chr6_3:92892854-92892873 | Msa0965490:intron | 25.0% |
!!! | ACTCTATTTTCTTATTTCTC+AGG | - | chr6_3:92892884-92892903 | None:intergenic | 25.0% |
! | AATAAGAAAATAGAGTGCAA+TGG | + | chr6_3:92892888-92892907 | Msa0965490:intron | 25.0% |
! | CCTAATCACAATTATTATCA+TGG | - | chr6_3:92893116-92893135 | None:intergenic | 25.0% |
! | CCATGATAATAATTGTGATT+AGG | + | chr6_3:92893113-92893132 | Msa0965490:intron | 25.0% |
!! | ACAAATGGGTCTTATAAAAA+GGG | - | chr6_3:92893329-92893348 | None:intergenic | 25.0% |
!! | AACAAATGGGTCTTATAAAA+AGG | - | chr6_3:92893330-92893349 | None:intergenic | 25.0% |
! | TGTAGTTGGAAATAACAAAT+GGG | - | chr6_3:92893343-92893362 | None:intergenic | 25.0% |
! | ATGTAGTTGGAAATAACAAA+TGG | - | chr6_3:92893344-92893363 | None:intergenic | 25.0% |
!!! | ATTCTCGTAATTTTAGCAAA+AGG | + | chr6_3:92893526-92893545 | Msa0965490:intron | 25.0% |
!!! | TTCTCGTAATTTTAGCAAAA+GGG | + | chr6_3:92893527-92893546 | Msa0965490:intron | 25.0% |
!! | ATTTTACATGTTTACCCTTT+AGG | - | chr6_3:92893665-92893684 | None:intergenic | 25.0% |
! | AAAATCCAAATACAACAGTT+TGG | - | chr6_3:92893903-92893922 | None:intergenic | 25.0% |
! | TATCTATCGAAGTTGTTAAT+AGG | + | chr6_3:92893933-92893952 | Msa0965490:intron | 25.0% |
! | ATACTGAAACCACTTTAATA+TGG | + | chr6_3:92894130-92894149 | Msa0965490:intron | 25.0% |
! | GTAACAATACCATATTAAAG+TGG | - | chr6_3:92894142-92894161 | None:intergenic | 25.0% |
! | AAATTAAAAAGTGGAAATGG+TGG | - | chr6_3:92894273-92894292 | None:intergenic | 25.0% |
! | GAGAAATTAAAAAGTGGAAA+TGG | - | chr6_3:92894276-92894295 | None:intergenic | 25.0% |
! | ATTGAGGAGAAATTAAAAAG+TGG | - | chr6_3:92894282-92894301 | None:intergenic | 25.0% |
! | CGACATTATTATTCCAAAAA+GGG | + | chr6_3:92894355-92894374 | Msa0965490:intron | 25.0% |
! | AATAATACTCTTTATTCCGA+AGG | + | chr6_3:92894389-92894408 | Msa0965490:intron | 25.0% |
! | ATAATACTCTTTATTCCGAA+GGG | + | chr6_3:92894390-92894409 | Msa0965490:intron | 25.0% |
! | AAACAATTGGATTTGAATGA+AGG | + | chr6_3:92894796-92894815 | Msa0965490:intron | 25.0% |
! | ACCAACATAAGCTAAATTTA+TGG | + | chr6_3:92894858-92894877 | Msa0965490:intron | 25.0% |
! | CCAACATAAGCTAAATTTAT+GGG | + | chr6_3:92894859-92894878 | Msa0965490:intron | 25.0% |
!!! | TGTGTGTGTTTTATTTTATG+TGG | + | chr6_3:92894973-92894992 | Msa0965490:intron | 25.0% |
!!! | GTGTGTGTTTTATTTTATGT+GGG | + | chr6_3:92894974-92894993 | Msa0965490:intron | 25.0% |
! | AATTGAAAAAATAGAGTGTG+GGG | - | chr6_3:92895002-92895021 | None:intergenic | 25.0% |
! | GAATTGAAAAAATAGAGTGT+GGG | - | chr6_3:92895003-92895022 | None:intergenic | 25.0% |
! | TGAATTGAAAAAATAGAGTG+TGG | - | chr6_3:92895004-92895023 | None:intergenic | 25.0% |
! | TGTGATGTTGGAAAATAAAT+TGG | - | chr6_3:92895069-92895088 | None:intergenic | 25.0% |
! | CATATTATTCCAGTGAATTA+TGG | + | chr6_3:92895558-92895577 | Msa0965490:intron | 25.0% |
! | GGATGTAACTATAAAAGTAA+AGG | - | chr6_3:92895695-92895714 | None:intergenic | 25.0% |
!! | TGATTTTCATGTAGTCTATT+TGG | - | chr6_3:92895716-92895735 | None:intergenic | 25.0% |
!! | AACTTGTTTGAAAACTTTAC+CGG | + | chr6_3:92895787-92895806 | Msa0965490:intron | 25.0% |
! | AGAAGTCAAACATTTCTTTA+GGG | + | chr6_3:92895854-92895873 | Msa0965490:intron | 25.0% |
! | AGATTATGATGAAATAGTTG+AGG | + | chr6_3:92895910-92895929 | Msa0965490:intron | 25.0% |
! | GCATACTAAATTGTACTTAT+AGG | - | chr6_3:92896014-92896033 | None:intergenic | 25.0% |
!!! | TTTTAATTGCAGAGAATCAT+TGG | - | chr6_3:92896069-92896088 | None:intergenic | 25.0% |
! | TAGATTTAGAAAGAAAGAGT+AGG | + | chr6_3:92896237-92896256 | Msa0965490:intron | 25.0% |
! | CAATTAAATGTTGCATTAGA+TGG | - | chr6_3:92896378-92896397 | None:intergenic | 25.0% |
!!! | AAGCCAAATTTTAAGTCTTT+TGG | - | chr6_3:92896549-92896568 | None:intergenic | 25.0% |
!! | ACTTAAAATTTGGCTTATGA+GGG | + | chr6_3:92896553-92896572 | Msa0965490:intron | 25.0% |
!! | ATCCTTTGTTAACTAGATTT+TGG | + | chr6_3:92896623-92896642 | Msa0965490:intron | 25.0% |
! | TTCCAAAATCTAGTTAACAA+AGG | - | chr6_3:92896628-92896647 | None:intergenic | 25.0% |
!! | TTTGTTAACTAGATTTTGGA+AGG | + | chr6_3:92896627-92896646 | Msa0965490:intron | 25.0% |
!! | ATAATCTGAAATTCGATCAT+AGG | - | chr6_3:92896895-92896914 | None:intergenic | 25.0% |
! | TTTCTATATTGTTAGGGTTA+GGG | - | chr6_3:92896938-92896957 | None:intergenic | 25.0% |
!!! | TAGTTTTGTTATGTCTTCTT+CGG | - | chr6_3:92897047-92897066 | None:intergenic | 25.0% |
!!! | TTGTTAGAGGTATTATTACT+AGG | + | chr6_3:92897278-92897297 | Msa0965490:intron | 25.0% |
! | TATTATTACTAGGATGTTGA+AGG | + | chr6_3:92897288-92897307 | Msa0965490:CDS | 25.0% |
! | TAATTGATTAAGTGTGTGTT+TGG | + | chr6_3:92897861-92897880 | Msa0965490:intron | 25.0% |
! | TAATTGATTAAGTGTGTGTT+TGG | + | chr6_3:92897861-92897880 | Msa0965490:intron | 25.0% |
! | GAGAAAATGTCATAATTTAG+TGG | + | chr6_3:92898213-92898232 | Msa0965490:intron | 25.0% |
!! | TCTTCTAGTTAGAATAATTC+TGG | + | chr6_3:92898393-92898412 | Msa0965490:intron | 25.0% |
!!! | AGAATTGATTTTGACATGTT+TGG | - | chr6_3:92898447-92898466 | None:intergenic | 25.0% |
! | CAATTAGGAGATAAGATAAT+CGG | + | chr6_3:92898534-92898553 | Msa0965490:intron | 25.0% |
!! | ATTTTGCAATCTCGTAAATT+TGG | + | chr6_3:92898733-92898752 | Msa0965490:intron | 25.0% |
! | TAAATTTGTCAATTTCGCAA+TGG | - | chr6_3:92898878-92898897 | None:intergenic | 25.0% |
!!! | CTTTTATTTTATCTTCTTGG+AGG | + | chr6_3:92899741-92899760 | Msa0965490:intron | 25.0% |
! | TCAATTCTTAAAACAATGGA+CGG | - | chr6_3:92900162-92900181 | None:intergenic | 25.0% |
!!! | GAGTTTTGTTATGTCTTCTT+CGG | - | chr6_3:92888743-92888762 | None:intergenic | 30.0% |
GAAGATTTCATCCTCAAATA+CGG | + | chr6_3:92888844-92888863 | Msa0965490:CDS | 30.0% | |
!!! | TTGTTAGAGGTTTTATTACC+AGG | + | chr6_3:92888974-92888993 | Msa0965490:CDS | 30.0% |
! | TTGAACGAGAATGTTGATAA+TGG | + | chr6_3:92889000-92889019 | Msa0965490:CDS | 30.0% |
!! | TGAACGAGAATGTTGATAAT+GGG | + | chr6_3:92889001-92889020 | Msa0965490:CDS | 30.0% |
!!! | GAATGTTGATAATGGGATTT+TGG | + | chr6_3:92889008-92889027 | Msa0965490:CDS | 30.0% |
AATTTAATTCAATGTGGTGG+TGG | + | chr6_3:92889523-92889542 | Msa0965490:intron | 30.0% | |
! | TTTCAGTAGTTGTTTCGTAA+AGG | + | chr6_3:92889658-92889677 | Msa0965490:intron | 30.0% |
GAAAATAATTCACATGTGTC+TGG | + | chr6_3:92889910-92889929 | Msa0965490:intron | 30.0% | |
! | TGTTTGATAGCTATGAAACA+CGG | + | chr6_3:92890281-92890300 | Msa0965490:intron | 30.0% |
!!! | ATGGCTTGATGTTTTGAAAA+AGG | + | chr6_3:92890431-92890450 | Msa0965490:intron | 30.0% |
!!! | TGGCTTGATGTTTTGAAAAA+GGG | + | chr6_3:92890432-92890451 | Msa0965490:intron | 30.0% |
!! | TTTTGATTGTCAATACTGCA+AGG | - | chr6_3:92890731-92890750 | None:intergenic | 30.0% |
!! | TGCAGTATTGACAATCAAAA+TGG | + | chr6_3:92890731-92890750 | Msa0965490:intron | 30.0% |
TTGACGAATGTGTAGAAAAA+TGG | + | chr6_3:92890835-92890854 | Msa0965490:intron | 30.0% | |
AGATGATAACTTCTAACATG+TGG | + | chr6_3:92891361-92891380 | Msa0965490:intron | 30.0% | |
TCACAGAAAAACATCAGAAA+CGG | - | chr6_3:92891426-92891445 | None:intergenic | 30.0% | |
AACTAGGAACAGATCAAATT+CGG | - | chr6_3:92891456-92891475 | None:intergenic | 30.0% | |
GTATATTAACTAACAAGCCT+AGG | - | chr6_3:92891564-92891583 | None:intergenic | 30.0% | |
ATATAATTGCATCACAATGC+AGG | - | chr6_3:92891591-92891610 | None:intergenic | 30.0% | |
TGATGCAATTATATCCGAAT+TGG | + | chr6_3:92891597-92891616 | Msa0965490:intron | 30.0% | |
!! | ACAGAGGTTATTTTCCAATT+CGG | - | chr6_3:92891614-92891633 | None:intergenic | 30.0% |
! | GAAGTGTTTGGTAAAATTAG+CGG | - | chr6_3:92892184-92892203 | None:intergenic | 30.0% |
! | CAGATTGAATTTGAAGTGTT+TGG | - | chr6_3:92892196-92892215 | None:intergenic | 30.0% |
CAAACACTTCAAATTCAATC+TGG | + | chr6_3:92892194-92892213 | Msa0965490:intron | 30.0% | |
ACAAATATCGTGCAAACTTA+GGG | - | chr6_3:92892255-92892274 | None:intergenic | 30.0% | |
AACAAATATCGTGCAAACTT+AGG | - | chr6_3:92892256-92892275 | None:intergenic | 30.0% | |
CTCCTTCATTCTTTATCTAA+TGG | + | chr6_3:92892367-92892386 | Msa0965490:intron | 30.0% | |
CAACATGACATATGTTGTAA+TGG | + | chr6_3:92892734-92892753 | Msa0965490:intron | 30.0% | |
ATTCCAACTTAGTAAGATTG+TGG | + | chr6_3:92892923-92892942 | Msa0965490:intron | 30.0% | |
TTCCAACTTAGTAAGATTGT+GGG | + | chr6_3:92892924-92892943 | Msa0965490:intron | 30.0% | |
! | CTTTCTTCACATATTTGTTG+AGG | - | chr6_3:92893195-92893214 | None:intergenic | 30.0% |
TAAACTAACTCTCTCTCTTA+AGG | + | chr6_3:92893443-92893462 | Msa0965490:intron | 30.0% | |
AATTACGAGAATCAAGAAAG+TGG | - | chr6_3:92893518-92893537 | None:intergenic | 30.0% | |
TAACTAATTCTGTCTCCTAA+AGG | + | chr6_3:92893647-92893666 | Msa0965490:intron | 30.0% | |
AACTAATTCTGTCTCCTAAA+GGG | + | chr6_3:92893648-92893667 | Msa0965490:intron | 30.0% | |
ATAAAGAGAGGATGAACAAT+TGG | - | chr6_3:92893854-92893873 | None:intergenic | 30.0% | |
GATTTCCAAACTGTTGTATT+TGG | + | chr6_3:92893895-92893914 | Msa0965490:intron | 30.0% | |
TGATAGTTTGGAGAACTTAA+AGG | - | chr6_3:92894217-92894236 | None:intergenic | 30.0% | |
AGTTCTCCAAACTATCAATA+TGG | + | chr6_3:92894220-92894239 | Msa0965490:intron | 30.0% | |
! | GTAGTACCATATTGATAGTT+TGG | - | chr6_3:92894229-92894248 | None:intergenic | 30.0% |
GCGACATTATTATTCCAAAA+AGG | + | chr6_3:92894354-92894373 | Msa0965490:intron | 30.0% | |
! | TTAAGATCATAGTCCCTTTT+TGG | - | chr6_3:92894371-92894390 | None:intergenic | 30.0% |
TTCGATAATATAAGTCCCTT+CGG | - | chr6_3:92894408-92894427 | None:intergenic | 30.0% | |
AAGGGACTTATATTATCGAA+GGG | + | chr6_3:92894408-92894427 | Msa0965490:intron | 30.0% | |
AAGATCATTCTTAATTCCGA+AGG | + | chr6_3:92894333-92894352 | Msa0965490:intron | 30.0% | |
AGATCATTCTTAATTCCGAA+GGG | + | chr6_3:92894443-92894462 | Msa0965490:intron | 30.0% | |
AAGAACACTCTTAATTCTGA+AGG | + | chr6_3:92894495-92894514 | Msa0965490:intron | 30.0% | |
AGAACACTCTTAATTCTGAA+GGG | + | chr6_3:92894496-92894515 | Msa0965490:intron | 30.0% | |
! | AAAGAGTTTCATTGAGTTGT+CGG | - | chr6_3:92894595-92894614 | None:intergenic | 30.0% |
AGTATCGTTGAACTGATTAA+TGG | - | chr6_3:92894731-92894750 | None:intergenic | 30.0% | |
ATTAATCAGTTCAACGATAC+TGG | + | chr6_3:92894730-92894749 | Msa0965490:intron | 30.0% | |
AAGAAACAAATCCACAAAAG+TGG | + | chr6_3:92894766-92894785 | Msa0965490:intron | 30.0% | |
! | CCCATAAATTTAGCTTATGT+TGG | - | chr6_3:92894862-92894881 | None:intergenic | 30.0% |
ATTGAAAAAATAGAGTGTGG+GGG | - | chr6_3:92895001-92895020 | None:intergenic | 30.0% | |
GTAGAAGAGTTTAAATTGAG+AGG | + | chr6_3:92895213-92895232 | Msa0965490:intron | 30.0% | |
GAATACATGAAACACCATAT+AGG | - | chr6_3:92895260-92895279 | None:intergenic | 30.0% | |
! | TTTAAGAAGAGCATGAGAAA+TGG | - | chr6_3:92895287-92895306 | None:intergenic | 30.0% |
ATGCATTAGTAAGAGAATGA+AGG | - | chr6_3:92895336-92895355 | None:intergenic | 30.0% | |
GAATGTACCAAGAAAAAAGA+GGG | - | chr6_3:92895386-92895405 | None:intergenic | 30.0% | |
AGAATGTACCAAGAAAAAAG+AGG | - | chr6_3:92895387-92895406 | None:intergenic | 30.0% | |
!!! | TATTTTCAAGTAAGAAGTGG+AGG | - | chr6_3:92895417-92895436 | None:intergenic | 30.0% |
TTCACTGGAATAATATGTGT+TGG | - | chr6_3:92895555-92895574 | None:intergenic | 30.0% | |
GAAAAAATCCCATAATTCAC+TGG | - | chr6_3:92895570-92895589 | None:intergenic | 30.0% | |
ACTTGTTTGAAAACTTTACC+GGG | + | chr6_3:92895788-92895807 | Msa0965490:intron | 30.0% | |
AAAGACAGAATATTTAGTCC+CGG | - | chr6_3:92895809-92895828 | None:intergenic | 30.0% | |
GAGAAGTCAAACATTTCTTT+AGG | + | chr6_3:92895853-92895872 | Msa0965490:intron | 30.0% | |
TACAATGACATTGAAATGCA+AGG | + | chr6_3:92896037-92896056 | Msa0965490:intron | 30.0% | |
ACAATGACATTGAAATGCAA+GGG | + | chr6_3:92896038-92896057 | Msa0965490:intron | 30.0% | |
CTATTTATCGAGCAATCTAA+TGG | - | chr6_3:92896106-92896125 | None:intergenic | 30.0% | |
! | GACTTAAAATTTGGCTTATG+AGG | + | chr6_3:92896552-92896571 | Msa0965490:intron | 30.0% |
!! | ACTAAATGATTGGTTTCAAG+TGG | + | chr6_3:92896783-92896802 | Msa0965490:intron | 30.0% |
! | CCATTTTAAATAACCGAGTT+CGG | + | chr6_3:92896834-92896853 | Msa0965490:intron | 30.0% |
TGATCGAATTTCAGATTATC+TGG | + | chr6_3:92896896-92896915 | Msa0965490:intron | 30.0% | |
GTTTCTATATTGTTAGGGTT+AGG | - | chr6_3:92896939-92896958 | None:intergenic | 30.0% | |
!! | CTGCTGTTTCTATATTGTTA+GGG | - | chr6_3:92896944-92896963 | None:intergenic | 30.0% |
GAAGATTTCATCTCCAAATA+CGG | + | chr6_3:92897148-92897167 | Msa0965490:CDS | 30.0% | |
!!! | ACACACAGATTTTTTCAGAT+GGG | - | chr6_3:92897225-92897244 | None:intergenic | 30.0% |
!!! | AACACACAGATTTTTTCAGA+TGG | - | chr6_3:92897226-92897245 | None:intergenic | 30.0% |
! | TTCTCTGATAATGCTAAACT+TGG | + | chr6_3:92897247-92897266 | Msa0965490:CDS | 30.0% |
!! | CTTGGTGTTAATATTGTTAG+AGG | + | chr6_3:92897265-92897284 | Msa0965490:intron | 30.0% |
! | TTGAAGGAGAATGTTGATAA+TGG | + | chr6_3:92897304-92897323 | Msa0965490:CDS | 30.0% |
!! | TGAAGGAGAATGTTGATAAT+GGG | + | chr6_3:92897305-92897324 | Msa0965490:CDS | 30.0% |
!! | GAATGTTGATAATGGGATTA+TGG | + | chr6_3:92897312-92897331 | Msa0965490:CDS | 30.0% |
CAATTACCATAAAGACTTCA+AGG | - | chr6_3:92897408-92897427 | None:intergenic | 30.0% | |
AATTAGATAGCTTCATGTGT+AGG | + | chr6_3:92897787-92897806 | Msa0965490:intron | 30.0% | |
TCTAGTTAGAATAATTCTGG+AGG | + | chr6_3:92898396-92898415 | Msa0965490:intron | 30.0% | |
!!! | TACACCTCTAGAATCAATTT+TGG | + | chr6_3:92898466-92898485 | Msa0965490:intron | 30.0% |
GGTTAATCAGGTAATCAATT+AGG | + | chr6_3:92898519-92898538 | Msa0965490:intron | 30.0% | |
TTTGATTGTCAATACTGCAA+AGG | - | chr6_3:92890730-92890749 | None:intergenic | 30.0% | |
!! | TGCAGTATTGACAATCAAAA+TGG | + | chr6_3:92890731-92890750 | Msa0965490:intron | 30.0% |
!! | AGTATTGACAATCAAAATGG+TGG | + | chr6_3:92890734-92890753 | Msa0965490:intron | 30.0% |
! | GTGGTTCATTCTTTTATAAG+AGG | + | chr6_3:92898800-92898819 | Msa0965490:intron | 30.0% |
! | AATTTCTGACATGTGTCATT+AGG | + | chr6_3:92898997-92899016 | Msa0965490:intron | 30.0% |
ATATAGTTCTTCATGTGTGT+TGG | + | chr6_3:92899060-92899079 | Msa0965490:intron | 30.0% | |
CTCTGTCATTCTTTATCAAA+TGG | + | chr6_3:92899308-92899327 | Msa0965490:intron | 30.0% | |
! | GGATCATTCGTCAAAATTTT+AGG | - | chr6_3:92899445-92899464 | None:intergenic | 30.0% |
CAACATGATATATGTTGCAA+TGG | + | chr6_3:92899656-92899675 | Msa0965490:intron | 30.0% | |
! | GTAGTTTCAATTTTCGGTTA+TGG | + | chr6_3:92899841-92899860 | Msa0965490:intron | 30.0% |
TGAGAAATATATACATGCAC+GGG | - | chr6_3:92899964-92899983 | None:intergenic | 30.0% | |
GTGAGAAATATATACATGCA+CGG | - | chr6_3:92899965-92899984 | None:intergenic | 30.0% | |
GTGAAACATGTAAGTTGTAT+TGG | - | chr6_3:92900067-92900086 | None:intergenic | 30.0% | |
GTATTCATGCATTAGAACAA+TGG | - | chr6_3:92900094-92900113 | None:intergenic | 30.0% | |
!!! | TCTCTTTAGTTTTCACTCAA+GGG | + | chr6_3:92900267-92900286 | Msa0965490:intron | 30.0% |
!!! | ACATTTGGAGAAGGGTTTTT+TGG | - | chr6_3:92888774-92888793 | None:intergenic | 35.0% |
AGTTTCTGTCGGATAACATT+TGG | - | chr6_3:92888789-92888808 | None:intergenic | 35.0% | |
ACACATGAAACGAGAACAAT+TGG | + | chr6_3:92888870-92888889 | Msa0965490:CDS | 35.0% | |
!!! | ACACGCAGATTTTTTCAGAT+GGG | - | chr6_3:92888921-92888940 | None:intergenic | 35.0% |
!!! | AACACGCAGATTTTTTCAGA+TGG | - | chr6_3:92888922-92888941 | None:intergenic | 35.0% |
! | TTCTCTGATGATGCTAAACT+TGG | + | chr6_3:92888943-92888962 | Msa0965490:CDS | 35.0% |
!! | CTTGGTGTTAAGATTGTTAG+AGG | + | chr6_3:92888961-92888980 | Msa0965490:intron | 35.0% |
CAATTACCAGAAAGACTTCA+AGG | - | chr6_3:92889104-92889123 | None:intergenic | 35.0% | |
ATTGATATGCAACACTGACA+CGG | + | chr6_3:92889159-92889178 | Msa0965490:intron | 35.0% | |
TTGTTTGATCTTGAGAGTAG+TGG | + | chr6_3:92889549-92889568 | Msa0965490:intron | 35.0% | |
TCAGCTTAATTGATGTCGTA+GGG | + | chr6_3:92889573-92889592 | Msa0965490:intron | 35.0% | |
!!! | TGTTATTTTGGGATGTGTAG+TGG | + | chr6_3:92889613-92889632 | Msa0965490:intron | 35.0% |
! | TTCGTAAAGGAGTCTGTTTT+AGG | + | chr6_3:92889671-92889690 | Msa0965490:intron | 35.0% |
!! | TTTTAGGTGGTGATGTGTTT+TGG | + | chr6_3:92889687-92889706 | Msa0965490:intron | 35.0% |
!!! | TTTTGGTGGGTTAATCTTCA+GGG | + | chr6_3:92889704-92889723 | Msa0965490:intron | 35.0% |
!!! | TAATCTTCAGGGGTGTTTTT+AGG | + | chr6_3:92889715-92889734 | Msa0965490:intron | 35.0% |
TGGACGAAAGAAGATACAAA+TGG | - | chr6_3:92889770-92889789 | None:intergenic | 35.0% | |
TCAAGCTCTATCTAACTTTG+TGG | - | chr6_3:92890165-92890184 | None:intergenic | 35.0% | |
TTAGATAGAGCTTGATGTGT+AGG | + | chr6_3:92890170-92890189 | Msa0965490:intron | 35.0% | |
!! | TGTTGGAAGGTGTTTGAAAA+AGG | + | chr6_3:92890193-92890212 | Msa0965490:intron | 35.0% |
ATCACATATCGTGTCAAACA+TGG | - | chr6_3:92890224-92890243 | None:intergenic | 35.0% | |
!! | TTTTGAAAAAGGGTGATGAC+TGG | + | chr6_3:92890442-92890461 | Msa0965490:intron | 35.0% |
ATCATTCTTTGAACCATCAC+AGG | + | chr6_3:92890555-92890574 | Msa0965490:intron | 35.0% | |
TGCAAACAAGAACTAAGAAC+AGG | - | chr6_3:92890609-92890628 | None:intergenic | 35.0% | |
TAAGTCTACCACTAATCCTA+CGG | + | chr6_3:92890632-92890651 | Msa0965490:intron | 35.0% | |
ATACACTGTGAAAGATACTC+AGG | + | chr6_3:92891205-92891224 | Msa0965490:CDS | 35.0% | |
CTAATACATGCATCTTGGTT+TGG | + | chr6_3:92891694-92891713 | Msa0965490:intron | 35.0% | |
! | TGGTTTGGACAATGCATATA+AGG | + | chr6_3:92891709-92891728 | Msa0965490:intron | 35.0% |
GGTTTGGACAATGCATATAA+GGG | + | chr6_3:92891710-92891729 | Msa0965490:intron | 35.0% | |
! | GCGGAATTTAGCATTTCTTT+TGG | - | chr6_3:92891761-92891780 | None:intergenic | 35.0% |
! | AATCTTGTTCAATTGGGTTG+CGG | - | chr6_3:92891780-92891799 | None:intergenic | 35.0% |
AAGTTGCTAAGACAAGTGAA+AGG | - | chr6_3:92892310-92892329 | None:intergenic | 35.0% | |
! | TTGCGAGATATTATGGACTA+AGG | + | chr6_3:92892526-92892545 | Msa0965490:CDS | 35.0% |
GTATGTAATATATGTGCCTG+CGG | - | chr6_3:92892589-92892608 | None:intergenic | 35.0% | |
GATAAGCTCAAGAAGCAATT+CGG | - | chr6_3:92892611-92892630 | None:intergenic | 35.0% | |
GAATTGCTTCTTGAGCTTAT+CGG | + | chr6_3:92892610-92892629 | Msa0965490:intron | 35.0% | |
! | GCATGCTTGGCATAAATTTT+AGG | - | chr6_3:92892660-92892679 | None:intergenic | 35.0% |
ATATAATCACGATGCATGCT+TGG | - | chr6_3:92892673-92892692 | None:intergenic | 35.0% | |
ATACATCCAAGACACAAACA+GGG | - | chr6_3:92892799-92892818 | None:intergenic | 35.0% | |
AATACATCCAAGACACAAAC+AGG | - | chr6_3:92892800-92892819 | None:intergenic | 35.0% | |
AACCTATATCAAATCAGCAC+AGG | + | chr6_3:92893216-92893235 | Msa0965490:intron | 35.0% | |
!! | TACCTGTGCTGATTTGATAT+AGG | - | chr6_3:92893221-92893240 | None:intergenic | 35.0% |
!! | AGTTTTATAATCAGGGACAG+AGG | - | chr6_3:92893287-92893306 | None:intergenic | 35.0% |
!!! | TAGCTAAGCTTGTTTTATCC+TGG | - | chr6_3:92894030-92894049 | None:intergenic | 35.0% |
GAGATTTACACCTTCGAATA+TGG | + | chr6_3:92894089-92894108 | Msa0965490:intron | 35.0% | |
GTGGTTTCAGTATTAAAGAG+TGG | - | chr6_3:92894123-92894142 | None:intergenic | 35.0% | |
GTATTGTTACCACTCTGTTA+TGG | + | chr6_3:92894152-92894171 | Msa0965490:intron | 35.0% | |
GAACTTAAAGGTTAGAATGG+TGG | - | chr6_3:92894205-92894224 | None:intergenic | 35.0% | |
GGAGAACTTAAAGGTTAGAA+TGG | - | chr6_3:92894208-92894227 | None:intergenic | 35.0% | |
TTGGAATAATAATGTCGCGT+CGG | - | chr6_3:92894352-92894371 | None:intergenic | 35.0% | |
GAAGGGACTTATATTATCGA+AGG | + | chr6_3:92894407-92894426 | Msa0965490:intron | 35.0% | |
! | TTTTCGGTTTAATGTCCCTT+CGG | - | chr6_3:92894461-92894480 | None:intergenic | 35.0% |
AAGGGACATTAAACCGAAAA+GGG | + | chr6_3:92894461-92894480 | Msa0965490:intron | 35.0% | |
ATTAAACCGAAAAGGGACTA+TGG | + | chr6_3:92894468-92894487 | Msa0965490:intron | 35.0% | |
! | TTAAGACCATAGTCCCTTTT+CGG | - | chr6_3:92894477-92894496 | None:intergenic | 35.0% |
! | ATTCTGAAGGGACAGAAAAA+AGG | + | chr6_3:92894508-92894527 | Msa0965490:intron | 35.0% |
! | AAGAGTTTCATTGAGTTGTC+GGG | - | chr6_3:92894594-92894613 | None:intergenic | 35.0% |
GACAACTCAATGAAACTCTT+TGG | + | chr6_3:92894594-92894613 | Msa0965490:intron | 35.0% | |
TGCGACAACAATTACTCTAA+TGG | + | chr6_3:92894683-92894702 | Msa0965490:intron | 35.0% | |
AAACAAATCCACAAAAGTGG+AGG | + | chr6_3:92894769-92894788 | Msa0965490:intron | 35.0% | |
AAGTGGAGGAAACAAACAAT+TGG | + | chr6_3:92894783-92894802 | Msa0965490:intron | 35.0% | |
TTGGAACATTAGTGTGATGT+TGG | - | chr6_3:92895081-92895100 | None:intergenic | 35.0% | |
TTAGGGAGGAGAATATTTGT+TGG | - | chr6_3:92895100-92895119 | None:intergenic | 35.0% | |
! | AGAGAGCATAAGCTAGATTA+GGG | - | chr6_3:92895117-92895136 | None:intergenic | 35.0% |
! | AAGAGAGCATAAGCTAGATT+AGG | - | chr6_3:92895118-92895137 | None:intergenic | 35.0% |
TCACTATTCCACATCCTATA+TGG | + | chr6_3:92895243-92895262 | Msa0965490:intron | 35.0% | |
ATGAAACACCATATAGGATG+TGG | - | chr6_3:92895254-92895273 | None:intergenic | 35.0% | |
ATTAGTAAGAGAATGAAGGC+TGG | - | chr6_3:92895332-92895351 | None:intergenic | 35.0% | |
TCCATGAAAGAAATTCGAGT+AGG | + | chr6_3:92895355-92895374 | Msa0965490:intron | 35.0% | |
TCCTACTCGAATTTCTTTCA+TGG | - | chr6_3:92895359-92895378 | None:intergenic | 35.0% | |
CTATAAAAGTAAAGGACTCG+AGG | - | chr6_3:92895687-92895706 | None:intergenic | 35.0% | |
AAACATATGGTCCTGATCTA+AGG | - | chr6_3:92895760-92895779 | None:intergenic | 35.0% | |
CAAGTTAACCACGAAACATA+TGG | - | chr6_3:92895773-92895792 | None:intergenic | 35.0% | |
! | ATTGCAGAGAATCATTGGTT+TGG | - | chr6_3:92896064-92896083 | None:intergenic | 35.0% |
ATGAGATGAGGAAACTTCTA+TGG | - | chr6_3:92896286-92896305 | None:intergenic | 35.0% | |
GGAGACTTCATAGTCAAAAA+TGG | + | chr6_3:92896648-92896667 | Msa0965490:intron | 35.0% | |
CCGAACTCGGTTATTTAAAA+TGG | - | chr6_3:92896837-92896856 | None:intergenic | 35.0% | |
GTTTATTTAGGAACCGAACT+CGG | - | chr6_3:92896850-92896869 | None:intergenic | 35.0% | |
! | TTAGGGTTAGGGATTTTTGT+GGG | - | chr6_3:92896927-92896946 | None:intergenic | 35.0% |
!! | GCTGCTGTTTCTATATTGTT+AGG | - | chr6_3:92896945-92896964 | None:intergenic | 35.0% |
ATAGCTTCATGTGTAGGTTT+AGG | + | chr6_3:92897793-92897812 | Msa0965490:intron | 35.0% | |
!! | AGGAAGAAGGTGTTTGAAAA+AGG | + | chr6_3:92897813-92897832 | Msa0965490:intron | 35.0% |
!! | GGAAGAAGGTGTTTGAAAAA+GGG | + | chr6_3:92897814-92897833 | Msa0965490:intron | 35.0% |
AGTTAGATAGCTTGATGTGT+AGG | + | chr6_3:92898063-92898082 | Msa0965490:intron | 35.0% | |
!! | TTGGAAGAAGGTGTTTGAAA+AGG | + | chr6_3:92898088-92898107 | Msa0965490:intron | 35.0% |
!! | TGGAAGAAGGTGTTTGAAAA+GGG | + | chr6_3:92898089-92898108 | Msa0965490:intron | 35.0% |
! | ACAGCCAAAATTGATTCTAG+AGG | - | chr6_3:92898473-92898492 | None:intergenic | 35.0% |
! | TGTATGCTTGGTTTCACTTT+TGG | - | chr6_3:92898496-92898515 | None:intergenic | 35.0% |
TGATTAACCTAGTGTATGCT+TGG | - | chr6_3:92898508-92898527 | None:intergenic | 35.0% | |
AAGCATACACTAGGTTAATC+AGG | + | chr6_3:92898507-92898526 | Msa0965490:intron | 35.0% | |
GATAAGATAATCGGTTAGAG+AGG | + | chr6_3:92898543-92898562 | Msa0965490:intron | 35.0% | |
! | TAGGATTAGTGGTAGACTAA+TGG | - | chr6_3:92898680-92898699 | None:intergenic | 35.0% |
TTAGTCTACCACTAATCCTA+TGG | + | chr6_3:92898680-92898699 | Msa0965490:intron | 35.0% | |
TTGCAATCTCGTAAATTTGG+AGG | + | chr6_3:92898736-92898755 | Msa0965490:intron | 35.0% | |
! | TTTAAGGTTGAGGTAATCGT+CGG | + | chr6_3:92899093-92899112 | Msa0965490:intron | 35.0% |
ATACACTGTCAAAGATACTC+AGG | + | chr6_3:92899216-92899235 | Msa0965490:CDS | 35.0% | |
! | TTGCGAGATATTATGGACTA+AGG | + | chr6_3:92892526-92892545 | Msa0965490:CDS | 35.0% |
GATAAGCTCAAGAAGCAATT+CGG | - | chr6_3:92892611-92892630 | None:intergenic | 35.0% | |
GAATTGCTTCTTGAGCTTAT+CGG | + | chr6_3:92892610-92892629 | Msa0965490:intron | 35.0% | |
! | GCATGCTTGGCATAAATTTT+AGG | - | chr6_3:92892660-92892679 | None:intergenic | 35.0% |
ATATAACCACTATGCATGCT+TGG | - | chr6_3:92899595-92899614 | None:intergenic | 35.0% | |
! | TATCTTCTTGGAGGTTCTTT+TGG | + | chr6_3:92899750-92899769 | Msa0965490:intron | 35.0% |
! | GCAGCAGTAGTTTCAATTTT+CGG | + | chr6_3:92899835-92899854 | Msa0965490:intron | 35.0% |
AATATATACATGCACGGGTA+AGG | - | chr6_3:92899959-92899978 | None:intergenic | 35.0% | |
AATGCACACATGGAATAATG+AGG | - | chr6_3:92900210-92900229 | None:intergenic | 35.0% | |
!!! | GTCTCTTTAGTTTTCACTCA+AGG | + | chr6_3:92900266-92900285 | Msa0965490:intron | 35.0% |
GTCGGATAACATTTGGAGAA+GGG | - | chr6_3:92888782-92888801 | None:intergenic | 40.0% | |
TGTCGGATAACATTTGGAGA+AGG | - | chr6_3:92888783-92888802 | None:intergenic | 40.0% | |
TTCGACAAGGTAGTTTCTGT+CGG | - | chr6_3:92888800-92888819 | None:intergenic | 40.0% | |
GATGAAATCTTCTCGAGACA+TGG | - | chr6_3:92888836-92888855 | None:intergenic | 40.0% | |
!!! | TGGGTTGTTTCTGTGAGTTT+TGG | - | chr6_3:92888902-92888921 | None:intergenic | 40.0% |
AACATTCTCGTTCAACATCC+TGG | - | chr6_3:92888995-92889014 | None:intergenic | 40.0% | |
GTTGCTGAAATGAGTTCTGT+TGG | + | chr6_3:92889069-92889088 | Msa0965490:CDS | 40.0% | |
!! | TATAAGTGTCGGTGTCTTGT+CGG | - | chr6_3:92889366-92889385 | None:intergenic | 40.0% |
CTAACACATGCTATGAAGCA+CGG | - | chr6_3:92889455-92889474 | None:intergenic | 40.0% | |
CTCAGCTTAATTGATGTCGT+AGG | + | chr6_3:92889572-92889591 | Msa0965490:intron | 40.0% | |
CAGCTTAATTGATGTCGTAG+GGG | + | chr6_3:92889574-92889593 | Msa0965490:intron | 40.0% | |
GTGTAGTGGCAATGAGTTTA+TGG | + | chr6_3:92889627-92889646 | Msa0965490:intron | 40.0% | |
!! | GTAAAGGAGTCTGTTTTAGG+TGG | + | chr6_3:92889674-92889693 | Msa0965490:intron | 40.0% |
!!! | GTTTTGGTGGGTTAATCTTC+AGG | + | chr6_3:92889703-92889722 | Msa0965490:intron | 40.0% |
!! | TTTGGTGGGTTAATCTTCAG+GGG | + | chr6_3:92889705-92889724 | Msa0965490:intron | 40.0% |
TATGGTGTACCGTCTATATG+CGG | + | chr6_3:92889742-92889761 | Msa0965490:intron | 40.0% | |
ATAGCTATGAAACACGGACA+TGG | + | chr6_3:92890287-92890306 | Msa0965490:intron | 40.0% | |
TTCAATGGAATTGCGTGTGT+CGG | + | chr6_3:92890349-92890368 | Msa0965490:intron | 40.0% | |
ATTCTTTGAACCATCACAGG+TGG | + | chr6_3:92890558-92890577 | Msa0965490:intron | 40.0% | |
CACATTCGTCAAATTCGCAA+TGG | - | chr6_3:92890827-92890846 | None:intergenic | 40.0% | |
TGCAAAGTTGCACAGTATAG+AGG | + | chr6_3:92890936-92890955 | Msa0965490:intron | 40.0% | |
GCAAAGTTGCACAGTATAGA+GGG | + | chr6_3:92890937-92890956 | Msa0965490:intron | 40.0% | |
AAAAAATTCCTGGTGACACG+TGG | - | chr6_3:92890994-92891013 | None:intergenic | 40.0% | |
GAGTCCTTCTTCATATGTGT+TGG | + | chr6_3:92891049-92891068 | Msa0965490:intron | 40.0% | |
TCCTTCTTCATATGTGTTGG+TGG | + | chr6_3:92891052-92891071 | Msa0965490:intron | 40.0% | |
! | CCTTCTTCATATGTGTTGGT+GGG | + | chr6_3:92891053-92891072 | Msa0965490:intron | 40.0% |
AAGGTTGAGGTAATCATCGA+TGG | + | chr6_3:92891085-92891104 | Msa0965490:intron | 40.0% | |
AACTGCTGGTGAACATAACA+AGG | + | chr6_3:92891120-92891139 | Msa0965490:CDS | 40.0% | |
CACAGTGTATTTCTTGAGCA+AGG | - | chr6_3:92891195-92891214 | None:intergenic | 40.0% | |
! | CTGTTTTCTGCACAAATCCT+AGG | + | chr6_3:92891544-92891563 | Msa0965490:intron | 40.0% |
TACTATAACTCTGTTCGGCA+AGG | + | chr6_3:92891947-92891966 | Msa0965490:intron | 40.0% | |
GTGTTTGGTAAAATTAGCGG+TGG | - | chr6_3:92892181-92892200 | None:intergenic | 40.0% | |
!! | GCTACCTAGAATTTTGACGT+CGG | + | chr6_3:92892497-92892516 | Msa0965490:intron | 40.0% |
GATCCTGTTGCGAGATATTA+TGG | + | chr6_3:92892519-92892538 | Msa0965490:CDS | 40.0% | |
AGTCCATAATATCTCGCAAC+AGG | - | chr6_3:92892525-92892544 | None:intergenic | 40.0% | |
! | AGATATTATGGACTAAGGCG+TGG | + | chr6_3:92892531-92892550 | Msa0965490:CDS | 40.0% |
GACAAGTTGTCAGGATTATC+CGG | + | chr6_3:92892553-92892572 | Msa0965490:CDS | 40.0% | |
AGAAAATAGAGTGCAATGGC+TGG | + | chr6_3:92892892-92892911 | Msa0965490:intron | 40.0% | |
GTCCCACAATCTTACTAAGT+TGG | - | chr6_3:92892929-92892948 | None:intergenic | 40.0% | |
CACAGGTAGCTGAATCATTA+GGG | + | chr6_3:92893233-92893252 | Msa0965490:intron | 40.0% | |
AGCAAAAGGGTCCTATAAGT+AGG | + | chr6_3:92893540-92893559 | Msa0965490:intron | 40.0% | |
GCAAAAGGGTCCTATAAGTA+GGG | + | chr6_3:92893541-92893560 | Msa0965490:intron | 40.0% | |
! | AGTCTGCCTTGCACAATTTT+GGG | - | chr6_3:92894005-92894024 | None:intergenic | 40.0% |
! | TAGTCTGCCTTGCACAATTT+TGG | - | chr6_3:92894006-92894025 | None:intergenic | 40.0% |
CAAGCTTAGCTACAACTGTA+CGG | + | chr6_3:92894038-92894057 | Msa0965490:intron | 40.0% | |
! | TCGAAGGTGTAAATCTCGAA+CGG | - | chr6_3:92894086-92894105 | None:intergenic | 40.0% |
GGTCTTAGTACCATATTCGA+AGG | - | chr6_3:92894102-92894121 | None:intergenic | 40.0% | |
ACACCATATTTGAGTGGTCT+CGG | - | chr6_3:92894180-92894199 | None:intergenic | 40.0% | |
GTGGTAACACCATATTTGAG+TGG | - | chr6_3:92894186-92894205 | None:intergenic | 40.0% | |
GTACTACGACCACTCAAATA+TGG | + | chr6_3:92894242-92894261 | Msa0965490:intron | 40.0% | |
GTGGTATCACCATATTTGAG+TGG | - | chr6_3:92894254-92894273 | None:intergenic | 40.0% | |
GAAGGGACATTAAACCGAAA+AGG | + | chr6_3:92894460-92894479 | Msa0965490:intron | 40.0% | |
TCGTCAACACAAGTCAAGAA+AGG | + | chr6_3:92894550-92894569 | Msa0965490:intron | 40.0% | |
CGTCAACACAAGTCAAGAAA+GGG | + | chr6_3:92894551-92894570 | Msa0965490:intron | 40.0% | |
AATCAGTTCAACGATACTGG+TGG | + | chr6_3:92894733-92894752 | Msa0965490:intron | 40.0% | |
!! | GTTTGTTTCCTCCACTTTTG+TGG | - | chr6_3:92894780-92894799 | None:intergenic | 40.0% |
TTATGCTCTCTTCTTAGCCT+AGG | + | chr6_3:92895126-92895145 | Msa0965490:intron | 40.0% | |
! | AATAGAAGAGTAGAGTGCCT+AGG | - | chr6_3:92895146-92895165 | None:intergenic | 40.0% |
!!! | GGAATCTCCCTCTTTTTTCT+TGG | + | chr6_3:92895376-92895395 | Msa0965490:intron | 40.0% |
! | TATTATTTGTGTCGGCGTGT+CGG | + | chr6_3:92895594-92895613 | Msa0965490:intron | 40.0% |
! | TGGATTAGGGAAAAGTCCTT+AGG | - | chr6_3:92895658-92895677 | None:intergenic | 40.0% |
ATGCTACACAACCTTAGATC+AGG | + | chr6_3:92895746-92895765 | Msa0965490:intron | 40.0% | |
! | GTTAGGGTTAGGGATTTTTG+TGG | - | chr6_3:92896928-92896947 | None:intergenic | 40.0% |
! | CCATTGTTGTACTTTTGCGT+CGG | - | chr6_3:92897018-92897037 | None:intergenic | 40.0% |
AGTTTCTGTCGGATAGCATT+TGG | - | chr6_3:92897093-92897112 | None:intergenic | 40.0% | |
TTCTCGAGACATGGTAAGTT+CGG | - | chr6_3:92897131-92897150 | None:intergenic | 40.0% | |
GATGAAATCTTCTCGAGACA+TGG | - | chr6_3:92888836-92888855 | None:intergenic | 40.0% | |
TTTCATGTGTTCGCCGTATT+TGG | - | chr6_3:92888860-92888879 | None:intergenic | 40.0% | |
ACACATGAAACGAGAACAGT+TGG | + | chr6_3:92897174-92897193 | Msa0965490:CDS | 40.0% | |
TAAGCGCCTTGAAGTCTTTA+TGG | + | chr6_3:92897399-92897418 | Msa0965490:intron | 40.0% | |
!! | ATTATGAGTGTCGACGTATG+TGG | - | chr6_3:92897657-92897676 | None:intergenic | 40.0% |
CTTCTGATTGAAGGTCAAAC+TGG | - | chr6_3:92897753-92897772 | None:intergenic | 40.0% | |
! | TGACCTTCAATCAGAAGTGT+TGG | + | chr6_3:92897756-92897775 | Msa0965490:intron | 40.0% |
CATGTGTAGGTTTAGGAAGA+AGG | + | chr6_3:92897800-92897819 | Msa0965490:intron | 40.0% | |
GTTTGAAAAAGGGCGATGAT+TGG | + | chr6_3:92897824-92897843 | Msa0965490:intron | 40.0% | |
! | AAAAAGGGCGATGATTGGTT+AGG | + | chr6_3:92897829-92897848 | Msa0965490:intron | 40.0% |
CAACACTTCTTATCGAAGGT+CGG | - | chr6_3:92898028-92898047 | None:intergenic | 40.0% | |
ACACCAACACTTCTTATCGA+AGG | - | chr6_3:92898032-92898051 | None:intergenic | 40.0% | |
ATAGCTTGATGTGTAGGTGT+TGG | + | chr6_3:92898069-92898088 | Msa0965490:intron | 40.0% | |
!! | AAGAAGGTGTTTGAAAAGGG+TGG | + | chr6_3:92898092-92898111 | Msa0965490:intron | 40.0% |
TGTTTGAAAAGGGTGGTGAT+TGG | + | chr6_3:92898099-92898118 | Msa0965490:intron | 40.0% | |
ATTAGGACACTGACACACAT+AGG | + | chr6_3:92898250-92898269 | Msa0965490:intron | 40.0% | |
! | AAGCCTTCCATCAAAAGTGT+CGG | + | chr6_3:92898282-92898301 | Msa0965490:intron | 40.0% |
!!! | TATAGCACCGACACTTTTGA+TGG | - | chr6_3:92898292-92898311 | None:intergenic | 40.0% |
GTAGCTTGATGTCTATGTGT+TGG | + | chr6_3:92898319-92898338 | Msa0965490:intron | 40.0% | |
GATGTCTATGTGTTGGAAGA+AGG | + | chr6_3:92898326-92898345 | Msa0965490:intron | 40.0% | |
GGTTCGAAAAGGATGATGAT+TGG | + | chr6_3:92898350-92898369 | Msa0965490:intron | 40.0% | |
AGTGAAACCAAGCATACACT+AGG | + | chr6_3:92898498-92898517 | Msa0965490:intron | 40.0% | |
AGATAATCGGTTAGAGAGGT+AGG | + | chr6_3:92898547-92898566 | Msa0965490:intron | 40.0% | |
ACCACTAATCCTATGGACAT+TGG | + | chr6_3:92898687-92898706 | Msa0965490:intron | 40.0% | |
ACCAATGTCCATAGGATTAG+TGG | - | chr6_3:92898691-92898710 | None:intergenic | 40.0% | |
TCTCATTCACCAATGTCCAT+AGG | - | chr6_3:92898699-92898718 | None:intergenic | 40.0% | |
GCTTTGTAGAAATCTGTGCA+AGG | + | chr6_3:92898934-92898953 | Msa0965490:intron | 40.0% | |
GCAAGGTTGCACATTATAGA+AGG | + | chr6_3:92898951-92898970 | Msa0965490:intron | 40.0% | |
TAGTTCTTCATGTGTGTTGG+TGG | + | chr6_3:92899063-92899082 | Msa0965490:intron | 40.0% | |
! | AGTTCTTCATGTGTGTTGGT+GGG | + | chr6_3:92899064-92899083 | Msa0965490:intron | 40.0% |
GATCCTGTTGCGAGATATTA+TGG | + | chr6_3:92892519-92892538 | Msa0965490:CDS | 40.0% | |
AGTCCATAATATCTCGCAAC+AGG | - | chr6_3:92892525-92892544 | None:intergenic | 40.0% | |
! | AGATATTATGGACTAAGGCG+TGG | + | chr6_3:92892531-92892550 | Msa0965490:CDS | 40.0% |
GACAAGTTGTCAGGATTATC+CGG | + | chr6_3:92892553-92892572 | Msa0965490:CDS | 40.0% | |
TTTATGCCAAGCATGCATAG+TGG | + | chr6_3:92899586-92899605 | Msa0965490:intron | 40.0% | |
ACTATTCCCTGTTTGTGTCT+TGG | + | chr6_3:92899774-92899793 | Msa0965490:intron | 40.0% | |
CATCATCCAAGACACAAACA+GGG | - | chr6_3:92899783-92899802 | None:intergenic | 40.0% | |
ACATCATCCAAGACACAAAC+AGG | - | chr6_3:92899784-92899803 | None:intergenic | 40.0% | |
! | TCATCTTCTGAGAGCAATTG+AGG | + | chr6_3:92899921-92899940 | Msa0965490:intron | 40.0% |
GAACGATTGAAATGCACACA+TGG | - | chr6_3:92900220-92900239 | None:intergenic | 40.0% | |
TTCTCGAGACATGGTGAGTT+CGG | - | chr6_3:92888827-92888846 | None:intergenic | 45.0% | |
TCATGTGTTCGCCGTATTTG+AGG | - | chr6_3:92888858-92888877 | None:intergenic | 45.0% | |
TAAGCGCCTTGAAGTCTTTC+TGG | + | chr6_3:92889095-92889114 | Msa0965490:intron | 45.0% | |
!! | AAGGAGTGTCAGTGCTTCAT+AGG | - | chr6_3:92889315-92889334 | None:intergenic | 45.0% |
CATGCTATGAAGCACGGATA+CGG | - | chr6_3:92889449-92889468 | None:intergenic | 45.0% | |
CTTAATTGATGTCGTAGGGG+TGG | + | chr6_3:92889577-92889596 | Msa0965490:intron | 45.0% | |
! | GTAGGGGTGGTTCTTTTAGA+AGG | + | chr6_3:92889590-92889609 | Msa0965490:intron | 45.0% |
!! | TAGGTGGTGATGTGTTTTGG+TGG | + | chr6_3:92889690-92889709 | Msa0965490:intron | 45.0% |
!!! | AGGTGGTGATGTGTTTTGGT+GGG | + | chr6_3:92889691-92889710 | Msa0965490:intron | 45.0% |
!!! | TCTTCAGGGGTGTTTTTAGG+TGG | + | chr6_3:92889718-92889737 | Msa0965490:intron | 45.0% |
!!! | GGGGTGTTTTTAGGTGGTTA+TGG | + | chr6_3:92889724-92889743 | Msa0965490:intron | 45.0% |
!! | CAAATGGTGCCGCATATAGA+CGG | - | chr6_3:92889754-92889773 | None:intergenic | 45.0% |
GCACTTACACTTCTGATGGA+AGG | - | chr6_3:92890143-92890162 | None:intergenic | 45.0% | |
TGTGGCACTTACACTTCTGA+TGG | - | chr6_3:92890147-92890166 | None:intergenic | 45.0% | |
AGAGCTTGATGTGTAGGTGT+TGG | + | chr6_3:92890176-92890195 | Msa0965490:intron | 45.0% | |
!! | CTTGATGTGTAGGTGTTGGA+AGG | + | chr6_3:92890180-92890199 | Msa0965490:intron | 45.0% |
TGTTGGACAGTGTCAGACAA+TGG | + | chr6_3:92890372-92890391 | Msa0965490:intron | 45.0% | |
GACACACTGTCCATAAGTGT+CGG | + | chr6_3:92890394-92890413 | Msa0965490:intron | 45.0% | |
!! | TCCATAAGTGTCGGTGCTAT+AGG | + | chr6_3:92890403-92890422 | Msa0965490:intron | 45.0% |
!! | CCATAAGTGTCGGTGCTATA+GGG | + | chr6_3:92890404-92890423 | Msa0965490:intron | 45.0% |
CAGTATTCATCCACCTGTGA+TGG | - | chr6_3:92890571-92890590 | None:intergenic | 45.0% | |
ACCACTAATCCTACGGACAA+TGG | + | chr6_3:92890639-92890658 | Msa0965490:intron | 45.0% | |
ACCATTGTCCGTAGGATTAG+TGG | - | chr6_3:92890643-92890662 | None:intergenic | 45.0% | |
ACTAATCCTACGGACAATGG+TGG | + | chr6_3:92890642-92890661 | Msa0965490:intron | 45.0% | |
TCTTATCCACCATTGTCCGT+AGG | - | chr6_3:92890651-92890670 | None:intergenic | 45.0% | |
CCCACCAACACATATGAAGA+AGG | - | chr6_3:92891056-92891075 | None:intergenic | 45.0% | |
! | TCTTCATATGTGTTGGTGGG+TGG | + | chr6_3:92891056-92891075 | Msa0965490:intron | 45.0% |
! | TGTTGGTGGGTGGTTCTTTA+AGG | + | chr6_3:92891066-92891085 | Msa0965490:intron | 45.0% |
!! | TGGGTGGTTCTTTAAGGTTG+AGG | + | chr6_3:92891072-92891091 | Msa0965490:intron | 45.0% |
AACACTGCACTCTGCACATA+AGG | - | chr6_3:92891498-92891517 | None:intergenic | 45.0% | |
TACGCTAAAAGCTAGCGGTT+TGG | - | chr6_3:92891973-92891992 | None:intergenic | 45.0% | |
CCTGATACGCTAAAAGCTAG+CGG | - | chr6_3:92891978-92891997 | None:intergenic | 45.0% | |
TTTGGTATAGTGTGGGATGG+TGG | - | chr6_3:92892228-92892247 | None:intergenic | 45.0% | |
CTGTTTGGTATAGTGTGGGA+TGG | - | chr6_3:92892231-92892250 | None:intergenic | 45.0% | |
GGGTCTGTTTGGTATAGTGT+GGG | - | chr6_3:92892235-92892254 | None:intergenic | 45.0% | |
AGGGTCTGTTTGGTATAGTG+TGG | - | chr6_3:92892236-92892255 | None:intergenic | 45.0% | |
GTGCAAACTTAGGGTCTGTT+TGG | - | chr6_3:92892246-92892265 | None:intergenic | 45.0% | |
GCTAAGACAAGTGAAAGGCA+AGG | - | chr6_3:92892305-92892324 | None:intergenic | 45.0% | |
GGATCCGACGTCAAAATTCT+AGG | - | chr6_3:92892504-92892523 | None:intergenic | 45.0% | |
CCAAGACACAAACAGGGAAT+AGG | - | chr6_3:92892793-92892812 | None:intergenic | 45.0% | |
CCTATTCCCTGTTTGTGTCT+TGG | + | chr6_3:92892790-92892809 | Msa0965490:intron | 45.0% | |
!!! | TAGAGTGCAATGGCTGGTTT+TGG | + | chr6_3:92892898-92892917 | Msa0965490:intron | 45.0% |
GCACAGGTAGCTGAATCATT+AGG | + | chr6_3:92893232-92893251 | Msa0965490:intron | 45.0% | |
AAGGGTCCTATAAGTAGGGA+CGG | + | chr6_3:92893545-92893564 | Msa0965490:intron | 45.0% | |
! | TAATAGGTTGAGTCACGACC+AGG | + | chr6_3:92893949-92893968 | Msa0965490:intron | 45.0% |
!! | GCTCTCTTTAAGACGTTTCG+TGG | + | chr6_3:92893974-92893993 | Msa0965490:intron | 45.0% |
GCACTACCCAAAATTGTGCA+AGG | + | chr6_3:92893996-92894015 | Msa0965490:intron | 45.0% | |
! | GGTGTGTCTTTTGAACTGAG+TGG | + | chr6_3:92894615-92894634 | Msa0965490:intron | 45.0% |
! | GTTCAACGATACTGGTGGAT+AGG | + | chr6_3:92894738-92894757 | Msa0965490:intron | 45.0% |
GAGCATAAGCTAGATTAGGG+AGG | - | chr6_3:92895114-92895133 | None:intergenic | 45.0% | |
AGCTATGAAGCACGAACACT+CGG | + | chr6_3:92895477-92895496 | Msa0965490:intron | 45.0% | |
ATGCAACACGTATCTGACAC+CGG | - | chr6_3:92895515-92895534 | None:intergenic | 45.0% | |
!! | TGTTGGTGTCGTGTTCGTAT+TGG | - | chr6_3:92895538-92895557 | None:intergenic | 45.0% |
TCTATGAAGCACGGATACGA+CGG | - | chr6_3:92895635-92895654 | None:intergenic | 45.0% | |
ATCCGTGCTTCATAGACCTA+AGG | + | chr6_3:92895639-92895658 | Msa0965490:intron | 45.0% | |
GTCCTTAGGTCTATGAAGCA+CGG | - | chr6_3:92895644-92895663 | None:intergenic | 45.0% | |
CTCGAGGATAAGCTGGATTA+GGG | - | chr6_3:92895671-92895690 | None:intergenic | 45.0% | |
ACTCGAGGATAAGCTGGATT+AGG | - | chr6_3:92895672-92895691 | None:intergenic | 45.0% | |
TAAAGGACTCGAGGATAAGC+TGG | - | chr6_3:92895678-92895697 | None:intergenic | 45.0% | |
GATCAGGACCATATGTTTCG+TGG | + | chr6_3:92895762-92895781 | Msa0965490:intron | 45.0% | |
! | GTTAGGGATTTTTGTGGGTC+GGG | - | chr6_3:92896922-92896941 | None:intergenic | 45.0% |
! | GGTTAGGGATTTTTGTGGGT+CGG | - | chr6_3:92896923-92896942 | None:intergenic | 45.0% |
! | CCGACGCAAAAGTACAACAA+TGG | + | chr6_3:92897015-92897034 | Msa0965490:intron | 45.0% |
GTTGCTGGAATGAGTTCAGT+TGG | + | chr6_3:92897373-92897392 | Msa0965490:CDS | 45.0% | |
!! | ATAGCTACGAAGCACTGACA+CGG | + | chr6_3:92897463-92897482 | Msa0965490:intron | 45.0% |
TCACATGTGTCATGCTGTGT+TGG | + | chr6_3:92897620-92897639 | Msa0965490:intron | 45.0% | |
GCACCAACACTTCTGATTGA+AGG | - | chr6_3:92897762-92897781 | None:intergenic | 45.0% | |
TCACATGTGTCATGCTGTGT+CGG | + | chr6_3:92897620-92897639 | Msa0965490:intron | 45.0% | |
! | CGACCTTCGATAAGAAGTGT+TGG | + | chr6_3:92898026-92898045 | Msa0965490:intron | 45.0% |
!! | GATGTGTAGGTGTTGGAAGA+AGG | + | chr6_3:92898076-92898095 | Msa0965490:intron | 45.0% |
TGGGATTGCACGTGTCTATT+AGG | + | chr6_3:92898233-92898252 | Msa0965490:intron | 45.0% | |
CACTGACACACATAGGACAA+CGG | + | chr6_3:92898257-92898276 | Msa0965490:intron | 45.0% | |
ACTGACACACATAGGACAAC+GGG | + | chr6_3:92898258-92898277 | Msa0965490:intron | 45.0% | |
!! | AGTGTCGGTGCTATAGTGTT+AGG | + | chr6_3:92898297-92898316 | Msa0965490:intron | 45.0% |
GTCTATGTGTTGGAAGAAGG+TGG | + | chr6_3:92898329-92898348 | Msa0965490:intron | 45.0% | |
TGGAAGAAGGTGGTTCGAAA+AGG | + | chr6_3:92898339-92898358 | Msa0965490:intron | 45.0% | |
!!! | TGTTGGTGGGCGGTTTTTTA+AGG | + | chr6_3:92899077-92899096 | Msa0965490:intron | 45.0% |
!!! | TGGGCGGTTTTTTAAGGTTG+AGG | + | chr6_3:92899083-92899102 | Msa0965490:intron | 45.0% |
GACAGTGTATCTCTTGAGCA+AGG | - | chr6_3:92899206-92899225 | None:intergenic | 45.0% | |
TTAGGTAGCTGAGAAGCAGA+CGG | - | chr6_3:92899427-92899446 | None:intergenic | 45.0% | |
GAGAGCAATTGAGGTTGAAC+CGG | + | chr6_3:92899930-92899949 | Msa0965490:intron | 45.0% | |
!!! | AAATTTTTTTTTTTTTGAAT+CGG | - | chr6_3:92889832-92889851 | None:intergenic | 5.0% |
!! | ATTAAAAATAAATATAAAGA+AGG | - | chr6_3:92891244-92891263 | None:intergenic | 5.0% |
!! | AAAAATATGTATAATAAATA+GGG | - | chr6_3:92893390-92893409 | None:intergenic | 5.0% |
!!! | ATAAATAGTATATTTAAAAT+TGG | - | chr6_3:92895174-92895193 | None:intergenic | 5.0% |
!! | TAAAAAATAAATATAAATCA+GGG | - | chr6_3:92896761-92896780 | None:intergenic | 5.0% |
!! | TTAAAAAATAAATATAAATC+AGG | - | chr6_3:92896762-92896781 | None:intergenic | 5.0% |
!!! | GTTTTTATTTTATTTTTTTA+AGG | - | chr6_3:92896815-92896834 | None:intergenic | 5.0% |
!! | ATTAAAAATAAATATAAAGA+AGG | - | chr6_3:92891244-92891263 | None:intergenic | 5.0% |
!! | TGAGTTCGGTGTCTTCGACA+AGG | - | chr6_3:92888813-92888832 | None:intergenic | 50.0% |
! | GCACTGACACTCCTTCGATT+AGG | + | chr6_3:92889320-92889339 | Msa0965490:intron | 50.0% |
TCCTTCGATTAGGTGTGTCC+CGG | + | chr6_3:92889330-92889349 | Msa0965490:intron | 50.0% | |
! | ATTAGCGGTGTCAGAGTGTC+CGG | + | chr6_3:92889420-92889439 | Msa0965490:intron | 50.0% |
!! | CCCTATAGCACCGACACTTA+TGG | - | chr6_3:92890407-92890426 | None:intergenic | 50.0% |
!! | GTCGGTGCTATAGGGTTAGA+TGG | + | chr6_3:92890412-92890431 | Msa0965490:intron | 50.0% |
AATTTCTGCCACGTGTCACC+AGG | + | chr6_3:92890983-92891002 | Msa0965490:intron | 50.0% | |
GAGGTAATCATCGATGGTGC+AGG | + | chr6_3:92891091-92891110 | Msa0965490:intron | 50.0% | |
GTAATCATCGATGGTGCAGG+AGG | + | chr6_3:92891094-92891113 | Msa0965490:intron | 50.0% | |
CAAGGCTTTCTTCTCAGCGT+CGG | - | chr6_3:92891177-92891196 | None:intergenic | 50.0% | |
!!! | CCGCTAGCTTTTAGCGTATC+AGG | + | chr6_3:92891975-92891994 | Msa0965490:intron | 50.0% |
CTAGGTAGCTGAGAAGCAGA+CGG | - | chr6_3:92892486-92892505 | None:intergenic | 50.0% | |
TAAGGCGTGGACAAGTTGTC+AGG | + | chr6_3:92892544-92892563 | Msa0965490:CDS | 50.0% | |
CTACCTCCGTCCCTACTTAT+AGG | - | chr6_3:92893554-92893573 | None:intergenic | 50.0% | |
ACGTCTTAAAGAGAGCGACC+TGG | - | chr6_3:92893970-92893989 | None:intergenic | 50.0% | |
TTGTGCAAGGCAGACTATCC+AGG | + | chr6_3:92894009-92894028 | Msa0965490:intron | 50.0% | |
GTGCCGAGACCACTCAAATA+TGG | + | chr6_3:92894174-92894193 | Msa0965490:intron | 50.0% | |
! | CACTCGGATTAGACGTATCC+CGG | + | chr6_3:92895493-92895512 | Msa0965490:intron | 50.0% |
TGCAACACGTATCTGACACC+GGG | - | chr6_3:92895514-92895533 | None:intergenic | 50.0% | |
CTATGAAGCACGGATACGAC+GGG | - | chr6_3:92895634-92895653 | None:intergenic | 50.0% | |
GTCGACGAGGTAGTTTCTGT+CGG | - | chr6_3:92897104-92897123 | None:intergenic | 50.0% | |
TCTGCGAGTAAAGCTGTTGC+TGG | + | chr6_3:92897358-92897377 | Msa0965490:CDS | 50.0% | |
CTTCTTATCGAAGGTCGGAC+TGG | - | chr6_3:92898023-92898042 | None:intergenic | 50.0% | |
!! | GCACCGACACTTTTGATGGA+AGG | - | chr6_3:92898288-92898307 | None:intergenic | 50.0% |
! | TCTTCATGTGTGTTGGTGGG+CGG | + | chr6_3:92899067-92899086 | Msa0965490:intron | 50.0% |
AAGGTTGAGGTAATCGTCGG+TGG | + | chr6_3:92899096-92899115 | Msa0965490:intron | 50.0% | |
CAAGGCTTTCTTCTCAGCGT+CGG | - | chr6_3:92891177-92891196 | None:intergenic | 50.0% | |
TAAGGCGTGGACAAGTTGTC+AGG | + | chr6_3:92892544-92892563 | Msa0965490:CDS | 50.0% | |
TATGTGCCTGCAGTCTCACT+TGG | - | chr6_3:92899520-92899539 | None:intergenic | 50.0% | |
! | TTAGAGAGCATAAGCTGGGG+AGG | - | chr6_3:92900298-92900317 | None:intergenic | 50.0% |
CCTTCGATTAGGTGTGTCCC+GGG | + | chr6_3:92889331-92889350 | Msa0965490:intron | 55.0% | |
! | TCTTGTCGGTGTCTGACACC+CGG | - | chr6_3:92889352-92889371 | None:intergenic | 55.0% |
TGAAGCACGGATACGGACAC+CGG | - | chr6_3:92889442-92889461 | None:intergenic | 55.0% | |
CGTCCATACCTTGCGTCTTG+CGG | + | chr6_3:92889784-92889803 | Msa0965490:intron | 55.0% | |
GTCCATACCTTGCGTCTTGC+GGG | + | chr6_3:92889785-92889804 | Msa0965490:intron | 55.0% | |
TCCATACCTTGCGTCTTGCG+GGG | + | chr6_3:92889786-92889805 | Msa0965490:intron | 55.0% | |
! | GGAATTGCGTGTGTCGGTGT+TGG | + | chr6_3:92890355-92890374 | Msa0965490:intron | 55.0% |
CGAACGTGTACCTCCACATC+AGG | + | chr6_3:92891145-92891164 | Msa0965490:CDS | 55.0% | |
TCGGTGAGAACCTGATGTGG+AGG | - | chr6_3:92891158-92891177 | None:intergenic | 55.0% | |
TATGTGCCTGCGGTCTCACT+TGG | - | chr6_3:92892579-92892598 | None:intergenic | 55.0% | |
GGTCCTATAAGTAGGGACGG+AGG | + | chr6_3:92893548-92893567 | Msa0965490:intron | 55.0% | |
GTCTCGGCACCATAACAGAG+TGG | - | chr6_3:92894164-92894183 | None:intergenic | 55.0% | |
!! | TAAGTTCGGTGTCGTCGACG+AGG | - | chr6_3:92897117-92897136 | None:intergenic | 55.0% |
!! | TGAGTGTCGACGTATGTGGC+TGG | - | chr6_3:92897653-92897672 | None:intergenic | 55.0% |
! | GTGTCATGCTGTGTCGGTGT+TGG | + | chr6_3:92897982-92898001 | Msa0965490:intron | 55.0% |
TCGGTGAGAACCTGATGTGG+AGG | - | chr6_3:92891158-92891177 | None:intergenic | 55.0% | |
ACATGCACGGGTAAGGAAGC+CGG | - | chr6_3:92899952-92899971 | None:intergenic | 55.0% | |
CCCGGGACACACCTAATCGA+AGG | - | chr6_3:92889334-92889353 | None:intergenic | 60.0% | |
! | CTTGTCGGTGTCTGACACCC+GGG | - | chr6_3:92889351-92889370 | None:intergenic | 60.0% |
TCCCCGCAAGACGCAAGGTA+TGG | - | chr6_3:92889790-92889809 | None:intergenic | 60.0% | |
GGTGCAGGAGGATGAACTGC+TGG | + | chr6_3:92891106-92891125 | Msa0965490:intron | 60.0% | |
! | GCGTCGGTGAGAACCTGATG+TGG | - | chr6_3:92891161-92891180 | None:intergenic | 60.0% |
! | TCGAAGGTCGGACTGGACAC+AGG | - | chr6_3:92898016-92898035 | None:intergenic | 60.0% |
GAGGTAATCGTCGGTGGTGC+AGG | + | chr6_3:92899102-92899121 | Msa0965490:intron | 60.0% | |
GTAATCGTCGGTGGTGCAGG+AGG | + | chr6_3:92899105-92899124 | Msa0965490:intron | 60.0% | |
GGTGCAGGAGGATGAACTGC+TGG | + | chr6_3:92891106-92891125 | Msa0965490:intron | 60.0% | |
CGAGCGTGTACCTCCACATC+AGG | + | chr6_3:92899156-92899175 | Msa0965490:CDS | 60.0% | |
! | GCGTCGGTGAGAACCTGATG+TGG | - | chr6_3:92891161-92891180 | None:intergenic | 60.0% |
ATCCGGCCAAGTGAGACTGC+AGG | + | chr6_3:92899511-92899530 | Msa0965490:intron | 60.0% | |
TGCCTGCAGTCTCACTTGGC+CGG | - | chr6_3:92899516-92899535 | None:intergenic | 60.0% | |
CGTCATCCCCGCAAGACGCA+AGG | - | chr6_3:92889795-92889814 | None:intergenic | 65.0% | |
ATCCGGCCAAGTGAGACCGC+AGG | + | chr6_3:92892570-92892589 | Msa0965490:intron | 65.0% | |
TGCCTGCGGTCTCACTTGGC+CGG | - | chr6_3:92892575-92892594 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 92888730 | 92900317 | 92888730 | ID=Msa0965490;Name=Msa0965490 |
chr6_3 | mRNA | 92888730 | 92900317 | 92888730 | ID=Msa0965490-mRNA-1;Parent=Msa0965490;Name=Msa0965490-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.25|0.11|0.88|0.25|0.33|9|0|375 |
chr6_3 | exon | 92888730 | 92888966 | 92888730 | ID=Msa0965490-mRNA-1:exon:16976;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92888973 | 92889107 | 92888973 | ID=Msa0965490-mRNA-1:exon:16977;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92891113 | 92891226 | 92891113 | ID=Msa0965490-mRNA-1:exon:16978;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92892498 | 92892579 | 92892498 | ID=Msa0965490-mRNA-1:exon:16979;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92897050 | 92897268 | 92897050 | ID=Msa0965490-mRNA-1:exon:16980;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92897287 | 92897411 | 92897287 | ID=Msa0965490-mRNA-1:exon:16981;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92899124 | 92899237 | 92899124 | ID=Msa0965490-mRNA-1:exon:16982;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92899439 | 92899498 | 92899439 | ID=Msa0965490-mRNA-1:exon:16983;Parent=Msa0965490-mRNA-1 |
chr6_3 | exon | 92900276 | 92900317 | 92900276 | ID=Msa0965490-mRNA-1:exon:16984;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92888730 | 92888966 | 92888730 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92888973 | 92889107 | 92888973 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92891113 | 92891226 | 92891113 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92892498 | 92892579 | 92892498 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92897050 | 92897268 | 92897050 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92897287 | 92897411 | 92897287 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92899124 | 92899237 | 92899124 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92899439 | 92899498 | 92899439 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
chr6_3 | CDS | 92900276 | 92900317 | 92900276 | ID=Msa0965490-mRNA-1:cds;Parent=Msa0965490-mRNA-1 |
Gene Sequence |
Protein sequence |