Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414970 | sp|Q9LVQ8|P2C80_ARATH | 53.483 | 402 | 168 | 7 | 47 | 441 | 25 | 414 | 2.31e-131 | 388 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414970 | G7KC88 | 94.889 | 450 | 17 | 1 | 1 | 444 | 1 | 450 | 0.0 | 825 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1414970 | 0.837197 | 5.991258e-57 | -8.615850e-47 |
| Msa0017120 | Msa1414970 | 0.825736 | 3.983792e-54 | -8.615850e-47 |
| Msa0018870 | Msa1414970 | 0.806864 | 6.686269e-50 | -8.615850e-47 |
| Msa0030000 | Msa1414970 | 0.847499 | 1.112542e-59 | -8.615850e-47 |
| Msa0043680 | Msa1414970 | 0.858086 | 1.048850e-62 | -8.615850e-47 |
| Msa0065390 | Msa1414970 | 0.824527 | 7.690419e-54 | -8.615850e-47 |
| Msa0076550 | Msa1414970 | 0.814579 | 1.434207e-51 | -8.615850e-47 |
| Msa0092660 | Msa1414970 | 0.841308 | 5.142464e-58 | -8.615850e-47 |
| Msa0092680 | Msa1414970 | 0.844551 | 7.047199e-59 | -8.615850e-47 |
| Msa0092730 | Msa1414970 | 0.827668 | 1.378059e-54 | -8.615850e-47 |
| Msa0094420 | Msa1414970 | 0.808830 | 2.554323e-50 | -8.615850e-47 |
| Msa0098700 | Msa1414970 | 0.801323 | 9.503811e-49 | -8.615850e-47 |
| Msa0110710 | Msa1414970 | 0.826048 | 3.359930e-54 | -8.615850e-47 |
| Msa0112340 | Msa1414970 | 0.817844 | 2.670389e-52 | -8.615850e-47 |
| Msa1344350 | Msa1414970 | -0.809194 | 2.134883e-50 | -8.615850e-47 |
| Msa1345470 | Msa1414970 | 0.806524 | 7.888618e-50 | -8.615850e-47 |
| Msa1352290 | Msa1414970 | 0.812935 | 3.301015e-51 | -8.615850e-47 |
| Msa1365210 | Msa1414970 | 0.809191 | 2.138068e-50 | -8.615850e-47 |
| Msa1367600 | Msa1414970 | 0.805956 | 1.039386e-49 | -8.615850e-47 |
| Msa1367940 | Msa1414970 | 0.853616 | 2.123711e-61 | -8.615850e-47 |
| Msa1373500 | Msa1414970 | 0.804979 | 1.665415e-49 | -8.615850e-47 |
| Msa1375630 | Msa1414970 | 0.864911 | 8.648456e-65 | -8.615850e-47 |
| Msa1376530 | Msa1414970 | 0.885775 | 6.077722e-72 | -8.615850e-47 |
| Msa1376640 | Msa1414970 | 0.843781 | 1.134317e-58 | -8.615850e-47 |
| Msa1381130 | Msa1414970 | 0.825842 | 3.759478e-54 | -8.615850e-47 |
| Msa1403900 | Msa1414970 | 0.804891 | 1.737324e-49 | -8.615850e-47 |
| Msa1404370 | Msa1414970 | 0.806809 | 6.868244e-50 | -8.615850e-47 |
| Msa1405770 | Msa1414970 | 0.816109 | 6.551754e-52 | -8.615850e-47 |
| Msa1410170 | Msa1414970 | 0.815014 | 1.148248e-51 | -8.615850e-47 |
| Msa1414970 | Msa1426870 | 0.810076 | 1.379490e-50 | -8.615850e-47 |
| Msa1414970 | Msa1442030 | 0.804916 | 1.716911e-49 | -8.615850e-47 |
| Msa1414970 | Msa1456650 | 0.827143 | 1.840963e-54 | -8.615850e-47 |
| Msa1414970 | Msa1460650 | 0.841392 | 4.885693e-58 | -8.615850e-47 |
| Msa0606140 | Msa1414970 | 0.834865 | 2.341057e-56 | -8.615850e-47 |
| Msa0607300 | Msa1414970 | 0.810960 | 8.890513e-51 | -8.615850e-47 |
| Msa0635990 | Msa1414970 | 0.805089 | 1.579744e-49 | -8.615850e-47 |
| Msa0642650 | Msa1414970 | 0.801967 | 7.012377e-49 | -8.615850e-47 |
| Msa0657220 | Msa1414970 | 0.816091 | 6.611717e-52 | -8.615850e-47 |
| Msa0669220 | Msa1414970 | 0.818361 | 2.040679e-52 | -8.615850e-47 |
| Msa0681890 | Msa1414970 | 0.824765 | 6.759713e-54 | -8.615850e-47 |
| Msa0686610 | Msa1414970 | 0.806917 | 6.517444e-50 | -8.615850e-47 |
| Msa0701320 | Msa1414970 | 0.807574 | 4.729039e-50 | -8.615850e-47 |
| Msa0703720 | Msa1414970 | 0.802017 | 6.850203e-49 | -8.615850e-47 |
| Msa0703760 | Msa1414970 | 0.819819 | 9.507251e-53 | -8.615850e-47 |
| Msa0704720 | Msa1414970 | 0.811509 | 6.756874e-51 | -8.615850e-47 |
| Msa0706410 | Msa1414970 | 0.805903 | 1.066412e-49 | -8.615850e-47 |
| Msa0707780 | Msa1414970 | 0.827646 | 1.394480e-54 | -8.615850e-47 |
| Msa0709480 | Msa1414970 | 0.810370 | 1.192287e-50 | -8.615850e-47 |
| Msa0716350 | Msa1414970 | 0.988366 | 9.772259e-174 | -8.615850e-47 |
| Msa0720000 | Msa1414970 | 0.808649 | 2.791490e-50 | -8.615850e-47 |
| Msa0730180 | Msa1414970 | 0.817811 | 2.717512e-52 | -8.615850e-47 |
| Msa0735470 | Msa1414970 | 0.816998 | 4.141620e-52 | -8.615850e-47 |
| Msa0743100 | Msa1414970 | 0.808976 | 2.376336e-50 | -8.615850e-47 |
| Msa0814760 | Msa1414970 | 0.811120 | 8.206480e-51 | -8.615850e-47 |
| Msa0125230 | Msa1414970 | 0.838118 | 3.477447e-57 | -8.615850e-47 |
| Msa0137600 | Msa1414970 | 0.830895 | 2.269629e-55 | -8.615850e-47 |
| Msa0139740 | Msa1414970 | 0.835482 | 1.635940e-56 | -8.615850e-47 |
| Msa0146470 | Msa1414970 | 0.815617 | 8.433175e-52 | -8.615850e-47 |
| Msa0157020 | Msa1414970 | 0.824443 | 8.048601e-54 | -8.615850e-47 |
| Msa0175900 | Msa1414970 | 0.802324 | 5.920432e-49 | -8.615850e-47 |
| Msa0185390 | Msa1414970 | 0.822019 | 2.963725e-53 | -8.615850e-47 |
| Msa0185550 | Msa1414970 | 0.828066 | 1.105108e-54 | -8.615850e-47 |
| Msa0203520 | Msa1414970 | 0.812693 | 3.728567e-51 | -8.615850e-47 |
| Msa0207000 | Msa1414970 | 0.810888 | 9.212104e-51 | -8.615850e-47 |
| Msa0209780 | Msa1414970 | 0.848227 | 7.009644e-60 | -8.615850e-47 |
| Msa0210780 | Msa1414970 | 0.820601 | 6.293970e-53 | -8.615850e-47 |
| Msa0210840 | Msa1414970 | 0.813690 | 2.252596e-51 | -8.615850e-47 |
| Msa0222120 | Msa1414970 | 0.800136 | 1.660559e-48 | -8.615850e-47 |
| Msa0223280 | Msa1414970 | 0.801358 | 9.350914e-49 | -8.615850e-47 |
| Msa0224960 | Msa1414970 | 0.825135 | 5.529286e-54 | -8.615850e-47 |
| Msa0225010 | Msa1414970 | 0.830032 | 3.690757e-55 | -8.615850e-47 |
| Msa0230400 | Msa1414970 | 0.829136 | 6.092789e-55 | -8.615850e-47 |
| Msa1229050 | Msa1414970 | 0.808837 | 2.545349e-50 | -8.615850e-47 |
| Msa1248400 | Msa1414970 | 0.814862 | 1.241034e-51 | -8.615850e-47 |
| Msa1258940 | Msa1414970 | 0.807669 | 4.514884e-50 | -8.615850e-47 |
| Msa1263590 | Msa1414970 | 0.807861 | 4.110539e-50 | -8.615850e-47 |
| Msa1263670 | Msa1414970 | 0.812100 | 5.023863e-51 | -8.615850e-47 |
| Msa1264110 | Msa1414970 | 0.855430 | 6.343598e-62 | -8.615850e-47 |
| Msa1271490 | Msa1414970 | 0.804887 | 1.740852e-49 | -8.615850e-47 |
| Msa1271510 | Msa1414970 | 0.823871 | 1.096986e-53 | -8.615850e-47 |
| Msa1271600 | Msa1414970 | 0.808021 | 3.800142e-50 | -8.615850e-47 |
| Msa1309360 | Msa1414970 | 0.803980 | 2.690732e-49 | -8.615850e-47 |
| Msa1323060 | Msa1414970 | 0.802931 | 4.438989e-49 | -8.615850e-47 |
| Msa1325980 | Msa1414970 | 0.809307 | 2.018661e-50 | -8.615850e-47 |
| Msa1327820 | Msa1414970 | 0.812920 | 3.325194e-51 | -8.615850e-47 |
| Msa0376900 | Msa1414970 | 0.808007 | 3.826031e-50 | -8.615850e-47 |
| Msa0380310 | Msa1414970 | 0.801888 | 7.279561e-49 | -8.615850e-47 |
| Msa0380420 | Msa1414970 | 0.870094 | 1.891439e-66 | -8.615850e-47 |
| Msa0382500 | Msa1414970 | 0.815325 | 9.796615e-52 | -8.615850e-47 |
| Msa0393540 | Msa1414970 | 0.817745 | 2.811755e-52 | -8.615850e-47 |
| Msa0417630 | Msa1414970 | 0.853917 | 1.740101e-61 | -8.615850e-47 |
| Msa0421100 | Msa1414970 | 0.801462 | 8.903660e-49 | -8.615850e-47 |
| Msa0421790 | Msa1414970 | 0.809646 | 1.707405e-50 | -8.615850e-47 |
| Msa0421800 | Msa1414970 | 0.824962 | 6.073257e-54 | -8.615850e-47 |
| Msa0429270 | Msa1414970 | 0.813666 | 2.280689e-51 | -8.615850e-47 |
| Msa0432390 | Msa1414970 | 0.815335 | 9.746212e-52 | -8.615850e-47 |
| Msa0432680 | Msa1414970 | 0.812673 | 3.766616e-51 | -8.615850e-47 |
| Msa0434630 | Msa1414970 | 0.827916 | 1.201236e-54 | -8.615850e-47 |
| Msa0459960 | Msa1414970 | 0.840332 | 9.266647e-58 | -8.615850e-47 |
| Msa0462120 | Msa1414970 | 0.802082 | 6.642184e-49 | -8.615850e-47 |
| Msa0463540 | Msa1414970 | 0.811820 | 5.783286e-51 | -8.615850e-47 |
| Msa0466100 | Msa1414970 | 0.815404 | 9.405552e-52 | -8.615850e-47 |
| Msa0467800 | Msa1414970 | 0.827639 | 1.400110e-54 | -8.615850e-47 |
| Msa0467880 | Msa1414970 | 0.814911 | 1.210291e-51 | -8.615850e-47 |
| Msa0476150 | Msa1414970 | 0.818504 | 1.893503e-52 | -8.615850e-47 |
| Msa0477780 | Msa1414970 | 0.863312 | 2.723419e-64 | -8.615850e-47 |
| Msa0992570 | Msa1414970 | 0.820833 | 5.566928e-53 | -8.615850e-47 |
| Msa0992590 | Msa1414970 | 0.864771 | 9.565342e-65 | -8.615850e-47 |
| Msa1002040 | Msa1414970 | 0.827614 | 1.419102e-54 | -8.615850e-47 |
| Msa1011210 | Msa1414970 | 0.826330 | 2.878333e-54 | -8.615850e-47 |
| Msa1022310 | Msa1414970 | 0.813047 | 3.118693e-51 | -8.615850e-47 |
| Msa1028460 | Msa1414970 | 0.851399 | 9.102355e-61 | -8.615850e-47 |
| Msa1070900 | Msa1414970 | 0.819226 | 1.298183e-52 | -8.615850e-47 |
| Msa1084490 | Msa1414970 | 0.812478 | 4.154343e-51 | -8.615850e-47 |
| Msa1102200 | Msa1414970 | 0.805600 | 1.234202e-49 | -8.615850e-47 |
| Msa1106560 | Msa1414970 | 0.815447 | 9.202176e-52 | -8.615850e-47 |
| Msa0253410 | Msa1414970 | 0.822602 | 2.170077e-53 | -8.615850e-47 |
| Msa0257310 | Msa1414970 | 0.808324 | 3.275789e-50 | -8.615850e-47 |
| Msa0259980 | Msa1414970 | 0.800872 | 1.175559e-48 | -8.615850e-47 |
| Msa0274780 | Msa1414970 | 0.822710 | 2.047937e-53 | -8.615850e-47 |
| Msa0280140 | Msa1414970 | 0.803398 | 3.553916e-49 | -8.615850e-47 |
| Msa0285740 | Msa1414970 | 0.800447 | 1.434924e-48 | -8.615850e-47 |
| Msa0290600 | Msa1414970 | 0.832378 | 9.782373e-56 | -8.615850e-47 |
| Msa0292070 | Msa1414970 | 0.804249 | 2.365316e-49 | -8.615850e-47 |
| Msa0296000 | Msa1414970 | 0.805371 | 1.378771e-49 | -8.615850e-47 |
| Msa0301380 | Msa1414970 | 0.803804 | 2.927203e-49 | -8.615850e-47 |
| Msa0304870 | Msa1414970 | 0.807553 | 4.778034e-50 | -8.615850e-47 |
| Msa0307460 | Msa1414970 | 0.810948 | 8.942655e-51 | -8.615850e-47 |
| Msa0314790 | Msa1414970 | 0.817509 | 3.178255e-52 | -8.615850e-47 |
| Msa0319720 | Msa1414970 | 0.809406 | 1.922065e-50 | -8.615850e-47 |
| Msa0333900 | Msa1414970 | 0.814167 | 1.768237e-51 | -8.615850e-47 |
| Msa0334020 | Msa1414970 | 0.820598 | 6.304039e-53 | -8.615850e-47 |
| Msa0339860 | Msa1414970 | 0.805016 | 1.636399e-49 | -8.615850e-47 |
| Msa0341260 | Msa1414970 | 0.808572 | 2.899555e-50 | -8.615850e-47 |
| Msa0349000 | Msa1414970 | 0.802724 | 4.898477e-49 | -8.615850e-47 |
| Msa1112610 | Msa1414970 | 0.801195 | 1.009747e-48 | -8.615850e-47 |
| Msa1121630 | Msa1414970 | 0.812770 | 3.587383e-51 | -8.615850e-47 |
| Msa1125950 | Msa1414970 | 0.800217 | 1.598704e-48 | -8.615850e-47 |
| Msa1151120 | Msa1414970 | 0.802533 | 5.363687e-49 | -8.615850e-47 |
| Msa1156210 | Msa1414970 | 0.803471 | 3.430724e-49 | -8.615850e-47 |
| Msa1166180 | Msa1414970 | 0.831702 | 1.437386e-55 | -8.615850e-47 |
| Msa1166280 | Msa1414970 | 0.829305 | 5.543460e-55 | -8.615850e-47 |
| Msa1171340 | Msa1414970 | 0.812603 | 3.901597e-51 | -8.615850e-47 |
| Msa1178970 | Msa1414970 | 0.816044 | 6.771914e-52 | -8.615850e-47 |
| Msa1183390 | Msa1414970 | 0.811197 | 7.895934e-51 | -8.615850e-47 |
| Msa1215770 | Msa1414970 | 0.802649 | 5.074753e-49 | -8.615850e-47 |
| Msa1220450 | Msa1414970 | -0.815040 | 1.133197e-51 | -8.615850e-47 |
| Msa1220460 | Msa1414970 | -0.805711 | 1.170180e-49 | -8.615850e-47 |
| Msa1220480 | Msa1414970 | -0.804153 | 2.476998e-49 | -8.615850e-47 |
| Msa0488830 | Msa1414970 | 0.809483 | 1.850776e-50 | -8.615850e-47 |
| Msa0514260 | Msa1414970 | 0.817350 | 3.451575e-52 | -8.615850e-47 |
| Msa0524090 | Msa1414970 | 0.851235 | 1.012557e-60 | -8.615850e-47 |
| Msa0524120 | Msa1414970 | 0.832549 | 8.874497e-56 | -8.615850e-47 |
| Msa0528870 | Msa1414970 | 0.800741 | 1.250243e-48 | -8.615850e-47 |
| Msa0539900 | Msa1414970 | 0.809812 | 1.572351e-50 | -8.615850e-47 |
| Msa0545910 | Msa1414970 | 0.807747 | 4.346188e-50 | -8.615850e-47 |
| Msa0554170 | Msa1414970 | 0.800389 | 1.474501e-48 | -8.615850e-47 |
| Msa0558890 | Msa1414970 | 0.805654 | 1.202378e-49 | -8.615850e-47 |
| Msa0576420 | Msa1414970 | 0.812209 | 4.757092e-51 | -8.615850e-47 |
| Msa0844530 | Msa1414970 | 0.835675 | 1.461756e-56 | -8.615850e-47 |
| Msa0870010 | Msa1414970 | 0.843256 | 1.567206e-58 | -8.615850e-47 |
| Msa0875360 | Msa1414970 | 0.878591 | 2.480926e-69 | -8.615850e-47 |
| Msa0905950 | Msa1414970 | 0.812298 | 4.549077e-51 | -8.615850e-47 |
| Msa0906300 | Msa1414970 | 0.817057 | 4.017584e-52 | -8.615850e-47 |
| Msa0906720 | Msa1414970 | 0.839852 | 1.236884e-57 | -8.615850e-47 |
| Msa0907700 | Msa1414970 | 0.801298 | 9.616891e-49 | -8.615850e-47 |
| Msa0922550 | Msa1414970 | 0.824409 | 8.197998e-54 | -8.615850e-47 |
| Msa0922770 | Msa1414970 | 0.815782 | 7.750640e-52 | -8.615850e-47 |
| Msa0925160 | Msa1414970 | 0.817604 | 3.025049e-52 | -8.615850e-47 |
| Msa0926860 | Msa1414970 | 0.869436 | 3.101348e-66 | -8.615850e-47 |
| Msa0938970 | Msa1414970 | 0.826130 | 3.212506e-54 | -8.615850e-47 |
| Msa0940550 | Msa1414970 | 0.805697 | 1.177686e-49 | -8.615850e-47 |
| Msa0946650 | Msa1414970 | 0.805359 | 1.386893e-49 | -8.615850e-47 |
| Msa0948260 | Msa1414970 | 0.802808 | 4.705639e-49 | -8.615850e-47 |
| Msa0955260 | Msa1414970 | 0.817539 | 3.129517e-52 | -8.615850e-47 |
| Msa0975910 | Msa1414970 | 0.836826 | 7.451866e-57 | -8.615850e-47 |
| Msa0977090 | Msa1414970 | 0.803386 | 3.573186e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414970 | MtrunA17_Chr5g0403781 | 94.889 | 450 | 17 | 1 | 1 | 444 | 1 | 450 | 0.0 | 825 |
| Msa1414970 | MtrunA17_Chr1g0154711 | 64.952 | 311 | 92 | 5 | 139 | 441 | 204 | 505 | 1.62e-132 | 391 |
| Msa1414970 | MtrunA17_Chr2g0278991 | 35.827 | 254 | 157 | 4 | 190 | 441 | 1041 | 1290 | 3.91e-40 | 154 |
| Msa1414970 | MtrunA17_Chr3g0106291 | 37.891 | 256 | 137 | 7 | 200 | 441 | 62 | 309 | 1.01e-39 | 144 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1414970 | AT5G66720.1 | 53.483 | 402 | 168 | 7 | 47 | 441 | 25 | 414 | 2.35e-132 | 388 |
| Msa1414970 | AT5G66720.2 | 53.483 | 402 | 165 | 7 | 47 | 441 | 25 | 411 | 7.04e-132 | 387 |
| Msa1414970 | AT4G16580.1 | 63.051 | 295 | 103 | 2 | 155 | 444 | 171 | 464 | 5.64e-129 | 381 |
| Msa1414970 | AT4G33500.1 | 38.129 | 278 | 153 | 4 | 176 | 438 | 446 | 719 | 2.34e-49 | 179 |
| Msa1414970 | AT2G30170.1 | 35.849 | 265 | 147 | 8 | 192 | 441 | 42 | 298 | 4.70e-45 | 159 |
| Msa1414970 | AT2G30170.6 | 38.974 | 195 | 111 | 6 | 192 | 382 | 7 | 197 | 9.26e-38 | 137 |
| Msa1414970 | AT2G30170.3 | 34.934 | 229 | 127 | 7 | 227 | 441 | 1 | 221 | 2.25e-37 | 136 |
| Msa1414970 | AT2G30170.5 | 38.974 | 195 | 111 | 6 | 192 | 382 | 42 | 232 | 3.08e-37 | 137 |
| Msa1414970 | AT2G30170.7 | 38.365 | 159 | 91 | 5 | 227 | 382 | 1 | 155 | 6.21e-30 | 115 |
| Msa1414970 | AT2G30170.4 | 38.255 | 149 | 87 | 4 | 192 | 337 | 42 | 188 | 5.15e-27 | 108 |
| Msa1414970 | AT2G30170.2 | 34.641 | 153 | 82 | 4 | 301 | 441 | 12 | 158 | 1.65e-21 | 91.3 |
Find 121 sgRNAs with CRISPR-Local
Find 260 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCACTAAATGCTATTAATT+TGG | 0.082909 | tig0024162:+7760 | Msa1414970:intron |
| TTCACCTTCCAATGCTATTC+TGG | 0.118484 | tig0024162:+5637 | Msa1414970:CDS |
| TTGCAGATGGTGTTGGTGGC+TGG | 0.202067 | tig0024162:+7060 | Msa1414970:CDS |
| TGTATGGTCCTTTGAATTTC+GGG | 0.205284 | tig0024162:+5801 | Msa1414970:CDS |
| TTGTATGGTCCTTTGAATTT+CGG | 0.224793 | tig0024162:+5800 | Msa1414970:CDS |
| ACCTAATTCGGTTTGGATTA+GGG | 0.230336 | tig0024162:-5034 | None:intergenic |
| AACCTAATTCGGTTTGGATT+AGG | 0.238533 | tig0024162:-5035 | None:intergenic |
| TCCCTAATCCAAACCGAATT+AGG | 0.243177 | tig0024162:+5033 | Msa1414970:five_prime_UTR |
| CCGCTCCTCGCCAATTGATA+TGG | 0.249497 | tig0024162:-7860 | None:intergenic |
| TGAATAGCAATTACTTGAAT+TGG | 0.256640 | tig0024162:-5579 | None:intergenic |
| CAGAATTCGGGTTTGCTTCA+TGG | 0.278734 | tig0024162:+5854 | Msa1414970:CDS |
| TCAGCTGCTGCTCTCGAGTA+TGG | 0.284904 | tig0024162:+8206 | Msa1414970:CDS |
| CTTAATATACACAATGAAAT+TGG | 0.289652 | tig0024162:-8313 | None:intergenic |
| GCCTTCTCTAACACCCTTAC+TGG | 0.296839 | tig0024162:-7176 | None:intergenic |
| AGCAGGTGGTGGTGTGAAAA+AGG | 0.297881 | tig0024162:+5328 | Msa1414970:five_prime_UTR |
| TCGAATTGCTCTTGCGGAAT+TGG | 0.307860 | tig0024162:-7129 | None:intergenic |
| TATTCTGCTTGCTGCTTGGC+TGG | 0.313286 | tig0024162:+5905 | Msa1414970:CDS |
| TGAAGACGAGAAATCGATTA+AGG | 0.317179 | tig0024162:-5104 | None:intergenic |
| TACTGGATTAAAAGAACCTT+TGG | 0.317637 | tig0024162:-7159 | None:intergenic |
| CGGAATTGGCTACAAGTTCC+TGG | 0.321023 | tig0024162:-7115 | None:intergenic |
| GCACTAAATGCTATTAATTT+GGG | 0.330419 | tig0024162:+7761 | Msa1414970:CDS |
| TCGAGAGCAGCAGCTGAAAA+TGG | 0.337984 | tig0024162:-8200 | None:intergenic |
| TTGAACCCGCGTTGTTGAAC+AGG | 0.339753 | tig0024162:-7833 | None:intergenic |
| AGCATTCAGCTTTGAGAGAT+TGG | 0.340008 | tig0024162:-5438 | None:intergenic |
| GGAGTATTAAACCTTGTTAC+TGG | 0.342802 | tig0024162:-5515 | None:intergenic |
| TAGTTGGAGGATTCAGAATT+CGG | 0.347094 | tig0024162:+5841 | Msa1414970:CDS |
| GGATTCATTGTGATAAGAAA+TGG | 0.353829 | tig0024162:+7791 | Msa1414970:CDS |
| GCTATTAATTTGGGTGATAG+TGG | 0.356777 | tig0024162:+7770 | Msa1414970:CDS |
| GTTGTATAATAATGCAAATA+AGG | 0.380102 | tig0024162:-8491 | None:intergenic |
| TCACCTTCCAATGCTATTCT+GGG | 0.384802 | tig0024162:+5638 | Msa1414970:CDS |
| ATCTTATTCTGCTTGCTGCT+TGG | 0.390535 | tig0024162:+5901 | Msa1414970:CDS |
| CCAGGAGATATCATTGTTGC+TGG | 0.394796 | tig0024162:+8029 | Msa1414970:CDS |
| AAGCCCTTGAAGATGTTATC+AGG | 0.397966 | tig0024162:+6951 | Msa1414970:CDS |
| GAGTTTGAGAAGACCGCAAC+AGG | 0.399205 | tig0024162:+5775 | Msa1414970:CDS |
| TGCAGATGGTGTTGGTGGCT+GGG | 0.399726 | tig0024162:+7061 | Msa1414970:CDS |
| CGCTCCTCGCCAATTGATAT+GGG | 0.403739 | tig0024162:-7859 | None:intergenic |
| TTCAAGGGAAGAACTCATAA+AGG | 0.409592 | tig0024162:+5734 | Msa1414970:CDS |
| GTTCAATTTCCCATATCAAT+TGG | 0.409645 | tig0024162:+7850 | Msa1414970:CDS |
| TCAAGGGAAGAACTCATAAA+GGG | 0.414978 | tig0024162:+5735 | Msa1414970:CDS |
| ATGTTAGCCAGTTGTTCATC+AGG | 0.423531 | tig0024162:-5962 | None:intergenic |
| ATGATATCTCCTGGAGCAAC+AGG | 0.431491 | tig0024162:-8020 | None:intergenic |
| CAGCTCTCCTGATGAACAAC+TGG | 0.433048 | tig0024162:+5955 | Msa1414970:CDS |
| GTTGGTGGCTGGGCAGATGT+TGG | 0.436846 | tig0024162:+7071 | Msa1414970:CDS |
| CGATTTCTCGTCTTCACAAT+CGG | 0.438226 | tig0024162:+5111 | Msa1414970:five_prime_UTR |
| AGTTGGAGGATTCAGAATTC+GGG | 0.439453 | tig0024162:+5842 | Msa1414970:CDS |
| GATATTGTTGGAGTGGTTGT+AGG | 0.445908 | tig0024162:+8086 | Msa1414970:CDS |
| GAGTATGGATACCGATTTGA+TGG | 0.447977 | tig0024162:+8221 | Msa1414970:CDS |
| GCATGCTGGTGTGTACTTCA+AGG | 0.449823 | tig0024162:+5718 | Msa1414970:CDS |
| GTTTAAATTTCACGTTACTT+AGG | 0.454614 | tig0024162:+5371 | Msa1414970:five_prime_UTR |
| GTAACGTGAAATTTAAACCT+TGG | 0.459744 | tig0024162:-5366 | None:intergenic |
| AGCGAGCTCTTGACACGAAA+AGG | 0.460925 | tig0024162:+8171 | Msa1414970:CDS |
| TGATCCTGATAACATCTTCA+AGG | 0.466618 | tig0024162:-6955 | None:intergenic |
| AAGGAAGAAAGAGACAAAAC+AGG | 0.467644 | tig0024162:-5536 | None:intergenic |
| ACTGGATTAAAAGAACCTTT+GGG | 0.468734 | tig0024162:-7158 | None:intergenic |
| TGTAAGACACGACAACTGTT+AGG | 0.469269 | tig0024162:-8259 | None:intergenic |
| AGAGCTAGGTAGATCACTTT+CGG | 0.471214 | tig0024162:-7885 | None:intergenic |
| ATCATTGTTGCTGGAACAGA+TGG | 0.479550 | tig0024162:+8038 | Msa1414970:CDS |
| ATATCACTCATTGACTGAGC+TGG | 0.489631 | tig0024162:-8285 | None:intergenic |
| TTTACAGTACCTGTTGCTCC+AGG | 0.495219 | tig0024162:+8011 | Msa1414970:CDS |
| ATGTACAACAACGATATTGT+TGG | 0.496451 | tig0024162:+8074 | Msa1414970:CDS |
| TGCTCAGAAGATAGCAGCAT+TGG | 0.497423 | tig0024162:+8142 | Msa1414970:CDS |
| AACATCTCCCAGAATAGCAT+TGG | 0.499454 | tig0024162:-5645 | None:intergenic |
| CCAGCAACAATGATATCTCC+TGG | 0.503201 | tig0024162:-8029 | None:intergenic |
| CAAGTTTGCCTCCATCAAAT+CGG | 0.504453 | tig0024162:-8232 | None:intergenic |
| TGTGAAGATGAACAAGCAAT+TGG | 0.507426 | tig0024162:+7035 | Msa1414970:CDS |
| CGTTGGTGCAAGAAAATCAA+TGG | 0.508086 | tig0024162:+5610 | Msa1414970:CDS |
| GATTCATTGTGATAAGAAAT+GGG | 0.509981 | tig0024162:+7792 | Msa1414970:CDS |
| CCTCCAACTAGCATCAAAAG+TGG | 0.518120 | tig0024162:-5828 | None:intergenic |
| ATCCAGATAAGGTGGCGACT+GGG | 0.519570 | tig0024162:+6991 | Msa1414970:CDS |
| CATCCAGATAAGGTGGCGAC+TGG | 0.520452 | tig0024162:+6990 | Msa1414970:CDS |
| ATCTTCTGAGCAGTTGCTTG+TGG | 0.525652 | tig0024162:-8131 | None:intergenic |
| CTACCTACCACATCCAGATA+AGG | 0.525784 | tig0024162:+6980 | Msa1414970:CDS |
| CCAAATAAAACTAAAACGCT+AGG | 0.526896 | tig0024162:+4980 | Msa1414970:five_prime_UTR |
| CAGTTGTTCATCAGGAGAGC+TGG | 0.532046 | tig0024162:-5954 | None:intergenic |
| TAGTTCAATTCTGTTAAAGC+AGG | 0.536319 | tig0024162:+5311 | Msa1414970:five_prime_UTR |
| GAAAGTGATCTACCTAGCTC+TGG | 0.538312 | tig0024162:+7887 | Msa1414970:CDS |
| CAAGATTTCACAAAGCATGC+TGG | 0.538735 | tig0024162:+5704 | Msa1414970:CDS |
| GGTGCAACTAGAGCTAGATT+AGG | 0.539864 | tig0024162:+8107 | Msa1414970:CDS |
| ATTGGTGTTGCAGATGGTGT+TGG | 0.543019 | tig0024162:+7053 | Msa1414970:CDS |
| TTCCTCTCGAATTGCTCTTG+CGG | 0.547274 | tig0024162:-7135 | None:intergenic |
| TTCAATTCTGTTAAAGCAGG+TGG | 0.547645 | tig0024162:+5314 | Msa1414970:five_prime_UTR |
| GGTGTTGCAGATGGTGTTGG+TGG | 0.549063 | tig0024162:+7056 | Msa1414970:CDS |
| GTCGAGAAATTCTTTGTCCA+CGG | 0.551550 | tig0024162:-5878 | None:intergenic |
| TCCAGATAAGGTGGCGACTG+GGG | 0.551906 | tig0024162:+6992 | Msa1414970:CDS |
| AACTTTACCTCGCCAGAGCT+AGG | 0.556889 | tig0024162:-7899 | None:intergenic |
| CATGCTGGTGTGTACTTCAA+GGG | 0.557081 | tig0024162:+5719 | Msa1414970:CDS |
| GTCGCCACCTTATCTGGATG+TGG | 0.559731 | tig0024162:-6987 | None:intergenic |
| GGAATTGGCTACAAGTTCCT+GGG | 0.570141 | tig0024162:-7114 | None:intergenic |
| GTGGAACGCCCGAAATTCAA+AGG | 0.571207 | tig0024162:-5809 | None:intergenic |
| CGGGTTTGCTTCATGGACCG+TGG | 0.571395 | tig0024162:+5861 | Msa1414970:CDS |
| AATTCTGTTAAAGCAGGTGG+TGG | 0.574430 | tig0024162:+5317 | Msa1414970:five_prime_UTR |
| TGAACCCGCGTTGTTGAACA+GGG | 0.574747 | tig0024162:-7832 | None:intergenic |
| TCCAGTAAGGGTGTTAGAGA+AGG | 0.582497 | tig0024162:+7175 | Msa1414970:CDS |
| TTAGCTGCCATGCTACACTT+AGG | 0.586952 | tig0024162:+8426 | Msa1414970:three_prime_UTR |
| TATCATTGCTCTTATCGATG+AGG | 0.593917 | tig0024162:+7238 | Msa1414970:CDS |
| CCACCTTATCTGGATGTGGT+AGG | 0.594139 | tig0024162:-6983 | None:intergenic |
| AACATAGTGTGCCAGTAACA+AGG | 0.595078 | tig0024162:+5504 | Msa1414970:CDS |
| GCAGATGTTGGTGTTAATGC+AGG | 0.595326 | tig0024162:+7083 | Msa1414970:CDS |
| CCATATCAATTGGCGAGGAG+CGG | 0.596295 | tig0024162:+7860 | Msa1414970:CDS |
| TGCTATTCAAGCAATAACGT+TGG | 0.597168 | tig0024162:+5593 | Msa1414970:CDS |
| CCAGATAAGGTGGCGACTGG+GGG | 0.601048 | tig0024162:+6993 | Msa1414970:CDS |
| CAAGCAATTGGTGTTGCAGA+TGG | 0.607010 | tig0024162:+7047 | Msa1414970:CDS |
| AGTCCCCTGTTCAACAACGC+GGG | 0.619635 | tig0024162:+7828 | Msa1414970:CDS |
| GATCCTGATAACATCTTCAA+GGG | 0.620287 | tig0024162:-6954 | None:intergenic |
| TAATGCAGGACTGTATGCCC+AGG | 0.622814 | tig0024162:+7097 | Msa1414970:CDS |
| GGACCATACAAAACCTGTTG+CGG | 0.623270 | tig0024162:-5788 | None:intergenic |
| AGCAATGATACAAACAGTTG+AGG | 0.624236 | tig0024162:-7225 | None:intergenic |
| ATTTCCCATATCAATTGGCG+AGG | 0.641059 | tig0024162:+7855 | Msa1414970:CDS |
| AAGCATTCCTAAGTGTAGCA+TGG | 0.641129 | tig0024162:-8433 | None:intergenic |
| TCTCCCAGAATAGCATTGGA+AGG | 0.642675 | tig0024162:-5641 | None:intergenic |
| CAACAACGATATTGTTGGAG+TGG | 0.648581 | tig0024162:+8079 | Msa1414970:CDS |
| CCTACCACATCCAGATAAGG+TGG | 0.649572 | tig0024162:+6983 | Msa1414970:CDS |
| TGATCTACCTAGCTCTGGCG+AGG | 0.657103 | tig0024162:+7892 | Msa1414970:CDS |
| TATGGATACCGATTTGATGG+AGG | 0.658318 | tig0024162:+8224 | Msa1414970:CDS |
| ACTCATAAAGGGTTTGTGCG+AGG | 0.664894 | tig0024162:+5746 | Msa1414970:CDS |
| TTCGCGAAACAATAGTAACA+AGG | 0.665340 | tig0024162:+5477 | Msa1414970:CDS |
| TTCCGCAAGAGCAATTCGAG+AGG | 0.688045 | tig0024162:+7133 | Msa1414970:CDS |
| GCAATTCGAGAGGAACCCAA+AGG | 0.688593 | tig0024162:+7143 | Msa1414970:CDS |
| GTGTATATTAAGATGCTATG+CGG | 0.703785 | tig0024162:+8324 | Msa1414970:three_prime_UTR |
| AAGTCCCCTGTTCAACAACG+CGG | 0.711155 | tig0024162:+7827 | Msa1414970:CDS |
| GAACCCGCGTTGTTGAACAG+GGG | 0.730041 | tig0024162:-7831 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATATTACAGAAATTTT+AGG | + | tig0024162:6195-6214 | Msa1414970:intron | 10.0% |
| !! | TAAAAAAAAAAAAAATGCAA+AGG | - | tig0024162:8360-8379 | None:intergenic | 10.0% |
| !! | TGAAGAAAAAAAAAATCATT+GGG | - | tig0024162:5233-5252 | None:intergenic | 15.0% |
| !! | ATGAAGAAAAAAAAAATCAT+TGG | - | tig0024162:5234-5253 | None:intergenic | 15.0% |
| !!! | TAAATCATGGTTTTAAATTA+TGG | - | tig0024162:6320-6339 | None:intergenic | 15.0% |
| !! | GAATTAATTAAATAACAACT+TGG | + | tig0024162:6391-6410 | Msa1414970:intron | 15.0% |
| !!! | AAATATCTATTTTCTTTCTT+TGG | - | tig0024162:8523-8542 | None:intergenic | 15.0% |
| !!! | AATTTTAATGTTTCAGAATC+TGG | + | tig0024162:5285-5304 | Msa1414970:intron | 20.0% |
| !!! | ATTTTAATGTTTCAGAATCT+GGG | + | tig0024162:5286-5305 | Msa1414970:intron | 20.0% |
| !! | CTATTTCAAACAACATAAAT+AGG | - | tig0024162:6075-6094 | None:intergenic | 20.0% |
| !!! | ATTTATGTTGTTTGAAATAG+AGG | + | tig0024162:6075-6094 | Msa1414970:intron | 20.0% |
| !! | TTATTTAATTAATTCGTGAC+AGG | - | tig0024162:6386-6405 | None:intergenic | 20.0% |
| !! | AAAGAATGAAAATTAATCAG+TGG | - | tig0024162:7720-7739 | None:intergenic | 20.0% |
| !!! | TGATTAATTTTCATTCTTTG+TGG | + | tig0024162:7721-7740 | Msa1414970:intron | 20.0% |
| !! | CTTAATATACACAATGAAAT+TGG | - | tig0024162:8316-8335 | None:intergenic | 20.0% |
| !!! | GTATTTTTTTCTCTAGAAAA+AGG | + | tig0024162:8456-8475 | Msa1414970:three_prime_UTR | 20.0% |
| !! | GTTGTATAATAATGCAAATA+AGG | - | tig0024162:8494-8513 | None:intergenic | 20.0% |
| ! | TTAAGGTTGAAAAATTTGAG+AGG | - | tig0024162:5090-5109 | None:intergenic | 25.0% |
| ! | AAGACTGAAATAGAGTTAAT+GGG | - | tig0024162:5169-5188 | None:intergenic | 25.0% |
| ! | GTTTAAATTTCACGTTACTT+AGG | + | tig0024162:5371-5390 | Msa1414970:five_prime_UTR | 25.0% |
| ! | TGAATAGCAATTACTTGAAT+TGG | - | tig0024162:5582-5601 | None:intergenic | 25.0% |
| ! | TCAAACAACATAAATAGGAT+AGG | - | tig0024162:6070-6089 | None:intergenic | 25.0% |
| !! | CATCAGTAATATAAAGGTTT+TGG | - | tig0024162:6287-6306 | None:intergenic | 25.0% |
| ! | AAACCTTTATATTACTGATG+CGG | + | tig0024162:6287-6306 | Msa1414970:intron | 25.0% |
| ! | TATTAGAGAAACCATTAGAA+AGG | + | tig0024162:6743-6762 | Msa1414970:intron | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | tig0024162:6792-6811 | None:intergenic | 25.0% |
| ! | ATTGTACAAAATTTCCATGT+TGG | - | tig0024162:7391-7410 | None:intergenic | 25.0% |
| !! | AATTTTGTACAATTCATGTC+TGG | + | tig0024162:7398-7417 | Msa1414970:intron | 25.0% |
| ! | TATTTAATTGATTGAGTGAC+AGG | - | tig0024162:7551-7570 | None:intergenic | 25.0% |
| ! | GTACTTAAAAACTTAAGACT+CGG | - | tig0024162:7608-7627 | None:intergenic | 25.0% |
| ! | GCACTAAATGCTATTAATTT+GGG | + | tig0024162:7761-7780 | Msa1414970:CDS | 25.0% |
| ! | GATTCATTGTGATAAGAAAT+GGG | + | tig0024162:7792-7811 | Msa1414970:CDS | 25.0% |
| ! | AAGTTTATCAATTTATGTGC+AGG | + | tig0024162:7986-8005 | Msa1414970:intron | 25.0% |
| ! | AAAAAAAAAATGCAAAGGAG+AGG | - | tig0024162:8355-8374 | None:intergenic | 25.0% |
| !! | ATCTATTTTCTTTCTTTGGA+GGG | - | tig0024162:8519-8538 | None:intergenic | 25.0% |
| !! | TATCTATTTTCTTTCTTTGG+AGG | - | tig0024162:8520-8539 | None:intergenic | 25.0% |
| !!! | CCTAGCGTTTTAGTTTTATT+TGG | - | tig0024162:4983-5002 | None:intergenic | 30.0% |
| CCAAATAAAACTAAAACGCT+AGG | + | tig0024162:4980-4999 | Msa1414970:five_prime_UTR | 30.0% | |
| GAAGACTGAAATAGAGTTAA+TGG | - | tig0024162:5170-5189 | None:intergenic | 30.0% | |
| TAGTTCAATTCTGTTAAAGC+AGG | + | tig0024162:5311-5330 | Msa1414970:five_prime_UTR | 30.0% | |
| GTAACGTGAAATTTAAACCT+TGG | - | tig0024162:5369-5388 | None:intergenic | 30.0% | |
| ! | TTAGGACTATTTTGCATACA+AGG | + | tig0024162:5389-5408 | Msa1414970:five_prime_UTR | 30.0% |
| TAAAAAAGAACTCGAACACA+AGG | - | tig0024162:5558-5577 | None:intergenic | 30.0% | |
| TTGTATGGTCCTTTGAATTT+CGG | + | tig0024162:5800-5819 | Msa1414970:CDS | 30.0% | |
| CATAAATAGGATAGGCTTAT+TGG | - | tig0024162:6062-6081 | None:intergenic | 30.0% | |
| AACCTTTATATTACTGATGC+GGG | + | tig0024162:6288-6307 | Msa1414970:intron | 30.0% | |
| ATTAAATAACAACTTGGCAG+CGG | + | tig0024162:6397-6416 | Msa1414970:intron | 30.0% | |
| TTGATCTACTCTTCTTACAA+CGG | - | tig0024162:6676-6695 | None:intergenic | 30.0% | |
| TGTAAGAAGAGTAGATCAAA+TGG | + | tig0024162:6677-6696 | Msa1414970:intron | 30.0% | |
| ! | GTTTCTCTAATAGTTTTCCT+AGG | - | tig0024162:6735-6754 | None:intergenic | 30.0% |
| AACCATTAGAAAGGATTTAG+AGG | + | tig0024162:6752-6771 | Msa1414970:intron | 30.0% | |
| TGGTTTATGATAGAACACTA+TGG | + | tig0024162:6796-6815 | Msa1414970:intron | 30.0% | |
| AATGCTCAGGATAAGTAAAT+GGG | - | tig0024162:6897-6916 | None:intergenic | 30.0% | |
| AATACAAGTATTCAATGCTC+AGG | - | tig0024162:6910-6929 | None:intergenic | 30.0% | |
| ACTGGATTAAAAGAACCTTT+GGG | - | tig0024162:7161-7180 | None:intergenic | 30.0% | |
| TACTGGATTAAAAGAACCTT+TGG | - | tig0024162:7162-7181 | None:intergenic | 30.0% | |
| ! | AAGGTTCTTTTAATCCAGTA+AGG | + | tig0024162:7162-7181 | Msa1414970:CDS | 30.0% |
| ! | AGGTTCTTTTAATCCAGTAA+GGG | + | tig0024162:7163-7182 | Msa1414970:CDS | 30.0% |
| ! | TTGTTTTCTTTTCACCAACA+TGG | + | tig0024162:7374-7393 | Msa1414970:intron | 30.0% |
| !!! | TTCTCCAAACTTCTTGTTTT+GGG | + | tig0024162:7462-7481 | Msa1414970:intron | 30.0% |
| !! | TTTTAAGTACAATGTCCGAT+TGG | + | tig0024162:7618-7637 | Msa1414970:intron | 30.0% |
| GATACAGCTAAAATACCAAT+CGG | - | tig0024162:7636-7655 | None:intergenic | 30.0% | |
| ! | CTTTTCACATAGATCAAGAA+AGG | - | tig0024162:7687-7706 | None:intergenic | 30.0% |
| ATTCTTTGTGGTTGTTTACT+TGG | + | tig0024162:7733-7752 | Msa1414970:intron | 30.0% | |
| AATTAATAGCATTTAGTGCC+TGG | - | tig0024162:7760-7779 | None:intergenic | 30.0% | |
| GGCACTAAATGCTATTAATT+TGG | + | tig0024162:7760-7779 | Msa1414970:intron | 30.0% | |
| GGATTCATTGTGATAAGAAA+TGG | + | tig0024162:7791-7810 | Msa1414970:CDS | 30.0% | |
| GTTCAATTTCCCATATCAAT+TGG | + | tig0024162:7850-7869 | Msa1414970:CDS | 30.0% | |
| ATGTACAACAACGATATTGT+TGG | + | tig0024162:8074-8093 | Msa1414970:CDS | 30.0% | |
| GTGTATATTAAGATGCTATG+CGG | + | tig0024162:8324-8343 | Msa1414970:three_prime_UTR | 30.0% | |
| ! | TCTCTAGAAAAAGGCTATTA+TGG | + | tig0024162:8465-8484 | Msa1414970:three_prime_UTR | 30.0% |
| !! | ACCTAATTCGGTTTGGATTA+GGG | - | tig0024162:5037-5056 | None:intergenic | 35.0% |
| !! | AACCTAATTCGGTTTGGATT+AGG | - | tig0024162:5038-5057 | None:intergenic | 35.0% |
| CACAAAAACCTAATTCGGTT+TGG | - | tig0024162:5044-5063 | None:intergenic | 35.0% | |
| ! | CAAACCGAATTAGGTTTTTG+TGG | + | tig0024162:5042-5061 | Msa1414970:five_prime_UTR | 35.0% |
| GCAACCACAAAAACCTAATT+CGG | - | tig0024162:5049-5068 | None:intergenic | 35.0% | |
| TGAAGACGAGAAATCGATTA+AGG | - | tig0024162:5107-5126 | None:intergenic | 35.0% | |
| TAGAGTTAATGGGAGAAAGA+GGG | - | tig0024162:5159-5178 | None:intergenic | 35.0% | |
| ATAGAGTTAATGGGAGAAAG+AGG | - | tig0024162:5160-5179 | None:intergenic | 35.0% | |
| TTCAATTCTGTTAAAGCAGG+TGG | + | tig0024162:5314-5333 | Msa1414970:five_prime_UTR | 35.0% | |
| ! | AAGCTGAATGCTTCGATTTT+CGG | + | tig0024162:5449-5468 | Msa1414970:CDS | 35.0% |
| TTCGCGAAACAATAGTAACA+AGG | + | tig0024162:5477-5496 | Msa1414970:CDS | 35.0% | |
| ! | GGAGTATTAAACCTTGTTAC+TGG | - | tig0024162:5518-5537 | None:intergenic | 35.0% |
| AAGGAAGAAAGAGACAAAAC+AGG | - | tig0024162:5539-5558 | None:intergenic | 35.0% | |
| TGCTATTCAAGCAATAACGT+TGG | + | tig0024162:5593-5612 | Msa1414970:CDS | 35.0% | |
| TTCAAGGGAAGAACTCATAA+AGG | + | tig0024162:5734-5753 | Msa1414970:CDS | 35.0% | |
| TCAAGGGAAGAACTCATAAA+GGG | + | tig0024162:5735-5754 | Msa1414970:CDS | 35.0% | |
| TGTATGGTCCTTTGAATTTC+GGG | + | tig0024162:5801-5820 | Msa1414970:CDS | 35.0% | |
| TAGTTGGAGGATTCAGAATT+CGG | + | tig0024162:5841-5860 | Msa1414970:CDS | 35.0% | |
| TAGGATAGGCTTATTGGTAT+TGG | - | tig0024162:6056-6075 | None:intergenic | 35.0% | |
| AATGCAGTATGTAGTTGTAG+TGG | + | tig0024162:6155-6174 | Msa1414970:intron | 35.0% | |
| AACCCGCATCAGTAATATAA+AGG | - | tig0024162:6293-6312 | None:intergenic | 35.0% | |
| GGTGAGGAGAATATAAATCA+TGG | - | tig0024162:6333-6352 | None:intergenic | 35.0% | |
| ATCTCACTGGAAATCAGTAA+TGG | - | tig0024162:6354-6373 | None:intergenic | 35.0% | |
| TTAATTCGTGACAGGAAACT+TGG | - | tig0024162:6378-6397 | None:intergenic | 35.0% | |
| TTATACTACTCCGTGTTGTA+TGG | + | tig0024162:6442-6461 | Msa1414970:intron | 35.0% | |
| TCTACCAACTTCTCTACTAT+AGG | - | tig0024162:6606-6625 | None:intergenic | 35.0% | |
| !! | TAGAGAAGTTGGTAGAAAAC+AGG | + | tig0024162:6610-6629 | Msa1414970:intron | 35.0% |
| AAGAAGAGTAGATCAAATGG+AGG | + | tig0024162:6680-6699 | Msa1414970:intron | 35.0% | |
| GACCTCTAAATCCTTTCTAA+TGG | - | tig0024162:6757-6776 | None:intergenic | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | tig0024162:6776-6795 | Msa1414970:intron | 35.0% |
| CAATGCTCAGGATAAGTAAA+TGG | - | tig0024162:6898-6917 | None:intergenic | 35.0% | |
| GATCCTGATAACATCTTCAA+GGG | - | tig0024162:6957-6976 | None:intergenic | 35.0% | |
| TGATCCTGATAACATCTTCA+AGG | - | tig0024162:6958-6977 | None:intergenic | 35.0% | |
| TGTGAAGATGAACAAGCAAT+TGG | + | tig0024162:7035-7054 | Msa1414970:CDS | 35.0% | |
| AGCAATGATACAAACAGTTG+AGG | - | tig0024162:7228-7247 | None:intergenic | 35.0% | |
| TATCATTGCTCTTATCGATG+AGG | + | tig0024162:7238-7257 | Msa1414970:CDS | 35.0% | |
| !!! | AAGTCAGTTTTGTTGATTGC+AGG | + | tig0024162:7296-7315 | Msa1414970:intron | 35.0% |
| !! | GTTTTGTTGATTGCAGGTTA+AGG | + | tig0024162:7302-7321 | Msa1414970:intron | 35.0% |
| AGAATGCATATCAAGACTCA+TGG | - | tig0024162:7443-7462 | None:intergenic | 35.0% | |
| !! | CTTCTCCAAACTTCTTGTTT+TGG | + | tig0024162:7461-7480 | Msa1414970:intron | 35.0% |
| !!! | TCTCCAAACTTCTTGTTTTG+GGG | + | tig0024162:7463-7482 | Msa1414970:intron | 35.0% |
| TATCCCCAAAACAAGAAGTT+TGG | - | tig0024162:7469-7488 | None:intergenic | 35.0% | |
| TTCTCTACAGTCTACAAAAC+TGG | + | tig0024162:7492-7511 | Msa1414970:intron | 35.0% | |
| ACAAACTAGACACTTGTTTG+TGG | - | tig0024162:7524-7543 | None:intergenic | 35.0% | |
| ! | GCTATTAATTTGGGTGATAG+TGG | + | tig0024162:7770-7789 | Msa1414970:CDS | 35.0% |
| TAAAACCACAATCCTAGCAA+TGG | + | tig0024162:7929-7948 | Msa1414970:intron | 35.0% | |
| AAACTTCAATCTCCATTGCT+AGG | - | tig0024162:7944-7963 | None:intergenic | 35.0% | |
| TCCCTAATCCAAACCGAATT+AGG | + | tig0024162:5033-5052 | Msa1414970:five_prime_UTR | 40.0% | |
| CGATTTCTCGTCTTCACAAT+CGG | + | tig0024162:5111-5130 | Msa1414970:five_prime_UTR | 40.0% | |
| AATTCTGTTAAAGCAGGTGG+TGG | + | tig0024162:5317-5336 | Msa1414970:five_prime_UTR | 40.0% | |
| !!! | GGAATGCACTTTTTCATCCA+AGG | + | tig0024162:5349-5368 | Msa1414970:five_prime_UTR | 40.0% |
| !! | AGCATTCAGCTTTGAGAGAT+TGG | - | tig0024162:5441-5460 | None:intergenic | 40.0% |
| AACATAGTGTGCCAGTAACA+AGG | + | tig0024162:5504-5523 | Msa1414970:CDS | 40.0% | |
| CGTTGGTGCAAGAAAATCAA+TGG | + | tig0024162:5610-5629 | Msa1414970:CDS | 40.0% | |
| TTCACCTTCCAATGCTATTC+TGG | + | tig0024162:5637-5656 | Msa1414970:CDS | 40.0% | |
| TCACCTTCCAATGCTATTCT+GGG | + | tig0024162:5638-5657 | Msa1414970:CDS | 40.0% | |
| AACATCTCCCAGAATAGCAT+TGG | - | tig0024162:5648-5667 | None:intergenic | 40.0% | |
| CAAGATTTCACAAAGCATGC+TGG | + | tig0024162:5704-5723 | Msa1414970:CDS | 40.0% | |
| !! | GTTCCACTTTTGATGCTAGT+TGG | + | tig0024162:5825-5844 | Msa1414970:CDS | 40.0% |
| AGTTGGAGGATTCAGAATTC+GGG | + | tig0024162:5842-5861 | Msa1414970:CDS | 40.0% | |
| GTCGAGAAATTCTTTGTCCA+CGG | - | tig0024162:5881-5900 | None:intergenic | 40.0% | |
| ! | ATCTTATTCTGCTTGCTGCT+TGG | + | tig0024162:5901-5920 | Msa1414970:CDS | 40.0% |
| ATGTTAGCCAGTTGTTCATC+AGG | - | tig0024162:5965-5984 | None:intergenic | 40.0% | |
| ACTGGAAATCAGTAATGGTG+AGG | - | tig0024162:6349-6368 | None:intergenic | 40.0% | |
| ACACTTACTTGACTCTGTGT+TGG | - | tig0024162:6492-6511 | None:intergenic | 40.0% | |
| ACAGAGTCAAGTAAGTGTAG+CGG | + | tig0024162:6494-6513 | Msa1414970:intron | 40.0% | |
| AGACTAGACAGGATAGGATT+AGG | + | tig0024162:6547-6566 | Msa1414970:intron | 40.0% | |
| TGACACAATTAGAGAGAGAG+TGG | + | tig0024162:6572-6591 | Msa1414970:intron | 40.0% | |
| GACACAATTAGAGAGAGAGT+GGG | + | tig0024162:6573-6592 | Msa1414970:intron | 40.0% | |
| ACACAATTAGAGAGAGAGTG+GGG | + | tig0024162:6574-6593 | Msa1414970:intron | 40.0% | |
| AGCACCTATAGTAGAGAAGT+TGG | + | tig0024162:6599-6618 | Msa1414970:intron | 40.0% | |
| TGGTAGAAAACAGGCTTAGA+TGG | + | tig0024162:6619-6638 | Msa1414970:intron | 40.0% | |
| GAAAACAGGCTTAGATGGTT+TGG | + | tig0024162:6624-6643 | Msa1414970:intron | 40.0% | |
| TCTTCTTACAACGGCATCTA+CGG | - | tig0024162:6667-6686 | None:intergenic | 40.0% | |
| AAAGAGGTAGAGAAAGACCT+AGG | + | tig0024162:6715-6734 | Msa1414970:intron | 40.0% | |
| GGATTTAGAGGTCAATGAGT+TGG | + | tig0024162:6764-6783 | Msa1414970:intron | 40.0% | |
| AAGCCCTTGAAGATGTTATC+AGG | + | tig0024162:6951-6970 | Msa1414970:CDS | 40.0% | |
| GAAGGCTCACTCAAAAACAA+AGG | + | tig0024162:7193-7212 | Msa1414970:CDS | 40.0% | |
| ! | TCACTCAAAAACAAAGGCGT+TGG | + | tig0024162:7199-7218 | Msa1414970:CDS | 40.0% |
| !! | CACTCAAAAACAAAGGCGTT+GGG | + | tig0024162:7200-7219 | Msa1414970:CDS | 40.0% |
| TAGACACTTGTTTGTGGTAC+AGG | - | tig0024162:7518-7537 | None:intergenic | 40.0% | |
| ATTTCCCATATCAATTGGCG+AGG | + | tig0024162:7855-7874 | Msa1414970:CDS | 40.0% | |
| AGAGCTAGGTAGATCACTTT+CGG | - | tig0024162:7888-7907 | None:intergenic | 40.0% | |
| AATCTCCATTGCTAGGATTG+TGG | - | tig0024162:7937-7956 | None:intergenic | 40.0% | |
| ATCATTGTTGCTGGAACAGA+TGG | + | tig0024162:8038-8057 | Msa1414970:CDS | 40.0% | |
| CAACAACGATATTGTTGGAG+TGG | + | tig0024162:8079-8098 | Msa1414970:CDS | 40.0% | |
| GATATTGTTGGAGTGGTTGT+AGG | + | tig0024162:8086-8105 | Msa1414970:CDS | 40.0% | |
| !! | GAGTATGGATACCGATTTGA+TGG | + | tig0024162:8221-8240 | Msa1414970:CDS | 40.0% |
| !! | TATGGATACCGATTTGATGG+AGG | + | tig0024162:8224-8243 | Msa1414970:CDS | 40.0% |
| CAAGTTTGCCTCCATCAAAT+CGG | - | tig0024162:8235-8254 | None:intergenic | 40.0% | |
| TGTAAGACACGACAACTGTT+AGG | - | tig0024162:8262-8281 | None:intergenic | 40.0% | |
| ! | ATATCACTCATTGACTGAGC+TGG | - | tig0024162:8288-8307 | None:intergenic | 40.0% |
| AAGCATTCCTAAGTGTAGCA+TGG | - | tig0024162:8436-8455 | None:intergenic | 40.0% | |
| ! | TCTCCCAGAATAGCATTGGA+AGG | - | tig0024162:5644-5663 | None:intergenic | 45.0% |
| CATGCTGGTGTGTACTTCAA+GGG | + | tig0024162:5719-5738 | Msa1414970:CDS | 45.0% | |
| ACTCATAAAGGGTTTGTGCG+AGG | + | tig0024162:5746-5765 | Msa1414970:CDS | 45.0% | |
| !! | AGACCGCAACAGGTTTTGTA+TGG | + | tig0024162:5785-5804 | Msa1414970:CDS | 45.0% |
| GGACCATACAAAACCTGTTG+CGG | - | tig0024162:5791-5810 | None:intergenic | 45.0% | |
| CCTCCAACTAGCATCAAAAG+TGG | - | tig0024162:5831-5850 | None:intergenic | 45.0% | |
| !! | CCACTTTTGATGCTAGTTGG+AGG | + | tig0024162:5828-5847 | Msa1414970:CDS | 45.0% |
| ! | CAGAATTCGGGTTTGCTTCA+TGG | + | tig0024162:5854-5873 | Msa1414970:CDS | 45.0% |
| GCAGTATGTAGTTGTAGTGG+TGG | + | tig0024162:6158-6177 | Msa1414970:intron | 45.0% | |
| CAGGAAACTTGGTATCTCAC+TGG | - | tig0024162:6367-6386 | None:intergenic | 45.0% | |
| CTACTCCGTGTTGTATGGTA+CGG | + | tig0024162:6447-6466 | Msa1414970:intron | 45.0% | |
| ACACTCCGTACCATACAACA+CGG | - | tig0024162:6455-6474 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | tig0024162:6455-6474 | Msa1414970:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | tig0024162:6456-6475 | Msa1414970:intron | 45.0% |
| ! | AAGTAAGTGTAGCGGAGATG+AGG | + | tig0024162:6502-6521 | Msa1414970:intron | 45.0% |
| AGGATGTTGTGTTGGATGAG+TGG | + | tig0024162:6522-6541 | Msa1414970:intron | 45.0% | |
| GATGAGTGGTAAGACTAGAC+AGG | + | tig0024162:6536-6555 | Msa1414970:intron | 45.0% | |
| GTGGTAAGACTAGACAGGAT+AGG | + | tig0024162:6541-6560 | Msa1414970:intron | 45.0% | |
| CACAATTAGAGAGAGAGTGG+GGG | + | tig0024162:6575-6594 | Msa1414970:intron | 45.0% | |
| CTTCTTACAACGGCATCTAC+GGG | - | tig0024162:6666-6685 | None:intergenic | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | tig0024162:6689-6708 | Msa1414970:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | tig0024162:6699-6718 | Msa1414970:intron | 45.0% | |
| CTACCTACCACATCCAGATA+AGG | + | tig0024162:6980-6999 | Msa1414970:CDS | 45.0% | |
| !! | CAAGCAATTGGTGTTGCAGA+TGG | + | tig0024162:7047-7066 | Msa1414970:CDS | 45.0% |
| !! | ATTGGTGTTGCAGATGGTGT+TGG | + | tig0024162:7053-7072 | Msa1414970:CDS | 45.0% |
| !! | GCAGATGTTGGTGTTAATGC+AGG | + | tig0024162:7083-7102 | Msa1414970:CDS | 45.0% |
| GGAATTGGCTACAAGTTCCT+GGG | - | tig0024162:7117-7136 | None:intergenic | 45.0% | |
| TCGAATTGCTCTTGCGGAAT+TGG | - | tig0024162:7132-7151 | None:intergenic | 45.0% | |
| TTCCTCTCGAATTGCTCTTG+CGG | - | tig0024162:7138-7157 | None:intergenic | 45.0% | |
| !! | TCCAGTAAGGGTGTTAGAGA+AGG | + | tig0024162:7175-7194 | Msa1414970:CDS | 45.0% |
| GCTTCATGCATACTGAACAC+TGG | + | tig0024162:7346-7365 | Msa1414970:intron | 45.0% | |
| GCTGTATCTCGATTCACTGA+AGG | + | tig0024162:7648-7667 | Msa1414970:intron | 45.0% | |
| TGTGGTTGTTTACTTGGTCC+AGG | + | tig0024162:7739-7758 | Msa1414970:intron | 45.0% | |
| GAAAGTGATCTACCTAGCTC+TGG | + | tig0024162:7887-7906 | Msa1414970:CDS | 45.0% | |
| TTTACAGTACCTGTTGCTCC+AGG | + | tig0024162:8011-8030 | Msa1414970:CDS | 45.0% | |
| ATGATATCTCCTGGAGCAAC+AGG | - | tig0024162:8023-8042 | None:intergenic | 45.0% | |
| CCAGCAACAATGATATCTCC+TGG | - | tig0024162:8032-8051 | None:intergenic | 45.0% | |
| CCAGGAGATATCATTGTTGC+TGG | + | tig0024162:8029-8048 | Msa1414970:CDS | 45.0% | |
| GGTGCAACTAGAGCTAGATT+AGG | + | tig0024162:8107-8126 | Msa1414970:CDS | 45.0% | |
| ATCTTCTGAGCAGTTGCTTG+TGG | - | tig0024162:8134-8153 | None:intergenic | 45.0% | |
| TGCTCAGAAGATAGCAGCAT+TGG | + | tig0024162:8142-8161 | Msa1414970:CDS | 45.0% | |
| TTAGCTGCCATGCTACACTT+AGG | + | tig0024162:8426-8445 | Msa1414970:three_prime_UTR | 45.0% | |
| ! | AGCAGGTGGTGGTGTGAAAA+AGG | + | tig0024162:5328-5347 | Msa1414970:five_prime_UTR | 50.0% |
| GCATGCTGGTGTGTACTTCA+AGG | + | tig0024162:5718-5737 | Msa1414970:CDS | 50.0% | |
| GAGTTTGAGAAGACCGCAAC+AGG | + | tig0024162:5775-5794 | Msa1414970:CDS | 50.0% | |
| GTGGAACGCCCGAAATTCAA+AGG | - | tig0024162:5812-5831 | None:intergenic | 50.0% | |
| ! | TATTCTGCTTGCTGCTTGGC+TGG | + | tig0024162:5905-5924 | Msa1414970:CDS | 50.0% |
| CAGTTGTTCATCAGGAGAGC+TGG | - | tig0024162:5957-5976 | None:intergenic | 50.0% | |
| CAGCTCTCCTGATGAACAAC+TGG | + | tig0024162:5955-5974 | Msa1414970:CDS | 50.0% | |
| GCACTATGCAGCTACAGTTG+CGG | + | tig0024162:6240-6259 | Msa1414970:intron | 50.0% | |
| CGGAGATGAGGATGTTGTGT+TGG | + | tig0024162:6514-6533 | Msa1414970:intron | 50.0% | |
| ACTAAGTGGGATCGGCTACA+TGG | - | tig0024162:6833-6852 | None:intergenic | 50.0% | |
| ATGTAGCCGATCCCACTTAG+TGG | + | tig0024162:6832-6851 | Msa1414970:intron | 50.0% | |
| TGTAGCCGATCCCACTTAGT+GGG | + | tig0024162:6833-6852 | Msa1414970:intron | 50.0% | |
| CTTACCCCACTAAGTGGGAT+CGG | - | tig0024162:6841-6860 | None:intergenic | 50.0% | |
| CAAGCCTTACCCCACTAAGT+GGG | - | tig0024162:6846-6865 | None:intergenic | 50.0% | |
| CCACCTTATCTGGATGTGGT+AGG | - | tig0024162:6986-7005 | None:intergenic | 50.0% | |
| CCTACCACATCCAGATAAGG+TGG | + | tig0024162:6983-7002 | Msa1414970:CDS | 50.0% | |
| ATCCAGATAAGGTGGCGACT+GGG | + | tig0024162:6991-7010 | Msa1414970:CDS | 50.0% | |
| TAATGCAGGACTGTATGCCC+AGG | + | tig0024162:7097-7116 | Msa1414970:CDS | 50.0% | |
| CGGAATTGGCTACAAGTTCC+TGG | - | tig0024162:7118-7137 | None:intergenic | 50.0% | |
| TTCCGCAAGAGCAATTCGAG+AGG | + | tig0024162:7133-7152 | Msa1414970:CDS | 50.0% | |
| GCAATTCGAGAGGAACCCAA+AGG | + | tig0024162:7143-7162 | Msa1414970:CDS | 50.0% | |
| GCCTTCTCTAACACCCTTAC+TGG | - | tig0024162:7179-7198 | None:intergenic | 50.0% | |
| AAGTCCCCTGTTCAACAACG+CGG | + | tig0024162:7827-7846 | Msa1414970:CDS | 50.0% | |
| TGAACCCGCGTTGTTGAACA+GGG | - | tig0024162:7835-7854 | None:intergenic | 50.0% | |
| TTGAACCCGCGTTGTTGAAC+AGG | - | tig0024162:7836-7855 | None:intergenic | 50.0% | |
| CGCTCCTCGCCAATTGATAT+GGG | - | tig0024162:7862-7881 | None:intergenic | 50.0% | |
| CCATATCAATTGGCGAGGAG+CGG | + | tig0024162:7860-7879 | Msa1414970:CDS | 50.0% | |
| AACTTTACCTCGCCAGAGCT+AGG | - | tig0024162:7902-7921 | None:intergenic | 50.0% | |
| AGCGAGCTCTTGACACGAAA+AGG | + | tig0024162:8171-8190 | Msa1414970:CDS | 50.0% | |
| TCGAGAGCAGCAGCTGAAAA+TGG | - | tig0024162:8203-8222 | None:intergenic | 50.0% | |
| GTAGCCGATCCCACTTAGTG+GGG | + | tig0024162:6834-6853 | Msa1414970:intron | 55.0% | |
| CGATCCCACTTAGTGGGGTA+AGG | + | tig0024162:6839-6858 | Msa1414970:intron | 55.0% | |
| CCAAGCCTTACCCCACTAAG+TGG | - | tig0024162:6847-6866 | None:intergenic | 55.0% | |
| CCACTTAGTGGGGTAAGGCT+TGG | + | tig0024162:6844-6863 | Msa1414970:intron | 55.0% | |
| GTCGCCACCTTATCTGGATG+TGG | - | tig0024162:6990-7009 | None:intergenic | 55.0% | |
| CATCCAGATAAGGTGGCGAC+TGG | + | tig0024162:6990-7009 | Msa1414970:CDS | 55.0% | |
| TCCAGATAAGGTGGCGACTG+GGG | + | tig0024162:6992-7011 | Msa1414970:CDS | 55.0% | |
| ! | GGTGTTGCAGATGGTGTTGG+TGG | + | tig0024162:7056-7075 | Msa1414970:CDS | 55.0% |
| !! | TTGCAGATGGTGTTGGTGGC+TGG | + | tig0024162:7060-7079 | Msa1414970:CDS | 55.0% |
| !! | TGCAGATGGTGTTGGTGGCT+GGG | + | tig0024162:7061-7080 | Msa1414970:CDS | 55.0% |
| AGTCCCCTGTTCAACAACGC+GGG | + | tig0024162:7828-7847 | Msa1414970:CDS | 55.0% | |
| GAACCCGCGTTGTTGAACAG+GGG | - | tig0024162:7834-7853 | None:intergenic | 55.0% | |
| CCGCTCCTCGCCAATTGATA+TGG | - | tig0024162:7863-7882 | None:intergenic | 55.0% | |
| !! | TGATCTACCTAGCTCTGGCG+AGG | + | tig0024162:7892-7911 | Msa1414970:CDS | 55.0% |
| TCAGCTGCTGCTCTCGAGTA+TGG | + | tig0024162:8206-8225 | Msa1414970:CDS | 55.0% | |
| ! | CGGGTTTGCTTCATGGACCG+TGG | + | tig0024162:5861-5880 | Msa1414970:CDS | 60.0% |
| CTACAGTTGCGGCCGTGATG+TGG | + | tig0024162:6251-6270 | Msa1414970:intron | 60.0% | |
| GGAGCCCTGCAACCACATCA+CGG | - | tig0024162:6266-6285 | None:intergenic | 60.0% | |
| CCAGATAAGGTGGCGACTGG+GGG | + | tig0024162:6993-7012 | Msa1414970:CDS | 60.0% | |
| !! | GTTGGTGGCTGGGCAGATGT+TGG | + | tig0024162:7071-7090 | Msa1414970:CDS | 60.0% |
| TGCGGCCGTGATGTGGTTGC+AGG | + | tig0024162:6258-6277 | Msa1414970:intron | 65.0% | |
| GCGGCCGTGATGTGGTTGCA+GGG | + | tig0024162:6259-6278 | Msa1414970:intron | 65.0% | |
| CCCCCAGTCGCCACCTTATC+TGG | - | tig0024162:6996-7015 | None:intergenic | 65.0% | |
| TAAGGTGGCGACTGGGGGAG+AGG | + | tig0024162:6998-7017 | Msa1414970:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0024162 | gene | 4967 | 8548 | 4967 | ID=Msa1414970;Name=Msa1414970 |
| tig0024162 | mRNA | 4967 | 8548 | 4967 | ID=Msa1414970-mRNA-1;Parent=Msa1414970;Name=Msa1414970-mRNA-1;_AED=0.02;_eAED=0.02;_QI=290|1|1|1|0.75|0.6|5|244|444 |
| tig0024162 | exon | 4967 | 5132 | 4967 | ID=Msa1414970-mRNA-1:exon:22110;Parent=Msa1414970-mRNA-1 |
| tig0024162 | exon | 5301 | 5984 | 5301 | ID=Msa1414970-mRNA-1:exon:22111;Parent=Msa1414970-mRNA-1 |
| tig0024162 | exon | 6935 | 7259 | 6935 | ID=Msa1414970-mRNA-1:exon:22112;Parent=Msa1414970-mRNA-1 |
| tig0024162 | exon | 7761 | 7913 | 7761 | ID=Msa1414970-mRNA-1:exon:22113;Parent=Msa1414970-mRNA-1 |
| tig0024162 | exon | 8008 | 8548 | 8008 | ID=Msa1414970-mRNA-1:exon:22114;Parent=Msa1414970-mRNA-1 |
| tig0024162 | five_prime_UTR | 4967 | 5132 | 4967 | ID=Msa1414970-mRNA-1:five_prime_utr;Parent=Msa1414970-mRNA-1 |
| tig0024162 | five_prime_UTR | 5301 | 5424 | 5301 | ID=Msa1414970-mRNA-1:five_prime_utr;Parent=Msa1414970-mRNA-1 |
| tig0024162 | CDS | 5425 | 5984 | 5425 | ID=Msa1414970-mRNA-1:cds;Parent=Msa1414970-mRNA-1 |
| tig0024162 | CDS | 6935 | 7259 | 6935 | ID=Msa1414970-mRNA-1:cds;Parent=Msa1414970-mRNA-1 |
| tig0024162 | CDS | 7761 | 7913 | 7761 | ID=Msa1414970-mRNA-1:cds;Parent=Msa1414970-mRNA-1 |
| tig0024162 | CDS | 8008 | 8304 | 8008 | ID=Msa1414970-mRNA-1:cds;Parent=Msa1414970-mRNA-1 |
| tig0024162 | three_prime_UTR | 8305 | 8548 | 8305 | ID=Msa1414970-mRNA-1:three_prime_utr;Parent=Msa1414970-mRNA-1 |
| Gene Sequence |
| Protein sequence |
