Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142660 | AES64280.1 | 92.248 | 129 | 9 | 1 | 1 | 128 | 1 | 129 | 3.68e-77 | 234 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142660 | G7IFK5 | 92.248 | 129 | 9 | 1 | 1 | 128 | 1 | 129 | 1.76e-77 | 234 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0142660 | 0.805613 | 1.226800e-49 | -8.615850e-47 |
| Msa0011960 | Msa0142660 | 0.809013 | 2.334026e-50 | -8.615850e-47 |
| Msa0013050 | Msa0142660 | -0.802319 | 5.934575e-49 | -8.615850e-47 |
| Msa0017510 | Msa0142660 | 0.828604 | 8.196141e-55 | -8.615850e-47 |
| Msa0024210 | Msa0142660 | -0.801023 | 1.094709e-48 | -8.615850e-47 |
| Msa0025730 | Msa0142660 | 0.828272 | 9.859591e-55 | -8.615850e-47 |
| Msa0027260 | Msa0142660 | 0.819623 | 1.054025e-52 | -8.615850e-47 |
| Msa0029270 | Msa0142660 | 0.808667 | 2.766939e-50 | -8.615850e-47 |
| Msa0032090 | Msa0142660 | 0.801335 | 9.451001e-49 | -8.615850e-47 |
| Msa0032580 | Msa0142660 | 0.816804 | 4.577935e-52 | -8.615850e-47 |
| Msa0037700 | Msa0142660 | 0.831325 | 1.779168e-55 | -8.615850e-47 |
| Msa0040690 | Msa0142660 | 0.825132 | 5.538477e-54 | -8.615850e-47 |
| Msa0044540 | Msa0142660 | -0.820788 | 5.699536e-53 | -8.615850e-47 |
| Msa0047160 | Msa0142660 | 0.800350 | 1.501657e-48 | -8.615850e-47 |
| Msa0051770 | Msa0142660 | 0.802232 | 6.184718e-49 | -8.615850e-47 |
| Msa0052800 | Msa0142660 | 0.801244 | 9.868418e-49 | -8.615850e-47 |
| Msa0054480 | Msa0142660 | 0.823209 | 1.566941e-53 | -8.615850e-47 |
| Msa0081360 | Msa0142660 | 0.804737 | 1.871355e-49 | -8.615850e-47 |
| Msa0081480 | Msa0142660 | 0.807150 | 5.817065e-50 | -8.615850e-47 |
| Msa0086650 | Msa0142660 | 0.803101 | 4.093892e-49 | -8.615850e-47 |
| Msa0091210 | Msa0142660 | -0.805792 | 1.124974e-49 | -8.615850e-47 |
| Msa0094120 | Msa0142660 | 0.800633 | 1.315313e-48 | -8.615850e-47 |
| Msa0094470 | Msa0142660 | 0.817982 | 2.486118e-52 | -8.615850e-47 |
| Msa0101710 | Msa0142660 | 0.805081 | 1.585531e-49 | -8.615850e-47 |
| Msa0112750 | Msa0142660 | 0.807097 | 5.969774e-50 | -8.615850e-47 |
| Msa0127050 | Msa0142660 | 0.817948 | 2.529909e-52 | -8.615850e-47 |
| Msa0128860 | Msa0142660 | 0.806758 | 7.041802e-50 | -8.615850e-47 |
| Msa0133130 | Msa0142660 | 0.829999 | 3.757886e-55 | -8.615850e-47 |
| Msa0136070 | Msa0142660 | 0.828639 | 8.037442e-55 | -8.615850e-47 |
| Msa0136100 | Msa0142660 | 0.806518 | 7.913851e-50 | -8.615850e-47 |
| Msa0137550 | Msa0142660 | 0.800352 | 1.500403e-48 | -8.615850e-47 |
| Msa0140820 | Msa0142660 | 0.801128 | 1.042235e-48 | -8.615850e-47 |
| Msa0142660 | Msa0150820 | 0.822836 | 1.914018e-53 | -8.615850e-47 |
| Msa0142660 | Msa0157290 | 0.829228 | 5.790092e-55 | -8.615850e-47 |
| Msa0142660 | Msa0160550 | 0.818151 | 2.276917e-52 | -8.615850e-47 |
| Msa0142660 | Msa0165660 | 0.812562 | 3.983499e-51 | -8.615850e-47 |
| Msa0142660 | Msa0169310 | 0.808397 | 3.160657e-50 | -8.615850e-47 |
| Msa0142660 | Msa0171410 | 0.814285 | 1.665776e-51 | -8.615850e-47 |
| Msa0142660 | Msa0172070 | 0.803151 | 3.997129e-49 | -8.615850e-47 |
| Msa0142660 | Msa0172970 | 0.810552 | 1.089319e-50 | -8.615850e-47 |
| Msa0142660 | Msa0173990 | 0.831763 | 1.388122e-55 | -8.615850e-47 |
| Msa0142660 | Msa0174730 | 0.808270 | 3.362954e-50 | -8.615850e-47 |
| Msa0142660 | Msa0178590 | 0.803952 | 2.726684e-49 | -8.615850e-47 |
| Msa0142660 | Msa0184780 | 0.801570 | 8.458803e-49 | -8.615850e-47 |
| Msa0142660 | Msa0187120 | 0.815048 | 1.128689e-51 | -8.615850e-47 |
| Msa0142660 | Msa0188680 | -0.801198 | 1.008062e-48 | -8.615850e-47 |
| Msa0142660 | Msa0195460 | 0.974448 | 3.572494e-138 | -8.615850e-47 |
| Msa0142660 | Msa0197660 | 0.817010 | 4.114958e-52 | -8.615850e-47 |
| Msa0142660 | Msa0220720 | 0.837049 | 6.536247e-57 | -8.615850e-47 |
| Msa0142660 | Msa0222620 | 0.824422 | 8.142110e-54 | -8.615850e-47 |
| Msa0142660 | Msa0222890 | 0.809391 | 1.937000e-50 | -8.615850e-47 |
| Msa0142660 | Msa0225740 | 0.801620 | 8.260862e-49 | -8.615850e-47 |
| Msa0142660 | Msa0228070 | 0.818150 | 2.277165e-52 | -8.615850e-47 |
| Msa0142660 | Msa0229380 | 0.813085 | 3.059796e-51 | -8.615850e-47 |
| Msa0142660 | Msa0237260 | 0.971249 | 7.243528e-133 | -8.615850e-47 |
| Msa0142660 | Msa0239800 | 0.812557 | 3.992597e-51 | -8.615850e-47 |
| Msa0142660 | Msa0255080 | 0.808509 | 2.991366e-50 | -8.615850e-47 |
| Msa0142660 | Msa0259370 | 0.805410 | 1.352775e-49 | -8.615850e-47 |
| Msa0142660 | Msa0260680 | 0.811889 | 5.586751e-51 | -8.615850e-47 |
| Msa0142660 | Msa0260950 | -0.808100 | 3.655098e-50 | -8.615850e-47 |
| Msa0142660 | Msa0262310 | 0.828356 | 9.411127e-55 | -8.615850e-47 |
| Msa0142660 | Msa0264150 | 0.825588 | 4.319876e-54 | -8.615850e-47 |
| Msa0142660 | Msa0270220 | -0.800763 | 1.237107e-48 | -8.615850e-47 |
| Msa0142660 | Msa0271530 | 0.811361 | 7.275404e-51 | -8.615850e-47 |
| Msa0142660 | Msa0279790 | 0.809376 | 1.951168e-50 | -8.615850e-47 |
| Msa0142660 | Msa0280090 | 0.829371 | 5.343249e-55 | -8.615850e-47 |
| Msa0142660 | Msa0296740 | 0.803617 | 3.200494e-49 | -8.615850e-47 |
| Msa0142660 | Msa0299870 | 0.825210 | 5.307752e-54 | -8.615850e-47 |
| Msa0142660 | Msa0309750 | 0.808707 | 2.713710e-50 | -8.615850e-47 |
| Msa0142660 | Msa0309770 | 0.813162 | 2.943349e-51 | -8.615850e-47 |
| Msa0142660 | Msa0317510 | 0.818018 | 2.440070e-52 | -8.615850e-47 |
| Msa0142660 | Msa0336420 | 0.804734 | 1.873621e-49 | -8.615850e-47 |
| Msa0142660 | Msa0337240 | 0.809169 | 2.160928e-50 | -8.615850e-47 |
| Msa0142660 | Msa0337620 | 0.817235 | 3.664096e-52 | -8.615850e-47 |
| Msa0142660 | Msa0337650 | 0.805013 | 1.638728e-49 | -8.615850e-47 |
| Msa0142660 | Msa0339250 | 0.801212 | 1.001781e-48 | -8.615850e-47 |
| Msa0142660 | Msa0351030 | 0.801249 | 9.844997e-49 | -8.615850e-47 |
| Msa0142660 | Msa0366890 | 0.800691 | 1.279854e-48 | -8.615850e-47 |
| Msa0142660 | Msa0385580 | 0.842445 | 2.575004e-58 | -8.615850e-47 |
| Msa0142660 | Msa0398950 | 0.805262 | 1.453057e-49 | -8.615850e-47 |
| Msa0142660 | Msa0402650 | 0.801205 | 1.004917e-48 | -8.615850e-47 |
| Msa0142660 | Msa0419820 | 0.808146 | 3.573967e-50 | -8.615850e-47 |
| Msa0142660 | Msa0428080 | 0.808179 | 3.516304e-50 | -8.615850e-47 |
| Msa0142660 | Msa0436490 | -0.800411 | 1.459561e-48 | -8.615850e-47 |
| Msa0142660 | Msa0437560 | 0.802818 | 4.684184e-49 | -8.615850e-47 |
| Msa0142660 | Msa0479660 | 0.818974 | 1.480965e-52 | -8.615850e-47 |
| Msa0142660 | Msa0481530 | 0.825979 | 3.488806e-54 | -8.615850e-47 |
| Msa0142660 | Msa0483860 | 0.804314 | 2.292232e-49 | -8.615850e-47 |
| Msa0142660 | Msa0503580 | 0.811845 | 5.710477e-51 | -8.615850e-47 |
| Msa0142660 | Msa0504020 | 0.810440 | 1.151328e-50 | -8.615850e-47 |
| Msa0142660 | Msa0509390 | 0.802768 | 4.795655e-49 | -8.615850e-47 |
| Msa0142660 | Msa0511310 | 0.806195 | 9.255213e-50 | -8.615850e-47 |
| Msa0142660 | Msa0512750 | 0.804142 | 2.489434e-49 | -8.615850e-47 |
| Msa0142660 | Msa0519740 | 0.802264 | 6.092693e-49 | -8.615850e-47 |
| Msa0142660 | Msa0529890 | 0.819808 | 9.559355e-53 | -8.615850e-47 |
| Msa0142660 | Msa0547360 | 0.814175 | 1.761445e-51 | -8.615850e-47 |
| Msa0142660 | Msa0547720 | 0.808710 | 2.709824e-50 | -8.615850e-47 |
| Msa0142660 | Msa0577500 | 0.805092 | 1.577180e-49 | -8.615850e-47 |
| Msa0142660 | Msa0585560 | 0.822250 | 2.619040e-53 | -8.615850e-47 |
| Msa0142660 | Msa0590990 | 0.803150 | 3.998991e-49 | -8.615850e-47 |
| Msa0142660 | Msa0607050 | 0.829611 | 4.672586e-55 | -8.615850e-47 |
| Msa0142660 | Msa0610430 | 0.838049 | 3.621973e-57 | -8.615850e-47 |
| Msa0142660 | Msa0615440 | 0.804712 | 1.893673e-49 | -8.615850e-47 |
| Msa0142660 | Msa0621490 | 0.804029 | 2.628231e-49 | -8.615850e-47 |
| Msa0142660 | Msa0623080 | 0.801547 | 8.551239e-49 | -8.615850e-47 |
| Msa0142660 | Msa0625720 | 0.818330 | 2.073926e-52 | -8.615850e-47 |
| Msa0142660 | Msa0633840 | 0.803543 | 3.315773e-49 | -8.615850e-47 |
| Msa0142660 | Msa0643220 | 0.802576 | 5.255139e-49 | -8.615850e-47 |
| Msa0142660 | Msa0643560 | 0.811959 | 5.393984e-51 | -8.615850e-47 |
| Msa0142660 | Msa0647500 | 0.805918 | 1.058367e-49 | -8.615850e-47 |
| Msa0142660 | Msa0657970 | 0.810721 | 1.001216e-50 | -8.615850e-47 |
| Msa0142660 | Msa0661190 | -0.813300 | 2.744138e-51 | -8.615850e-47 |
| Msa0142660 | Msa0663390 | 0.825864 | 3.714769e-54 | -8.615850e-47 |
| Msa0142660 | Msa0673460 | 0.804177 | 2.448267e-49 | -8.615850e-47 |
| Msa0142660 | Msa0682900 | 0.817963 | 2.510569e-52 | -8.615850e-47 |
| Msa0142660 | Msa0684500 | 0.815605 | 8.487672e-52 | -8.615850e-47 |
| Msa0142660 | Msa0689260 | 0.816560 | 5.192993e-52 | -8.615850e-47 |
| Msa0142660 | Msa0690150 | 0.811326 | 7.404975e-51 | -8.615850e-47 |
| Msa0142660 | Msa0691900 | 0.818566 | 1.833485e-52 | -8.615850e-47 |
| Msa0142660 | Msa0692830 | 0.808761 | 2.641589e-50 | -8.615850e-47 |
| Msa0142660 | Msa0692950 | 0.807045 | 6.123383e-50 | -8.615850e-47 |
| Msa0142660 | Msa0697940 | 0.802050 | 6.742210e-49 | -8.615850e-47 |
| Msa0142660 | Msa0698060 | 0.801962 | 7.027909e-49 | -8.615850e-47 |
| Msa0142660 | Msa0698490 | 0.811338 | 7.361471e-51 | -8.615850e-47 |
| Msa0142660 | Msa0698660 | 0.811505 | 6.771153e-51 | -8.615850e-47 |
| Msa0142660 | Msa0709500 | 0.837355 | 5.458466e-57 | -8.615850e-47 |
| Msa0142660 | Msa0711780 | 0.810222 | 1.283343e-50 | -8.615850e-47 |
| Msa0142660 | Msa0715700 | 0.830144 | 3.465144e-55 | -8.615850e-47 |
| Msa0142660 | Msa0727710 | 0.806323 | 8.696717e-50 | -8.615850e-47 |
| Msa0142660 | Msa0743720 | 0.837442 | 5.184965e-57 | -8.615850e-47 |
| Msa0142660 | Msa0745790 | 0.812505 | 4.099210e-51 | -8.615850e-47 |
| Msa0142660 | Msa0750880 | 0.819166 | 1.339776e-52 | -8.615850e-47 |
| Msa0142660 | Msa0790390 | -0.802227 | 6.201647e-49 | -8.615850e-47 |
| Msa0142660 | Msa0790660 | -0.845212 | 4.676247e-59 | -8.615850e-47 |
| Msa0142660 | Msa0790850 | 0.835996 | 1.212032e-56 | -8.615850e-47 |
| Msa0142660 | Msa0793800 | 0.830953 | 2.196587e-55 | -8.615850e-47 |
| Msa0142660 | Msa0794670 | 0.816566 | 5.177892e-52 | -8.615850e-47 |
| Msa0142660 | Msa0796530 | 0.823928 | 1.063362e-53 | -8.615850e-47 |
| Msa0142660 | Msa0808080 | 0.819657 | 1.035177e-52 | -8.615850e-47 |
| Msa0142660 | Msa0808270 | 0.823313 | 1.481086e-53 | -8.615850e-47 |
| Msa0142660 | Msa0813720 | 0.817652 | 2.951390e-52 | -8.615850e-47 |
| Msa0142660 | Msa0813740 | 0.837970 | 3.795662e-57 | -8.615850e-47 |
| Msa0142660 | Msa0824680 | 0.806301 | 8.791842e-50 | -8.615850e-47 |
| Msa0142660 | Msa0827040 | 0.802813 | 4.695565e-49 | -8.615850e-47 |
| Msa0142660 | Msa0871270 | 0.808770 | 2.630995e-50 | -8.615850e-47 |
| Msa0142660 | Msa0876200 | 0.806524 | 7.889134e-50 | -8.615850e-47 |
| Msa0142660 | Msa0880140 | 0.826571 | 2.522271e-54 | -8.615850e-47 |
| Msa0142660 | Msa0902760 | 0.846371 | 2.265015e-59 | -8.615850e-47 |
| Msa0142660 | Msa0936340 | 0.810480 | 1.128607e-50 | -8.615850e-47 |
| Msa0142660 | Msa0938220 | 0.822792 | 1.960142e-53 | -8.615850e-47 |
| Msa0142660 | Msa0947660 | 0.807861 | 4.110137e-50 | -8.615850e-47 |
| Msa0142660 | Msa0959360 | 0.808540 | 2.945265e-50 | -8.615850e-47 |
| Msa0142660 | Msa0965490 | 0.801283 | 9.685679e-49 | -8.615850e-47 |
| Msa0142660 | Msa0968590 | 0.817894 | 2.602274e-52 | -8.615850e-47 |
| Msa0142660 | Msa0969520 | 0.802109 | 6.555507e-49 | -8.615850e-47 |
| Msa0142660 | Msa0970030 | 0.830971 | 2.174014e-55 | -8.615850e-47 |
| Msa0142660 | Msa0970420 | 0.826470 | 2.665934e-54 | -8.615850e-47 |
| Msa0142660 | Msa0974070 | 0.800535 | 1.377058e-48 | -8.615850e-47 |
| Msa0142660 | Msa0978250 | 0.804273 | 2.338128e-49 | -8.615850e-47 |
| Msa0142660 | Msa0993290 | 0.818603 | 1.798187e-52 | -8.615850e-47 |
| Msa0142660 | Msa0993330 | 0.806741 | 7.099469e-50 | -8.615850e-47 |
| Msa0142660 | Msa0993600 | 0.813182 | 2.913226e-51 | -8.615850e-47 |
| Msa0142660 | Msa0999970 | 0.800256 | 1.569820e-48 | -8.615850e-47 |
| Msa0142660 | Msa1003030 | 0.802298 | 5.995832e-49 | -8.615850e-47 |
| Msa0142660 | Msa1006840 | 0.832436 | 9.461526e-56 | -8.615850e-47 |
| Msa0142660 | Msa1013400 | 0.845961 | 2.928687e-59 | -8.615850e-47 |
| Msa0142660 | Msa1033410 | -0.800946 | 1.135070e-48 | -8.615850e-47 |
| Msa0142660 | Msa1040400 | 0.811875 | 5.626321e-51 | -8.615850e-47 |
| Msa0142660 | Msa1046020 | 0.806722 | 7.165300e-50 | -8.615850e-47 |
| Msa0142660 | Msa1046060 | 0.811107 | 8.258339e-51 | -8.615850e-47 |
| Msa0142660 | Msa1051200 | 0.827993 | 1.150734e-54 | -8.615850e-47 |
| Msa0142660 | Msa1066490 | 0.814235 | 1.708393e-51 | -8.615850e-47 |
| Msa0142660 | Msa1073070 | -0.805138 | 1.542721e-49 | -8.615850e-47 |
| Msa0142660 | Msa1081150 | 0.829605 | 4.688264e-55 | -8.615850e-47 |
| Msa0142660 | Msa1084470 | 0.817389 | 3.381636e-52 | -8.615850e-47 |
| Msa0142660 | Msa1087710 | 0.804915 | 1.717705e-49 | -8.615850e-47 |
| Msa0142660 | Msa1093530 | 0.846972 | 1.552568e-59 | -8.615850e-47 |
| Msa0142660 | Msa1104140 | 0.826570 | 2.523412e-54 | -8.615850e-47 |
| Msa0142660 | Msa1121440 | 0.805067 | 1.596695e-49 | -8.615850e-47 |
| Msa0142660 | Msa1123380 | 0.806657 | 7.394376e-50 | -8.615850e-47 |
| Msa0142660 | Msa1125760 | 0.827628 | 1.408867e-54 | -8.615850e-47 |
| Msa0142660 | Msa1131220 | 0.806154 | 9.440549e-50 | -8.615850e-47 |
| Msa0142660 | Msa1147900 | 0.824470 | 7.932594e-54 | -8.615850e-47 |
| Msa0142660 | Msa1171360 | 0.839602 | 1.436607e-57 | -8.615850e-47 |
| Msa0142660 | Msa1193290 | 0.814739 | 1.321787e-51 | -8.615850e-47 |
| Msa0142660 | Msa1199220 | 0.807778 | 4.281404e-50 | -8.615850e-47 |
| Msa0142660 | Msa1207270 | 0.817692 | 2.890917e-52 | -8.615850e-47 |
| Msa0142660 | Msa1210020 | 0.816888 | 4.383759e-52 | -8.615850e-47 |
| Msa0142660 | Msa1214890 | 0.803924 | 2.763449e-49 | -8.615850e-47 |
| Msa0142660 | Msa1218600 | 0.838730 | 2.418088e-57 | -8.615850e-47 |
| Msa0142660 | Msa1237940 | 0.804673 | 1.929667e-49 | -8.615850e-47 |
| Msa0142660 | Msa1253020 | 0.803732 | 3.029615e-49 | -8.615850e-47 |
| Msa0142660 | Msa1255040 | -0.812317 | 4.504818e-51 | -8.615850e-47 |
| Msa0142660 | Msa1259490 | -0.807501 | 4.900318e-50 | -8.615850e-47 |
| Msa0142660 | Msa1265630 | 0.801525 | 8.642869e-49 | -8.615850e-47 |
| Msa0142660 | Msa1294820 | 0.802957 | 4.383436e-49 | -8.615850e-47 |
| Msa0142660 | Msa1295490 | -0.801020 | 1.096419e-48 | -8.615850e-47 |
| Msa0142660 | Msa1298510 | 0.802766 | 4.801782e-49 | -8.615850e-47 |
| Msa0142660 | Msa1299180 | -0.808966 | 2.388343e-50 | -8.615850e-47 |
| Msa0142660 | Msa1305340 | 0.807286 | 5.442625e-50 | -8.615850e-47 |
| Msa0142660 | Msa1306840 | 0.802644 | 5.087026e-49 | -8.615850e-47 |
| Msa0142660 | Msa1331910 | 0.801985 | 6.952883e-49 | -8.615850e-47 |
| Msa0142660 | Msa1332040 | -0.816982 | 4.176105e-52 | -8.615850e-47 |
| Msa0142660 | Msa1344130 | 0.806030 | 1.002471e-49 | -8.615850e-47 |
| Msa0142660 | Msa1353060 | 0.816120 | 6.513062e-52 | -8.615850e-47 |
| Msa0142660 | Msa1353330 | 0.801449 | 8.957107e-49 | -8.615850e-47 |
| Msa0142660 | Msa1356440 | 0.828117 | 1.074386e-54 | -8.615850e-47 |
| Msa0142660 | Msa1358250 | 0.818277 | 2.131453e-52 | -8.615850e-47 |
| Msa0142660 | Msa1374120 | 0.813903 | 2.021790e-51 | -8.615850e-47 |
| Msa0142660 | Msa1379760 | 0.802515 | 5.408453e-49 | -8.615850e-47 |
| Msa0142660 | Msa1385460 | 0.822683 | 2.077274e-53 | -8.615850e-47 |
| Msa0142660 | Msa1385670 | 0.804483 | 2.114195e-49 | -8.615850e-47 |
| Msa0142660 | Msa1386780 | 0.809876 | 1.523802e-50 | -8.615850e-47 |
| Msa0142660 | Msa1392780 | 0.807602 | 4.664692e-50 | -8.615850e-47 |
| Msa0142660 | Msa1394290 | 0.830316 | 3.146305e-55 | -8.615850e-47 |
| Msa0142660 | Msa1394500 | 0.801220 | 9.977023e-49 | -8.615850e-47 |
| Msa0142660 | Msa1424750 | 0.833078 | 6.554414e-56 | -8.615850e-47 |
| Msa0142660 | Msa1440000 | 0.800069 | 1.713315e-48 | -8.615850e-47 |
| Msa0142660 | Msa1444310 | 0.811256 | 7.667102e-51 | -8.615850e-47 |
| Msa0142660 | Msa1449250 | -0.807732 | 4.378742e-50 | -8.615850e-47 |
| Msa0142660 | Msa1449820 | 0.806201 | 9.229786e-50 | -8.615850e-47 |
| Msa0142660 | Msa1451160 | 0.809343 | 1.982910e-50 | -8.615850e-47 |
| Msa0142660 | Msa1457920 | 0.834146 | 3.547234e-56 | -8.615850e-47 |
| Msa0142660 | Msa1466540 | 0.819890 | 9.156496e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0142660 | MtrunA17_Chr2g0286621 | 92.248 | 129 | 9 | 1 | 1 | 128 | 1 | 129 | 3.38e-81 | 234 |
| Msa0142660 | MtrunA17_Chr2g0286631 | 80.435 | 138 | 17 | 3 | 1 | 128 | 1 | 138 | 1.77e-57 | 174 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 31 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAATGGTTAATGTTAATT+TGG | 0.155770 | 1_4:+1604524 | Msa0142660:CDS |
| GATTCTGAAGGTGACCTTAT+TGG | 0.270756 | 1_4:+1604270 | Msa0142660:CDS |
| AAGGAAGATGAGAATGATAA+AGG | 0.271877 | 1_4:+1604396 | Msa0142660:CDS |
| TCATAAAGAAATGAATGATA+TGG | 0.276443 | 1_4:+1604206 | None:intergenic |
| ATGTTGATGATAAACTATTT+TGG | 0.278652 | 1_4:+1604550 | Msa0142660:CDS |
| TACCCTGCTGCTAATTACTT+TGG | 0.359178 | 1_4:+1604306 | Msa0142660:CDS |
| TTCATCTTTGTTGCTTATTG+AGG | 0.383420 | 1_4:+1604239 | Msa0142660:CDS |
| ATAGAGTAAAGAAGCCAATA+AGG | 0.396823 | 1_4:-1604284 | None:intergenic |
| ACCCTGCTGCTAATTACTTT+GGG | 0.397321 | 1_4:+1604307 | Msa0142660:CDS |
| TGGGAGATATGTATGGAAGT+AGG | 0.434821 | 1_4:+1604570 | Msa0142660:CDS |
| GGGAGATATGTATGGAAGTA+GGG | 0.453186 | 1_4:+1604571 | Msa0142660:CDS |
| TGGTATGTGTAGCTTAGTTA+AGG | 0.466313 | 1_4:+1604377 | Msa0142660:CDS |
| AGGAAGATGAGAATGATAAA+GGG | 0.474639 | 1_4:+1604397 | Msa0142660:CDS |
| GATGAGAATGATAAAGGGTC+AGG | 0.478591 | 1_4:+1604402 | Msa0142660:CDS |
| TGCTAATTACTTTGGGCACA+AGG | 0.479009 | 1_4:+1604314 | Msa0142660:CDS |
| TGCCCAAAGTAATTAGCAGC+AGG | 0.488758 | 1_4:-1604309 | None:intergenic |
| TCCTCATCATCAACAAGTAA+AGG | 0.503410 | 1_4:-1604495 | None:intergenic |
| ACCTTTACTTGTTGATGATG+AGG | 0.506285 | 1_4:+1604494 | Msa0142660:CDS |
| ACCATCATTGTCACCCTCAC+AGG | 0.527345 | 1_4:-1604358 | None:intergenic |
| AGAAGAGCATTCTATTTCCA+TGG | 0.535708 | 1_4:-1604469 | None:intergenic |
| TGATGAGGAGGAAATAAGAA+TGG | 0.564678 | 1_4:+1604509 | Msa0142660:CDS |
| TTTACTTGTTGATGATGAGG+AGG | 0.584354 | 1_4:+1604497 | Msa0142660:CDS |
| GTGGTTATCAGATGCAACCA+TGG | 0.627194 | 1_4:+1604452 | Msa0142660:CDS |
| ACCTGTGAGGGTGACAATGA+TGG | 0.639274 | 1_4:+1604357 | Msa0142660:CDS |
| GAGGACAGTGCAGATTCTGA+AGG | 0.642136 | 1_4:+1604258 | Msa0142660:CDS |
| GCCCAAAGTAATTAGCAGCA+GGG | 0.657577 | 1_4:-1604308 | None:intergenic |
| GCTGAGTCATGTACCTGTGA+GGG | 0.671916 | 1_4:+1604345 | Msa0142660:CDS |
| TGCTGAGTCATGTACCTGTG+AGG | 0.698564 | 1_4:+1604344 | Msa0142660:CDS |
| GGTTGCATCTGATAACCACA+TGG | 0.727761 | 1_4:-1604448 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAATGGTTAATGTTAATT+TGG | + | chr1_4:1604524-1604543 | Msa0142660:CDS | 20.0% |
| !!! | ATGTTGATGATAAACTATTT+TGG | + | chr1_4:1604550-1604569 | Msa0142660:CDS | 20.0% |
| !!! | TGTTGATGATAAACTATTTT+GGG | + | chr1_4:1604551-1604570 | Msa0142660:CDS | 20.0% |
| ! | TTCATCTTTGTTGCTTATTG+AGG | + | chr1_4:1604239-1604258 | Msa0142660:CDS | 30.0% |
| ATAGAGTAAAGAAGCCAATA+AGG | - | chr1_4:1604287-1604306 | None:intergenic | 30.0% | |
| AAGGAAGATGAGAATGATAA+AGG | + | chr1_4:1604396-1604415 | Msa0142660:CDS | 30.0% | |
| AGGAAGATGAGAATGATAAA+GGG | + | chr1_4:1604397-1604416 | Msa0142660:CDS | 30.0% | |
| !! | ACTATTTTGGGAGATATGTA+TGG | + | chr1_4:1604563-1604582 | Msa0142660:CDS | 30.0% |
| TGGTATGTGTAGCTTAGTTA+AGG | + | chr1_4:1604377-1604396 | Msa0142660:CDS | 35.0% | |
| !! | AGAAGAGCATTCTATTTCCA+TGG | - | chr1_4:1604472-1604491 | None:intergenic | 35.0% |
| !! | ACCTTTACTTGTTGATGATG+AGG | + | chr1_4:1604494-1604513 | Msa0142660:CDS | 35.0% |
| TCCTCATCATCAACAAGTAA+AGG | - | chr1_4:1604498-1604517 | None:intergenic | 35.0% | |
| !! | TTTACTTGTTGATGATGAGG+AGG | + | chr1_4:1604497-1604516 | Msa0142660:CDS | 35.0% |
| TGATGAGGAGGAAATAAGAA+TGG | + | chr1_4:1604509-1604528 | Msa0142660:CDS | 35.0% | |
| ! | GATTCTGAAGGTGACCTTAT+TGG | + | chr1_4:1604270-1604289 | Msa0142660:CDS | 40.0% |
| TACCCTGCTGCTAATTACTT+TGG | + | chr1_4:1604306-1604325 | Msa0142660:CDS | 40.0% | |
| ACCCTGCTGCTAATTACTTT+GGG | + | chr1_4:1604307-1604326 | Msa0142660:CDS | 40.0% | |
| TGCTAATTACTTTGGGCACA+AGG | + | chr1_4:1604314-1604333 | Msa0142660:CDS | 40.0% | |
| GATGAGAATGATAAAGGGTC+AGG | + | chr1_4:1604402-1604421 | Msa0142660:CDS | 40.0% | |
| TGGGAGATATGTATGGAAGT+AGG | + | chr1_4:1604570-1604589 | Msa0142660:CDS | 40.0% | |
| GGGAGATATGTATGGAAGTA+GGG | + | chr1_4:1604571-1604590 | Msa0142660:CDS | 40.0% | |
| GCCCAAAGTAATTAGCAGCA+GGG | - | chr1_4:1604311-1604330 | None:intergenic | 45.0% | |
| TGCCCAAAGTAATTAGCAGC+AGG | - | chr1_4:1604312-1604331 | None:intergenic | 45.0% | |
| !!! | GCTGTTTTAGCTCTACCATG+TGG | + | chr1_4:1604433-1604452 | Msa0142660:CDS | 45.0% |
| GGTTGCATCTGATAACCACA+TGG | - | chr1_4:1604451-1604470 | None:intergenic | 45.0% | |
| GTGGTTATCAGATGCAACCA+TGG | + | chr1_4:1604452-1604471 | Msa0142660:CDS | 45.0% | |
| GAGGACAGTGCAGATTCTGA+AGG | + | chr1_4:1604258-1604277 | Msa0142660:CDS | 50.0% | |
| TGCTGAGTCATGTACCTGTG+AGG | + | chr1_4:1604344-1604363 | Msa0142660:CDS | 50.0% | |
| GCTGAGTCATGTACCTGTGA+GGG | + | chr1_4:1604345-1604364 | Msa0142660:CDS | 50.0% | |
| ACCTGTGAGGGTGACAATGA+TGG | + | chr1_4:1604357-1604376 | Msa0142660:CDS | 50.0% | |
| ACCATCATTGTCACCCTCAC+AGG | - | chr1_4:1604361-1604380 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 1604216 | 1604602 | 1604216 | ID=Msa0142660;Name=Msa0142660 |
| chr1_4 | mRNA | 1604216 | 1604602 | 1604216 | ID=Msa0142660-mRNA-1;Parent=Msa0142660;Name=Msa0142660-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|-1|0|1|-1|1|1|0|128 |
| chr1_4 | exon | 1604216 | 1604602 | 1604216 | ID=Msa0142660-mRNA-1:exon:600;Parent=Msa0142660-mRNA-1 |
| chr1_4 | CDS | 1604216 | 1604602 | 1604216 | ID=Msa0142660-mRNA-1:cds;Parent=Msa0142660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
