Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906300 | BBN70545.1 | 38.131 | 535 | 192 | 15 | 1141 | 1557 | 877 | 1390 | 1.90e-76 | 294 |
| Msa0906300 | BBN70545.1 | 45.377 | 941 | 359 | 14 | 1218 | 2012 | 16 | 947 | 0.0 | 768 |
| Msa0906300 | BBN70545.1 | 46.649 | 746 | 296 | 10 | 1352 | 2017 | 687 | 1410 | 0.0 | 647 |
| Msa0906300 | BBN70545.1 | 49.530 | 957 | 362 | 17 | 8 | 874 | 480 | 1405 | 0.0 | 875 |
| Msa0906300 | BBN70545.1 | 49.559 | 1247 | 473 | 19 | 11 | 1113 | 14 | 1248 | 0.0 | 1150 |
| Msa0906300 | BBN70545.1 | 51.271 | 236 | 87 | 7 | 1125 | 1350 | 406 | 623 | 2.17e-49 | 207 |
| Msa0906300 | BBN70545.1 | 54.217 | 83 | 33 | 1 | 1129 | 1211 | 1328 | 1405 | 1.86e-13 | 89.7 |
| Msa0906300 | BBN70545.1 | 56.371 | 463 | 186 | 3 | 1550 | 1996 | 10 | 472 | 1.34e-153 | 524 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906300 | sp|F8WKW1|UGT2_GARJA | 59.236 | 471 | 178 | 3 | 1558 | 2015 | 12 | 481 | 0.0 | 577 |
| Msa0906300 | sp|F8WKW1|UGT2_GARJA | 56.317 | 467 | 169 | 6 | 440 | 872 | 11 | 476 | 5.86e-167 | 522 |
| Msa0906300 | sp|F8WKW1|UGT2_GARJA | 56.716 | 469 | 158 | 6 | 13 | 437 | 9 | 476 | 1.43e-166 | 521 |
| Msa0906300 | sp|F8WKW1|UGT2_GARJA | 40.133 | 451 | 152 | 11 | 1218 | 1552 | 9 | 457 | 5.86e-83 | 285 |
| Msa0906300 | sp|F8WKW1|UGT2_GARJA | 41.781 | 292 | 112 | 2 | 880 | 1113 | 8 | 299 | 1.84e-65 | 234 |
| Msa0906300 | sp|F8WKW1|UGT2_GARJA | 52.326 | 86 | 36 | 2 | 1125 | 1209 | 395 | 476 | 2.15e-15 | 85.1 |
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa0906300 | 0.816281 | 5.995587e-52 | -8.615850e-47 |
| Msa0006820 | Msa0906300 | 0.824849 | 6.459850e-54 | -8.615850e-47 |
| Msa0008850 | Msa0906300 | 0.817358 | 3.437088e-52 | -8.615850e-47 |
| Msa0012460 | Msa0906300 | 0.807735 | 4.370577e-50 | -8.615850e-47 |
| Msa0017120 | Msa0906300 | 0.846271 | 2.412457e-59 | -8.615850e-47 |
| Msa0030000 | Msa0906300 | 0.808364 | 3.212157e-50 | -8.615850e-47 |
| Msa0035090 | Msa0906300 | 0.804588 | 2.010305e-49 | -8.615850e-47 |
| Msa0042220 | Msa0906300 | 0.805207 | 1.492433e-49 | -8.615850e-47 |
| Msa0042250 | Msa0906300 | 0.808097 | 3.661780e-50 | -8.615850e-47 |
| Msa0047470 | Msa0906300 | 0.817274 | 3.589913e-52 | -8.615850e-47 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906300 | MtrunA17_Chr6g0454211 | 66.385 | 827 | 143 | 9 | 122 | 874 | 1 | 766 | 0.0 | 1047 |
| Msa0906300 | MtrunA17_Chr6g0454211 | 74.008 | 731 | 94 | 7 | 1350 | 2019 | 78 | 773 | 0.0 | 1031 |
| Msa0906300 | MtrunA17_Chr6g0454211 | 76.772 | 508 | 48 | 5 | 1 | 438 | 258 | 765 | 0.0 | 739 |
| Msa0906300 | MtrunA17_Chr6g0454211 | 53.675 | 762 | 188 | 14 | 952 | 1558 | 1 | 752 | 0.0 | 702 |
| Msa0906300 | MtrunA17_Chr6g0454211 | 48.946 | 664 | 164 | 7 | 549 | 1113 | 1 | 588 | 2.88e-177 | 558 |
| Msa0906300 | MtrunA17_Chr6g0454211 | 51.862 | 349 | 86 | 3 | 1664 | 2012 | 1 | 267 | 3.80e-98 | 335 |
| Msa0906300 | MtrunA17_Chr6g0454211 | 75.676 | 74 | 18 | 0 | 1138 | 1211 | 693 | 766 | 1.61e-27 | 121 |
| Msa0906300 | MtrunA17_Chr6g0454301 | 67.077 | 732 | 148 | 9 | 233 | 874 | 2 | 730 | 0.0 | 967 |
| Msa0906300 | MtrunA17_Chr6g0454301 | 61.924 | 738 | 161 | 8 | 1393 | 2015 | 1 | 733 | 0.0 | 890 |
| Msa0906300 | MtrunA17_Chr6g0454301 | 68.465 | 482 | 103 | 6 | 3 | 438 | 251 | 729 | 0.0 | 652 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0906300 | AT1G22340.1 | 52.008 | 473 | 208 | 5 | 1559 | 2015 | 15 | 484 | 1.95e-167 | 521 |
| Msa0906300 | AT1G22340.1 | 49.053 | 475 | 202 | 6 | 437 | 874 | 10 | 481 | 1.35e-153 | 483 |
| Msa0906300 | AT1G22340.1 | 50.212 | 472 | 185 | 8 | 12 | 436 | 10 | 478 | 3.04e-149 | 471 |
| Msa0906300 | AT1G22340.1 | 36.383 | 481 | 176 | 12 | 1218 | 1580 | 11 | 479 | 2.11e-79 | 272 |
| Msa0906300 | AT1G22340.1 | 39.726 | 292 | 118 | 3 | 880 | 1113 | 10 | 301 | 6.38e-61 | 218 |
| Msa0906300 | AT1G22340.1 | 50.667 | 75 | 36 | 1 | 1138 | 1211 | 407 | 481 | 1.41e-14 | 79.3 |
| Msa0906300 | AT1G22380.1 | 51.586 | 473 | 211 | 5 | 1559 | 2016 | 15 | 484 | 1.45e-166 | 519 |
| Msa0906300 | AT1G22380.1 | 48.734 | 474 | 204 | 7 | 437 | 874 | 10 | 480 | 7.96e-150 | 473 |
| Msa0906300 | AT1G22380.1 | 48.312 | 474 | 196 | 7 | 11 | 438 | 9 | 479 | 7.67e-146 | 462 |
| Msa0906300 | AT1G22380.1 | 37.773 | 458 | 165 | 9 | 1216 | 1556 | 9 | 463 | 1.19e-83 | 284 |
Find 443 sgRNAs with CRISPR-Local
Find 1907 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAACTATTAGAGTTTGCTT+GGG | 0.398810 | 6_2:-4893972 | Msa0906300:intron |
| AAAACTGTTAGAGTTTGCAT+GGG | 0.546319 | 6_2:-4870672 | Msa0906300:CDS |
| AAAACTGTTAGAGTTTGCAT+GGG | 0.546319 | 6_2:-4889498 | Msa0906300:CDS |
| AAAAGAAGCTAATGGACCAA+TGG | 0.589223 | 6_2:+4874771 | None:intergenic |
| AAAAGAAGCTAATGGACCAA+TGG | 0.589223 | 6_2:+4879145 | None:intergenic |
| AAAATCAATGAAACCATCAA+AGG | 0.607211 | 6_2:+4871556 | None:intergenic |
| AAAATCAGGGAAACCATCGA+AGG | 0.675397 | 6_2:+4894862 | None:intergenic |
| AAAATCAGTGAAACCATCAA+GGG | 0.645230 | 6_2:+4890391 | None:intergenic |
| AAACCATGCAAGTAACTGGA+GGG | 0.666424 | 6_2:+4894681 | None:intergenic |
| AAACGCTTGCTCAAATCAAG+AGG | 0.611360 | 6_2:-4890422 | Msa0906300:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| GCAAGAGTTCCTAAATTAAA+TGG | - | chr6_2:4870310-4870329 | Msa0906300:CDS | 30.0% | |
| CCCTACTTTACATATTAAAG+TGG | + | chr6_2:4870400-4870419 | None:intergenic | 30.0% | |
| GTGAAAATTTGGACTGATTA+AGG | - | chr6_2:4870780-4870799 | Msa0906300:CDS | 30.0% | |
| TCTAAGAAATAACCCATTTG+GGG | + | chr6_2:4871424-4871443 | None:intergenic | 30.0% | |
| TACACTTTATCTAGTGATCA+AGG | + | chr6_2:4871570-4871589 | None:intergenic | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr6_2:4871809-4871828 | Msa0906300:intron | 30.0% | |
| CAATCTGTTCTCATTAGTAA+TGG | + | chr6_2:4872011-4872030 | None:intergenic | 30.0% | |
| CAAACTGTTCTCATTAGTAA+TGG | + | chr6_2:4872069-4872088 | None:intergenic | 30.0% | |
| AACCTAAAAGATAAACAGAC+AGG | - | chr6_2:4872227-4872246 | Msa0906300:intron | 30.0% | |
| ATGCTGAAATATTAAAAGGC+GGG | - | chr6_2:4872440-4872459 | Msa0906300:intron | 30.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 4870172 | 4900675 | 4870172 | ID=Msa0906300;Name=Msa0906300 |
| chr6_2 | mRNA | 4870172 | 4900675 | 4870172 | ID=Msa0906300-mRNA-1;Parent=Msa0906300;Name=Msa0906300-mRNA-1;_AED=0.29;_eAED=0.30;_QI=0|0|0|1|0.14|0.07|28|0|2019 |
| chr6_2 | exon | 4900647 | 4900675 | 4900647 | ID=Msa0906300-mRNA-1:exon:1466;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4894811 | 4895045 | 4894811 | ID=Msa0906300-mRNA-1:exon:1465;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4894537 | 4894768 | 4894537 | ID=Msa0906300-mRNA-1:exon:1464;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4894288 | 4894409 | 4894288 | ID=Msa0906300-mRNA-1:exon:1463;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4894009 | 4894257 | 4894009 | ID=Msa0906300-mRNA-1:exon:1462;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4893754 | 4893981 | 4893754 | ID=Msa0906300-mRNA-1:exon:1461;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4893499 | 4893717 | 4893499 | ID=Msa0906300-mRNA-1:exon:1460;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4890334 | 4890564 | 4890334 | ID=Msa0906300-mRNA-1:exon:1459;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4890060 | 4890291 | 4890060 | ID=Msa0906300-mRNA-1:exon:1458;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4889707 | 4889935 | 4889707 | ID=Msa0906300-mRNA-1:exon:1457;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4889408 | 4889655 | 4889408 | ID=Msa0906300-mRNA-1:exon:1456;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4889184 | 4889395 | 4889184 | ID=Msa0906300-mRNA-1:exon:1455;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4889025 | 4889177 | 4889025 | ID=Msa0906300-mRNA-1:exon:1454;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4884027 | 4884246 | 4884027 | ID=Msa0906300-mRNA-1:exon:1453;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4879741 | 4879887 | 4879741 | ID=Msa0906300-mRNA-1:exon:1452;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4879241 | 4879413 | 4879241 | ID=Msa0906300-mRNA-1:exon:1451;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4879034 | 4879213 | 4879034 | ID=Msa0906300-mRNA-1:exon:1450;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4878948 | 4879019 | 4878948 | ID=Msa0906300-mRNA-1:exon:1449;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4877037 | 4877255 | 4877037 | ID=Msa0906300-mRNA-1:exon:1448;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4875662 | 4875881 | 4875662 | ID=Msa0906300-mRNA-1:exon:1447;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4875447 | 4875643 | 4875447 | ID=Msa0906300-mRNA-1:exon:1446;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4874735 | 4874941 | 4874735 | ID=Msa0906300-mRNA-1:exon:1445;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4874660 | 4874715 | 4874660 | ID=Msa0906300-mRNA-1:exon:1444;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4874462 | 4874645 | 4874462 | ID=Msa0906300-mRNA-1:exon:1443;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4874167 | 4874347 | 4874167 | ID=Msa0906300-mRNA-1:exon:1442;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4871505 | 4871719 | 4871505 | ID=Msa0906300-mRNA-1:exon:1441;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4871231 | 4871462 | 4871231 | ID=Msa0906300-mRNA-1:exon:1440;Parent=Msa0906300-mRNA-1 |
| chr6_2 | exon | 4870172 | 4871109 | 4870172 | ID=Msa0906300-mRNA-1:exon:1439;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4900647 | 4900675 | 4900647 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4894811 | 4895045 | 4894811 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4894537 | 4894768 | 4894537 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4894288 | 4894409 | 4894288 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4894009 | 4894257 | 4894009 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4893754 | 4893981 | 4893754 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4893499 | 4893717 | 4893499 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4890334 | 4890564 | 4890334 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4890060 | 4890291 | 4890060 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4889707 | 4889935 | 4889707 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4889408 | 4889655 | 4889408 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4889184 | 4889395 | 4889184 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4889025 | 4889177 | 4889025 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4884027 | 4884246 | 4884027 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4879741 | 4879887 | 4879741 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4879241 | 4879413 | 4879241 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4879034 | 4879213 | 4879034 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4878948 | 4879019 | 4878948 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4877037 | 4877255 | 4877037 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4875662 | 4875881 | 4875662 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4875447 | 4875643 | 4875447 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4874735 | 4874941 | 4874735 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4874660 | 4874715 | 4874660 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4874462 | 4874645 | 4874462 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4874167 | 4874347 | 4874167 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4871505 | 4871719 | 4871505 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4871231 | 4871462 | 4871231 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| chr6_2 | CDS | 4870172 | 4871109 | 4870172 | ID=Msa0906300-mRNA-1:cds;Parent=Msa0906300-mRNA-1 |
| Gene Sequence |
>Msa0906300 ATGAACTTGGACAAATTGATCAAGGAGGTTGATTCAAAACCTCATGCTGTGTTAATCCCATGTCCAGTTCAAGGCCATATCAATCCATTGTTGAAACTAGCAAAACTTCTTCACCTTAGAGGATTTCACATAACCTTTGTTAACACTGAATACAATCACAAACGTTTGTTCAAATCAAGAGGTGAAAATGCCTTCGATGGTTTCCCTGATTTTAGCTTTCAGACTATTCCAGATGGTTTAACTCCAACGGATGGTGATGGCGATAACTTCCTACAACCTTTCCGTGAACTTCTTGCTAGACTTAATGACTCTGCAACATCTGGTCTTGTCCCTCCAGTTACTTGCATGGTTTCTGATATTAGCATGTCTTTTACTATACAAGCTGCTGAAGAACTTTCAATCCCAGTTGTTTTGTTTAGTCCAGCCAATGCATGTACATTTTTGACTTTTAATCATTTTAGTACATTGTTGGATAAAGGTCTCATACCACTAAAAGATGAGAGTTATCTGACAAACGGATATTTGGACACTAAAGTGGACTGTATTCCAGGATTGCAGAACTTTCGACTGAAGGATTTGCCTGACTTTATAAGGATTACTGATCCAAATGATTCGATCGTTCACAGAGACTCTACTTTTATTTTTAATACTTCTGATGAACTTGAGAAGGATGTAATCAATGTTCTCTCCACTACGTTCCCTTCTACTTATGCCATTGGCCCTTTATCATCATTTTTAAATCAAAGTCCACAAAACCACTTAGCATCTTTAAGTACAAATCTTTGGAAAGAAGATACCAAGTGTCTTGATTGGCTTGAATCAAAGGAACCGAGGTCTGTTGTTTATGTGAATTTTGGGAGCTCAACATTTGCTTGGGGTTTGGCCAATAGCAAGCAACATTTTTTATGGATCCTTAGGCCTGATCTTGTCATTGGCGGTTCCATGGTTTTGTCATCTGAGTTTAAGAATGAAATTTCAGATAGAGGCCTAATCGCGGGTTGGTGCCCACAAGAGCAAGTATTGAACCATCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACAACTGAAAGCATATGTGCTGGAACAACAAACTGTAGATTTATTTGCAATGAATGGGAGATTGGAATGGAAATTGACGCCAATGTGAAGAGAGATGAGGTGGAGAAGTTGGTCAATGAATTGATGGTGGGAGAGAAAGGAAAGAAGATGAGGAAAAAGATAATTGAGATGAAGAAGAAGGCCGAGGAGGACACGAGACCTGGTGGTTGTTCATACATGAACTTGGAAAAAGTGATTAAGGAGCCACATGCAGTGTTGATTCCATATCCACTTCAAGGACATATCACTCCATTAATAACACTAGCTAAGCTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTCAACACCGAATACAATCACAAACGCTTGCTCAAATCAAGAGGTCCAAAAGCCCTTGATGGTTTCACTGATTTTACCTTTGAGACTATACCAGATGGTCTTACTCCAGTTGATGGTGATGGTGATGGCGATAACTTCCTACAACCGTTTCGCGAACTTCTTGCTAGACTTAATGACTCTGCCACTTCTGGTCTTGTCCCTCCAGTTACTTGCATAGTTTCTGATAATAGCATGTATTTTACTATACAAGCTGCAGAAGAACTTTCAATCCCTGTTGTTTTCTTTAGTCCAGCCAGTGCATGTATGTTTTTGACTGGTTTTCACTTACCTACACTGTTTGACAAAGGTGTCATACCACTAAAAGATGAGAGTTATCTCACAAACGGATATTTGGACACTAAAGTAGATTGTATTCCAGGACTGAACAACTTCCGAATCAAGGATCTGCCGGACTTTGTAAGAGCTAAATATCCAAATGATTCCATGGTAGAATTTATCCTTGAAGCGTCTGGAAGGGCTCACCGACCCTCTGCATTTATTTTAAACACTTCTAGTGAACTTGAGAAGGATGTAATGAATGCTCTCTCCACTGTTCCAGAAAACCATTTGACATCTTTAAGCACCAATCTTTGGAAAGAAGATACCAAGTGTCTTGATTGGCTTGAATCCAAGGAACCGAGGTCTGTTGTTTACGTGAATTTTGGAAGCTTGACAGTTATGAATGCAGAAAAACTGTTAGAGTTTGCATGGGGTTTAGCAAATAGCAAGCAACCCTTTTTGTGGATCATTAGGCCCGATCTTGTCATTGGCGGCTCAGTTGTTTTTTCATCGGAGTTTGTGAATAGAGGCCTAATAACAAGCTGGTGTCCGCAAGAGAAAGTACTGAACCACCGATCAATTGGTGGATTCTTATCTCATTGTGGATGGAACTCAACCACTGAAAGCATATCTGCTGGAGTGCCAATGTTGTGTTGGCCATTTTTCGCAGATCACCCAGTAAGCTGCAGATATATATGCAATACATGGGAAATTGGAATTGAAATCGATACTAATAGAGAGGAGGTGGAGAAGCTGGTTAATGAATTGATGGTGGGAGAGAAAGCAAAGAAGATGAGGCAAAAGGCCACGGAGTTGAAGAAGAAGGTGGAGGAGGACACGAGACCTAGAGGCTGTTCATACATGAACTTGGAGAAAGTGATTAAGGAGATGACTAACTTTGAAGAGAAAAAGCCACATGCAGTGTTAACTCCATTTCCGGTTCAAGGCCATATCAATGCATTGTTGAAACTAGCAAAGCTTCTTCACCTTAGAGGCTTTCACATAACCTTTGTCAACATTGAATACAATCACAAACGTTTGCTCAAATCAAGAGGTGAAAATGCCTTTGATGGTTTCACTGACTTTACCTTTGAGACTATACCAGATGTTTCTGATTGCTATATGCCATTTACAGTAGATGCTGCTGAAGAGCATGCACTCCCAATTGTTCTATTTTGTCCAGCTAGTGCATGTTATTTCTTGGCTTGTTTACACAGTCCTAAAATGTATCTGAATAGTCAACTACCATTCAAAGATGGGAGTGATCTAACAAATGAATATTTGGACACTAAAGTTGAATGGATTCCAGGTTTGAAAAACTTCAGATTGAAGGATCTTCCTAGGTTAATAAAGACAAAAAATCCTAATGACTTGATGATAAGATTTGGCACTGAAGTGGCAGATAAATGTCAAAGAGCCTCTGGTATTAGTGATGTTATGAATGCTTTCTATTCTATGTTCCCATCTCTATACACCATTGGTCCATTAGCTTCTTTTGTAAATCAAAGTCCACAAAATCATTTGACATCTTTAAATTCTAATCTTTGGAAAGAAGATACTAAATGTCTTGAATGGCTTGAATCAAAGGAACCAGGATCTGTTCTTTATCATCACTGTTATGTCTTGAGAGAAGCTCGTAGAGTTTGCTTGGGGTTTGGCCAACAGCAAGAAACCCTTTTTCCAGCAAACTGCAGATATATTTGCAATGAATGGGAGATTGGAAACGAAATCGATACCAATGTAAAGAGGGAGGAGGTGGAGAAACTGGTCAAAGAATTGATGTCGGGAGATAAAGGAAAGAAGATGAGGCAAAAGGCCATGGAGCTGAAGAAGAAGGCGGAGGTGCACATGAAACCTGGAGGTTGTTCATACATGAACTTGGAGAAAGTGATTAAGGAGATGAGTAACTTTCAAGAGATAAAGCCACATGCAGTGTTAACTCCATTTCCAGCTCAAGGCCATATCAATGCATTGTTGAAACTAGGAAAACTACTTCACCTTAGAGGCTTTCACATAACCTTTGTCAACACTGAATACAATCACAATCGCTTGCTAAAATCAAGAGGTCCAAATGCCTTTGATGGTTTCACCGACTTTAACTTTGAGACCATTCCTGATGGCGATGGTGATGTTATTCAAGACCTACGCTCTCTTGGTGAATCAATCTTGACGAACTTTCTCCACTTCTTTGATAAACTTCTTGCTAAACTTCAAGACTCTGCGACTGCTGGTCTTATCCCTCCAGTTACTTGCTTAGTTTCTGATTGTTACATGCCATTTACAGTAGATGCTGCTGAAGAACATGCCCTCCCAATTGTAAAAGATCCTGATCACTTGCTGATAAAATATACAAATGAAGTGACAGATAAATGTCAAAGAGCCTCTGCTTTTGTTTTGAATACTACTAATGATCTTGAGAGTGATGTTGTGAATGCTTTCTATTCTATATTTCCATCTCTATACACCATTGGTCCATTAGCTTCTTTTGTAAATCAAAGTCCACAAAATCACTTGACATCTTTCAAGATACTAAATGTCTTGAATGGCTTGAATCAAAAGAAGCAGGATCTGTTGTTTATTATCACTGTTATGTCTCGAGAGAAGCTCTTAGAGTTTGCTTGGGGTTTGGCAAATAGCAAGAAACCTTTTTTGTGGATCATTAGGCCGGATCTTGTCATTGGTGGCTCAGTGGTTTTCTCATCTGATTTTTTGAAAAAAATTTCAGATAGAGGACTAATAGCAAGTTGGTGTCCACAAGAGAAACCAGCAAACTGCAGATATATTTGCAATGAATGGGAGATTGGAAATGAAATCGATACGAATGTAAAGAGGGAGGAGGTGGAGAAACTGGTCAATGAATTGATCTCCGGAGATAAAGGAAAGAAGATGAGGCAAAAGGCCATGGAGCTGAAGAAAAAGGCGGAGGTAGACACAAGACCTGGAGTGTTAATTCCATATCCAGTTCAAGGCCATATCAATCCATTGCTGCAACTAGCAAAGCTTCTTCACCTTAGAGGTTTGCACATAACCTATGTAAACACTGAATACAATCACAAACGGTTGCTCAAGTCAAGAGGCCCAAATGCCTTTGATGGTTTCATTGATTTTAGCTTTCAGAGCATTCCAGATGGTTTAACTCCAATGGATGGTGATGGCGATAACTTCCTACAACCTTTCCGCGAACTTCTTGCTAGACTTAATGACTCTGCAACATCTGGTCTTGTCCCTCCAGTTACTTGCATAGTTTCTGATATTAGCATGTCTTTTACCATACAAGCTGCTGAAGAACTTTCAATCCCTAATATTTTCTTTAGTCCATCCAATGCATGTACATTTTTGACTTTTATTCATTTTAGTACATTGTTGGATAAAGGTCTCATACCACTAAAAGATGAGAGTTATCTGACAAACGGATATTTGGACACTAAAGTGGACTGTATTCCAGGATTGCAGACCTTTCGACTGAAGGATCTGCCTGACTTTATAAGGATTACAGATACAAATGATTCGATGGTAGAATTTATCATTGAAGCAGCAGGAAGGGCTCACAAAGCCTCTGCTTTTATTTTTAATACTTCTAATGAACTTGAGAAGGATGTAATGAATGTTCTCTCCTCGACGTTCCCTAACATTTGTGCTATTGGCCCTTTTTCTTCACTTTTAAGTCAAAGTCCACAGAATCAATTGTCAAGTTTAAATACCAATCTCTGGAAAGAAGATACCAAGTGTCTTAATTGGCTTGAATCCAAGGAAGCGAAGTCCGTTGTTTATGTGAATTTTGGGAGCATGACAGTTATGACTTCAGAAAAACTGTTAGAGTTTGCATGGGGTTTAGCAAATAGCAAGCAACCCTTTTTGTGGATCATTAGGCCCGATCTTGTCATTGGTGGCTCCGTTGTTTTGTCATCGGAGTTTGTGGATGAAATTTCAGATAGAGGCCTAATCGCGGGATGGTGCCCACAAGAGCAAGTATTAAACCATCCTTCAATTGGTGGATTCTTGACTCATTGTGGATGGAACTCAACCACTGAAAGCATATCTGCTGGAGTTCCAATGTTGTGTTGGCCATTTTTTGCTGATCAGCCAGCAAACTGTCGATATATTTGCAATACATGGGAGATTGGAATCGAAATCGATACTAATGTGAAGAGAGAGGAGGTGGAGAATTTGGTCAATGAATTGATGGTGGGAGAGAAAGGAAAGAAGATGAGGAAAAAGATAATTGAGATGAAGAAGAAGGCCGACGAAGACACGAGACCTGGTGGTTGTTCATACATGAACTTGGAAAAAGTGATTAAGGAGGTTTTGCTTAAACAAAATCAAACCTAA |
| Protein sequence |
>Msa0906300 MNLDKLIKEVDSKPHAVLIPCPVQGHINPLLKLAKLLHLRGFHITFVNTEYNHKRLFKSRGENAFDGFPDFSFQTIPDGLTPTDGDGDNFLQPFRELLARLNDSATSGLVPPVTCMVSDISMSFTIQAAEELSIPVVLFSPANACTFLTFNHFSTLLDKGLIPLKDESYLTNGYLDTKVDCIPGLQNFRLKDLPDFIRITDPNDSIVHRDSTFIFNTSDELEKDVINVLSTTFPSTYAIGPLSSFLNQSPQNHLASLSTNLWKEDTKCLDWLESKEPRSVVYVNFGSSTFAWGLANSKQHFLWILRPDLVIGGSMVLSSEFKNEISDRGLIAGWCPQEQVLNHPSIGGFLTHCGWNSTTESICAGTTNCRFICNEWEIGMEIDANVKRDEVEKLVNELMVGEKGKKMRKKIIEMKKKAEEDTRPGGCSYMNLEKVIKEPHAVLIPYPLQGHITPLITLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKALDGFTDFTFETIPDGLTPVDGDGDGDNFLQPFRELLARLNDSATSGLVPPVTCIVSDNSMYFTIQAAEELSIPVVFFSPASACMFLTGFHLPTLFDKGVIPLKDESYLTNGYLDTKVDCIPGLNNFRIKDLPDFVRAKYPNDSMVEFILEASGRAHRPSAFILNTSSELEKDVMNALSTVPENHLTSLSTNLWKEDTKCLDWLESKEPRSVVYVNFGSLTVMNAEKLLEFAWGLANSKQPFLWIIRPDLVIGGSVVFSSEFVNRGLITSWCPQEKVLNHRSIGGFLSHCGWNSTTESISAGVPMLCWPFFADHPVSCRYICNTWEIGIEIDTNREEVEKLVNELMVGEKAKKMRQKATELKKKVEEDTRPRGCSYMNLEKVIKEMTNFEEKKPHAVLTPFPVQGHINALLKLAKLLHLRGFHITFVNIEYNHKRLLKSRGENAFDGFTDFTFETIPDVSDCYMPFTVDAAEEHALPIVLFCPASACYFLACLHSPKMYLNSQLPFKDGSDLTNEYLDTKVEWIPGLKNFRLKDLPRLIKTKNPNDLMIRFGTEVADKCQRASGISDVMNAFYSMFPSLYTIGPLASFVNQSPQNHLTSLNSNLWKEDTKCLEWLESKEPGSVLYHHCYVLREARRVCLGFGQQQETLFPANCRYICNEWEIGNEIDTNVKREEVEKLVKELMSGDKGKKMRQKAMELKKKAEVHMKPGGCSYMNLEKVIKEMSNFQEIKPHAVLTPFPAQGHINALLKLGKLLHLRGFHITFVNTEYNHNRLLKSRGPNAFDGFTDFNFETIPDGDGDVIQDLRSLGESILTNFLHFFDKLLAKLQDSATAGLIPPVTCLVSDCYMPFTVDAAEEHALPIVKDPDHLLIKYTNEVTDKCQRASAFVLNTTNDLESDVVNAFYSIFPSLYTIGPLASFVNQSPQNHLTSFKILNVLNGLNQKKQDLLFIITVMSREKLLEFAWGLANSKKPFLWIIRPDLVIGGSVVFSSDFLKKISDRGLIASWCPQEKPANCRYICNEWEIGNEIDTNVKREEVEKLVNELISGDKGKKMRQKAMELKKKAEVDTRPGVLIPYPVQGHINPLLQLAKLLHLRGLHITYVNTEYNHKRLLKSRGPNAFDGFIDFSFQSIPDGLTPMDGDGDNFLQPFRELLARLNDSATSGLVPPVTCIVSDISMSFTIQAAEELSIPNIFFSPSNACTFLTFIHFSTLLDKGLIPLKDESYLTNGYLDTKVDCIPGLQTFRLKDLPDFIRITDTNDSMVEFIIEAAGRAHKASAFIFNTSNELEKDVMNVLSSTFPNICAIGPFSSLLSQSPQNQLSSLNTNLWKEDTKCLNWLESKEAKSVVYVNFGSMTVMTSEKLLEFAWGLANSKQPFLWIIRPDLVIGGSVVLSSEFVDEISDRGLIAGWCPQEQVLNHPSIGGFLTHCGWNSTTESISAGVPMLCWPFFADQPANCRYICNTWEIGIEIDTNVKREEVENLVNELMVGEKGKKMRKKIIEMKKKADEDTRPGGCSYMNLEKVIKEVLLKQNQT* |
