Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245650 | XP_003595238.1 | 91.943 | 422 | 7 | 1 | 1 | 395 | 1 | 422 | 0.0 | 799 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245650 | sp|Q9LTR9|NMT1_ARATH | 76.627 | 415 | 70 | 1 | 8 | 395 | 20 | 434 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245650 | A2Q693 | 91.943 | 422 | 7 | 1 | 1 | 395 | 1 | 422 | 0.0 | 799 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003720 | Msa0245650 | 0.839900 | 1.201574e-57 | -8.615850e-47 |
| Msa0022750 | Msa0245650 | -0.801215 | 1.000402e-48 | -8.615850e-47 |
| Msa0040620 | Msa0245650 | 0.801462 | 8.901497e-49 | -8.615850e-47 |
| Msa0041690 | Msa0245650 | 0.816223 | 6.176577e-52 | -8.615850e-47 |
| Msa0051020 | Msa0245650 | 0.813801 | 2.129554e-51 | -8.615850e-47 |
| Msa0059040 | Msa0245650 | 0.812051 | 5.148517e-51 | -8.615850e-47 |
| Msa0059110 | Msa0245650 | 0.817449 | 3.278814e-52 | -8.615850e-47 |
| Msa0090360 | Msa0245650 | 0.806722 | 7.165416e-50 | -8.615850e-47 |
| Msa0101270 | Msa0245650 | 0.819113 | 1.377403e-52 | -8.615850e-47 |
| Msa0103250 | Msa0245650 | 0.800321 | 1.522772e-48 | -8.615850e-47 |
| Msa0105520 | Msa0245650 | 0.827918 | 1.199594e-54 | -8.615850e-47 |
| Msa0106620 | Msa0245650 | 0.821372 | 4.181172e-53 | -8.615850e-47 |
| Msa0106710 | Msa0245650 | 0.820558 | 6.437391e-53 | -8.615850e-47 |
| Msa0130720 | Msa0245650 | 0.804229 | 2.387792e-49 | -8.615850e-47 |
| Msa0138360 | Msa0245650 | 0.810384 | 1.184052e-50 | -8.615850e-47 |
| Msa0138500 | Msa0245650 | 0.806973 | 6.340003e-50 | -8.615850e-47 |
| Msa0138520 | Msa0245650 | 0.807702 | 4.443130e-50 | -8.615850e-47 |
| Msa0144360 | Msa0245650 | 0.805236 | 1.471327e-49 | -8.615850e-47 |
| Msa0145580 | Msa0245650 | 0.814158 | 1.776272e-51 | -8.615850e-47 |
| Msa0146280 | Msa0245650 | 0.821941 | 3.088261e-53 | -8.615850e-47 |
| Msa0180500 | Msa0245650 | 0.804385 | 2.215719e-49 | -8.615850e-47 |
| Msa0183760 | Msa0245650 | 0.807128 | 5.878746e-50 | -8.615850e-47 |
| Msa0184040 | Msa0245650 | 0.803242 | 3.827835e-49 | -8.615850e-47 |
| Msa0188350 | Msa0245650 | 0.808680 | 2.749564e-50 | -8.615850e-47 |
| Msa0188690 | Msa0245650 | 0.801666 | 8.083304e-49 | -8.615850e-47 |
| Msa0192640 | Msa0245650 | 0.801390 | 9.208052e-49 | -8.615850e-47 |
| Msa0202410 | Msa0245650 | 0.815177 | 1.056662e-51 | -8.615850e-47 |
| Msa0204960 | Msa0245650 | 0.818387 | 2.013100e-52 | -8.615850e-47 |
| Msa0205010 | Msa0245650 | 0.812242 | 4.678522e-51 | -8.615850e-47 |
| Msa0206690 | Msa0245650 | 0.822554 | 2.226383e-53 | -8.615850e-47 |
| Msa0207350 | Msa0245650 | 0.800831 | 1.198059e-48 | -8.615850e-47 |
| Msa0212930 | Msa0245650 | 0.804258 | 2.354979e-49 | -8.615850e-47 |
| Msa0220730 | Msa0245650 | 0.800057 | 1.722832e-48 | -8.615850e-47 |
| Msa0223330 | Msa0245650 | 0.802387 | 5.746740e-49 | -8.615850e-47 |
| Msa0230150 | Msa0245650 | 0.803718 | 3.049903e-49 | -8.615850e-47 |
| Msa0241830 | Msa0245650 | 0.820275 | 7.474350e-53 | -8.615850e-47 |
| Msa0245430 | Msa0245650 | 0.803666 | 3.126425e-49 | -8.615850e-47 |
| Msa0245650 | Msa0249580 | 0.835177 | 1.953040e-56 | -8.615850e-47 |
| Msa0245650 | Msa0259210 | 0.821085 | 4.870567e-53 | -8.615850e-47 |
| Msa0245650 | Msa0271530 | 0.813935 | 1.989784e-51 | -8.615850e-47 |
| Msa0245650 | Msa0275360 | 0.808473 | 3.044444e-50 | -8.615850e-47 |
| Msa0245650 | Msa0276630 | 0.867545 | 1.264900e-65 | -8.615850e-47 |
| Msa0245650 | Msa0279850 | 0.801352 | 9.375842e-49 | -8.615850e-47 |
| Msa0245650 | Msa0281530 | 0.822818 | 1.933060e-53 | -8.615850e-47 |
| Msa0245650 | Msa0283420 | 0.800859 | 1.182870e-48 | -8.615850e-47 |
| Msa0245650 | Msa0288080 | 0.845102 | 5.006018e-59 | -8.615850e-47 |
| Msa0245650 | Msa0307850 | 0.829470 | 5.056601e-55 | -8.615850e-47 |
| Msa0245650 | Msa0317970 | 0.815586 | 8.569892e-52 | -8.615850e-47 |
| Msa0245650 | Msa0320590 | 0.805717 | 1.166427e-49 | -8.615850e-47 |
| Msa0245650 | Msa0321690 | 0.815664 | 8.232722e-52 | -8.615850e-47 |
| Msa0245650 | Msa0322240 | 0.803446 | 3.472139e-49 | -8.615850e-47 |
| Msa0245650 | Msa0322900 | 0.837648 | 4.590974e-57 | -8.615850e-47 |
| Msa0245650 | Msa0326480 | 0.840600 | 7.888724e-58 | -8.615850e-47 |
| Msa0245650 | Msa0330310 | 0.813094 | 3.045688e-51 | -8.615850e-47 |
| Msa0245650 | Msa0330340 | 0.801900 | 7.238535e-49 | -8.615850e-47 |
| Msa0245650 | Msa0336310 | 0.802225 | 6.205614e-49 | -8.615850e-47 |
| Msa0245650 | Msa0336320 | 0.819860 | 9.302329e-53 | -8.615850e-47 |
| Msa0245650 | Msa0357900 | 0.846479 | 2.116293e-59 | -8.615850e-47 |
| Msa0245650 | Msa0359030 | 0.800209 | 1.604153e-48 | -8.615850e-47 |
| Msa0245650 | Msa0382370 | 0.805413 | 1.351088e-49 | -8.615850e-47 |
| Msa0245650 | Msa0388700 | 0.804909 | 1.722393e-49 | -8.615850e-47 |
| Msa0245650 | Msa0388990 | 0.801237 | 9.899361e-49 | -8.615850e-47 |
| Msa0245650 | Msa0395980 | 0.803728 | 3.035363e-49 | -8.615850e-47 |
| Msa0245650 | Msa0410870 | 0.817046 | 4.039239e-52 | -8.615850e-47 |
| Msa0245650 | Msa0419720 | 0.806043 | 9.963096e-50 | -8.615850e-47 |
| Msa0245650 | Msa0450400 | -0.832388 | 9.724700e-56 | -8.615850e-47 |
| Msa0245650 | Msa0476680 | 0.801980 | 6.971257e-49 | -8.615850e-47 |
| Msa0245650 | Msa0481970 | 0.814128 | 1.804144e-51 | -8.615850e-47 |
| Msa0245650 | Msa0485240 | 0.816717 | 4.789022e-52 | -8.615850e-47 |
| Msa0245650 | Msa0491000 | 0.816777 | 4.641502e-52 | -8.615850e-47 |
| Msa0245650 | Msa0518030 | 0.829443 | 5.132153e-55 | -8.615850e-47 |
| Msa0245650 | Msa0521010 | 0.806764 | 7.021689e-50 | -8.615850e-47 |
| Msa0245650 | Msa0524500 | 0.813566 | 2.398731e-51 | -8.615850e-47 |
| Msa0245650 | Msa0527020 | 0.800634 | 1.314587e-48 | -8.615850e-47 |
| Msa0245650 | Msa0527190 | 0.809748 | 1.623391e-50 | -8.615850e-47 |
| Msa0245650 | Msa0529890 | 0.803905 | 2.789375e-49 | -8.615850e-47 |
| Msa0245650 | Msa0531250 | 0.816798 | 4.593333e-52 | -8.615850e-47 |
| Msa0245650 | Msa0534400 | 0.803663 | 3.130199e-49 | -8.615850e-47 |
| Msa0245650 | Msa0539530 | -0.803894 | 2.802885e-49 | -8.615850e-47 |
| Msa0245650 | Msa0542290 | 0.833944 | 3.985095e-56 | -8.615850e-47 |
| Msa0245650 | Msa0547990 | 0.800557 | 1.362979e-48 | -8.615850e-47 |
| Msa0245650 | Msa0556010 | 0.802286 | 6.028613e-49 | -8.615850e-47 |
| Msa0245650 | Msa0556060 | 0.813772 | 2.161185e-51 | -8.615850e-47 |
| Msa0245650 | Msa0574390 | 0.800453 | 1.430814e-48 | -8.615850e-47 |
| Msa0245650 | Msa0581110 | 0.808222 | 3.444221e-50 | -8.615850e-47 |
| Msa0245650 | Msa0585560 | 0.803060 | 4.174084e-49 | -8.615850e-47 |
| Msa0245650 | Msa0588090 | 0.805410 | 1.352735e-49 | -8.615850e-47 |
| Msa0245650 | Msa0601530 | 0.806969 | 6.353001e-50 | -8.615850e-47 |
| Msa0245650 | Msa0628420 | 0.812848 | 3.448569e-51 | -8.615850e-47 |
| Msa0245650 | Msa0640940 | 0.803636 | 3.172007e-49 | -8.615850e-47 |
| Msa0245650 | Msa0642970 | 0.818214 | 2.203028e-52 | -8.615850e-47 |
| Msa0245650 | Msa0644800 | 0.807428 | 5.078597e-50 | -8.615850e-47 |
| Msa0245650 | Msa0663390 | 0.802875 | 4.559446e-49 | -8.615850e-47 |
| Msa0245650 | Msa0669520 | 0.825148 | 5.490287e-54 | -8.615850e-47 |
| Msa0245650 | Msa0679360 | 0.802342 | 5.871935e-49 | -8.615850e-47 |
| Msa0245650 | Msa0705190 | 0.807632 | 4.597434e-50 | -8.615850e-47 |
| Msa0245650 | Msa0707250 | 0.802929 | 4.442688e-49 | -8.615850e-47 |
| Msa0245650 | Msa0709160 | 0.817173 | 3.783456e-52 | -8.615850e-47 |
| Msa0245650 | Msa0721280 | 0.816823 | 4.532771e-52 | -8.615850e-47 |
| Msa0245650 | Msa0750250 | 0.804398 | 2.202052e-49 | -8.615850e-47 |
| Msa0245650 | Msa0762970 | 0.801515 | 8.683724e-49 | -8.615850e-47 |
| Msa0245650 | Msa0763890 | 0.805595 | 1.237543e-49 | -8.615850e-47 |
| Msa0245650 | Msa0763920 | 0.803585 | 3.249439e-49 | -8.615850e-47 |
| Msa0245650 | Msa0769980 | 0.802954 | 4.390982e-49 | -8.615850e-47 |
| Msa0245650 | Msa0786270 | 0.809986 | 1.442411e-50 | -8.615850e-47 |
| Msa0245650 | Msa0794970 | 0.805119 | 1.556982e-49 | -8.615850e-47 |
| Msa0245650 | Msa0808080 | 0.817206 | 3.718923e-52 | -8.615850e-47 |
| Msa0245650 | Msa0817460 | 0.807024 | 6.184903e-50 | -8.615850e-47 |
| Msa0245650 | Msa0831100 | 0.806116 | 9.616067e-50 | -8.615850e-47 |
| Msa0245650 | Msa0832340 | 0.800696 | 1.277116e-48 | -8.615850e-47 |
| Msa0245650 | Msa0849030 | 0.805497 | 1.297488e-49 | -8.615850e-47 |
| Msa0245650 | Msa0861930 | 0.807500 | 4.903676e-50 | -8.615850e-47 |
| Msa0245650 | Msa0892640 | 0.825987 | 3.472803e-54 | -8.615850e-47 |
| Msa0245650 | Msa0903780 | 0.829829 | 4.134536e-55 | -8.615850e-47 |
| Msa0245650 | Msa0918390 | 0.800663 | 1.296595e-48 | -8.615850e-47 |
| Msa0245650 | Msa0934140 | 0.826720 | 2.323526e-54 | -8.615850e-47 |
| Msa0245650 | Msa0944660 | 0.806398 | 8.388809e-50 | -8.615850e-47 |
| Msa0245650 | Msa0958000 | 0.802058 | 6.717747e-49 | -8.615850e-47 |
| Msa0245650 | Msa0970530 | 0.803402 | 3.546111e-49 | -8.615850e-47 |
| Msa0245650 | Msa0970990 | 0.826974 | 2.020618e-54 | -8.615850e-47 |
| Msa0245650 | Msa0974070 | 0.808451 | 3.077364e-50 | -8.615850e-47 |
| Msa0245650 | Msa0987370 | 0.809693 | 1.667601e-50 | -8.615850e-47 |
| Msa0245650 | Msa1009660 | 0.815123 | 1.086357e-51 | -8.615850e-47 |
| Msa0245650 | Msa1009750 | 0.825697 | 4.069286e-54 | -8.615850e-47 |
| Msa0245650 | Msa1027360 | 0.817060 | 4.010327e-52 | -8.615850e-47 |
| Msa0245650 | Msa1029070 | 0.832108 | 1.140835e-55 | -8.615850e-47 |
| Msa0245650 | Msa1034500 | 0.818878 | 1.557618e-52 | -8.615850e-47 |
| Msa0245650 | Msa1036610 | 0.814657 | 1.377989e-51 | -8.615850e-47 |
| Msa0245650 | Msa1048160 | 0.812429 | 4.259074e-51 | -8.615850e-47 |
| Msa0245650 | Msa1051330 | 0.815709 | 8.044266e-52 | -8.615850e-47 |
| Msa0245650 | Msa1063420 | 0.800591 | 1.341109e-48 | -8.615850e-47 |
| Msa0245650 | Msa1068870 | 0.834505 | 2.883020e-56 | -8.615850e-47 |
| Msa0245650 | Msa1075540 | 0.801207 | 1.003780e-48 | -8.615850e-47 |
| Msa0245650 | Msa1078420 | 0.820242 | 7.606453e-53 | -8.615850e-47 |
| Msa0245650 | Msa1079230 | 0.804920 | 1.713847e-49 | -8.615850e-47 |
| Msa0245650 | Msa1081930 | 0.809484 | 1.849715e-50 | -8.615850e-47 |
| Msa0245650 | Msa1089450 | 0.806039 | 9.981616e-50 | -8.615850e-47 |
| Msa0245650 | Msa1097820 | 0.818440 | 1.958128e-52 | -8.615850e-47 |
| Msa0245650 | Msa1123380 | 0.811966 | 5.373662e-51 | -8.615850e-47 |
| Msa0245650 | Msa1126830 | 0.804348 | 2.255904e-49 | -8.615850e-47 |
| Msa0245650 | Msa1127590 | 0.827970 | 1.165447e-54 | -8.615850e-47 |
| Msa0245650 | Msa1128600 | 0.819927 | 8.981274e-53 | -8.615850e-47 |
| Msa0245650 | Msa1135470 | 0.806150 | 9.458520e-50 | -8.615850e-47 |
| Msa0245650 | Msa1137570 | 0.833699 | 4.588869e-56 | -8.615850e-47 |
| Msa0245650 | Msa1156160 | 0.832693 | 8.174275e-56 | -8.615850e-47 |
| Msa0245650 | Msa1169530 | 0.815734 | 7.943977e-52 | -8.615850e-47 |
| Msa0245650 | Msa1169550 | 0.827293 | 1.694989e-54 | -8.615850e-47 |
| Msa0245650 | Msa1173300 | 0.801144 | 1.034408e-48 | -8.615850e-47 |
| Msa0245650 | Msa1193290 | 0.812674 | 3.764855e-51 | -8.615850e-47 |
| Msa0245650 | Msa1199570 | 0.816368 | 5.731682e-52 | -8.615850e-47 |
| Msa0245650 | Msa1208880 | 0.814889 | 1.224056e-51 | -8.615850e-47 |
| Msa0245650 | Msa1212950 | 0.814297 | 1.655204e-51 | -8.615850e-47 |
| Msa0245650 | Msa1216260 | 0.802214 | 6.238452e-49 | -8.615850e-47 |
| Msa0245650 | Msa1226270 | 0.803099 | 4.097511e-49 | -8.615850e-47 |
| Msa0245650 | Msa1231820 | 0.808265 | 3.370981e-50 | -8.615850e-47 |
| Msa0245650 | Msa1232740 | 0.827259 | 1.726445e-54 | -8.615850e-47 |
| Msa0245650 | Msa1245930 | 0.815604 | 8.492584e-52 | -8.615850e-47 |
| Msa0245650 | Msa1253020 | 0.809044 | 2.298527e-50 | -8.615850e-47 |
| Msa0245650 | Msa1254730 | 0.812429 | 4.258526e-51 | -8.615850e-47 |
| Msa0245650 | Msa1259060 | 0.815583 | 8.580992e-52 | -8.615850e-47 |
| Msa0245650 | Msa1262890 | 0.809656 | 1.699147e-50 | -8.615850e-47 |
| Msa0245650 | Msa1265590 | 0.822003 | 2.987860e-53 | -8.615850e-47 |
| Msa0245650 | Msa1277080 | 0.803674 | 3.115131e-49 | -8.615850e-47 |
| Msa0245650 | Msa1277660 | 0.802024 | 6.827050e-49 | -8.615850e-47 |
| Msa0245650 | Msa1286800 | 0.807319 | 5.355775e-50 | -8.615850e-47 |
| Msa0245650 | Msa1294820 | 0.806885 | 6.620364e-50 | -8.615850e-47 |
| Msa0245650 | Msa1299950 | 0.813241 | 2.828473e-51 | -8.615850e-47 |
| Msa0245650 | Msa1307600 | 0.802211 | 6.246352e-49 | -8.615850e-47 |
| Msa0245650 | Msa1313320 | 0.830966 | 2.180531e-55 | -8.615850e-47 |
| Msa0245650 | Msa1317950 | 0.801710 | 7.917044e-49 | -8.615850e-47 |
| Msa0245650 | Msa1317960 | 0.808487 | 3.022767e-50 | -8.615850e-47 |
| Msa0245650 | Msa1328640 | 0.826664 | 2.396477e-54 | -8.615850e-47 |
| Msa0245650 | Msa1328710 | 0.815395 | 9.449215e-52 | -8.615850e-47 |
| Msa0245650 | Msa1332590 | 0.829255 | 5.700663e-55 | -8.615850e-47 |
| Msa0245650 | Msa1335160 | 0.802718 | 4.911688e-49 | -8.615850e-47 |
| Msa0245650 | Msa1342630 | 0.814982 | 1.167279e-51 | -8.615850e-47 |
| Msa0245650 | Msa1349520 | 0.806180 | 9.320621e-50 | -8.615850e-47 |
| Msa0245650 | Msa1351540 | 0.816792 | 4.606219e-52 | -8.615850e-47 |
| Msa0245650 | Msa1353470 | 0.818770 | 1.648473e-52 | -8.615850e-47 |
| Msa0245650 | Msa1357890 | 0.819619 | 1.056315e-52 | -8.615850e-47 |
| Msa0245650 | Msa1360980 | 0.811499 | 6.792113e-51 | -8.615850e-47 |
| Msa0245650 | Msa1369690 | 0.805163 | 1.524183e-49 | -8.615850e-47 |
| Msa0245650 | Msa1370070 | -0.810082 | 1.375391e-50 | -8.615850e-47 |
| Msa0245650 | Msa1373100 | 0.806439 | 8.220607e-50 | -8.615850e-47 |
| Msa0245650 | Msa1374060 | 0.824404 | 8.222019e-54 | -8.615850e-47 |
| Msa0245650 | Msa1381350 | 0.818522 | 1.876098e-52 | -8.615850e-47 |
| Msa0245650 | Msa1382560 | 0.835296 | 1.822046e-56 | -8.615850e-47 |
| Msa0245650 | Msa1390700 | 0.806937 | 6.452288e-50 | -8.615850e-47 |
| Msa0245650 | Msa1392910 | 0.809854 | 1.540523e-50 | -8.615850e-47 |
| Msa0245650 | Msa1398090 | 0.825560 | 4.385827e-54 | -8.615850e-47 |
| Msa0245650 | Msa1400580 | 0.809399 | 1.928642e-50 | -8.615850e-47 |
| Msa0245650 | Msa1411950 | 0.813963 | 1.961944e-51 | -8.615850e-47 |
| Msa0245650 | Msa1416370 | 0.818797 | 1.624723e-52 | -8.615850e-47 |
| Msa0245650 | Msa1418240 | 0.820027 | 8.521664e-53 | -8.615850e-47 |
| Msa0245650 | Msa1419870 | 0.811816 | 5.792671e-51 | -8.615850e-47 |
| Msa0245650 | Msa1422950 | 0.806624 | 7.513851e-50 | -8.615850e-47 |
| Msa0245650 | Msa1432130 | 0.803354 | 3.628187e-49 | -8.615850e-47 |
| Msa0245650 | Msa1433390 | 0.801620 | 8.263592e-49 | -8.615850e-47 |
| Msa0245650 | Msa1440310 | 0.807242 | 5.561897e-50 | -8.615850e-47 |
| Msa0245650 | Msa1443300 | 0.815229 | 1.029054e-51 | -8.615850e-47 |
| Msa0245650 | Msa1447180 | 0.807821 | 4.190430e-50 | -8.615850e-47 |
| Msa0245650 | Msa1450720 | 0.820732 | 5.870734e-53 | -8.615850e-47 |
| Msa0245650 | Msa1451160 | 0.806904 | 6.558651e-50 | -8.615850e-47 |
| Msa0245650 | Msa1454680 | 0.806382 | 8.450719e-50 | -8.615850e-47 |
| Msa0245650 | Msa1461540 | 0.801206 | 1.004456e-48 | -8.615850e-47 |
| Msa0245650 | Msa1466540 | 0.804340 | 2.264498e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245650 | MtrunA17_Chr2g0299701 | 91.943 | 422 | 7 | 1 | 1 | 395 | 1 | 422 | 0.0 | 799 |
| Msa0245650 | MtrunA17_Chr4g0039421 | 74.463 | 419 | 76 | 2 | 4 | 395 | 47 | 461 | 0.0 | 653 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0245650 | AT5G57020.1 | 76.627 | 415 | 70 | 1 | 8 | 395 | 20 | 434 | 0.0 | 667 |
Find 95 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTACTACTTGTACAATTAT+AGG | 0.187773 | 2_2:+25463951 | Msa0245650:CDS |
| TAACAAAACAACACAAATTC+TGG | 0.214433 | 2_2:+25462747 | Msa0245650:CDS |
| CTACTACTTGTACAATTATA+GGG | 0.243214 | 2_2:+25463952 | Msa0245650:CDS |
| GAGGTTGCTTAGGGGTTATT+TGG | 0.244842 | 2_2:+25463574 | Msa0245650:CDS |
| CGACGGTTACGGAAGGGTTT+AGG | 0.250570 | 2_2:+25463519 | Msa0245650:CDS |
| TACGGAAGGGTTTAGGAAAA+TGG | 0.258903 | 2_2:+25463526 | Msa0245650:CDS |
| GGGTTCATTTGGAGAATATT+TGG | 0.271460 | 2_2:+25463333 | Msa0245650:CDS |
| ACATGGGCTTTGTGTGTTCC+TGG | 0.271939 | 2_2:+25463116 | Msa0245650:CDS |
| ACATTGCCTAGTTCTATTCT+TGG | 0.273116 | 2_2:+25463731 | Msa0245650:CDS |
| GCTTGCACCGGTTATGATTA+AGG | 0.275109 | 2_2:+25463298 | Msa0245650:CDS |
| CTGGGATACCGGCGAGGATT+AGG | 0.277817 | 2_2:+25463204 | Msa0245650:CDS |
| GGCGAAAGATTCGAAGAAAT+TGG | 0.291934 | 2_2:+25463169 | Msa0245650:CDS |
| GACTTGGCATATTGGTGTTC+GGG | 0.312724 | 2_2:+25463148 | Msa0245650:CDS |
| GGTTACTAGGAGGGTTCATT+TGG | 0.331531 | 2_2:+25463322 | Msa0245650:CDS |
| CTGCGGTCACGAGGTTGCTT+AGG | 0.332812 | 2_2:+25463564 | Msa0245650:CDS |
| TTTCTTAAAGAGCTCAAGTT+TGG | 0.336531 | 2_2:+25463908 | Msa0245650:CDS |
| TGCGGTCACGAGGTTGCTTA+GGG | 0.347812 | 2_2:+25463565 | Msa0245650:CDS |
| GTTTAGGTTTAATTACTCTA+AGG | 0.349444 | 2_2:+25463085 | Msa0245650:CDS |
| TGAATGGACAACTTGTGATA+TGG | 0.349811 | 2_2:+25462992 | Msa0245650:CDS |
| AGACTTGGCATATTGGTGTT+CGG | 0.351910 | 2_2:+25463147 | Msa0245650:CDS |
| TATTTGGCAAGCGGCATATA+CGG | 0.372315 | 2_2:+25463349 | Msa0245650:CDS |
| CCTTCCGTAACCGTCGAATC+AGG | 0.381842 | 2_2:-25463512 | None:intergenic |
| GAGGTTTCTTCTGTTAGATC+TGG | 0.383424 | 2_2:-25462683 | None:intergenic |
| CGAAGAAGCTTATTGATGTT+GGG | 0.396227 | 2_2:+25463432 | Msa0245650:CDS |
| GTTGCCTGATTCGACGGTTA+CGG | 0.397086 | 2_2:+25463508 | Msa0245650:CDS |
| AGGTTGCTTAGGGGTTATTT+GGG | 0.402043 | 2_2:+25463575 | Msa0245650:CDS |
| CCAACATCAATAAGCTTCTT+CGG | 0.404437 | 2_2:-25463431 | None:intergenic |
| CCGAAGAAGCTTATTGATGT+TGG | 0.404989 | 2_2:+25463431 | Msa0245650:CDS |
| ACATCTTTGTATTGACCAAC+AGG | 0.407915 | 2_2:-25462779 | None:intergenic |
| TGGGATACCGGCGAGGATTA+GGG | 0.413697 | 2_2:+25463205 | Msa0245650:CDS |
| GAGGATTAGGGTTAATGATA+AGG | 0.416957 | 2_2:+25463217 | Msa0245650:CDS |
| AGGATGATGAGAATATGTTT+AGG | 0.427335 | 2_2:+25463069 | Msa0245650:CDS |
| GTAACCTCCTTAATCATAAC+CGG | 0.450490 | 2_2:-25463305 | None:intergenic |
| TAATGATAAGGTTGTTAGAA+TGG | 0.450619 | 2_2:+25463229 | Msa0245650:CDS |
| ACATCATCTTCATCGAAATC+AGG | 0.458994 | 2_2:-25463614 | None:intergenic |
| AACAAAACAACACAAATTCT+GGG | 0.465557 | 2_2:+25462748 | Msa0245650:CDS |
| CATGGGCTTTGTGTGTTCCT+GGG | 0.466931 | 2_2:+25463117 | Msa0245650:CDS |
| GCCAAGTTCAGATGGTTTCA+AGG | 0.468825 | 2_2:-25463984 | None:intergenic |
| TTGTTACTGACATTGAATCT+TGG | 0.479599 | 2_2:-25462730 | None:intergenic |
| TGGCAAGCGGCATATACGGC+TGG | 0.484926 | 2_2:+25463353 | Msa0245650:CDS |
| TGTGTGTGCATAAGAGACTT+AGG | 0.485952 | 2_2:+25463267 | Msa0245650:CDS |
| TTATGATTAAGGAGGTTACT+AGG | 0.486966 | 2_2:+25463309 | Msa0245650:CDS |
| GCCTTGAAACCATCTGAACT+TGG | 0.488519 | 2_2:+25463983 | Msa0245650:CDS |
| GGCAAGCGGCATATACGGCT+GGG | 0.490447 | 2_2:+25463354 | Msa0245650:CDS |
| GGATGTTGTGGATAGTTACT+TGG | 0.502857 | 2_2:+25463661 | Msa0245650:CDS |
| CGGTTGCTACTTGTCAGTAT+TGG | 0.504031 | 2_2:+25463393 | Msa0245650:CDS |
| TCTAACAGAAGAAACCTCAT+TGG | 0.506590 | 2_2:+25462688 | Msa0245650:CDS |
| CAATACTGACAAGTAGCAAC+CGG | 0.508494 | 2_2:-25463392 | None:intergenic |
| CTCAAGTTTGGACCTGGAGA+TGG | 0.512822 | 2_2:+25463920 | Msa0245650:CDS |
| ATCTTCCAGATAAATATGAA+TGG | 0.516252 | 2_2:+25462976 | Msa0245650:intron |
| TGCTTATTCTTATTATAATG+TGG | 0.519646 | 2_2:+25463781 | Msa0245650:CDS |
| TAGTGAAGCTGTCCATCTCC+AGG | 0.536498 | 2_2:-25463932 | None:intergenic |
| CCTGATTCGACGGTTACGGA+AGG | 0.537314 | 2_2:+25463512 | Msa0245650:CDS |
| AGCACAAGGCCAAGTTCAGA+TGG | 0.537982 | 2_2:-25463992 | None:intergenic |
| TTATAAGTTGCCTGATTCGA+CGG | 0.543667 | 2_2:+25463502 | Msa0245650:CDS |
| TGGGGTTGTGCTACCGACTC+CGG | 0.545234 | 2_2:+25463373 | Msa0245650:CDS |
| GAATGGACAACTTGTGATAT+GGG | 0.548168 | 2_2:+25462993 | Msa0245650:CDS |
| GATTAAGGAGGTTACTAGGA+GGG | 0.550672 | 2_2:+25463313 | Msa0245650:CDS |
| CTACTTGTCAGTATTGGCAT+AGG | 0.554525 | 2_2:+25463399 | Msa0245650:CDS |
| CTGATTCGACGGTTACGGAA+GGG | 0.563808 | 2_2:+25463513 | Msa0245650:CDS |
| GCAAGCGGCATATACGGCTG+GGG | 0.581195 | 2_2:+25463355 | Msa0245650:CDS |
| GCTTCCACATGAGGATGTTG+TGG | 0.582029 | 2_2:+25463649 | Msa0245650:CDS |
| TAGGTCGAAGAGGCTTGCAC+CGG | 0.584060 | 2_2:+25463286 | Msa0245650:CDS |
| TGTGGTTACTAAAACTCCGT+TGG | 0.584486 | 2_2:+25463799 | Msa0245650:CDS |
| AAAGAGCTCAAGTTTGGACC+TGG | 0.586615 | 2_2:+25463914 | Msa0245650:CDS |
| GTTTAGGAAAATGGAGCTGA+GGG | 0.589117 | 2_2:+25463535 | Msa0245650:CDS |
| ACGAACAATTGTTTCCAATG+AGG | 0.590265 | 2_2:-25462702 | None:intergenic |
| ACTGATTGTGGCGAAGCAGA+AGG | 0.590436 | 2_2:+25463841 | Msa0245650:CDS |
| CTAAGCAACCTCGTGACCGC+AGG | 0.591924 | 2_2:-25463563 | None:intergenic |
| TCGTTCATCAACTGAGCCAA+CGG | 0.597133 | 2_2:-25463815 | None:intergenic |
| TTTGGAGAATATTTGGCAAG+CGG | 0.597246 | 2_2:+25463340 | Msa0245650:CDS |
| TTCTGGGAAACACAACCTGT+TGG | 0.598632 | 2_2:+25462764 | Msa0245650:CDS |
| ATGAAGATGATGTTGAGCAT+TGG | 0.598843 | 2_2:+25463624 | Msa0245650:CDS |
| TGATTTCCAAGAATAGAACT+AGG | 0.599510 | 2_2:-25463737 | None:intergenic |
| TCATTAACCCTAATCCTCGC+CGG | 0.602086 | 2_2:-25463212 | None:intergenic |
| GCATTGGCTGCTTCCACATG+AGG | 0.607953 | 2_2:+25463640 | Msa0245650:CDS |
| GGTTTAGGAAAATGGAGCTG+AGG | 0.608661 | 2_2:+25463534 | Msa0245650:CDS |
| GTTGAAGAATAATTATGTTG+AGG | 0.612089 | 2_2:+25463049 | Msa0245650:CDS |
| GTGCGAGGATGACAATGAGT+AGG | 0.621294 | 2_2:+25463468 | Msa0245650:CDS |
| TGCCAAGTCTTAAAATACCC+AGG | 0.623155 | 2_2:-25463134 | None:intergenic |
| TGACAAGTAGCAACCGGAGT+CGG | 0.626237 | 2_2:-25463386 | None:intergenic |
| GGGATGTTCCTGCGGTCACG+AGG | 0.628512 | 2_2:+25463555 | Msa0245650:CDS |
| GATGAACGATGCACTGATTG+TGG | 0.628611 | 2_2:+25463829 | Msa0245650:CDS |
| GCGGTCACGAGGTTGCTTAG+GGG | 0.641576 | 2_2:+25463566 | Msa0245650:CDS |
| TGATTAAGGAGGTTACTAGG+AGG | 0.645667 | 2_2:+25463312 | Msa0245650:CDS |
| CTATCCACAACATCCTCATG+TGG | 0.651247 | 2_2:-25463653 | None:intergenic |
| GTTGGTCAATACAAAGATGT+TGG | 0.654826 | 2_2:+25462782 | Msa0245650:CDS |
| TTATTACTGGGATACCGGCG+AGG | 0.656725 | 2_2:+25463198 | Msa0245650:CDS |
| ATAAGAGACTTAGGTCGAAG+AGG | 0.667868 | 2_2:+25463276 | Msa0245650:CDS |
| GGAGCTGAGGGATGTTCCTG+CGG | 0.669753 | 2_2:+25463547 | Msa0245650:CDS |
| TGCACCGGTTATGATTAAGG+AGG | 0.681831 | 2_2:+25463301 | Msa0245650:CDS |
| TTGTCAAGAAACATGTGATG+AGG | 0.682234 | 2_2:+25463016 | Msa0245650:CDS |
| TCAGAGACTACAAGAGCACA+AGG | 0.684761 | 2_2:-25464006 | None:intergenic |
| TTGGATGTAATGCATAACGA+GGG | 0.690270 | 2_2:+25463884 | Msa0245650:CDS |
| GTTGGATGTAATGCATAACG+AGG | 0.704192 | 2_2:+25463883 | Msa0245650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTTATCTGGAAGATTATA+AGG | - | chr2_2:25462972-25462991 | None:intergenic | 20.0% |
| !! | TGCTTATTCTTATTATAATG+TGG | + | chr2_2:25463781-25463800 | Msa0245650:CDS | 20.0% |
| !! | TATTTATCTGGAAGATTATA+AGG | - | chr2_2:25462972-25462991 | None:intergenic | 20.0% |
| !! | TGCTTATTCTTATTATAATG+TGG | + | chr2_2:25463781-25463800 | Msa0245650:CDS | 20.0% |
| ! | TAACAAAACAACACAAATTC+TGG | + | chr2_2:25462747-25462766 | Msa0245650:CDS | 25.0% |
| ! | AACAAAACAACACAAATTCT+GGG | + | chr2_2:25462748-25462767 | Msa0245650:CDS | 25.0% |
| !! | NNNNGTTTGACTTCTGATAA+GGG | - | chr2_2:25462848-25462867 | None:intergenic | 25.0% |
| !! | NNNNNGTTTGACTTCTGATA+AGG | - | chr2_2:25462849-25462868 | None:intergenic | 25.0% |
| ! | ATCTTCCAGATAAATATGAA+TGG | + | chr2_2:25462976-25462995 | Msa0245650:intron | 25.0% |
| ! | GTTGAAGAATAATTATGTTG+AGG | + | chr2_2:25463049-25463068 | Msa0245650:CDS | 25.0% |
| !! | GTTTAGGTTTAATTACTCTA+AGG | + | chr2_2:25463085-25463104 | Msa0245650:CDS | 25.0% |
| !!! | TATTTTAAGACTTGGCATAT+TGG | + | chr2_2:25463140-25463159 | Msa0245650:CDS | 25.0% |
| !!! | AAATTGGTTGCTTTTATTAC+TGG | + | chr2_2:25463185-25463204 | Msa0245650:CDS | 25.0% |
| !!! | AATTGGTTGCTTTTATTACT+GGG | + | chr2_2:25463186-25463205 | Msa0245650:CDS | 25.0% |
| ! | TAATGATAAGGTTGTTAGAA+TGG | + | chr2_2:25463229-25463248 | Msa0245650:CDS | 25.0% |
| ! | TACAAAAATCAGTAATCTCA+TGG | - | chr2_2:25463703-25463722 | None:intergenic | 25.0% |
| ! | ACTACTACTTGTACAATTAT+AGG | + | chr2_2:25463951-25463970 | Msa0245650:CDS | 25.0% |
| ! | CTACTACTTGTACAATTATA+GGG | + | chr2_2:25463952-25463971 | Msa0245650:CDS | 25.0% |
| ! | TAACAAAACAACACAAATTC+TGG | + | chr2_2:25462747-25462766 | Msa0245650:CDS | 25.0% |
| ! | AACAAAACAACACAAATTCT+GGG | + | chr2_2:25462748-25462767 | Msa0245650:CDS | 25.0% |
| !! | NNNNGTTTGACTTCTGATAA+GGG | - | chr2_2:25462848-25462867 | None:intergenic | 25.0% |
| !! | NNNNNGTTTGACTTCTGATA+AGG | - | chr2_2:25462849-25462868 | None:intergenic | 25.0% |
| ! | ATCTTCCAGATAAATATGAA+TGG | + | chr2_2:25462976-25462995 | Msa0245650:intron | 25.0% |
| ! | GTTGAAGAATAATTATGTTG+AGG | + | chr2_2:25463049-25463068 | Msa0245650:CDS | 25.0% |
| !! | GTTTAGGTTTAATTACTCTA+AGG | + | chr2_2:25463085-25463104 | Msa0245650:CDS | 25.0% |
| !!! | TATTTTAAGACTTGGCATAT+TGG | + | chr2_2:25463140-25463159 | Msa0245650:CDS | 25.0% |
| !!! | AAATTGGTTGCTTTTATTAC+TGG | + | chr2_2:25463185-25463204 | Msa0245650:CDS | 25.0% |
| !!! | AATTGGTTGCTTTTATTACT+GGG | + | chr2_2:25463186-25463205 | Msa0245650:CDS | 25.0% |
| ! | TAATGATAAGGTTGTTAGAA+TGG | + | chr2_2:25463229-25463248 | Msa0245650:CDS | 25.0% |
| ! | TACAAAAATCAGTAATCTCA+TGG | - | chr2_2:25463703-25463722 | None:intergenic | 25.0% |
| ! | ACTACTACTTGTACAATTAT+AGG | + | chr2_2:25463951-25463970 | Msa0245650:CDS | 25.0% |
| ! | CTACTACTTGTACAATTATA+GGG | + | chr2_2:25463952-25463971 | Msa0245650:CDS | 25.0% |
| !!! | TGTTAGATCTGGTTTTGATT+CGG | - | chr2_2:25462675-25462694 | None:intergenic | 30.0% |
| TTGTTACTGACATTGAATCT+TGG | - | chr2_2:25462733-25462752 | None:intergenic | 30.0% | |
| GTTGTCCATTCATATTTATC+TGG | - | chr2_2:25462984-25463003 | None:intergenic | 30.0% | |
| AGGATGATGAGAATATGTTT+AGG | + | chr2_2:25463069-25463088 | Msa0245650:CDS | 30.0% | |
| !! | ACTCTAAGGAGTTTTTAACA+TGG | + | chr2_2:25463099-25463118 | Msa0245650:CDS | 30.0% |
| !! | CTCTAAGGAGTTTTTAACAT+GGG | + | chr2_2:25463100-25463119 | Msa0245650:CDS | 30.0% |
| TTATGATTAAGGAGGTTACT+AGG | + | chr2_2:25463309-25463328 | Msa0245650:CDS | 30.0% | |
| TGATTTCCAAGAATAGAACT+AGG | - | chr2_2:25463740-25463759 | None:intergenic | 30.0% | |
| TTTCTTAAAGAGCTCAAGTT+TGG | + | chr2_2:25463908-25463927 | Msa0245650:CDS | 30.0% | |
| !!! | TGTTAGATCTGGTTTTGATT+CGG | - | chr2_2:25462675-25462694 | None:intergenic | 30.0% |
| TTGTTACTGACATTGAATCT+TGG | - | chr2_2:25462733-25462752 | None:intergenic | 30.0% | |
| GTTGTCCATTCATATTTATC+TGG | - | chr2_2:25462984-25463003 | None:intergenic | 30.0% | |
| AGGATGATGAGAATATGTTT+AGG | + | chr2_2:25463069-25463088 | Msa0245650:CDS | 30.0% | |
| !! | ACTCTAAGGAGTTTTTAACA+TGG | + | chr2_2:25463099-25463118 | Msa0245650:CDS | 30.0% |
| !! | CTCTAAGGAGTTTTTAACAT+GGG | + | chr2_2:25463100-25463119 | Msa0245650:CDS | 30.0% |
| TTATGATTAAGGAGGTTACT+AGG | + | chr2_2:25463309-25463328 | Msa0245650:CDS | 30.0% | |
| TGATTTCCAAGAATAGAACT+AGG | - | chr2_2:25463740-25463759 | None:intergenic | 30.0% | |
| TTTCTTAAAGAGCTCAAGTT+TGG | + | chr2_2:25463908-25463927 | Msa0245650:CDS | 30.0% | |
| TCTAACAGAAGAAACCTCAT+TGG | + | chr2_2:25462688-25462707 | Msa0245650:CDS | 35.0% | |
| ACGAACAATTGTTTCCAATG+AGG | - | chr2_2:25462705-25462724 | None:intergenic | 35.0% | |
| ! | ACATCTTTGTATTGACCAAC+AGG | - | chr2_2:25462782-25462801 | None:intergenic | 35.0% |
| GTTGGTCAATACAAAGATGT+TGG | + | chr2_2:25462782-25462801 | Msa0245650:CDS | 35.0% | |
| ! | TTGACTTCTGATAAGGGTTT+TGG | - | chr2_2:25462842-25462861 | None:intergenic | 35.0% |
| TGAATGGACAACTTGTGATA+TGG | + | chr2_2:25462992-25463011 | Msa0245650:CDS | 35.0% | |
| GAATGGACAACTTGTGATAT+GGG | + | chr2_2:25462993-25463012 | Msa0245650:CDS | 35.0% | |
| TTGTCAAGAAACATGTGATG+AGG | + | chr2_2:25463016-25463035 | Msa0245650:CDS | 35.0% | |
| !!! | TTCCTGGGTATTTTAAGACT+TGG | + | chr2_2:25463132-25463151 | Msa0245650:CDS | 35.0% |
| ! | TGCTTTTATTACTGGGATAC+CGG | + | chr2_2:25463193-25463212 | Msa0245650:CDS | 35.0% |
| GAGGATTAGGGTTAATGATA+AGG | + | chr2_2:25463217-25463236 | Msa0245650:CDS | 35.0% | |
| GTAACCTCCTTAATCATAAC+CGG | - | chr2_2:25463308-25463327 | None:intergenic | 35.0% | |
| GGGTTCATTTGGAGAATATT+TGG | + | chr2_2:25463333-25463352 | Msa0245650:CDS | 35.0% | |
| TTTGGAGAATATTTGGCAAG+CGG | + | chr2_2:25463340-25463359 | Msa0245650:CDS | 35.0% | |
| CCAACATCAATAAGCTTCTT+CGG | - | chr2_2:25463434-25463453 | None:intergenic | 35.0% | |
| CGAAGAAGCTTATTGATGTT+GGG | + | chr2_2:25463432-25463451 | Msa0245650:CDS | 35.0% | |
| ! | TTATTGATGTTGGGTTTTCG+AGG | + | chr2_2:25463441-25463460 | Msa0245650:CDS | 35.0% |
| ! | TTATAAGTTGCCTGATTCGA+CGG | + | chr2_2:25463502-25463521 | Msa0245650:CDS | 35.0% |
| ACATCATCTTCATCGAAATC+AGG | - | chr2_2:25463617-25463636 | None:intergenic | 35.0% | |
| ATGAAGATGATGTTGAGCAT+TGG | + | chr2_2:25463624-25463643 | Msa0245650:CDS | 35.0% | |
| ! | TCAGTAATCTCATGGTTTTC+AGG | - | chr2_2:25463695-25463714 | None:intergenic | 35.0% |
| !! | ACATTGCCTAGTTCTATTCT+TGG | + | chr2_2:25463731-25463750 | Msa0245650:CDS | 35.0% |
| ! | TTTCGATGTTTTCAATGCGT+TGG | + | chr2_2:25463865-25463884 | Msa0245650:CDS | 35.0% |
| TTGGATGTAATGCATAACGA+GGG | + | chr2_2:25463884-25463903 | Msa0245650:CDS | 35.0% | |
| TCTAACAGAAGAAACCTCAT+TGG | + | chr2_2:25462688-25462707 | Msa0245650:CDS | 35.0% | |
| ACGAACAATTGTTTCCAATG+AGG | - | chr2_2:25462705-25462724 | None:intergenic | 35.0% | |
| ! | ACATCTTTGTATTGACCAAC+AGG | - | chr2_2:25462782-25462801 | None:intergenic | 35.0% |
| GTTGGTCAATACAAAGATGT+TGG | + | chr2_2:25462782-25462801 | Msa0245650:CDS | 35.0% | |
| ! | TTGACTTCTGATAAGGGTTT+TGG | - | chr2_2:25462842-25462861 | None:intergenic | 35.0% |
| TGAATGGACAACTTGTGATA+TGG | + | chr2_2:25462992-25463011 | Msa0245650:CDS | 35.0% | |
| GAATGGACAACTTGTGATAT+GGG | + | chr2_2:25462993-25463012 | Msa0245650:CDS | 35.0% | |
| TTGTCAAGAAACATGTGATG+AGG | + | chr2_2:25463016-25463035 | Msa0245650:CDS | 35.0% | |
| !!! | TTCCTGGGTATTTTAAGACT+TGG | + | chr2_2:25463132-25463151 | Msa0245650:CDS | 35.0% |
| ! | TGCTTTTATTACTGGGATAC+CGG | + | chr2_2:25463193-25463212 | Msa0245650:CDS | 35.0% |
| GAGGATTAGGGTTAATGATA+AGG | + | chr2_2:25463217-25463236 | Msa0245650:CDS | 35.0% | |
| GTAACCTCCTTAATCATAAC+CGG | - | chr2_2:25463308-25463327 | None:intergenic | 35.0% | |
| GGGTTCATTTGGAGAATATT+TGG | + | chr2_2:25463333-25463352 | Msa0245650:CDS | 35.0% | |
| TTTGGAGAATATTTGGCAAG+CGG | + | chr2_2:25463340-25463359 | Msa0245650:CDS | 35.0% | |
| CCAACATCAATAAGCTTCTT+CGG | - | chr2_2:25463434-25463453 | None:intergenic | 35.0% | |
| CGAAGAAGCTTATTGATGTT+GGG | + | chr2_2:25463432-25463451 | Msa0245650:CDS | 35.0% | |
| ! | TTATTGATGTTGGGTTTTCG+AGG | + | chr2_2:25463441-25463460 | Msa0245650:CDS | 35.0% |
| ! | TTATAAGTTGCCTGATTCGA+CGG | + | chr2_2:25463502-25463521 | Msa0245650:CDS | 35.0% |
| ACATCATCTTCATCGAAATC+AGG | - | chr2_2:25463617-25463636 | None:intergenic | 35.0% | |
| ATGAAGATGATGTTGAGCAT+TGG | + | chr2_2:25463624-25463643 | Msa0245650:CDS | 35.0% | |
| ! | TCAGTAATCTCATGGTTTTC+AGG | - | chr2_2:25463695-25463714 | None:intergenic | 35.0% |
| !! | ACATTGCCTAGTTCTATTCT+TGG | + | chr2_2:25463731-25463750 | Msa0245650:CDS | 35.0% |
| ! | TTTCGATGTTTTCAATGCGT+TGG | + | chr2_2:25463865-25463884 | Msa0245650:CDS | 35.0% |
| TTGGATGTAATGCATAACGA+GGG | + | chr2_2:25463884-25463903 | Msa0245650:CDS | 35.0% | |
| GAGGTTTCTTCTGTTAGATC+TGG | - | chr2_2:25462686-25462705 | None:intergenic | 40.0% | |
| TTCAATTGGTCCTTCTGGTA+GGG | - | chr2_2:25462816-25462835 | None:intergenic | 40.0% | |
| !! | AAGGGTTTTGGTGGTTCAAT+TGG | - | chr2_2:25462830-25462849 | None:intergenic | 40.0% |
| !! | ACTTCTGATAAGGGTTTTGG+TGG | - | chr2_2:25462839-25462858 | None:intergenic | 40.0% |
| TGCCAAGTCTTAAAATACCC+AGG | - | chr2_2:25463137-25463156 | None:intergenic | 40.0% | |
| ! | AGACTTGGCATATTGGTGTT+CGG | + | chr2_2:25463147-25463166 | Msa0245650:CDS | 40.0% |
| GGCGAAAGATTCGAAGAAAT+TGG | + | chr2_2:25463169-25463188 | Msa0245650:CDS | 40.0% | |
| TGTGTGTGCATAAGAGACTT+AGG | + | chr2_2:25463267-25463286 | Msa0245650:CDS | 40.0% | |
| ATAAGAGACTTAGGTCGAAG+AGG | + | chr2_2:25463276-25463295 | Msa0245650:CDS | 40.0% | |
| TGATTAAGGAGGTTACTAGG+AGG | + | chr2_2:25463312-25463331 | Msa0245650:CDS | 40.0% | |
| GATTAAGGAGGTTACTAGGA+GGG | + | chr2_2:25463313-25463332 | Msa0245650:CDS | 40.0% | |
| TATTTGGCAAGCGGCATATA+CGG | + | chr2_2:25463349-25463368 | Msa0245650:CDS | 40.0% | |
| CAATACTGACAAGTAGCAAC+CGG | - | chr2_2:25463395-25463414 | None:intergenic | 40.0% | |
| !! | CTACTTGTCAGTATTGGCAT+AGG | + | chr2_2:25463399-25463418 | Msa0245650:CDS | 40.0% |
| CCGAAGAAGCTTATTGATGT+TGG | + | chr2_2:25463431-25463450 | Msa0245650:CDS | 40.0% | |
| TACGGAAGGGTTTAGGAAAA+TGG | + | chr2_2:25463526-25463545 | Msa0245650:CDS | 40.0% | |
| GTTTAGGAAAATGGAGCTGA+GGG | + | chr2_2:25463535-25463554 | Msa0245650:CDS | 40.0% | |
| AGGTTGCTTAGGGGTTATTT+GGG | + | chr2_2:25463575-25463594 | Msa0245650:CDS | 40.0% | |
| GGATGTTGTGGATAGTTACT+TGG | + | chr2_2:25463661-25463680 | Msa0245650:CDS | 40.0% | |
| TGTGGTTACTAAAACTCCGT+TGG | + | chr2_2:25463799-25463818 | Msa0245650:CDS | 40.0% | |
| GTTGGATGTAATGCATAACG+AGG | + | chr2_2:25463883-25463902 | Msa0245650:CDS | 40.0% | |
| GAGGTTTCTTCTGTTAGATC+TGG | - | chr2_2:25462686-25462705 | None:intergenic | 40.0% | |
| TTCAATTGGTCCTTCTGGTA+GGG | - | chr2_2:25462816-25462835 | None:intergenic | 40.0% | |
| !! | AAGGGTTTTGGTGGTTCAAT+TGG | - | chr2_2:25462830-25462849 | None:intergenic | 40.0% |
| !! | ACTTCTGATAAGGGTTTTGG+TGG | - | chr2_2:25462839-25462858 | None:intergenic | 40.0% |
| TGCCAAGTCTTAAAATACCC+AGG | - | chr2_2:25463137-25463156 | None:intergenic | 40.0% | |
| ! | AGACTTGGCATATTGGTGTT+CGG | + | chr2_2:25463147-25463166 | Msa0245650:CDS | 40.0% |
| GGCGAAAGATTCGAAGAAAT+TGG | + | chr2_2:25463169-25463188 | Msa0245650:CDS | 40.0% | |
| TGTGTGTGCATAAGAGACTT+AGG | + | chr2_2:25463267-25463286 | Msa0245650:CDS | 40.0% | |
| ATAAGAGACTTAGGTCGAAG+AGG | + | chr2_2:25463276-25463295 | Msa0245650:CDS | 40.0% | |
| TGATTAAGGAGGTTACTAGG+AGG | + | chr2_2:25463312-25463331 | Msa0245650:CDS | 40.0% | |
| GATTAAGGAGGTTACTAGGA+GGG | + | chr2_2:25463313-25463332 | Msa0245650:CDS | 40.0% | |
| TATTTGGCAAGCGGCATATA+CGG | + | chr2_2:25463349-25463368 | Msa0245650:CDS | 40.0% | |
| CAATACTGACAAGTAGCAAC+CGG | - | chr2_2:25463395-25463414 | None:intergenic | 40.0% | |
| !! | CTACTTGTCAGTATTGGCAT+AGG | + | chr2_2:25463399-25463418 | Msa0245650:CDS | 40.0% |
| CCGAAGAAGCTTATTGATGT+TGG | + | chr2_2:25463431-25463450 | Msa0245650:CDS | 40.0% | |
| TACGGAAGGGTTTAGGAAAA+TGG | + | chr2_2:25463526-25463545 | Msa0245650:CDS | 40.0% | |
| GTTTAGGAAAATGGAGCTGA+GGG | + | chr2_2:25463535-25463554 | Msa0245650:CDS | 40.0% | |
| AGGTTGCTTAGGGGTTATTT+GGG | + | chr2_2:25463575-25463594 | Msa0245650:CDS | 40.0% | |
| GGATGTTGTGGATAGTTACT+TGG | + | chr2_2:25463661-25463680 | Msa0245650:CDS | 40.0% | |
| TGTGGTTACTAAAACTCCGT+TGG | + | chr2_2:25463799-25463818 | Msa0245650:CDS | 40.0% | |
| GTTGGATGTAATGCATAACG+AGG | + | chr2_2:25463883-25463902 | Msa0245650:CDS | 40.0% | |
| ! | TTCTGGGAAACACAACCTGT+TGG | + | chr2_2:25462764-25462783 | Msa0245650:CDS | 45.0% |
| GTTCAATTGGTCCTTCTGGT+AGG | - | chr2_2:25462817-25462836 | None:intergenic | 45.0% | |
| ! | GACTTGGCATATTGGTGTTC+GGG | + | chr2_2:25463148-25463167 | Msa0245650:CDS | 45.0% |
| TCATTAACCCTAATCCTCGC+CGG | - | chr2_2:25463215-25463234 | None:intergenic | 45.0% | |
| !! | GCTTGCACCGGTTATGATTA+AGG | + | chr2_2:25463298-25463317 | Msa0245650:CDS | 45.0% |
| !! | TGCACCGGTTATGATTAAGG+AGG | + | chr2_2:25463301-25463320 | Msa0245650:CDS | 45.0% |
| GGTTACTAGGAGGGTTCATT+TGG | + | chr2_2:25463322-25463341 | Msa0245650:CDS | 45.0% | |
| ! | CGGTTGCTACTTGTCAGTAT+TGG | + | chr2_2:25463393-25463412 | Msa0245650:CDS | 45.0% |
| GGTTTAGGAAAATGGAGCTG+AGG | + | chr2_2:25463534-25463553 | Msa0245650:CDS | 45.0% | |
| GAGGTTGCTTAGGGGTTATT+TGG | + | chr2_2:25463574-25463593 | Msa0245650:CDS | 45.0% | |
| CTATCCACAACATCCTCATG+TGG | - | chr2_2:25463656-25463675 | None:intergenic | 45.0% | |
| TCGTTCATCAACTGAGCCAA+CGG | - | chr2_2:25463818-25463837 | None:intergenic | 45.0% | |
| !! | GATGAACGATGCACTGATTG+TGG | + | chr2_2:25463829-25463848 | Msa0245650:CDS | 45.0% |
| AAAGAGCTCAAGTTTGGACC+TGG | + | chr2_2:25463914-25463933 | Msa0245650:CDS | 45.0% | |
| GCCTTGAAACCATCTGAACT+TGG | + | chr2_2:25463983-25464002 | Msa0245650:CDS | 45.0% | |
| GCCAAGTTCAGATGGTTTCA+AGG | - | chr2_2:25463987-25464006 | None:intergenic | 45.0% | |
| ! | TTCTGGGAAACACAACCTGT+TGG | + | chr2_2:25462764-25462783 | Msa0245650:CDS | 45.0% |
| GTTCAATTGGTCCTTCTGGT+AGG | - | chr2_2:25462817-25462836 | None:intergenic | 45.0% | |
| ! | GACTTGGCATATTGGTGTTC+GGG | + | chr2_2:25463148-25463167 | Msa0245650:CDS | 45.0% |
| TCATTAACCCTAATCCTCGC+CGG | - | chr2_2:25463215-25463234 | None:intergenic | 45.0% | |
| !! | GCTTGCACCGGTTATGATTA+AGG | + | chr2_2:25463298-25463317 | Msa0245650:CDS | 45.0% |
| !! | TGCACCGGTTATGATTAAGG+AGG | + | chr2_2:25463301-25463320 | Msa0245650:CDS | 45.0% |
| GGTTACTAGGAGGGTTCATT+TGG | + | chr2_2:25463322-25463341 | Msa0245650:CDS | 45.0% | |
| ! | CGGTTGCTACTTGTCAGTAT+TGG | + | chr2_2:25463393-25463412 | Msa0245650:CDS | 45.0% |
| GGTTTAGGAAAATGGAGCTG+AGG | + | chr2_2:25463534-25463553 | Msa0245650:CDS | 45.0% | |
| GAGGTTGCTTAGGGGTTATT+TGG | + | chr2_2:25463574-25463593 | Msa0245650:CDS | 45.0% | |
| CTATCCACAACATCCTCATG+TGG | - | chr2_2:25463656-25463675 | None:intergenic | 45.0% | |
| TCGTTCATCAACTGAGCCAA+CGG | - | chr2_2:25463818-25463837 | None:intergenic | 45.0% | |
| !! | GATGAACGATGCACTGATTG+TGG | + | chr2_2:25463829-25463848 | Msa0245650:CDS | 45.0% |
| AAAGAGCTCAAGTTTGGACC+TGG | + | chr2_2:25463914-25463933 | Msa0245650:CDS | 45.0% | |
| GCCTTGAAACCATCTGAACT+TGG | + | chr2_2:25463983-25464002 | Msa0245650:CDS | 45.0% | |
| GCCAAGTTCAGATGGTTTCA+AGG | - | chr2_2:25463987-25464006 | None:intergenic | 45.0% | |
| GGTGGTTCAATTGGTCCTTC+TGG | - | chr2_2:25462821-25462840 | None:intergenic | 50.0% | |
| ! | ACATGGGCTTTGTGTGTTCC+TGG | + | chr2_2:25463116-25463135 | Msa0245650:CDS | 50.0% |
| ! | CATGGGCTTTGTGTGTTCCT+GGG | + | chr2_2:25463117-25463136 | Msa0245650:CDS | 50.0% |
| TTATTACTGGGATACCGGCG+AGG | + | chr2_2:25463198-25463217 | Msa0245650:CDS | 50.0% | |
| TGACAAGTAGCAACCGGAGT+CGG | - | chr2_2:25463389-25463408 | None:intergenic | 50.0% | |
| !! | GATGTTGGGTTTTCGAGGCT+TGG | + | chr2_2:25463446-25463465 | Msa0245650:CDS | 50.0% |
| GTGCGAGGATGACAATGAGT+AGG | + | chr2_2:25463468-25463487 | Msa0245650:CDS | 50.0% | |
| ! | GTTGCCTGATTCGACGGTTA+CGG | + | chr2_2:25463508-25463527 | Msa0245650:CDS | 50.0% |
| ! | CTGATTCGACGGTTACGGAA+GGG | + | chr2_2:25463513-25463532 | Msa0245650:CDS | 50.0% |
| GCTTCCACATGAGGATGTTG+TGG | + | chr2_2:25463649-25463668 | Msa0245650:CDS | 50.0% | |
| ACTGATTGTGGCGAAGCAGA+AGG | + | chr2_2:25463841-25463860 | Msa0245650:CDS | 50.0% | |
| CTCAAGTTTGGACCTGGAGA+TGG | + | chr2_2:25463920-25463939 | Msa0245650:CDS | 50.0% | |
| TAGTGAAGCTGTCCATCTCC+AGG | - | chr2_2:25463935-25463954 | None:intergenic | 50.0% | |
| AGCACAAGGCCAAGTTCAGA+TGG | - | chr2_2:25463995-25464014 | None:intergenic | 50.0% | |
| GGTGGTTCAATTGGTCCTTC+TGG | - | chr2_2:25462821-25462840 | None:intergenic | 50.0% | |
| ! | ACATGGGCTTTGTGTGTTCC+TGG | + | chr2_2:25463116-25463135 | Msa0245650:CDS | 50.0% |
| ! | CATGGGCTTTGTGTGTTCCT+GGG | + | chr2_2:25463117-25463136 | Msa0245650:CDS | 50.0% |
| TTATTACTGGGATACCGGCG+AGG | + | chr2_2:25463198-25463217 | Msa0245650:CDS | 50.0% | |
| TGACAAGTAGCAACCGGAGT+CGG | - | chr2_2:25463389-25463408 | None:intergenic | 50.0% | |
| !! | GATGTTGGGTTTTCGAGGCT+TGG | + | chr2_2:25463446-25463465 | Msa0245650:CDS | 50.0% |
| GTGCGAGGATGACAATGAGT+AGG | + | chr2_2:25463468-25463487 | Msa0245650:CDS | 50.0% | |
| ! | GTTGCCTGATTCGACGGTTA+CGG | + | chr2_2:25463508-25463527 | Msa0245650:CDS | 50.0% |
| ! | CTGATTCGACGGTTACGGAA+GGG | + | chr2_2:25463513-25463532 | Msa0245650:CDS | 50.0% |
| GCTTCCACATGAGGATGTTG+TGG | + | chr2_2:25463649-25463668 | Msa0245650:CDS | 50.0% | |
| ACTGATTGTGGCGAAGCAGA+AGG | + | chr2_2:25463841-25463860 | Msa0245650:CDS | 50.0% | |
| CTCAAGTTTGGACCTGGAGA+TGG | + | chr2_2:25463920-25463939 | Msa0245650:CDS | 50.0% | |
| TAGTGAAGCTGTCCATCTCC+AGG | - | chr2_2:25463935-25463954 | None:intergenic | 50.0% | |
| AGCACAAGGCCAAGTTCAGA+TGG | - | chr2_2:25463995-25464014 | None:intergenic | 50.0% | |
| GGTGACACAACCCTACCAGA+AGG | + | chr2_2:25462803-25462822 | Msa0245650:intron | 55.0% | |
| TGGGATACCGGCGAGGATTA+GGG | + | chr2_2:25463205-25463224 | Msa0245650:CDS | 55.0% | |
| TAGGTCGAAGAGGCTTGCAC+CGG | + | chr2_2:25463286-25463305 | Msa0245650:CDS | 55.0% | |
| CCTTCCGTAACCGTCGAATC+AGG | - | chr2_2:25463515-25463534 | None:intergenic | 55.0% | |
| ! | CCTGATTCGACGGTTACGGA+AGG | + | chr2_2:25463512-25463531 | Msa0245650:CDS | 55.0% |
| CGACGGTTACGGAAGGGTTT+AGG | + | chr2_2:25463519-25463538 | Msa0245650:CDS | 55.0% | |
| TGCGGTCACGAGGTTGCTTA+GGG | + | chr2_2:25463565-25463584 | Msa0245650:CDS | 55.0% | |
| !! | GCATTGGCTGCTTCCACATG+AGG | + | chr2_2:25463640-25463659 | Msa0245650:CDS | 55.0% |
| GGTGACACAACCCTACCAGA+AGG | + | chr2_2:25462803-25462822 | Msa0245650:intron | 55.0% | |
| TGGGATACCGGCGAGGATTA+GGG | + | chr2_2:25463205-25463224 | Msa0245650:CDS | 55.0% | |
| TAGGTCGAAGAGGCTTGCAC+CGG | + | chr2_2:25463286-25463305 | Msa0245650:CDS | 55.0% | |
| CCTTCCGTAACCGTCGAATC+AGG | - | chr2_2:25463515-25463534 | None:intergenic | 55.0% | |
| ! | CCTGATTCGACGGTTACGGA+AGG | + | chr2_2:25463512-25463531 | Msa0245650:CDS | 55.0% |
| CGACGGTTACGGAAGGGTTT+AGG | + | chr2_2:25463519-25463538 | Msa0245650:CDS | 55.0% | |
| TGCGGTCACGAGGTTGCTTA+GGG | + | chr2_2:25463565-25463584 | Msa0245650:CDS | 55.0% | |
| !! | GCATTGGCTGCTTCCACATG+AGG | + | chr2_2:25463640-25463659 | Msa0245650:CDS | 55.0% |
| CTGGGATACCGGCGAGGATT+AGG | + | chr2_2:25463204-25463223 | Msa0245650:CDS | 60.0% | |
| TGGCAAGCGGCATATACGGC+TGG | + | chr2_2:25463353-25463372 | Msa0245650:CDS | 60.0% | |
| GGCAAGCGGCATATACGGCT+GGG | + | chr2_2:25463354-25463373 | Msa0245650:CDS | 60.0% | |
| GCAAGCGGCATATACGGCTG+GGG | + | chr2_2:25463355-25463374 | Msa0245650:CDS | 60.0% | |
| !! | TGGGGTTGTGCTACCGACTC+CGG | + | chr2_2:25463373-25463392 | Msa0245650:CDS | 60.0% |
| !!! | GGTTTTCGAGGCTTGGTGCG+AGG | + | chr2_2:25463453-25463472 | Msa0245650:CDS | 60.0% |
| GGAGCTGAGGGATGTTCCTG+CGG | + | chr2_2:25463547-25463566 | Msa0245650:CDS | 60.0% | |
| CTAAGCAACCTCGTGACCGC+AGG | - | chr2_2:25463566-25463585 | None:intergenic | 60.0% | |
| CTGCGGTCACGAGGTTGCTT+AGG | + | chr2_2:25463564-25463583 | Msa0245650:CDS | 60.0% | |
| GCGGTCACGAGGTTGCTTAG+GGG | + | chr2_2:25463566-25463585 | Msa0245650:CDS | 60.0% | |
| CTGGGATACCGGCGAGGATT+AGG | + | chr2_2:25463204-25463223 | Msa0245650:CDS | 60.0% | |
| TGGCAAGCGGCATATACGGC+TGG | + | chr2_2:25463353-25463372 | Msa0245650:CDS | 60.0% | |
| GGCAAGCGGCATATACGGCT+GGG | + | chr2_2:25463354-25463373 | Msa0245650:CDS | 60.0% | |
| GCAAGCGGCATATACGGCTG+GGG | + | chr2_2:25463355-25463374 | Msa0245650:CDS | 60.0% | |
| !! | TGGGGTTGTGCTACCGACTC+CGG | + | chr2_2:25463373-25463392 | Msa0245650:CDS | 60.0% |
| !!! | GGTTTTCGAGGCTTGGTGCG+AGG | + | chr2_2:25463453-25463472 | Msa0245650:CDS | 60.0% |
| GGAGCTGAGGGATGTTCCTG+CGG | + | chr2_2:25463547-25463566 | Msa0245650:CDS | 60.0% | |
| CTAAGCAACCTCGTGACCGC+AGG | - | chr2_2:25463566-25463585 | None:intergenic | 60.0% | |
| CTGCGGTCACGAGGTTGCTT+AGG | + | chr2_2:25463564-25463583 | Msa0245650:CDS | 60.0% | |
| GCGGTCACGAGGTTGCTTAG+GGG | + | chr2_2:25463566-25463585 | Msa0245650:CDS | 60.0% | |
| GGGATGTTCCTGCGGTCACG+AGG | + | chr2_2:25463555-25463574 | Msa0245650:CDS | 65.0% | |
| GGGATGTTCCTGCGGTCACG+AGG | + | chr2_2:25463555-25463574 | Msa0245650:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 25462653 | 25464021 | 25462653 | ID=Msa0245650;Name=Msa0245650 |
| chr2_2 | mRNA | 25462653 | 25464021 | 25462653 | ID=Msa0245650-mRNA-1;Parent=Msa0245650;Name=Msa0245650-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|395 |
| chr2_2 | exon | 25462653 | 25462803 | 25462653 | ID=Msa0245650-mRNA-1:exon:9594;Parent=Msa0245650-mRNA-1 |
| chr2_2 | exon | 25462985 | 25464021 | 25462985 | ID=Msa0245650-mRNA-1:exon:9595;Parent=Msa0245650-mRNA-1 |
| chr2_2 | CDS | 25462653 | 25462803 | 25462653 | ID=Msa0245650-mRNA-1:cds;Parent=Msa0245650-mRNA-1 |
| chr2_2 | CDS | 25462985 | 25464021 | 25462985 | ID=Msa0245650-mRNA-1:cds;Parent=Msa0245650-mRNA-1 |
| Gene Sequence |
| Protein sequence |
