Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446830 | sp|Q6YWP9|ORRM1_ORYSJ | 43.836 | 73 | 40 | 1 | 8 | 80 | 296 | 367 | 1.35e-13 | 68.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446830 | G7IHN0 | 86.250 | 80 | 9 | 1 | 1 | 80 | 1 | 78 | 6.37e-41 | 139 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa1446830 | 0.816127 | 6.489173e-52 | -8.615850e-47 |
| Msa0003700 | Msa1446830 | 0.817183 | 3.763960e-52 | -8.615850e-47 |
| Msa0016670 | Msa1446830 | 0.810569 | 1.079952e-50 | -8.615850e-47 |
| Msa0017510 | Msa1446830 | 0.851317 | 9.603109e-61 | -8.615850e-47 |
| Msa0028420 | Msa1446830 | 0.807487 | 4.934562e-50 | -8.615850e-47 |
| Msa0028640 | Msa1446830 | 0.819078 | 1.402771e-52 | -8.615850e-47 |
| Msa0031340 | Msa1446830 | 0.814622 | 1.403035e-51 | -8.615850e-47 |
| Msa0032090 | Msa1446830 | 0.802905 | 4.493189e-49 | -8.615850e-47 |
| Msa0032430 | Msa1446830 | 0.807655 | 4.546452e-50 | -8.615850e-47 |
| Msa0032920 | Msa1446830 | -0.805060 | 1.601947e-49 | -8.615850e-47 |
| Msa0040450 | Msa1446830 | 0.820445 | 6.834235e-53 | -8.615850e-47 |
| Msa0046100 | Msa1446830 | 0.817371 | 3.413859e-52 | -8.615850e-47 |
| Msa0047050 | Msa1446830 | 0.804949 | 1.689833e-49 | -8.615850e-47 |
| Msa0053780 | Msa1446830 | 0.803481 | 3.415646e-49 | -8.615850e-47 |
| Msa0061340 | Msa1446830 | 0.801188 | 1.013241e-48 | -8.615850e-47 |
| Msa0068680 | Msa1446830 | 0.809703 | 1.659710e-50 | -8.615850e-47 |
| Msa0072900 | Msa1446830 | 0.818181 | 2.241542e-52 | -8.615850e-47 |
| Msa0075220 | Msa1446830 | 0.806231 | 9.094748e-50 | -8.615850e-47 |
| Msa0076000 | Msa1446830 | 0.807355 | 5.264534e-50 | -8.615850e-47 |
| Msa0076250 | Msa1446830 | 0.819447 | 1.156073e-52 | -8.615850e-47 |
| Msa0078650 | Msa1446830 | 0.806000 | 1.017310e-49 | -8.615850e-47 |
| Msa0079380 | Msa1446830 | 0.806772 | 6.994353e-50 | -8.615850e-47 |
| Msa0081360 | Msa1446830 | 0.818325 | 2.079580e-52 | -8.615850e-47 |
| Msa0081480 | Msa1446830 | 0.817768 | 2.778652e-52 | -8.615850e-47 |
| Msa0089630 | Msa1446830 | 0.827709 | 1.346889e-54 | -8.615850e-47 |
| Msa0094120 | Msa1446830 | 0.853376 | 2.489991e-61 | -8.615850e-47 |
| Msa0110970 | Msa1446830 | 0.840425 | 8.763169e-58 | -8.615850e-47 |
| Msa1346370 | Msa1446830 | 0.822591 | 2.183008e-53 | -8.615850e-47 |
| Msa1348880 | Msa1446830 | 0.804409 | 2.190837e-49 | -8.615850e-47 |
| Msa1353060 | Msa1446830 | 0.808618 | 2.834983e-50 | -8.615850e-47 |
| Msa1353980 | Msa1446830 | 0.803671 | 3.118218e-49 | -8.615850e-47 |
| Msa1366600 | Msa1446830 | 0.809344 | 1.982014e-50 | -8.615850e-47 |
| Msa1367080 | Msa1446830 | 0.800275 | 1.555510e-48 | -8.615850e-47 |
| Msa1370010 | Msa1446830 | 0.804963 | 1.678505e-49 | -8.615850e-47 |
| Msa1372760 | Msa1446830 | 0.816949 | 4.248351e-52 | -8.615850e-47 |
| Msa1374040 | Msa1446830 | 0.817849 | 2.663557e-52 | -8.615850e-47 |
| Msa1374120 | Msa1446830 | 0.812258 | 4.641563e-51 | -8.615850e-47 |
| Msa1374550 | Msa1446830 | 0.807095 | 5.974812e-50 | -8.615850e-47 |
| Msa1397810 | Msa1446830 | 0.803794 | 2.940621e-49 | -8.615850e-47 |
| Msa1409870 | Msa1446830 | 0.843864 | 1.077995e-58 | -8.615850e-47 |
| Msa1416150 | Msa1446830 | 0.805828 | 1.105513e-49 | -8.615850e-47 |
| Msa1417870 | Msa1446830 | 0.806769 | 7.004881e-50 | -8.615850e-47 |
| Msa1423350 | Msa1446830 | 0.804413 | 2.186359e-49 | -8.615850e-47 |
| Msa1427060 | Msa1446830 | 0.825180 | 5.395742e-54 | -8.615850e-47 |
| Msa1430240 | Msa1446830 | 0.809606 | 1.741104e-50 | -8.615850e-47 |
| Msa1446830 | Msa1451160 | 0.803597 | 3.230401e-49 | -8.615850e-47 |
| Msa1446830 | Msa1457910 | 0.800786 | 1.223753e-48 | -8.615850e-47 |
| Msa1446830 | Msa1459380 | 0.803635 | 3.173249e-49 | -8.615850e-47 |
| Msa1446830 | Msa1460020 | 0.843389 | 1.443654e-58 | -8.615850e-47 |
| Msa1446830 | Msa1461300 | 0.808537 | 2.949934e-50 | -8.615850e-47 |
| Msa1446830 | Msa1464810 | 0.808957 | 2.399287e-50 | -8.615850e-47 |
| Msa1446830 | Msa1466540 | 0.800292 | 1.543432e-48 | -8.615850e-47 |
| Msa0615440 | Msa1446830 | 0.810950 | 8.932527e-51 | -8.615850e-47 |
| Msa0616020 | Msa1446830 | 0.801412 | 9.113691e-49 | -8.615850e-47 |
| Msa0616160 | Msa1446830 | 0.800970 | 1.122508e-48 | -8.615850e-47 |
| Msa0616220 | Msa1446830 | 0.809929 | 1.483730e-50 | -8.615850e-47 |
| Msa0623700 | Msa1446830 | 0.800006 | 1.764290e-48 | -8.615850e-47 |
| Msa0625720 | Msa1446830 | 0.805524 | 1.280382e-49 | -8.615850e-47 |
| Msa0627450 | Msa1446830 | 0.805952 | 1.041214e-49 | -8.615850e-47 |
| Msa0638070 | Msa1446830 | 0.822795 | 1.957054e-53 | -8.615850e-47 |
| Msa0639430 | Msa1446830 | 0.817547 | 3.116848e-52 | -8.615850e-47 |
| Msa0643220 | Msa1446830 | 0.817191 | 3.747073e-52 | -8.615850e-47 |
| Msa0650020 | Msa1446830 | 0.833357 | 5.587882e-56 | -8.615850e-47 |
| Msa0657970 | Msa1446830 | 0.835968 | 1.232038e-56 | -8.615850e-47 |
| Msa0663390 | Msa1446830 | 0.804889 | 1.738876e-49 | -8.615850e-47 |
| Msa0674580 | Msa1446830 | 0.802070 | 6.679575e-49 | -8.615850e-47 |
| Msa0677410 | Msa1446830 | 0.827674 | 1.373341e-54 | -8.615850e-47 |
| Msa0682330 | Msa1446830 | 0.863775 | 1.956887e-64 | -8.615850e-47 |
| Msa0682900 | Msa1446830 | 0.806070 | 9.831384e-50 | -8.615850e-47 |
| Msa0683510 | Msa1446830 | 0.825602 | 4.285547e-54 | -8.615850e-47 |
| Msa0683570 | Msa1446830 | 0.802194 | 6.297349e-49 | -8.615850e-47 |
| Msa0684500 | Msa1446830 | 0.806221 | 9.140858e-50 | -8.615850e-47 |
| Msa0691980 | Msa1446830 | 0.811279 | 7.580580e-51 | -8.615850e-47 |
| Msa0692080 | Msa1446830 | 0.802954 | 4.389691e-49 | -8.615850e-47 |
| Msa0693380 | Msa1446830 | 0.821812 | 3.309437e-53 | -8.615850e-47 |
| Msa0698490 | Msa1446830 | 0.813509 | 2.469656e-51 | -8.615850e-47 |
| Msa0698660 | Msa1446830 | 0.817548 | 3.114316e-52 | -8.615850e-47 |
| Msa0698920 | Msa1446830 | 0.815576 | 8.613740e-52 | -8.615850e-47 |
| Msa0701280 | Msa1446830 | 0.805973 | 1.030605e-49 | -8.615850e-47 |
| Msa0703230 | Msa1446830 | 0.824263 | 8.875403e-54 | -8.615850e-47 |
| Msa0704600 | Msa1446830 | 0.808891 | 2.478304e-50 | -8.615850e-47 |
| Msa0708520 | Msa1446830 | 0.826962 | 2.034352e-54 | -8.615850e-47 |
| Msa0730430 | Msa1446830 | 0.810165 | 1.320195e-50 | -8.615850e-47 |
| Msa0731940 | Msa1446830 | 0.802336 | 5.887848e-49 | -8.615850e-47 |
| Msa0742380 | Msa1446830 | 0.808967 | 2.387354e-50 | -8.615850e-47 |
| Msa0744040 | Msa1446830 | 0.817212 | 3.707403e-52 | -8.615850e-47 |
| Msa0750880 | Msa1446830 | 0.804487 | 2.109707e-49 | -8.615850e-47 |
| Msa0760380 | Msa1446830 | 0.804509 | 2.088263e-49 | -8.615850e-47 |
| Msa0761940 | Msa1446830 | 0.802536 | 5.355106e-49 | -8.615850e-47 |
| Msa0778320 | Msa1446830 | 0.807538 | 4.812650e-50 | -8.615850e-47 |
| Msa0785210 | Msa1446830 | 0.803854 | 2.857915e-49 | -8.615850e-47 |
| Msa0796530 | Msa1446830 | 0.808062 | 3.724544e-50 | -8.615850e-47 |
| Msa0803890 | Msa1446830 | 0.816497 | 5.364443e-52 | -8.615850e-47 |
| Msa0808270 | Msa1446830 | 0.831711 | 1.429750e-55 | -8.615850e-47 |
| Msa0816710 | Msa1446830 | 0.824287 | 8.761356e-54 | -8.615850e-47 |
| Msa0824660 | Msa1446830 | 0.843064 | 1.762614e-58 | -8.615850e-47 |
| Msa0824680 | Msa1446830 | 0.808445 | 3.086872e-50 | -8.615850e-47 |
| Msa0828560 | Msa1446830 | 0.821239 | 4.487985e-53 | -8.615850e-47 |
| Msa0841940 | Msa1446830 | 0.801887 | 7.284653e-49 | -8.615850e-47 |
| Msa0124060 | Msa1446830 | 0.831385 | 1.720376e-55 | -8.615850e-47 |
| Msa0124340 | Msa1446830 | 0.828636 | 8.053801e-55 | -8.615850e-47 |
| Msa0126370 | Msa1446830 | 0.802265 | 6.089502e-49 | -8.615850e-47 |
| Msa0127050 | Msa1446830 | 0.807714 | 4.416853e-50 | -8.615850e-47 |
| Msa0136070 | Msa1446830 | 0.807712 | 4.420270e-50 | -8.615850e-47 |
| Msa0140570 | Msa1446830 | 0.809387 | 1.940131e-50 | -8.615850e-47 |
| Msa0146260 | Msa1446830 | 0.821374 | 4.177082e-53 | -8.615850e-47 |
| Msa0152400 | Msa1446830 | 0.804408 | 2.191953e-49 | -8.615850e-47 |
| Msa0157290 | Msa1446830 | 0.851730 | 7.337369e-61 | -8.615850e-47 |
| Msa0160130 | Msa1446830 | 0.801992 | 6.931237e-49 | -8.615850e-47 |
| Msa0168500 | Msa1446830 | 0.829130 | 6.115340e-55 | -8.615850e-47 |
| Msa0171290 | Msa1446830 | 0.809306 | 2.019757e-50 | -8.615850e-47 |
| Msa0172070 | Msa1446830 | 0.803057 | 4.180573e-49 | -8.615850e-47 |
| Msa0173990 | Msa1446830 | 0.800742 | 1.249801e-48 | -8.615850e-47 |
| Msa0182680 | Msa1446830 | 0.803236 | 3.838247e-49 | -8.615850e-47 |
| Msa0186890 | Msa1446830 | 0.821196 | 4.590390e-53 | -8.615850e-47 |
| Msa0197660 | Msa1446830 | 0.801200 | 1.007101e-48 | -8.615850e-47 |
| Msa0200260 | Msa1446830 | 0.809131 | 2.201863e-50 | -8.615850e-47 |
| Msa0211150 | Msa1446830 | 0.803245 | 3.821610e-49 | -8.615850e-47 |
| Msa0220580 | Msa1446830 | 0.804163 | 2.464140e-49 | -8.615850e-47 |
| Msa0220740 | Msa1446830 | 0.807242 | 5.562007e-50 | -8.615850e-47 |
| Msa0223690 | Msa1446830 | 0.808794 | 2.600287e-50 | -8.615850e-47 |
| Msa0225740 | Msa1446830 | 0.846643 | 1.908947e-59 | -8.615850e-47 |
| Msa0231650 | Msa1446830 | 0.800504 | 1.397063e-48 | -8.615850e-47 |
| Msa1229500 | Msa1446830 | 0.806944 | 6.432791e-50 | -8.615850e-47 |
| Msa1236100 | Msa1446830 | 0.810815 | 9.555838e-51 | -8.615850e-47 |
| Msa1238930 | Msa1446830 | 0.815276 | 1.004408e-51 | -8.615850e-47 |
| Msa1242230 | Msa1446830 | 0.803378 | 3.586624e-49 | -8.615850e-47 |
| Msa1242240 | Msa1446830 | 0.817651 | 2.952119e-52 | -8.615850e-47 |
| Msa1264020 | Msa1446830 | 0.818293 | 2.114269e-52 | -8.615850e-47 |
| Msa1271990 | Msa1446830 | 0.810617 | 1.054264e-50 | -8.615850e-47 |
| Msa1272900 | Msa1446830 | 0.805783 | 1.129893e-49 | -8.615850e-47 |
| Msa1276660 | Msa1446830 | 0.810377 | 1.188052e-50 | -8.615850e-47 |
| Msa1283840 | Msa1446830 | 0.824363 | 8.403904e-54 | -8.615850e-47 |
| Msa1283860 | Msa1446830 | 0.814266 | 1.681722e-51 | -8.615850e-47 |
| Msa1284260 | Msa1446830 | 0.812547 | 4.013700e-51 | -8.615850e-47 |
| Msa1284550 | Msa1446830 | 0.810816 | 9.549559e-51 | -8.615850e-47 |
| Msa1292830 | Msa1446830 | 0.812163 | 4.867983e-51 | -8.615850e-47 |
| Msa1303250 | Msa1446830 | 0.810439 | 1.152057e-50 | -8.615850e-47 |
| Msa1306840 | Msa1446830 | 0.811810 | 5.811531e-51 | -8.615850e-47 |
| Msa1306850 | Msa1446830 | 0.808960 | 2.395381e-50 | -8.615850e-47 |
| Msa1328710 | Msa1446830 | 0.814228 | 1.714127e-51 | -8.615850e-47 |
| Msa1343070 | Msa1446830 | 0.831094 | 2.027655e-55 | -8.615850e-47 |
| Msa0366240 | Msa1446830 | 0.822708 | 2.049485e-53 | -8.615850e-47 |
| Msa0376350 | Msa1446830 | 0.809520 | 1.817322e-50 | -8.615850e-47 |
| Msa0378720 | Msa1446830 | 0.807081 | 6.016396e-50 | -8.615850e-47 |
| Msa0385580 | Msa1446830 | 0.808292 | 3.327933e-50 | -8.615850e-47 |
| Msa0392510 | Msa1446830 | 0.802239 | 6.165187e-49 | -8.615850e-47 |
| Msa0410650 | Msa1446830 | 0.849451 | 3.206017e-60 | -8.615850e-47 |
| Msa0414170 | Msa1446830 | 0.801958 | 7.043551e-49 | -8.615850e-47 |
| Msa0417270 | Msa1446830 | 0.825390 | 4.812722e-54 | -8.615850e-47 |
| Msa0417880 | Msa1446830 | 0.850276 | 1.885460e-60 | -8.615850e-47 |
| Msa0419820 | Msa1446830 | 0.821404 | 4.111974e-53 | -8.615850e-47 |
| Msa0422850 | Msa1446830 | 0.814232 | 1.710823e-51 | -8.615850e-47 |
| Msa0422930 | Msa1446830 | 0.816834 | 4.508730e-52 | -8.615850e-47 |
| Msa0423040 | Msa1446830 | 0.806578 | 7.685564e-50 | -8.615850e-47 |
| Msa0423900 | Msa1446830 | 0.803046 | 4.202781e-49 | -8.615850e-47 |
| Msa0424790 | Msa1446830 | 0.806330 | 8.668708e-50 | -8.615850e-47 |
| Msa0433640 | Msa1446830 | 0.816989 | 4.159814e-52 | -8.615850e-47 |
| Msa0436050 | Msa1446830 | 0.808287 | 3.336233e-50 | -8.615850e-47 |
| Msa0436490 | Msa1446830 | -0.803271 | 3.775805e-49 | -8.615850e-47 |
| Msa0440750 | Msa1446830 | 0.811131 | 8.161618e-51 | -8.615850e-47 |
| Msa0464680 | Msa1446830 | 0.819401 | 1.184129e-52 | -8.615850e-47 |
| Msa0467430 | Msa1446830 | 0.802374 | 5.782065e-49 | -8.615850e-47 |
| Msa0467490 | Msa1446830 | 0.800845 | 1.190421e-48 | -8.615850e-47 |
| Msa0468290 | Msa1446830 | 0.805273 | 1.445750e-49 | -8.615850e-47 |
| Msa0469030 | Msa1446830 | 0.813581 | 2.381075e-51 | -8.615850e-47 |
| Msa0470690 | Msa1446830 | 0.803984 | 2.685474e-49 | -8.615850e-47 |
| Msa0475790 | Msa1446830 | 0.815001 | 1.156183e-51 | -8.615850e-47 |
| Msa0479170 | Msa1446830 | 0.820045 | 8.440292e-53 | -8.615850e-47 |
| Msa0480980 | Msa1446830 | 0.813721 | 2.217614e-51 | -8.615850e-47 |
| Msa0481530 | Msa1446830 | 0.802839 | 4.636503e-49 | -8.615850e-47 |
| Msa0993600 | Msa1446830 | 0.809287 | 2.039092e-50 | -8.615850e-47 |
| Msa0994950 | Msa1446830 | 0.809091 | 2.246261e-50 | -8.615850e-47 |
| Msa1003030 | Msa1446830 | 0.809500 | 1.835056e-50 | -8.615850e-47 |
| Msa1004840 | Msa1446830 | 0.804798 | 1.816746e-49 | -8.615850e-47 |
| Msa1013400 | Msa1446830 | 0.824373 | 8.358610e-54 | -8.615850e-47 |
| Msa1014540 | Msa1446830 | 0.808704 | 2.717064e-50 | -8.615850e-47 |
| Msa1019430 | Msa1446830 | 0.803348 | 3.639330e-49 | -8.615850e-47 |
| Msa1020670 | Msa1446830 | 0.812915 | 3.333829e-51 | -8.615850e-47 |
| Msa1040400 | Msa1446830 | 0.802258 | 6.109647e-49 | -8.615850e-47 |
| Msa1051830 | Msa1446830 | 0.809712 | 1.652339e-50 | -8.615850e-47 |
| Msa1063950 | Msa1446830 | 0.821289 | 4.369411e-53 | -8.615850e-47 |
| Msa1066490 | Msa1446830 | 0.805800 | 1.120556e-49 | -8.615850e-47 |
| Msa1070000 | Msa1446830 | 0.812328 | 4.481410e-51 | -8.615850e-47 |
| Msa1075540 | Msa1446830 | 0.803522 | 3.348487e-49 | -8.615850e-47 |
| Msa1079740 | Msa1446830 | 0.806021 | 1.007173e-49 | -8.615850e-47 |
| Msa1082500 | Msa1446830 | 0.833957 | 3.956795e-56 | -8.615850e-47 |
| Msa1085200 | Msa1446830 | 0.848641 | 5.386199e-60 | -8.615850e-47 |
| Msa1093530 | Msa1446830 | 0.819499 | 1.124700e-52 | -8.615850e-47 |
| Msa1097640 | Msa1446830 | 0.826499 | 2.624034e-54 | -8.615850e-47 |
| Msa0239570 | Msa1446830 | 0.818229 | 2.186114e-52 | -8.615850e-47 |
| Msa0240110 | Msa1446830 | 0.805440 | 1.333857e-49 | -8.615850e-47 |
| Msa0240150 | Msa1446830 | 0.803164 | 3.971901e-49 | -8.615850e-47 |
| Msa0243100 | Msa1446830 | 0.822111 | 2.820955e-53 | -8.615850e-47 |
| Msa0244810 | Msa1446830 | 0.813951 | 1.973464e-51 | -8.615850e-47 |
| Msa0244860 | Msa1446830 | 0.833683 | 4.631460e-56 | -8.615850e-47 |
| Msa0255090 | Msa1446830 | 0.805065 | 1.597706e-49 | -8.615850e-47 |
| Msa0259380 | Msa1446830 | 0.805210 | 1.490205e-49 | -8.615850e-47 |
| Msa0260610 | Msa1446830 | 0.804616 | 1.983204e-49 | -8.615850e-47 |
| Msa0261340 | Msa1446830 | 0.802624 | 5.136694e-49 | -8.615850e-47 |
| Msa0262340 | Msa1446830 | 0.800911 | 1.154339e-48 | -8.615850e-47 |
| Msa0264150 | Msa1446830 | 0.817743 | 2.814730e-52 | -8.615850e-47 |
| Msa0268130 | Msa1446830 | 0.801139 | 1.036720e-48 | -8.615850e-47 |
| Msa0270320 | Msa1446830 | 0.800829 | 1.199330e-48 | -8.615850e-47 |
| Msa0283450 | Msa1446830 | 0.844980 | 5.400328e-59 | -8.615850e-47 |
| Msa0283520 | Msa1446830 | 0.844271 | 8.385379e-59 | -8.615850e-47 |
| Msa0284410 | Msa1446830 | 0.805618 | 1.223439e-49 | -8.615850e-47 |
| Msa0284420 | Msa1446830 | 0.801638 | 8.191297e-49 | -8.615850e-47 |
| Msa0287650 | Msa1446830 | 0.817180 | 3.768331e-52 | -8.615850e-47 |
| Msa0292400 | Msa1446830 | 0.851697 | 7.498314e-61 | -8.615850e-47 |
| Msa0297790 | Msa1446830 | 0.806786 | 6.944942e-50 | -8.615850e-47 |
| Msa0298990 | Msa1446830 | 0.804664 | 1.938220e-49 | -8.615850e-47 |
| Msa0300690 | Msa1446830 | 0.810063 | 1.388251e-50 | -8.615850e-47 |
| Msa0302170 | Msa1446830 | 0.801070 | 1.070881e-48 | -8.615850e-47 |
| Msa0306300 | Msa1446830 | 0.807322 | 5.349717e-50 | -8.615850e-47 |
| Msa0309770 | Msa1446830 | 0.812335 | 4.465007e-51 | -8.615850e-47 |
| Msa0311860 | Msa1446830 | 0.801907 | 7.214135e-49 | -8.615850e-47 |
| Msa0316810 | Msa1446830 | 0.807658 | 4.539832e-50 | -8.615850e-47 |
| Msa0317280 | Msa1446830 | 0.802378 | 5.771138e-49 | -8.615850e-47 |
| Msa0317340 | Msa1446830 | 0.804832 | 1.787637e-49 | -8.615850e-47 |
| Msa0317510 | Msa1446830 | 0.804128 | 2.506222e-49 | -8.615850e-47 |
| Msa0317730 | Msa1446830 | 0.805187 | 1.506960e-49 | -8.615850e-47 |
| Msa0332000 | Msa1446830 | 0.844921 | 5.602018e-59 | -8.615850e-47 |
| Msa0333920 | Msa1446830 | 0.806752 | 7.060106e-50 | -8.615850e-47 |
| Msa0334040 | Msa1446830 | 0.808587 | 2.878691e-50 | -8.615850e-47 |
| Msa0337620 | Msa1446830 | 0.813246 | 2.821235e-51 | -8.615850e-47 |
| Msa0339480 | Msa1446830 | 0.841911 | 3.564865e-58 | -8.615850e-47 |
| Msa0340090 | Msa1446830 | 0.804022 | 2.637134e-49 | -8.615850e-47 |
| Msa0345970 | Msa1446830 | 0.802241 | 6.159252e-49 | -8.615850e-47 |
| Msa1108160 | Msa1446830 | 0.821501 | 3.905483e-53 | -8.615850e-47 |
| Msa1111110 | Msa1446830 | 0.807801 | 4.232899e-50 | -8.615850e-47 |
| Msa1123380 | Msa1446830 | 0.832605 | 8.592927e-56 | -8.615850e-47 |
| Msa1124110 | Msa1446830 | 0.804918 | 1.715000e-49 | -8.615850e-47 |
| Msa1127890 | Msa1446830 | 0.836693 | 8.055651e-57 | -8.615850e-47 |
| Msa1139810 | Msa1446830 | 0.833128 | 6.370302e-56 | -8.615850e-47 |
| Msa1147900 | Msa1446830 | 0.830023 | 3.707830e-55 | -8.615850e-47 |
| Msa1151910 | Msa1446830 | 0.813146 | 2.967354e-51 | -8.615850e-47 |
| Msa1154710 | Msa1446830 | 0.801209 | 1.003102e-48 | -8.615850e-47 |
| Msa1168950 | Msa1446830 | 0.811069 | 8.416983e-51 | -8.615850e-47 |
| Msa1187840 | Msa1446830 | 0.801443 | 8.983854e-49 | -8.615850e-47 |
| Msa1189070 | Msa1446830 | 0.809433 | 1.896890e-50 | -8.615850e-47 |
| Msa1193290 | Msa1446830 | 0.808524 | 2.968770e-50 | -8.615850e-47 |
| Msa1196440 | Msa1446830 | 0.804523 | 2.073626e-49 | -8.615850e-47 |
| Msa1199220 | Msa1446830 | 0.805081 | 1.585652e-49 | -8.615850e-47 |
| Msa1199570 | Msa1446830 | 0.807209 | 5.652444e-50 | -8.615850e-47 |
| Msa1199830 | Msa1446830 | -0.804376 | 2.225461e-49 | -8.615850e-47 |
| Msa1201650 | Msa1446830 | 0.801593 | 8.368758e-49 | -8.615850e-47 |
| Msa1209460 | Msa1446830 | 0.843003 | 1.830351e-58 | -8.615850e-47 |
| Msa1218600 | Msa1446830 | 0.824941 | 6.144852e-54 | -8.615850e-47 |
| Msa0484780 | Msa1446830 | 0.828676 | 7.876388e-55 | -8.615850e-47 |
| Msa0495320 | Msa1446830 | 0.814991 | 1.162175e-51 | -8.615850e-47 |
| Msa0495330 | Msa1446830 | 0.815623 | 8.409886e-52 | -8.615850e-47 |
| Msa0498060 | Msa1446830 | 0.811735 | 6.033156e-51 | -8.615850e-47 |
| Msa0502890 | Msa1446830 | 0.809842 | 1.549316e-50 | -8.615850e-47 |
| Msa0503580 | Msa1446830 | 0.801581 | 8.415062e-49 | -8.615850e-47 |
| Msa0507680 | Msa1446830 | 0.849398 | 3.317185e-60 | -8.615850e-47 |
| Msa0509610 | Msa1446830 | 0.823553 | 1.301768e-53 | -8.615850e-47 |
| Msa0516320 | Msa1446830 | 0.812305 | 4.533665e-51 | -8.615850e-47 |
| Msa0521500 | Msa1446830 | 0.802507 | 5.429620e-49 | -8.615850e-47 |
| Msa0521540 | Msa1446830 | 0.812162 | 4.870587e-51 | -8.615850e-47 |
| Msa0527550 | Msa1446830 | 0.815912 | 7.250669e-52 | -8.615850e-47 |
| Msa0529890 | Msa1446830 | 0.803140 | 4.017633e-49 | -8.615850e-47 |
| Msa0532070 | Msa1446830 | 0.804126 | 2.509347e-49 | -8.615850e-47 |
| Msa0541860 | Msa1446830 | 0.820902 | 5.367074e-53 | -8.615850e-47 |
| Msa0546680 | Msa1446830 | 0.850172 | 2.016693e-60 | -8.615850e-47 |
| Msa0547360 | Msa1446830 | 0.810530 | 1.100903e-50 | -8.615850e-47 |
| Msa0547720 | Msa1446830 | 0.801799 | 7.592841e-49 | -8.615850e-47 |
| Msa0557070 | Msa1446830 | 0.814871 | 1.235572e-51 | -8.615850e-47 |
| Msa0569200 | Msa1446830 | 0.838142 | 3.427579e-57 | -8.615850e-47 |
| Msa0571140 | Msa1446830 | 0.800126 | 1.668323e-48 | -8.615850e-47 |
| Msa0574890 | Msa1446830 | 0.819514 | 1.116019e-52 | -8.615850e-47 |
| Msa0577500 | Msa1446830 | 0.817347 | 3.457478e-52 | -8.615850e-47 |
| Msa0581760 | Msa1446830 | 0.811573 | 6.545268e-51 | -8.615850e-47 |
| Msa0585560 | Msa1446830 | 0.803865 | 2.842680e-49 | -8.615850e-47 |
| Msa0593650 | Msa1446830 | 0.807143 | 5.838330e-50 | -8.615850e-47 |
| Msa0601750 | Msa1446830 | 0.809368 | 1.958964e-50 | -8.615850e-47 |
| Msa0844240 | Msa1446830 | 0.804656 | 1.945507e-49 | -8.615850e-47 |
| Msa0850960 | Msa1446830 | 0.831770 | 1.382675e-55 | -8.615850e-47 |
| Msa0856920 | Msa1446830 | 0.819286 | 1.257840e-52 | -8.615850e-47 |
| Msa0861510 | Msa1446830 | 0.805531 | 1.276477e-49 | -8.615850e-47 |
| Msa0861600 | Msa1446830 | 0.806990 | 6.288610e-50 | -8.615850e-47 |
| Msa0861870 | Msa1446830 | 0.811013 | 8.656798e-51 | -8.615850e-47 |
| Msa0863870 | Msa1446830 | 0.803253 | 3.807063e-49 | -8.615850e-47 |
| Msa0863930 | Msa1446830 | 0.817687 | 2.897856e-52 | -8.615850e-47 |
| Msa0871270 | Msa1446830 | 0.817053 | 4.024486e-52 | -8.615850e-47 |
| Msa0876200 | Msa1446830 | 0.816964 | 4.213976e-52 | -8.615850e-47 |
| Msa0880140 | Msa1446830 | 0.849310 | 3.509416e-60 | -8.615850e-47 |
| Msa0888580 | Msa1446830 | 0.801626 | 8.237884e-49 | -8.615850e-47 |
| Msa0896970 | Msa1446830 | 0.807536 | 4.818274e-50 | -8.615850e-47 |
| Msa0902760 | Msa1446830 | 0.818869 | 1.564666e-52 | -8.615850e-47 |
| Msa0930780 | Msa1446830 | 0.817073 | 3.984547e-52 | -8.615850e-47 |
| Msa0938220 | Msa1446830 | 0.819658 | 1.034564e-52 | -8.615850e-47 |
| Msa0944190 | Msa1446830 | 0.809366 | 1.960975e-50 | -8.615850e-47 |
| Msa0947660 | Msa1446830 | 0.804199 | 2.422524e-49 | -8.615850e-47 |
| Msa0959360 | Msa1446830 | 0.802087 | 6.625161e-49 | -8.615850e-47 |
| Msa0966400 | Msa1446830 | 0.808100 | 3.655506e-50 | -8.615850e-47 |
| Msa0969520 | Msa1446830 | 0.803748 | 3.006489e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446830 | MtrunA17_Chr2g0327921 | 86.250 | 80 | 9 | 1 | 1 | 80 | 1 | 78 | 1.23e-44 | 139 |
| Msa1446830 | MtrunA17_Chr7g0266751 | 48.052 | 77 | 35 | 1 | 5 | 76 | 30 | 106 | 2.35e-16 | 69.3 |
| Msa1446830 | MtrunA17_Chr7g0263001 | 47.945 | 73 | 36 | 1 | 8 | 80 | 36 | 106 | 1.52e-15 | 67.4 |
| Msa1446830 | MtrunA17_Chr3g0088511 | 40.000 | 70 | 42 | 0 | 3 | 72 | 28 | 97 | 1.27e-14 | 64.7 |
| Msa1446830 | MtrunA17_Chr1g0198431 | 45.205 | 73 | 39 | 1 | 8 | 80 | 193 | 264 | 7.12e-14 | 65.1 |
| Msa1446830 | MtrunA17_Chr6g0481071 | 39.189 | 74 | 43 | 1 | 7 | 80 | 95 | 166 | 1.57e-13 | 62.8 |
| Msa1446830 | MtrunA17_Chr3g0086861 | 46.154 | 65 | 35 | 0 | 7 | 71 | 44 | 108 | 3.49e-13 | 63.9 |
| Msa1446830 | MtrunA17_Chr4g0061451 | 41.538 | 65 | 38 | 0 | 7 | 71 | 42 | 106 | 1.39e-11 | 58.9 |
| Msa1446830 | MtrunA17_Chr3g0119311 | 34.667 | 75 | 49 | 0 | 7 | 81 | 36 | 110 | 2.61e-11 | 56.2 |
| Msa1446830 | MtrunA17_Chr3g0129451 | 38.750 | 80 | 48 | 1 | 5 | 84 | 341 | 419 | 3.51e-11 | 58.2 |
| Msa1446830 | MtrunA17_Chr4g0031091 | 40.845 | 71 | 40 | 1 | 7 | 77 | 33 | 101 | 3.83e-11 | 55.1 |
| Msa1446830 | MtrunA17_Chr4g0050781 | 40.000 | 70 | 42 | 0 | 1 | 70 | 1 | 70 | 5.58e-11 | 56.6 |
| Msa1446830 | MtrunA17_Chr2g0290191 | 39.130 | 69 | 38 | 1 | 8 | 72 | 107 | 175 | 7.76e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1446830 | AT3G46020.1 | 57.500 | 80 | 32 | 1 | 1 | 80 | 1 | 78 | 4.25e-26 | 93.6 |
| Msa1446830 | AT5G59860.1 | 59.016 | 61 | 20 | 1 | 12 | 72 | 76 | 131 | 9.39e-17 | 71.2 |
| Msa1446830 | AT2G37510.1 | 43.836 | 73 | 39 | 1 | 8 | 80 | 35 | 105 | 7.91e-14 | 63.2 |
| Msa1446830 | AT5G06210.1 | 46.269 | 67 | 36 | 0 | 5 | 71 | 32 | 98 | 1.01e-13 | 63.2 |
| Msa1446830 | AT1G73530.1 | 41.892 | 74 | 41 | 1 | 7 | 80 | 77 | 148 | 3.30e-13 | 62.4 |
| Msa1446830 | AT3G20930.1 | 42.466 | 73 | 41 | 1 | 8 | 80 | 283 | 354 | 4.52e-13 | 63.9 |
| Msa1446830 | AT3G23830.2 | 41.791 | 67 | 39 | 0 | 5 | 71 | 33 | 99 | 1.88e-12 | 59.7 |
| Msa1446830 | AT3G23830.1 | 41.791 | 67 | 39 | 0 | 5 | 71 | 33 | 99 | 1.88e-12 | 59.7 |
| Msa1446830 | AT4G13860.1 | 40.299 | 67 | 40 | 0 | 5 | 71 | 1 | 67 | 2.96e-12 | 57.8 |
| Msa1446830 | AT1G60650.2 | 40.000 | 65 | 39 | 0 | 7 | 71 | 12 | 76 | 2.11e-11 | 58.9 |
| Msa1446830 | AT1G60650.1 | 40.000 | 65 | 39 | 0 | 7 | 71 | 12 | 76 | 2.11e-11 | 58.9 |
| Msa1446830 | AT2G27330.1 | 39.241 | 79 | 46 | 1 | 2 | 80 | 16 | 92 | 2.52e-11 | 56.2 |
Find 20 sgRNAs with CRISPR-Local
Find 146 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTCGAAGGCCTAAAGGTTT+TGG | 0.275643 | tig0031500:-23871 | Msa1446830:CDS |
| TTGTGAACTCACAAGTTAAT+TGG | 0.286868 | tig0031500:-21855 | Msa1446830:CDS |
| GTGACAAAACCAAAACCTTT+AGG | 0.425328 | tig0031500:+23862 | None:intergenic |
| ATCTGAAATTGAAGCTGAAA+AGG | 0.434986 | tig0031500:-23833 | Msa1446830:CDS |
| GAGTCATTGTTCTCACCATT+CGG | 0.439129 | tig0031500:-24019 | Msa1446830:CDS |
| GTTTGTCTACTTTCAGATTG+AGG | 0.459895 | tig0031500:+24214 | None:intergenic |
| ACAAACATGTCTCAGCGAAT+CGG | 0.473439 | tig0031500:-24197 | Msa1446830:exon |
| ACAAACAAACTCTGATAGCT+TGG | 0.505048 | tig0031500:+21806 | None:intergenic |
| CAAACATGTCTCAGCGAATC+GGG | 0.519761 | tig0031500:-24196 | Msa1446830:exon |
| TTAGGTGGTTGAACTTGTCA+TGG | 0.531240 | tig0031500:-24270 | Msa1446830:five_prime_UTR |
| CTAGGAAAGCGTTGAATGGA+AGG | 0.544048 | tig0031500:-23810 | Msa1446830:CDS |
| AAGGCTAGGAAAGCGTTGAA+TGG | 0.548859 | tig0031500:-23814 | Msa1446830:CDS |
| ACCTTCGTGCAAACAATCAA+AGG | 0.559013 | tig0031500:-24240 | Msa1446830:five_prime_UTR |
| TTGATTGTTTGCACGAAGGT+AGG | 0.574464 | tig0031500:+24243 | None:intergenic |
| AAATTGAAGCTGAAAAGGCT+AGG | 0.589928 | tig0031500:-23828 | Msa1446830:CDS |
| TCCTTTGATTGTTTGCACGA+AGG | 0.598109 | tig0031500:+24239 | None:intergenic |
| TAGGAAAGCGTTGAATGGAA+GGG | 0.662886 | tig0031500:-23809 | Msa1446830:intron |
| CCTTCGGTAAGTACTCCGAA+TGG | 0.672529 | tig0031500:+24004 | None:intergenic |
| CCATTCGGAGTACTTACCGA+AGG | 0.685995 | tig0031500:-24004 | Msa1446830:intron |
| TGACTCTAATTGTTGCTGTG+TGG | 0.709029 | tig0031500:+24036 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAAATAAATAAATCGAAAT+AGG | + | tig0031500:22371-22390 | None:intergenic | 15.0% |
| !!! | TTTATATTTTGTTATAGGAA+TGG | - | tig0031500:22577-22596 | Msa1446830:intron | 15.0% |
| !! | TATTCTTCAATAATCTAATT+TGG | - | tig0031500:24062-24081 | Msa1446830:intron | 15.0% |
| !! | ATTCTTCAATAATCTAATTT+GGG | - | tig0031500:24063-24082 | Msa1446830:intron | 15.0% |
| !! | TTATAACTTATAAGCACTTA+GGG | - | tig0031500:22640-22659 | Msa1446830:intron | 20.0% |
| !!! | TTTTTGAATACTGAAATCAA+TGG | - | tig0031500:23120-23139 | Msa1446830:intron | 20.0% |
| !! | CCAAGATTAATTAATTGATT+GGG | + | tig0031500:23559-23578 | None:intergenic | 20.0% |
| !! | TCCAAGATTAATTAATTGAT+TGG | + | tig0031500:23560-23579 | None:intergenic | 20.0% |
| !!! | AAGTCTAAGATTCTTTTTAT+TGG | + | tig0031500:23592-23611 | None:intergenic | 20.0% |
| !! | CTATAAAAGTGAAGAAAAAA+AGG | + | tig0031500:24186-24205 | None:intergenic | 20.0% |
| ! | AAACAATGTTGAAAAGGTTT+GGG | + | tig0031500:21985-22004 | None:intergenic | 25.0% |
| ! | GAAATGAAACAATGTTGAAA+AGG | + | tig0031500:21991-22010 | None:intergenic | 25.0% |
| !! | TTCATTTCATTTCATTTTCC+AGG | - | tig0031500:22003-22022 | Msa1446830:intron | 25.0% |
| !!! | CATTTTAACAAACACATTCA+TGG | + | tig0031500:22325-22344 | None:intergenic | 25.0% |
| ! | ATTTATTTGAGCTTATCTAC+TGG | - | tig0031500:22381-22400 | Msa1446830:intron | 25.0% |
| ! | AACAAGCTGAAAATAACTTA+TGG | + | tig0031500:22462-22481 | None:intergenic | 25.0% |
| !!! | GTTTGACTTTTGTTTTGTAA+CGG | - | tig0031500:22536-22555 | Msa1446830:intron | 25.0% |
| ! | GTTATAACTTATAAGCACTT+AGG | - | tig0031500:22639-22658 | Msa1446830:intron | 25.0% |
| !!! | GTTATTTTCATAAGCTATCT+TGG | + | tig0031500:22791-22810 | None:intergenic | 25.0% |
| ! | ATAAGCTGTTTATCCAATTA+TGG | - | tig0031500:22914-22933 | Msa1446830:intron | 25.0% |
| !! | TAAAGCATTAAAGCCATAAT+TGG | + | tig0031500:22930-22949 | None:intergenic | 25.0% |
| !!! | AGTTTAGCTTTCCTTTTTTT+TGG | - | tig0031500:22961-22980 | Msa1446830:intron | 25.0% |
| ! | AGATTACAGAACCAAAAAAA+AGG | + | tig0031500:22975-22994 | None:intergenic | 25.0% |
| ! | GATTATTAGTGTGTTATCAA+AGG | - | tig0031500:23041-23060 | Msa1446830:intron | 25.0% |
| ! | TATATATATAAAGCTTGTCC+AGG | - | tig0031500:23316-23335 | Msa1446830:intron | 25.0% |
| ! | TACTTATTAACTATGAAGCA+CGG | - | tig0031500:23345-23364 | Msa1446830:intron | 25.0% |
| !!! | TTTCAAATTATTTGCTGTGT+CGG | + | tig0031500:23388-23407 | None:intergenic | 25.0% |
| ! | TTCAATGTAATTACAAGTGT+TGG | - | tig0031500:23420-23439 | Msa1446830:intron | 25.0% |
| ! | CCCAATCAATTAATTAATCT+TGG | - | tig0031500:23556-23575 | Msa1446830:intron | 25.0% |
| ! | AGAACAACATATAGATGATA+TGG | + | tig0031500:23823-23842 | None:intergenic | 25.0% |
| ! | GATAAAAATCATGTATCCTT+CGG | + | tig0031500:23940-23959 | None:intergenic | 25.0% |
| !! | ACAAATATGAGTATCCATTT+TGG | - | tig0031500:24096-24115 | Msa1446830:intron | 25.0% |
| ! | TTGCATCATAATTTCCAAAA+TGG | + | tig0031500:24113-24132 | None:intergenic | 25.0% |
| ! | TTGCAAAAATTGATTGTAGT+TGG | - | tig0031500:24138-24157 | Msa1446830:intron | 25.0% |
| ! | AAAATTGATTGTAGTTGGTT+TGG | - | tig0031500:24143-24162 | Msa1446830:intron | 25.0% |
| !!! | TTCACTTTTATAGTACAAGA+TGG | - | tig0031500:24193-24212 | Msa1446830:CDS | 25.0% |
| GAAACAATGTTGAAAAGGTT+TGG | + | tig0031500:21986-22005 | None:intergenic | 30.0% | |
| TTATCGATCAAAAAACTCGA+AGG | - | tig0031500:22191-22210 | Msa1446830:intron | 30.0% | |
| ! | ATCTGAAATTGAAGCTGAAA+AGG | - | tig0031500:22243-22262 | Msa1446830:intron | 30.0% |
| TTCTAAATCACTAATCAGTC+AGG | + | tig0031500:22348-22367 | None:intergenic | 30.0% | |
| TAGCTTATGAAGGTAGTTTA+CGG | - | tig0031500:22431-22450 | Msa1446830:intron | 30.0% | |
| ! | AGATGTTTTCATAAGCTAAC+AGG | + | tig0031500:22497-22516 | None:intergenic | 30.0% |
| ATAAGCGTTTATCATGTAAG+TGG | + | tig0031500:22619-22638 | None:intergenic | 30.0% | |
| !!! | GTTCATTTTAGCTTAACTAC+TGG | - | tig0031500:22676-22695 | Msa1446830:intron | 30.0% |
| ! | GAGCATATAACACTTTTCAT+AGG | - | tig0031500:22737-22756 | Msa1446830:intron | 30.0% |
| !! | CTTACATAAGCTATTTCTAC+AGG | + | tig0031500:22856-22875 | None:intergenic | 30.0% |
| !! | ATGGCTTTAATGCTTTACTT+CGG | - | tig0031500:22933-22952 | Msa1446830:intron | 30.0% |
| TGGAACAACTATGTAACTTA+AGG | + | tig0031500:23175-23194 | None:intergenic | 30.0% | |
| AGTTAATAAGTAGCTAATCC+TGG | + | tig0031500:23337-23356 | None:intergenic | 30.0% | |
| TGTTAATAAGCTATGAAGCA+CGG | + | tig0031500:23498-23517 | None:intergenic | 30.0% | |
| TAGTTAGTTACAACTCTCTT+AGG | + | tig0031500:23535-23554 | None:intergenic | 30.0% | |
| CTCTATCCAACAACTTATAT+TGG | + | tig0031500:23684-23703 | None:intergenic | 30.0% | |
| CAATATAAGTTGTTGGATAG+AGG | - | tig0031500:23682-23701 | Msa1446830:intron | 30.0% | |
| CAAGTACAATTGAGATAGTA+AGG | + | tig0031500:23714-23733 | None:intergenic | 30.0% | |
| CTTACTATCTCAATTGTACT+TGG | - | tig0031500:23712-23731 | Msa1446830:intron | 30.0% | |
| AAATACACAAGATTTGAGCA+TGG | + | tig0031500:23962-23981 | None:intergenic | 30.0% | |
| !! | TGACATCTGAATAAGTTGAT+CGG | + | tig0031500:23985-24004 | None:intergenic | 30.0% |
| TTGTGAACTCACAAGTTAAT+TGG | - | tig0031500:24221-24240 | Msa1446830:five_prime_UTR | 30.0% | |
| GTTTGTCTACTTTCAGATTG+AGG | + | tig0031500:21865-21884 | None:intergenic | 35.0% | |
| GTGACAAAACCAAAACCTTT+AGG | + | tig0031500:22217-22236 | None:intergenic | 35.0% | |
| AAATTGAAGCTGAAAAGGCT+AGG | - | tig0031500:22248-22267 | Msa1446830:intron | 35.0% | |
| CTTATCATGATAAGCACATG+TGG | + | tig0031500:22890-22909 | None:intergenic | 35.0% | |
| TGTGTTATCAAAGGAAGTTG+TGG | - | tig0031500:23050-23069 | Msa1446830:intron | 35.0% | |
| GTGTTATCAAAGGAAGTTGT+GGG | - | tig0031500:23051-23070 | Msa1446830:intron | 35.0% | |
| TGTTATCAAAGGAAGTTGTG+GGG | - | tig0031500:23052-23071 | Msa1446830:intron | 35.0% | |
| TTTCACTTCTGCTACAATGA+TGG | - | tig0031500:23082-23101 | Msa1446830:intron | 35.0% | |
| TTCACTTCTGCTACAATGAT+GGG | - | tig0031500:23083-23102 | Msa1446830:intron | 35.0% | |
| ATCCATGGATTCTCAACAAT+TGG | + | tig0031500:23198-23217 | None:intergenic | 35.0% | |
| ACAGAGCATATTGATACTCA+TGG | - | tig0031500:23250-23269 | Msa1446830:intron | 35.0% | |
| TTAACTATGAAGCACGGATA+CGG | - | tig0031500:23351-23370 | Msa1446830:intron | 35.0% | |
| !! | GTAATTACAAGTGTTGGTGT+CGG | - | tig0031500:23426-23445 | Msa1446830:intron | 35.0% |
| !! | TAATTACAAGTGTTGGTGTC+GGG | - | tig0031500:23427-23446 | Msa1446830:intron | 35.0% |
| ! | AGACATAGAGCATCAATAGT+TGG | - | tig0031500:23612-23631 | Msa1446830:intron | 35.0% |
| ! | AGAGCATCAATAGTTGGATT+TGG | - | tig0031500:23618-23637 | Msa1446830:intron | 35.0% |
| GAGCATCAATAGTTGGATTT+GGG | - | tig0031500:23619-23638 | Msa1446830:intron | 35.0% | |
| AGTCAGCCAATATAAGTTGT+TGG | - | tig0031500:23675-23694 | Msa1446830:intron | 35.0% | |
| TCTCAATTGTACTTGGTCAA+CGG | - | tig0031500:23719-23738 | Msa1446830:intron | 35.0% | |
| !! | CTAGCTTTGTCAAAGGAAAA+TGG | + | tig0031500:23781-23800 | None:intergenic | 35.0% |
| ! | CATTTTCCTTTGACAAAGCT+AGG | - | tig0031500:23779-23798 | Msa1446830:intron | 35.0% |
| !! | ATTGTAGTTGGTTTGGAAGT+TGG | - | tig0031500:24150-24169 | Msa1446830:intron | 35.0% |
| ACAAACAAACTCTGATAGCT+TGG | + | tig0031500:24273-24292 | None:intergenic | 35.0% | |
| TTAGGTGGTTGAACTTGTCA+TGG | - | tig0031500:21806-21825 | Msa1446830:CDS | 40.0% | |
| TTGATTGTTTGCACGAAGGT+AGG | + | tig0031500:21836-21855 | None:intergenic | 40.0% | |
| ACCTTCGTGCAAACAATCAA+AGG | - | tig0031500:21836-21855 | Msa1446830:CDS | 40.0% | |
| TCCTTTGATTGTTTGCACGA+AGG | + | tig0031500:21840-21859 | None:intergenic | 40.0% | |
| ACAAACATGTCTCAGCGAAT+CGG | - | tig0031500:21879-21898 | Msa1446830:intron | 40.0% | |
| GTACTCGACGAAAATGAATG+AGG | + | tig0031500:21955-21974 | None:intergenic | 40.0% | |
| GTGGTGTAAAACGATAATCC+TGG | + | tig0031500:22024-22043 | None:intergenic | 40.0% | |
| TGACTCTAATTGTTGCTGTG+TGG | + | tig0031500:22043-22062 | None:intergenic | 40.0% | |
| GAGTCATTGTTCTCACCATT+CGG | - | tig0031500:22057-22076 | Msa1446830:intron | 40.0% | |
| CAAAAAACTCGAAGGCCTAA+AGG | - | tig0031500:22199-22218 | Msa1446830:intron | 40.0% | |
| !! | TAGGAAAGCGTTGAATGGAA+GGG | - | tig0031500:22267-22286 | Msa1446830:intron | 40.0% |
| TCTACTGGCATAAGCATTTG+TGG | - | tig0031500:22396-22415 | Msa1446830:intron | 40.0% | |
| AAGCATTTGTGGAACTGTTC+CGG | - | tig0031500:22407-22426 | Msa1446830:intron | 40.0% | |
| AACTACCTTCATAAGCTAGC+CGG | + | tig0031500:22429-22448 | None:intergenic | 40.0% | |
| ! | ATAAGCACTTAGGGCTTGTT+TGG | - | tig0031500:22649-22668 | Msa1446830:intron | 40.0% |
| GTGAACAAGCATTCTGTTGT+TGG | - | tig0031500:23005-23024 | Msa1446830:intron | 40.0% | |
| AGCATTCTGTTGTTGGTCAA+TGG | - | tig0031500:23012-23031 | Msa1446830:intron | 40.0% | |
| TCACTTCTGCTACAATGATG+GGG | - | tig0031500:23084-23103 | Msa1446830:intron | 40.0% | |
| ! | AATGATGGGGTAGACTTGAT+GGG | - | tig0031500:23097-23116 | Msa1446830:intron | 40.0% |
| CATGGATTCTCAACAATTGG+TGG | + | tig0031500:23195-23214 | None:intergenic | 40.0% | |
| CACCAATTGTTGAGAATCCA+TGG | - | tig0031500:23193-23212 | Msa1446830:intron | 40.0% | |
| TGTTGAGAATCCATGGATCA+AGG | - | tig0031500:23200-23219 | Msa1446830:intron | 40.0% | |
| GTTGAGAATCCATGGATCAA+GGG | - | tig0031500:23201-23220 | Msa1446830:intron | 40.0% | |
| GTTACAACTCTCTTAGGAGT+TGG | + | tig0031500:23529-23548 | None:intergenic | 40.0% | |
| ! | CTTATATTGGCTGACTGCAA+TGG | + | tig0031500:23671-23690 | None:intergenic | 40.0% |
| !! | CAGATTCCTAGCTTTGTCAA+AGG | + | tig0031500:23788-23807 | None:intergenic | 40.0% |
| ATCAACTATCTGCACCATGT+GGG | + | tig0031500:23887-23906 | None:intergenic | 40.0% | |
| CAAACATGTCTCAGCGAATC+GGG | - | tig0031500:21880-21899 | Msa1446830:intron | 45.0% | |
| CACATACACACACACACCTT+CGG | + | tig0031500:22091-22110 | None:intergenic | 45.0% | |
| GGTGAGAAGAGAAAGAAGAG+AGG | + | tig0031500:22123-22142 | None:intergenic | 45.0% | |
| ATCAGAACCGACATAGCAGT+GGG | + | tig0031500:22147-22166 | None:intergenic | 45.0% | |
| AATCAGAACCGACATAGCAG+TGG | + | tig0031500:22148-22167 | None:intergenic | 45.0% | |
| ! | ACTCGAAGGCCTAAAGGTTT+TGG | - | tig0031500:22205-22224 | Msa1446830:intron | 45.0% |
| !! | AAGGCTAGGAAAGCGTTGAA+TGG | - | tig0031500:22262-22281 | Msa1446830:intron | 45.0% |
| !! | CTAGGAAAGCGTTGAATGGA+AGG | - | tig0031500:22266-22285 | Msa1446830:intron | 45.0% |
| ! | CACTTAGGGCTTGTTTGGAT+TGG | - | tig0031500:22654-22673 | Msa1446830:intron | 45.0% |
| ! | CAATGATGGGGTAGACTTGA+TGG | - | tig0031500:23096-23115 | Msa1446830:intron | 45.0% |
| GATCAAGGGAGGAAGATCAT+AGG | - | tig0031500:23215-23234 | Msa1446830:intron | 45.0% | |
| ! | CTCTCTTAGGAGTTGGTTAG+CGG | + | tig0031500:23522-23541 | None:intergenic | 45.0% |
| GGGGGATATTACTGTACTGA+AGG | + | tig0031500:23866-23885 | None:intergenic | 45.0% | |
| TACAGTAATATCCCCCCACA+TGG | - | tig0031500:23870-23889 | Msa1446830:CDS | 45.0% | |
| TCAACTATCTGCACCATGTG+GGG | + | tig0031500:23886-23905 | None:intergenic | 45.0% | |
| CATCAACTATCTGCACCATG+TGG | + | tig0031500:23888-23907 | None:intergenic | 45.0% | |
| CACATGGTGCAGATAGTTGA+TGG | - | tig0031500:23886-23905 | Msa1446830:CDS | 45.0% | |
| !! | TGGTGCAGATAGTTGATGGA+AGG | - | tig0031500:23890-23909 | Msa1446830:CDS | 45.0% |
| CGTTGAACATGCAAAACCGA+AGG | - | tig0031500:23921-23940 | Msa1446830:intron | 45.0% | |
| !!! | TTTATTTTATATTTTGTTAT+AGG | - | tig0031500:22572-22591 | Msa1446830:intron | 5.0% |
| CCTTCGGTAAGTACTCCGAA+TGG | + | tig0031500:22075-22094 | None:intergenic | 50.0% | |
| ! | CCATTCGGAGTACTTACCGA+AGG | - | tig0031500:22072-22091 | Msa1446830:intron | 50.0% |
| TCAGAACCGACATAGCAGTG+GGG | + | tig0031500:22146-22165 | None:intergenic | 50.0% | |
| !! | CTGTTCCGGCTAGCTTATGA+AGG | - | tig0031500:22421-22440 | Msa1446830:intron | 50.0% |
| GAGAATCCATGGATCAAGGG+AGG | - | tig0031500:23204-23223 | Msa1446830:intron | 50.0% | |
| GATCTTCCTCCCTTGATCCA+TGG | + | tig0031500:23213-23232 | None:intergenic | 50.0% | |
| GGGAGGAAGATCATAGGCAT+AGG | - | tig0031500:23221-23240 | Msa1446830:intron | 50.0% | |
| GATTAGACGTGTCCCAGTGT+CGG | + | tig0031500:23465-23484 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | + | tig0031500:23487-23506 | None:intergenic | 50.0% | |
| AACTATCTGCACCATGTGGG+GGG | + | tig0031500:23884-23903 | None:intergenic | 50.0% | |
| CAACTATCTGCACCATGTGG+GGG | + | tig0031500:23885-23904 | None:intergenic | 50.0% | |
| AGAACCGACATAGCAGTGGG+GGG | + | tig0031500:22144-22163 | None:intergenic | 55.0% | |
| CAGAACCGACATAGCAGTGG+GGG | + | tig0031500:22145-22164 | None:intergenic | 55.0% | |
| ACTGGGACACGTCTAATCCG+AGG | - | tig0031500:23467-23486 | Msa1446830:intron | 55.0% | |
| CTCACCCCCCACTGCTATGT+CGG | - | tig0031500:22137-22156 | Msa1446830:intron | 60.0% | |
| CACGCCACGTGTCCGACACT+GGG | - | tig0031500:23450-23469 | Msa1446830:intron | 65.0% | |
| ! | GTGTCCCAGTGTCGGACACG+TGG | + | tig0031500:23457-23476 | None:intergenic | 65.0% |
| GCACGCCACGTGTCCGACAC+TGG | - | tig0031500:23449-23468 | Msa1446830:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0031500 | gene | 21804 | 24294 | 21804 | ID=Msa1446830;Name=Msa1446830 |
| tig0031500 | mRNA | 21804 | 24294 | 21804 | ID=Msa1446830-mRNA-1;Parent=Msa1446830;Name=Msa1446830-mRNA-1;_AED=0.25;_eAED=0.43;_QI=81|0.5|0.6|1|0.5|0.6|5|0|102 |
| tig0031500 | exon | 21804 | 21892 | 21804 | ID=Msa1446830-mRNA-1:exon:15609;Parent=Msa1446830-mRNA-1 |
| tig0031500 | exon | 22093 | 22099 | 22093 | ID=Msa1446830-mRNA-1:exon:15608;Parent=Msa1446830-mRNA-1 |
| tig0031500 | exon | 23810 | 23916 | 23810 | ID=Msa1446830-mRNA-1:exon:15607;Parent=Msa1446830-mRNA-1 |
| tig0031500 | exon | 24005 | 24073 | 24005 | ID=Msa1446830-mRNA-1:exon:15606;Parent=Msa1446830-mRNA-1 |
| tig0031500 | exon | 24177 | 24294 | 24177 | ID=Msa1446830-mRNA-1:exon:15605;Parent=Msa1446830-mRNA-1 |
| tig0031500 | five_prime_UTR | 24214 | 24294 | 24214 | ID=Msa1446830-mRNA-1:five_prime_utr;Parent=Msa1446830-mRNA-1 |
| tig0031500 | CDS | 24177 | 24213 | 24177 | ID=Msa1446830-mRNA-1:cds;Parent=Msa1446830-mRNA-1 |
| tig0031500 | CDS | 24005 | 24073 | 24005 | ID=Msa1446830-mRNA-1:cds;Parent=Msa1446830-mRNA-1 |
| tig0031500 | CDS | 23810 | 23916 | 23810 | ID=Msa1446830-mRNA-1:cds;Parent=Msa1446830-mRNA-1 |
| tig0031500 | CDS | 22093 | 22099 | 22093 | ID=Msa1446830-mRNA-1:cds;Parent=Msa1446830-mRNA-1 |
| tig0031500 | CDS | 21804 | 21892 | 21804 | ID=Msa1446830-mRNA-1:cds;Parent=Msa1446830-mRNA-1 |
| Gene Sequence |
| Protein sequence |
