Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707200 | KEH21261.1 | 86.218 | 312 | 17 | 1 | 13 | 324 | 5 | 290 | 0.0 | 549 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707200 | sp|P52410|KASC1_ARATH | 73.485 | 264 | 70 | 0 | 60 | 323 | 37 | 300 | 9.43e-146 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707200 | A0A072TVR5 | 86.218 | 312 | 17 | 1 | 13 | 324 | 5 | 290 | 0.0 | 549 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0707200 | 0.804003 | 2.661087e-49 | -8.615850e-47 |
| Msa0027020 | Msa0707200 | 0.814764 | 1.304694e-51 | -8.615850e-47 |
| Msa0042520 | Msa0707200 | 0.815118 | 1.088856e-51 | -8.615850e-47 |
| Msa0067370 | Msa0707200 | 0.814500 | 1.493019e-51 | -8.615850e-47 |
| Msa0067750 | Msa0707200 | 0.807363 | 5.243313e-50 | -8.615850e-47 |
| Msa0074860 | Msa0707200 | 0.800958 | 1.128888e-48 | -8.615850e-47 |
| Msa0079100 | Msa0707200 | 0.807079 | 6.022484e-50 | -8.615850e-47 |
| Msa0086620 | Msa0707200 | 0.807275 | 5.472231e-50 | -8.615850e-47 |
| Msa0604690 | Msa0707200 | 0.813430 | 2.569507e-51 | -8.615850e-47 |
| Msa0606260 | Msa0707200 | 0.815505 | 8.932280e-52 | -8.615850e-47 |
| Msa0616890 | Msa0707200 | 0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0619450 | Msa0707200 | 0.804313 | 2.293525e-49 | -8.615850e-47 |
| Msa0619530 | Msa0707200 | 0.807841 | 4.150794e-50 | -8.615850e-47 |
| Msa0628200 | Msa0707200 | -0.801610 | 8.300552e-49 | -8.615850e-47 |
| Msa0638010 | Msa0707200 | 0.800526 | 1.382947e-48 | -8.615850e-47 |
| Msa0644340 | Msa0707200 | -0.820063 | 8.361409e-53 | -8.615850e-47 |
| Msa0646030 | Msa0707200 | 0.806152 | 9.450435e-50 | -8.615850e-47 |
| Msa0651120 | Msa0707200 | 0.801656 | 8.124662e-49 | -8.615850e-47 |
| Msa0653370 | Msa0707200 | 0.823288 | 1.501428e-53 | -8.615850e-47 |
| Msa0659360 | Msa0707200 | 0.805426 | 1.342313e-49 | -8.615850e-47 |
| Msa0659580 | Msa0707200 | 0.803394 | 3.560391e-49 | -8.615850e-47 |
| Msa0662140 | Msa0707200 | 0.800719 | 1.262842e-48 | -8.615850e-47 |
| Msa0673620 | Msa0707200 | 0.817293 | 3.554803e-52 | -8.615850e-47 |
| Msa0681100 | Msa0707200 | 0.806720 | 7.171344e-50 | -8.615850e-47 |
| Msa0685530 | Msa0707200 | 0.834947 | 2.232141e-56 | -8.615850e-47 |
| Msa0695250 | Msa0707200 | 0.809797 | 1.584410e-50 | -8.615850e-47 |
| Msa0695800 | Msa0707200 | 0.813564 | 2.401566e-51 | -8.615850e-47 |
| Msa0700870 | Msa0707200 | 0.803068 | 4.157719e-49 | -8.615850e-47 |
| Msa0700930 | Msa0707200 | 0.808365 | 3.210830e-50 | -8.615850e-47 |
| Msa0704790 | Msa0707200 | 0.801801 | 7.586796e-49 | -8.615850e-47 |
| Msa0706790 | Msa0707200 | 0.801758 | 7.742383e-49 | -8.615850e-47 |
| Msa0707200 | Msa0750200 | 0.801386 | 9.226832e-49 | -8.615850e-47 |
| Msa0707200 | Msa0768240 | 0.801299 | 9.616118e-49 | -8.615850e-47 |
| Msa0707200 | Msa0770540 | 0.801071 | 1.070602e-48 | -8.615850e-47 |
| Msa0707200 | Msa0801920 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
| Msa0707200 | Msa0820130 | 0.804102 | 2.537305e-49 | -8.615850e-47 |
| Msa0707200 | Msa0826820 | 0.817850 | 2.662805e-52 | -8.615850e-47 |
| Msa0707200 | Msa0828730 | 0.810275 | 1.249751e-50 | -8.615850e-47 |
| Msa0707200 | Msa0829250 | 0.800086 | 1.699339e-48 | -8.615850e-47 |
| Msa0707200 | Msa0838120 | 0.803896 | 2.800468e-49 | -8.615850e-47 |
| Msa0707200 | Msa0865500 | 0.813675 | 2.270419e-51 | -8.615850e-47 |
| Msa0707200 | Msa0869060 | 0.802755 | 4.826338e-49 | -8.615850e-47 |
| Msa0707200 | Msa0881880 | 0.832001 | 1.212485e-55 | -8.615850e-47 |
| Msa0707200 | Msa0925940 | -0.801064 | 1.074124e-48 | -8.615850e-47 |
| Msa0707200 | Msa0929440 | 0.807392 | 5.170621e-50 | -8.615850e-47 |
| Msa0707200 | Msa0930150 | 0.801294 | 9.638436e-49 | -8.615850e-47 |
| Msa0707200 | Msa0934150 | 0.811158 | 8.051102e-51 | -8.615850e-47 |
| Msa0707200 | Msa0945160 | 0.800088 | 1.698338e-48 | -8.615850e-47 |
| Msa0707200 | Msa0958960 | 0.813488 | 2.495248e-51 | -8.615850e-47 |
| Msa0707200 | Msa0968060 | 0.800376 | 1.483939e-48 | -8.615850e-47 |
| Msa0707200 | Msa0974410 | 0.800602 | 1.334724e-48 | -8.615850e-47 |
| Msa0707200 | Msa0984230 | 0.804278 | 2.332642e-49 | -8.615850e-47 |
| Msa0707200 | Msa1020160 | 0.823100 | 1.661428e-53 | -8.615850e-47 |
| Msa0707200 | Msa1026160 | 0.807344 | 5.291212e-50 | -8.615850e-47 |
| Msa0707200 | Msa1083620 | 0.805804 | 1.118299e-49 | -8.615850e-47 |
| Msa0707200 | Msa1086310 | 0.804524 | 2.073132e-49 | -8.615850e-47 |
| Msa0707200 | Msa1092770 | 0.834388 | 3.085633e-56 | -8.615850e-47 |
| Msa0707200 | Msa1111850 | 0.812748 | 3.627287e-51 | -8.615850e-47 |
| Msa0707200 | Msa1117770 | 0.810996 | 8.731044e-51 | -8.615850e-47 |
| Msa0707200 | Msa1121720 | 0.811804 | 5.827642e-51 | -8.615850e-47 |
| Msa0707200 | Msa1130150 | 0.815246 | 1.019695e-51 | -8.615850e-47 |
| Msa0707200 | Msa1132880 | 0.800585 | 1.345049e-48 | -8.615850e-47 |
| Msa0707200 | Msa1156120 | 0.849123 | 3.956245e-60 | -8.615850e-47 |
| Msa0707200 | Msa1158180 | 0.801193 | 1.010411e-48 | -8.615850e-47 |
| Msa0707200 | Msa1165330 | 0.801413 | 9.111365e-49 | -8.615850e-47 |
| Msa0707200 | Msa1199540 | 0.808707 | 2.712875e-50 | -8.615850e-47 |
| Msa0707200 | Msa1203320 | 0.803327 | 3.675573e-49 | -8.615850e-47 |
| Msa0707200 | Msa1206510 | 0.815021 | 1.144287e-51 | -8.615850e-47 |
| Msa0707200 | Msa1212150 | 0.807813 | 4.207478e-50 | -8.615850e-47 |
| Msa0707200 | Msa1228260 | 0.802386 | 5.749745e-49 | -8.615850e-47 |
| Msa0707200 | Msa1229670 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
| Msa0707200 | Msa1236120 | 0.810885 | 9.226574e-51 | -8.615850e-47 |
| Msa0707200 | Msa1271220 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
| Msa0707200 | Msa1278080 | 0.802217 | 6.229086e-49 | -8.615850e-47 |
| Msa0707200 | Msa1279200 | 0.806388 | 8.426538e-50 | -8.615850e-47 |
| Msa0707200 | Msa1291070 | 0.801396 | 9.183091e-49 | -8.615850e-47 |
| Msa0707200 | Msa1293040 | 0.833041 | 6.695342e-56 | -8.615850e-47 |
| Msa0707200 | Msa1298170 | 0.825771 | 3.909574e-54 | -8.615850e-47 |
| Msa0707200 | Msa1328680 | 0.813315 | 2.723418e-51 | -8.615850e-47 |
| Msa0707200 | Msa1331720 | 0.804686 | 1.917652e-49 | -8.615850e-47 |
| Msa0707200 | Msa1348180 | 0.802525 | 5.383927e-49 | -8.615850e-47 |
| Msa0707200 | Msa1350590 | 0.815017 | 1.146499e-51 | -8.615850e-47 |
| Msa0707200 | Msa1356100 | 0.817390 | 3.380550e-52 | -8.615850e-47 |
| Msa0707200 | Msa1357710 | 0.812644 | 3.821775e-51 | -8.615850e-47 |
| Msa0707200 | Msa1361580 | 0.809515 | 1.821777e-50 | -8.615850e-47 |
| Msa0707200 | Msa1372460 | 0.803838 | 2.879166e-49 | -8.615850e-47 |
| Msa0707200 | Msa1372470 | 0.827589 | 1.439100e-54 | -8.615850e-47 |
| Msa0707200 | Msa1381340 | 0.812581 | 3.944166e-51 | -8.615850e-47 |
| Msa0707200 | Msa1386910 | 0.808564 | 2.911384e-50 | -8.615850e-47 |
| Msa0707200 | Msa1395200 | 0.806061 | 9.876172e-50 | -8.615850e-47 |
| Msa0707200 | Msa1408230 | 0.809516 | 1.820616e-50 | -8.615850e-47 |
| Msa0707200 | Msa1410360 | 0.820384 | 7.058201e-53 | -8.615850e-47 |
| Msa0707200 | Msa1410500 | 0.807604 | 4.660565e-50 | -8.615850e-47 |
| Msa0707200 | Msa1415510 | 0.805017 | 1.635164e-49 | -8.615850e-47 |
| Msa0707200 | Msa1424250 | 0.821539 | 3.826972e-53 | -8.615850e-47 |
| Msa0707200 | Msa1424490 | 0.810102 | 1.362010e-50 | -8.615850e-47 |
| Msa0707200 | Msa1432100 | 0.800990 | 1.112023e-48 | -8.615850e-47 |
| Msa0707200 | Msa1434850 | 0.835112 | 2.028295e-56 | -8.615850e-47 |
| Msa0707200 | Msa1434860 | 0.811920 | 5.498742e-51 | -8.615850e-47 |
| Msa0707200 | Msa1439000 | 0.802459 | 5.555784e-49 | -8.615850e-47 |
| Msa0707200 | Msa1451200 | 0.817985 | 2.482557e-52 | -8.615850e-47 |
| Msa0707200 | Msa1452800 | 0.801804 | 7.575626e-49 | -8.615850e-47 |
| Msa0707200 | Msa1457390 | 0.812738 | 3.645754e-51 | -8.615850e-47 |
| Msa0707200 | Msa1459130 | 0.803957 | 2.720613e-49 | -8.615850e-47 |
| Msa0707200 | Msa1461840 | 0.806138 | 9.512924e-50 | -8.615850e-47 |
| Msa0707200 | Msa1462210 | 0.806618 | 7.537275e-50 | -8.615850e-47 |
| Msa0141090 | Msa0707200 | 0.818808 | 1.615457e-52 | -8.615850e-47 |
| Msa0159240 | Msa0707200 | 0.804216 | 2.402688e-49 | -8.615850e-47 |
| Msa0163400 | Msa0707200 | 0.801844 | 7.432228e-49 | -8.615850e-47 |
| Msa0164580 | Msa0707200 | 0.807860 | 4.112096e-50 | -8.615850e-47 |
| Msa0167160 | Msa0707200 | 0.812380 | 4.365111e-51 | -8.615850e-47 |
| Msa0175240 | Msa0707200 | 0.805996 | 1.019330e-49 | -8.615850e-47 |
| Msa0216150 | Msa0707200 | 0.800891 | 1.164894e-48 | -8.615850e-47 |
| Msa0232160 | Msa0707200 | 0.801676 | 8.047732e-49 | -8.615850e-47 |
| Msa0369080 | Msa0707200 | 0.812746 | 3.629590e-51 | -8.615850e-47 |
| Msa0374840 | Msa0707200 | 0.819613 | 1.059383e-52 | -8.615850e-47 |
| Msa0375100 | Msa0707200 | 0.811394 | 7.157358e-51 | -8.615850e-47 |
| Msa0379950 | Msa0707200 | 0.800858 | 1.183454e-48 | -8.615850e-47 |
| Msa0382060 | Msa0707200 | 0.830912 | 2.248371e-55 | -8.615850e-47 |
| Msa0386230 | Msa0707200 | 0.824100 | 9.689081e-54 | -8.615850e-47 |
| Msa0389890 | Msa0707200 | 0.801035 | 1.088806e-48 | -8.615850e-47 |
| Msa0404880 | Msa0707200 | 0.801702 | 7.947226e-49 | -8.615850e-47 |
| Msa0415760 | Msa0707200 | 0.803479 | 3.418457e-49 | -8.615850e-47 |
| Msa0427230 | Msa0707200 | 0.803343 | 3.646985e-49 | -8.615850e-47 |
| Msa0431560 | Msa0707200 | 0.823177 | 1.593609e-53 | -8.615850e-47 |
| Msa0437820 | Msa0707200 | 0.801143 | 1.034674e-48 | -8.615850e-47 |
| Msa0444770 | Msa0707200 | 0.800638 | 1.312056e-48 | -8.615850e-47 |
| Msa0450890 | Msa0707200 | 0.807313 | 5.371406e-50 | -8.615850e-47 |
| Msa0460510 | Msa0707200 | 0.806128 | 9.560509e-50 | -8.615850e-47 |
| Msa0469770 | Msa0707200 | 0.814596 | 1.421206e-51 | -8.615850e-47 |
| Msa0473740 | Msa0707200 | 0.804527 | 2.069568e-49 | -8.615850e-47 |
| Msa0475700 | Msa0707200 | 0.810498 | 1.118722e-50 | -8.615850e-47 |
| Msa0476570 | Msa0707200 | 0.822464 | 2.335544e-53 | -8.615850e-47 |
| Msa0253230 | Msa0707200 | 0.806336 | 8.644099e-50 | -8.615850e-47 |
| Msa0259450 | Msa0707200 | 0.802409 | 5.688246e-49 | -8.615850e-47 |
| Msa0259570 | Msa0707200 | 0.803969 | 2.704262e-49 | -8.615850e-47 |
| Msa0259770 | Msa0707200 | 0.822232 | 2.644137e-53 | -8.615850e-47 |
| Msa0273780 | Msa0707200 | 0.840429 | 8.745034e-58 | -8.615850e-47 |
| Msa0275250 | Msa0707200 | 0.811199 | 7.887214e-51 | -8.615850e-47 |
| Msa0287480 | Msa0707200 | -0.805491 | 1.301314e-49 | -8.615850e-47 |
| Msa0305440 | Msa0707200 | 0.811111 | 8.243924e-51 | -8.615850e-47 |
| Msa0305630 | Msa0707200 | 0.802366 | 5.804961e-49 | -8.615850e-47 |
| Msa0310260 | Msa0707200 | 0.833311 | 5.736737e-56 | -8.615850e-47 |
| Msa0310270 | Msa0707200 | 0.811734 | 6.037281e-51 | -8.615850e-47 |
| Msa0327990 | Msa0707200 | 0.800152 | 1.648313e-48 | -8.615850e-47 |
| Msa0490740 | Msa0707200 | 0.827995 | 1.149767e-54 | -8.615850e-47 |
| Msa0498250 | Msa0707200 | 0.801066 | 1.072788e-48 | -8.615850e-47 |
| Msa0506700 | Msa0707200 | 0.810584 | 1.071937e-50 | -8.615850e-47 |
| Msa0512930 | Msa0707200 | 0.803564 | 3.283065e-49 | -8.615850e-47 |
| Msa0517820 | Msa0707200 | 0.813990 | 1.935227e-51 | -8.615850e-47 |
| Msa0525180 | Msa0707200 | 0.811018 | 8.634170e-51 | -8.615850e-47 |
| Msa0544390 | Msa0707200 | 0.815062 | 1.120583e-51 | -8.615850e-47 |
| Msa0548420 | Msa0707200 | -0.808945 | 2.413108e-50 | -8.615850e-47 |
| Msa0554700 | Msa0707200 | 0.840520 | 8.276138e-58 | -8.615850e-47 |
| Msa0557440 | Msa0707200 | 0.800666 | 1.295093e-48 | -8.615850e-47 |
| Msa0565370 | Msa0707200 | 0.800396 | 1.469983e-48 | -8.615850e-47 |
| Msa0580890 | Msa0707200 | 0.806082 | 9.775754e-50 | -8.615850e-47 |
| Msa0597370 | Msa0707200 | 0.829312 | 5.523036e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707200 | MtrunA17_Chr8g0388511 | 87.109 | 256 | 33 | 0 | 68 | 323 | 1 | 256 | 4.13e-167 | 470 |
| Msa0707200 | MtrunA17_Chr8g0388531 | 94.667 | 225 | 12 | 0 | 40 | 264 | 1 | 225 | 1.28e-159 | 444 |
| Msa0707200 | MtrunA17_Chr1g0204841 | 72.491 | 269 | 74 | 0 | 55 | 323 | 31 | 299 | 4.09e-144 | 415 |
| Msa0707200 | MtrunA17_Chr8g0388551 | 69.145 | 269 | 31 | 2 | 48 | 316 | 1 | 217 | 2.43e-128 | 369 |
| Msa0707200 | MtrunA17_Chr4g0052121 | 69.697 | 231 | 69 | 1 | 58 | 287 | 31 | 261 | 6.30e-112 | 332 |
| Msa0707200 | MtrunA17_Chr4g0070171 | 52.852 | 263 | 121 | 2 | 63 | 323 | 57 | 318 | 4.43e-89 | 275 |
| Msa0707200 | MtrunA17_Chr2g0301361 | 53.785 | 251 | 115 | 1 | 73 | 323 | 66 | 315 | 9.05e-89 | 274 |
| Msa0707200 | MtrunA17_Chr1g0183091 | 34.866 | 261 | 147 | 4 | 84 | 323 | 37 | 295 | 7.68e-45 | 159 |
| Msa0707200 | MtrunA17_Chr8g0388541 | 89.474 | 57 | 6 | 0 | 269 | 325 | 1 | 57 | 4.17e-31 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0707200 | AT5G46290.3 | 73.485 | 264 | 70 | 0 | 60 | 323 | 37 | 300 | 9.00e-147 | 422 |
| Msa0707200 | AT5G46290.1 | 73.485 | 264 | 70 | 0 | 60 | 323 | 37 | 300 | 9.58e-147 | 422 |
| Msa0707200 | AT5G46290.2 | 56.818 | 264 | 59 | 3 | 60 | 323 | 37 | 245 | 3.04e-96 | 291 |
| Msa0707200 | AT1G74960.1 | 52.000 | 250 | 119 | 1 | 74 | 323 | 120 | 368 | 1.21e-91 | 283 |
| Msa0707200 | AT1G74960.3 | 52.000 | 250 | 119 | 1 | 74 | 323 | 120 | 368 | 1.21e-91 | 283 |
| Msa0707200 | AT1G74960.2 | 52.000 | 250 | 119 | 1 | 74 | 323 | 120 | 368 | 1.21e-91 | 283 |
| Msa0707200 | AT2G04540.1 | 35.385 | 260 | 146 | 6 | 83 | 323 | 30 | 286 | 1.82e-35 | 134 |
Find 211 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAAGGCATTTGCATTCTT+TGG | 0.152289 | 4_4:+80425191 | None:intergenic |
| TCCCTACACCATTCCTAATA+TGG | 0.154721 | 4_4:-80424454 | Msa0707200:CDS |
| TACTTGTTTGTTACCTCTTC+AGG | 0.162638 | 4_4:+80423719 | None:intergenic |
| TAATATGGGTTCTGCTTTAT+TGG | 0.183843 | 4_4:-80424439 | Msa0707200:CDS |
| AGAGAACAATGGGATATTTA+AGG | 0.195028 | 4_4:-80425239 | Msa0707200:CDS |
| CTTGAGCTTGAAATACAATT+AGG | 0.199756 | 4_4:+80422626 | None:intergenic |
| AGGTATCAAATCTATCTATT+AGG | 0.202570 | 4_4:+80424954 | None:intergenic |
| GAGATTTAATTATTTATTTC+CGG | 0.209724 | 4_4:-80425976 | Msa0707200:five_prime_UTR |
| ATGGGTCTTGTGTCAGTATT+TGG | 0.212889 | 4_4:-80425031 | Msa0707200:CDS |
| AAATTGTGTTCATTCAATTA+TGG | 0.236361 | 4_4:+80425605 | None:intergenic |
| TTGGAGCATTCGTTGCTTGC+AGG | 0.238127 | 4_4:-80424260 | Msa0707200:CDS |
| CCACCTTCTCTCTTACTTTC+CGG | 0.240814 | 4_4:-80426234 | Msa0707200:five_prime_UTR |
| TTTCGCTAATTCAATTATTC+AGG | 0.253508 | 4_4:+80425797 | None:intergenic |
| GTTGTTATTAGATTCTTATT+TGG | 0.280804 | 4_4:-80425859 | Msa0707200:five_prime_UTR |
| TTGAAATATTGTTTAGTTGC+AGG | 0.283817 | 4_4:-80424839 | Msa0707200:CDS |
| TCGGATCAAGAAATAAGTTT+AGG | 0.286505 | 4_4:+80426143 | None:intergenic |
| GCAGCTATCTCAAATTCATT+TGG | 0.291309 | 4_4:-80422693 | Msa0707200:intron |
| AAACCCTATTATTTCTATAT+CGG | 0.295795 | 4_4:-80426280 | Msa0707200:five_prime_UTR |
| TTCACCGATATAGAAATAAT+AGG | 0.299203 | 4_4:+80426276 | None:intergenic |
| TCAAGCTTTCCTGCCCGTTT+TGG | 0.299720 | 4_4:-80424932 | Msa0707200:CDS |
| CGGATCAAGAAATAAGTTTA+GGG | 0.302391 | 4_4:+80426144 | None:intergenic |
| CTGCTTCTAATCACATTAGA+AGG | 0.303973 | 4_4:-80424341 | Msa0707200:CDS |
| AGGCAATACATCTTGGTTAA+TGG | 0.308808 | 4_4:+80423141 | None:intergenic |
| AATAAAGCAGAACCCATATT+AGG | 0.313293 | 4_4:+80424441 | None:intergenic |
| AAGGGGTGAAGTAGATATTA+TGG | 0.327341 | 4_4:-80424322 | Msa0707200:CDS |
| TCTTCAAAAGGTTACATTGA+TGG | 0.328774 | 4_4:-80424890 | Msa0707200:CDS |
| GCTTTATTGGCTATAGAAAC+TGG | 0.329983 | 4_4:-80424426 | Msa0707200:CDS |
| GGTATCAAATCTATCTATTA+GGG | 0.331990 | 4_4:+80424955 | None:intergenic |
| CAGCTATCTCAAATTCATTT+GGG | 0.337160 | 4_4:-80422692 | Msa0707200:three_prime_UTR |
| AAAATAATTGCTGAATATTT+GGG | 0.338704 | 4_4:-80423845 | Msa0707200:three_prime_UTR |
| GGCTATAGAAACTGGCCTAA+TGG | 0.341363 | 4_4:-80424418 | Msa0707200:CDS |
| GCAGTAGAAATGGAATAATT+TGG | 0.351291 | 4_4:+80424393 | None:intergenic |
| ATCTCAAATTCATTTGGGTT+TGG | 0.351713 | 4_4:-80422687 | Msa0707200:three_prime_UTR |
| CCCTACACCATTCCTAATAT+GGG | 0.355891 | 4_4:-80424453 | Msa0707200:CDS |
| TGAAGGCATTTGCATTCTTT+GGG | 0.360441 | 4_4:+80425192 | None:intergenic |
| TTGAGCTTGAAATACAATTA+GGG | 0.363991 | 4_4:+80422627 | None:intergenic |
| GCTATAGAAACTGGCCTAAT+GGG | 0.366775 | 4_4:-80424417 | Msa0707200:CDS |
| GCACTTGAAAATGCTAATCT+TGG | 0.372715 | 4_4:-80424809 | Msa0707200:CDS |
| TAAGAGAGAAGGTGGTGGTT+GGG | 0.378970 | 4_4:+80426242 | None:intergenic |
| TGGAATAATTTGGTCCCATT+AGG | 0.388383 | 4_4:+80424403 | None:intergenic |
| TCACCGATATAGAAATAATA+GGG | 0.391833 | 4_4:+80426277 | None:intergenic |
| TTATGCATTTCCACAAAATC+CGG | 0.392793 | 4_4:+80425957 | None:intergenic |
| AAGAGAGAAGGTGGTGGTTG+GGG | 0.394744 | 4_4:+80426243 | None:intergenic |
| TTCACATGCATAACAAATCA+TGG | 0.409811 | 4_4:+80424046 | None:intergenic |
| GGACTAACCTCCACCGCGTC+AGG | 0.411952 | 4_4:-80426093 | Msa0707200:five_prime_UTR |
| CAGATGGACAAAACAAGAAT+AGG | 0.412901 | 4_4:-80424576 | Msa0707200:CDS |
| TTTGTCCTTGGTGAAGGCTC+TGG | 0.413751 | 4_4:-80424171 | Msa0707200:CDS |
| TATTATTCACCATACACCTT+TGG | 0.414910 | 4_4:-80425527 | Msa0707200:five_prime_UTR |
| TGGGTTTGGTGGACATAATT+CGG | 0.417446 | 4_4:-80422673 | Msa0707200:three_prime_UTR |
| GCTTGAGGAAGTAGGTGAAT+TGG | 0.418391 | 4_4:+80425634 | None:intergenic |
| AAATACAATTAGGGTGTGAA+TGG | 0.419188 | 4_4:+80422636 | None:intergenic |
| TATTGGTGCTGCTGGTGGTT+TGG | 0.420179 | 4_4:-80423212 | Msa0707200:three_prime_UTR |
| TTCACCTACTTCCTCAAGCC+TGG | 0.420881 | 4_4:-80425630 | Msa0707200:five_prime_UTR |
| GAAGCTTCACTTATACCTTC+TGG | 0.426530 | 4_4:-80424285 | Msa0707200:CDS |
| TCACTTATACCTTCTGGTGT+TGG | 0.427107 | 4_4:-80424279 | Msa0707200:CDS |
| TCAAATTCATTTGGGTTTGG+TGG | 0.427308 | 4_4:-80422684 | Msa0707200:three_prime_UTR |
| ATATTATTGAGATAAGATAA+TGG | 0.429582 | 4_4:-80423900 | Msa0707200:three_prime_UTR |
| CACAGTGTTTGAATTGCATC+AGG | 0.434262 | 4_4:+80423934 | None:intergenic |
| ACTGCTGGTATATGTCCATT+AGG | 0.436647 | 4_4:-80425286 | Msa0707200:CDS |
| TGGTGAAGGCTCTGGTGTAC+TGG | 0.437806 | 4_4:-80424163 | Msa0707200:CDS |
| GGTCATTGTATTGGTGCTGC+TGG | 0.443878 | 4_4:-80423220 | Msa0707200:three_prime_UTR |
| ATGATGAGCATCACATGTTA+TGG | 0.444772 | 4_4:+80423817 | None:intergenic |
| TTTAGATATGCATCTTATGA+TGG | 0.445117 | 4_4:+80425574 | None:intergenic |
| TGTTTCTGCTTACATCGAAA+AGG | 0.445734 | 4_4:-80424505 | Msa0707200:CDS |
| CTTGCAGGGCTTTGTCTCAA+AGG | 0.446587 | 4_4:-80424245 | Msa0707200:CDS |
| ACTATCAAAGCAATAACAAC+TGG | 0.451059 | 4_4:-80423178 | Msa0707200:three_prime_UTR |
| TCTGTGAGCAATGCTCCTAA+TGG | 0.453396 | 4_4:+80425271 | None:intergenic |
| GCGTATCTGACCACCAAAAC+GGG | 0.453814 | 4_4:+80424919 | None:intergenic |
| GTAGGTGAATTGGAAGTAGA+TGG | 0.454035 | 4_4:+80425644 | None:intergenic |
| AACAAGAGTTTAGAAAATGC+TGG | 0.455134 | 4_4:-80423749 | Msa0707200:three_prime_UTR |
| ACTTGTTTGTTACCTCTTCA+GGG | 0.456962 | 4_4:+80423720 | None:intergenic |
| CATGGTCTTGACGCCCTTCG+AGG | 0.457017 | 4_4:+80424213 | None:intergenic |
| CTAGATCTAGTTAGTGACTT+GGG | 0.460599 | 4_4:-80422580 | Msa0707200:three_prime_UTR |
| ACAAAATCTCAGAGAACAAT+GGG | 0.464965 | 4_4:-80425249 | Msa0707200:CDS |
| GATGGCTTTGTCCTTGGTGA+AGG | 0.465037 | 4_4:-80424177 | Msa0707200:CDS |
| TGAGGTTTATGCAATCAAAC+AGG | 0.469553 | 4_4:-80423394 | Msa0707200:three_prime_UTR |
| AGAAGAAGAAGCGTAGCTAT+TGG | 0.471572 | 4_4:+80426411 | None:intergenic |
| CGCGTATCTGACCACCAAAA+CGG | 0.476881 | 4_4:+80424918 | None:intergenic |
| TTGTTTAGTTGCAGGAAAGA+AGG | 0.478272 | 4_4:-80424831 | Msa0707200:CDS |
| AGAGAGGAGTTCAATGGTGG+TGG | 0.481002 | 4_4:+80426314 | None:intergenic |
| ATTGAAAATGAACGGAACTA+AGG | 0.481055 | 4_4:-80423352 | Msa0707200:intron |
| GAGAGTAGTAATAACAGGAA+TGG | 0.481577 | 4_4:-80425050 | Msa0707200:CDS |
| TGAATGAACACAATTTAGAA+TGG | 0.482061 | 4_4:-80425598 | Msa0707200:five_prime_UTR |
| ATATTTAAGGTTCAGTATGA+AGG | 0.483814 | 4_4:-80425226 | Msa0707200:CDS |
| TCAATGATTGGTCATTGTAT+TGG | 0.483833 | 4_4:-80423229 | Msa0707200:three_prime_UTR |
| ACAAGAGTTTAGAAAATGCT+GGG | 0.485884 | 4_4:-80423748 | Msa0707200:three_prime_UTR |
| CATCGTGATGGCTTTGTCCT+TGG | 0.487779 | 4_4:-80424183 | Msa0707200:CDS |
| AAGAAGGAAAGGATGTGAAA+TGG | 0.488128 | 4_4:+80426035 | None:intergenic |
| CATGCCACATCCACGGTAGC+TGG | 0.488866 | 4_4:-80423426 | Msa0707200:three_prime_UTR |
| AGAGTAGTAATAACAGGAAT+GGG | 0.489390 | 4_4:-80425049 | Msa0707200:CDS |
| TGAACAAAATGAATAATATG+AGG | 0.489760 | 4_4:+80423983 | None:intergenic |
| CGCAATCACGTTTCCCGGCA+CGG | 0.490949 | 4_4:+80426059 | None:intergenic |
| ACACCGGCGACCACCGTGCC+GGG | 0.492566 | 4_4:-80426114 | Msa0707200:five_prime_UTR |
| GTAAGAGAGAAGGTGGTGGT+TGG | 0.493308 | 4_4:+80426241 | None:intergenic |
| ATGACTGATCCAAGGTCTGA+TGG | 0.494024 | 4_4:-80423794 | Msa0707200:three_prime_UTR |
| GACGGTGGAGTAATGGTGGC+TGG | 0.494213 | 4_4:+80426358 | None:intergenic |
| AGGAATCGTCTCCTCCGTGC+CGG | 0.494434 | 4_4:-80426073 | Msa0707200:five_prime_UTR |
| AGAAGGTATAAGTGAAGCTT+CGG | 0.494875 | 4_4:+80424287 | None:intergenic |
| TGGTCGCCGGTGTAAATGTT+CGG | 0.495889 | 4_4:+80426124 | None:intergenic |
| ATACGCGATTTCTCTTCAAA+AGG | 0.496139 | 4_4:-80424902 | Msa0707200:CDS |
| GGAAGGAGAGAGGAGTTCAA+TGG | 0.496191 | 4_4:+80426308 | None:intergenic |
| TAGCATGGTCCAAGACTTTG+AGG | 0.496847 | 4_4:+80425471 | None:intergenic |
| ATAGGAGTTCTAGTTGGATC+AGG | 0.497946 | 4_4:-80424558 | Msa0707200:CDS |
| AGATGGTGGTTCATGGTGGC+CGG | 0.498411 | 4_4:+80426215 | None:intergenic |
| AAGAAGCATGAAGTTAATGT+TGG | 0.500838 | 4_4:-80422799 | Msa0707200:intron |
| AGAAACAGCATCGCTAATAG+TGG | 0.501443 | 4_4:+80424521 | None:intergenic |
| AATACAATTAGGGTGTGAAT+GGG | 0.504951 | 4_4:+80422637 | None:intergenic |
| GTTTCTGCTTACATCGAAAA+GGG | 0.506754 | 4_4:-80424504 | Msa0707200:CDS |
| ATGGTCGCAATCACGTTTCC+CGG | 0.507071 | 4_4:+80426054 | None:intergenic |
| CATAGCATACCTCAAAGTCT+TGG | 0.507630 | 4_4:-80425480 | Msa0707200:five_prime_UTR |
| ATGACATTCATTAGAACTGC+TGG | 0.507733 | 4_4:-80425301 | Msa0707200:CDS |
| TACACCGGCGACCACCGTGC+CGG | 0.508490 | 4_4:-80426115 | Msa0707200:five_prime_UTR |
| CAGGAAATGCAAAACAATCA+AGG | 0.509932 | 4_4:-80425125 | Msa0707200:CDS |
| TGTTGCACAAGCAGTAGAAA+TGG | 0.509995 | 4_4:+80424383 | None:intergenic |
| CACTCTCTCAATAAAAGTGA+GGG | 0.513574 | 4_4:+80422479 | None:intergenic |
| GTCACCAGCTACCGTGGATG+TGG | 0.515201 | 4_4:+80423422 | None:intergenic |
| ACTAGATCTAGTTAGTGACT+TGG | 0.516953 | 4_4:-80422581 | Msa0707200:three_prime_UTR |
| CTTGGGGACACTAGTTCGTA+TGG | 0.517951 | 4_4:-80422563 | Msa0707200:three_prime_UTR |
| GACGCGGTGGAGGTTAGTCC+CGG | 0.520716 | 4_4:+80426096 | None:intergenic |
| AACTCTTATAAATAAGATGT+TGG | 0.522043 | 4_4:+80425503 | None:intergenic |
| AGTCCCGGCACGGTGGTCGC+CGG | 0.522484 | 4_4:+80426111 | None:intergenic |
| CTTAGAGAGTGCAACAAAGA+GGG | 0.523554 | 4_4:-80423873 | Msa0707200:three_prime_UTR |
| ATCCACGGTAGCTGGTGACT+TGG | 0.524496 | 4_4:-80423418 | Msa0707200:three_prime_UTR |
| GGAATCGTCTCCTCCGTGCC+GGG | 0.524944 | 4_4:-80426072 | Msa0707200:five_prime_UTR |
| GAAGTAGATATTATGGTGGT+TGG | 0.525525 | 4_4:-80424315 | Msa0707200:CDS |
| AAGCTTCTAGAGGGAGAAAG+TGG | 0.525564 | 4_4:-80424983 | Msa0707200:CDS |
| GATCCAAGGTCTGATGGACT+TGG | 0.526084 | 4_4:-80423788 | Msa0707200:three_prime_UTR |
| AGTTCTAGTTGGATCAGGAA+TGG | 0.529494 | 4_4:-80424553 | Msa0707200:CDS |
| AATACATCTTGGTTAATGGT+TGG | 0.529999 | 4_4:+80423145 | None:intergenic |
| TGGTGGACATAATTCGGTAG+TGG | 0.531420 | 4_4:-80422667 | Msa0707200:three_prime_UTR |
| CTCGAAGGGCGTCAAGACCA+TGG | 0.531798 | 4_4:-80424212 | Msa0707200:CDS |
| TGGAGCATTCGTTGCTTGCA+GGG | 0.532597 | 4_4:-80424259 | Msa0707200:CDS |
| GGTAGCTGGTGACTTGGCTG+AGG | 0.533259 | 4_4:-80423412 | Msa0707200:three_prime_UTR |
| GACGATTCCTGACGCGGTGG+AGG | 0.539132 | 4_4:+80426086 | None:intergenic |
| ATCTTGATGCTATATGCTAG+TGG | 0.539903 | 4_4:+80425693 | None:intergenic |
| GTTCTAGTTGGATCAGGAAT+GGG | 0.540256 | 4_4:-80424552 | Msa0707200:CDS |
| ACAAGAATAGGAGTTCTAGT+TGG | 0.541196 | 4_4:-80424564 | Msa0707200:CDS |
| AAAGGAATGAAGAGCCTCGA+AGG | 0.545012 | 4_4:-80424227 | Msa0707200:CDS |
| TAAATAAGATGTTGGACCAA+AGG | 0.545055 | 4_4:+80425511 | None:intergenic |
| TGGAATAAACTTATATAGCA+TGG | 0.545989 | 4_4:+80425456 | None:intergenic |
| CTTACATCGAAAAGGGACAT+AGG | 0.549703 | 4_4:-80424497 | Msa0707200:CDS |
| ACCCATATTAGGAATGGTGT+AGG | 0.552852 | 4_4:+80424452 | None:intergenic |
| TCCCCACTTGTATTGCAGCC+AGG | 0.554301 | 4_4:-80425144 | Msa0707200:CDS |
| GACGTCGGACGGTGGAGTAA+TGG | 0.554793 | 4_4:+80426351 | None:intergenic |
| AGGAGAGAGGAGTTCAATGG+TGG | 0.555553 | 4_4:+80426311 | None:intergenic |
| GATGTTGGACCAAAGGTGTA+TGG | 0.557034 | 4_4:+80425518 | None:intergenic |
| GACAAAATCTCAGAGAACAA+TGG | 0.557749 | 4_4:-80425250 | Msa0707200:CDS |
| TGCTTCTAATCACATTAGAA+GGG | 0.558746 | 4_4:-80424340 | Msa0707200:CDS |
| TCAAAGCAATAACAACTGGC+TGG | 0.560724 | 4_4:-80423174 | Msa0707200:three_prime_UTR |
| CATTGTATTGGTGCTGCTGG+TGG | 0.563007 | 4_4:-80423217 | Msa0707200:three_prime_UTR |
| AGCAGAACCCATATTAGGAA+TGG | 0.563834 | 4_4:+80424446 | None:intergenic |
| TGCAACAGTTGGAGAAGCCA+TGG | 0.566301 | 4_4:+80425102 | None:intergenic |
| AGAAGAAGCGTAGCTATTGG+TGG | 0.566316 | 4_4:+80426414 | None:intergenic |
| ATGCAAAACAATCAAGGCCA+TGG | 0.566553 | 4_4:-80425119 | Msa0707200:CDS |
| GCATCAGAATTGAAAATGAA+CGG | 0.567956 | 4_4:-80423360 | Msa0707200:three_prime_UTR |
| AATATGAGGCTATGAGCAGT+TGG | 0.568470 | 4_4:+80423997 | None:intergenic |
| ATCTGACCACCAAAACGGGC+AGG | 0.568503 | 4_4:+80424923 | None:intergenic |
| ATAAAATTTCTGAAACAAGA+TGG | 0.569316 | 4_4:+80424124 | None:intergenic |
| TCGAAGGGCGTCAAGACCAT+GGG | 0.569558 | 4_4:-80424211 | Msa0707200:CDS |
| AGTTCTAATGAATGTCATGT+TGG | 0.569992 | 4_4:+80425306 | None:intergenic |
| ACATTGATGGCAAGAATGAT+CGG | 0.571088 | 4_4:-80424877 | Msa0707200:CDS |
| TCACCTACTTCCTCAAGCCT+GGG | 0.571502 | 4_4:-80425629 | Msa0707200:five_prime_UTR |
| TTCCTGGCTGCAATACAAGT+GGG | 0.577245 | 4_4:+80425142 | None:intergenic |
| CTAGTTGGATCAGGAATGGG+TGG | 0.582826 | 4_4:-80424549 | Msa0707200:CDS |
| CAATTATGGACCCAGGCTTG+AGG | 0.587380 | 4_4:+80425619 | None:intergenic |
| CCATCACGATGTTTGTCCCA+TGG | 0.587755 | 4_4:+80424195 | None:intergenic |
| GTAGATATTATGGTGGTTGG+TGG | 0.588023 | 4_4:-80424312 | Msa0707200:CDS |
| TGCTGGGGTTTCCCCTGAAG+AGG | 0.589497 | 4_4:-80423732 | Msa0707200:intron |
| CTTGTTTGTTACCTCTTCAG+GGG | 0.589612 | 4_4:+80423721 | None:intergenic |
| GGACCCAGGCTTGAGGAAGT+AGG | 0.590740 | 4_4:+80425626 | None:intergenic |
| GCTTAGAGAGTGCAACAAAG+AGG | 0.590788 | 4_4:-80423874 | Msa0707200:three_prime_UTR |
| CCCATATTAGGAATGGTGTA+GGG | 0.591243 | 4_4:+80424453 | None:intergenic |
| GTTCATTCAATTATGGACCC+AGG | 0.592245 | 4_4:+80425612 | None:intergenic |
| TAGATCTAGTTAGTGACTTG+GGG | 0.592637 | 4_4:-80422579 | Msa0707200:three_prime_UTR |
| TGTTGTCATACGACGTCGGA+CGG | 0.594290 | 4_4:+80426340 | None:intergenic |
| TCACATGCATAACAAATCAT+GGG | 0.603811 | 4_4:+80424047 | None:intergenic |
| TCACTCTCTCAATAAAAGTG+AGG | 0.606378 | 4_4:+80422478 | None:intergenic |
| TTTCCTGGCTGCAATACAAG+TGG | 0.609351 | 4_4:+80425141 | None:intergenic |
| GCTTCTTACTAAAACCTCAA+CGG | 0.613749 | 4_4:-80425896 | Msa0707200:five_prime_UTR |
| ACACCAAGTCCATCAGACCT+TGG | 0.614275 | 4_4:+80423785 | None:intergenic |
| AGCCAAGTCACCAGCTACCG+TGG | 0.614633 | 4_4:+80423416 | None:intergenic |
| CTCATCATATGACTGATCCA+AGG | 0.618797 | 4_4:-80423802 | Msa0707200:three_prime_UTR |
| ACGAATGCTCCAACACCAGA+AGG | 0.620048 | 4_4:+80424270 | None:intergenic |
| AAGGAATGAAGAGCCTCGAA+GGG | 0.620476 | 4_4:-80424226 | Msa0707200:CDS |
| GTCGGACGGTGGAGTAATGG+TGG | 0.623437 | 4_4:+80426354 | None:intergenic |
| TTAGAGAGTGCAACAAAGAG+GGG | 0.630279 | 4_4:-80423872 | Msa0707200:three_prime_UTR |
| GGGTGAAGTAGATATTATGG+TGG | 0.632800 | 4_4:-80424319 | Msa0707200:CDS |
| CCGGAAAGTAAGAGAGAAGG+TGG | 0.635455 | 4_4:+80426234 | None:intergenic |
| TTTCAGATGGTGGTTCATGG+TGG | 0.638604 | 4_4:+80426211 | None:intergenic |
| GAATGCTCATGCCACATCCA+CGG | 0.642543 | 4_4:-80423433 | Msa0707200:three_prime_UTR |
| CCATGGGACAAACATCGTGA+TGG | 0.644638 | 4_4:-80424195 | Msa0707200:CDS |
| AAAGTCTAATATATCCGTTG+AGG | 0.644654 | 4_4:+80425882 | None:intergenic |
| CTTGATCCGAACATTTACAC+CGG | 0.648021 | 4_4:-80426130 | Msa0707200:five_prime_UTR |
| GCTTCTAATCACATTAGAAG+GGG | 0.654278 | 4_4:-80424339 | Msa0707200:CDS |
| CAAGAGTTTAGAAAATGCTG+GGG | 0.657781 | 4_4:-80423747 | Msa0707200:three_prime_UTR |
| ATAATTGCTGAATATTTGGG+TGG | 0.660819 | 4_4:-80423842 | Msa0707200:three_prime_UTR |
| TGGCCGGAAAGTAAGAGAGA+AGG | 0.665076 | 4_4:+80426231 | None:intergenic |
| ATACAATTAGGGTGTGAATG+GGG | 0.666411 | 4_4:+80422638 | None:intergenic |
| TGTCATACGACGTCGGACGG+TGG | 0.672002 | 4_4:+80426343 | None:intergenic |
| TCCTGGCTGCAATACAAGTG+GGG | 0.672905 | 4_4:+80425143 | None:intergenic |
| AAAGCATGTATTATGCCCAG+AGG | 0.672979 | 4_4:-80425740 | Msa0707200:five_prime_UTR |
| GGTGGAGGTTAGTCCCGGCA+CGG | 0.673189 | 4_4:+80426101 | None:intergenic |
| GGAGGTTAGTCCCGGCACGG+TGG | 0.674820 | 4_4:+80426104 | None:intergenic |
| AAAACGGGCAGGAAAGCTTG+AGG | 0.675513 | 4_4:+80424934 | None:intergenic |
| GAAAGTAAGAGAGAAGGTGG+TGG | 0.675549 | 4_4:+80426237 | None:intergenic |
| GGAGGAGACGATTCCTGACG+CGG | 0.681480 | 4_4:+80426080 | None:intergenic |
| GGAGACGATTCCTGACGCGG+TGG | 0.712491 | 4_4:+80426083 | None:intergenic |
| AATATTTCAAGCAATCATCG+AGG | 0.755770 | 4_4:+80424852 | None:intergenic |
| GTAGTGTTGTCATACGACGT+CGG | 0.764519 | 4_4:+80426336 | None:intergenic |
| AATCACGTTTCCCGGCACGG+AGG | 0.784112 | 4_4:+80426062 | None:intergenic |
| GTACACCAGAGCCTTCACCA+AGG | 0.794543 | 4_4:+80424166 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAGATTTAATTATTTATTTC+CGG | - | chr4_4:80422922-80422941 | Msa0707200:intron | 15.0% |
| !!! | GAGTTTTAACTTTTAATTAA+AGG | - | chr4_4:80423128-80423147 | Msa0707200:intron | 15.0% |
| !!! | TTTTAACTTTTAATTAAAGG+AGG | - | chr4_4:80423131-80423150 | Msa0707200:intron | 15.0% |
| !!! | AATTTTAGAATACTCAATAA+AGG | - | chr4_4:80423345-80423364 | Msa0707200:intron | 15.0% |
| !!! | AAGTCAAAATTATTTTTTGA+AGG | - | chr4_4:80424133-80424152 | Msa0707200:exon | 15.0% |
| !! | ATATTATTGAGATAAGATAA+TGG | - | chr4_4:80424998-80425017 | Msa0707200:CDS | 15.0% |
| !! | AAAAATAATTGCTGAATATT+TGG | - | chr4_4:80425052-80425071 | Msa0707200:CDS | 15.0% |
| !! | AAAATAATTGCTGAATATTT+GGG | - | chr4_4:80425053-80425072 | Msa0707200:CDS | 15.0% |
| !!! | TGATTAAGTTGTTATTAATT+TGG | + | chr4_4:80425789-80425808 | None:intergenic | 15.0% |
| !!! | AGAAATAATAGGGTTTTAAA+AGG | + | chr4_4:80422614-80422633 | None:intergenic | 20.0% |
| !!! | AAACCCTATTATTTCTATAT+CGG | - | chr4_4:80422618-80422637 | Msa0707200:three_prime_UTR | 20.0% |
| !!! | GTTGTTATTAGATTCTTATT+TGG | - | chr4_4:80423039-80423058 | Msa0707200:intron | 20.0% |
| !! | AAATTGTGTTCATTCAATTA+TGG | + | chr4_4:80423296-80423315 | None:intergenic | 20.0% |
| !! | AACTCTTATAAATAAGATGT+TGG | + | chr4_4:80423398-80423417 | None:intergenic | 20.0% |
| !!! | AATTTTGACTTACATTGTTA+AGG | + | chr4_4:80424124-80424143 | None:intergenic | 20.0% |
| !!! | ATAAAATTTCTGAAACAAGA+TGG | + | chr4_4:80424777-80424796 | None:intergenic | 20.0% |
| !! | TGAACAAAATGAATAATATG+AGG | + | chr4_4:80424918-80424937 | None:intergenic | 20.0% |
| !! | AAACAAGTAATCATTAACAT+CGG | - | chr4_4:80425193-80425212 | Msa0707200:CDS | 20.0% |
| !! | ATTTCAAACATGTACTTAAT+CGG | - | chr4_4:80425366-80425385 | Msa0707200:five_prime_UTR | 20.0% |
| !! | AGTTTAGAAATTAACCAATT+AGG | + | chr4_4:80425428-80425447 | None:intergenic | 20.0% |
| !!! | TTAAGTTGTTATTAATTTGG+TGG | + | chr4_4:80425786-80425805 | None:intergenic | 20.0% |
| !!! | TTTCTTTTATATAAGCTCTA+AGG | - | chr4_4:80425860-80425879 | Msa0707200:five_prime_UTR | 20.0% |
| !!! | ATTTTAAACTGACTTTCATA+AGG | + | chr4_4:80425910-80425929 | None:intergenic | 20.0% |
| !!! | AAATGGATGAAACATATTTT+AGG | + | chr4_4:80425988-80426007 | None:intergenic | 20.0% |
| !!! | AACATTGGTAAAAATTTTGA+AGG | - | chr4_4:80426144-80426163 | Msa0707200:five_prime_UTR | 20.0% |
| !!! | TAATAGTTTTCAAGACATAT+TGG | - | chr4_4:80426393-80426412 | Msa0707200:five_prime_UTR | 20.0% |
| !!! | AATGAAATGCTTATTTTATG+AGG | - | chr4_4:80426443-80426462 | Msa0707200:five_prime_UTR | 20.0% |
| !!! | ATAATAGGGTTTTAAAAGGA+AGG | + | chr4_4:80422610-80422629 | None:intergenic | 25.0% |
| ! | TCACCGATATAGAAATAATA+GGG | + | chr4_4:80422624-80422643 | None:intergenic | 25.0% |
| ! | TTCACCGATATAGAAATAAT+AGG | + | chr4_4:80422625-80422644 | None:intergenic | 25.0% |
| !! | TTATTTATTTCCGGATTTTG+TGG | - | chr4_4:80422931-80422950 | Msa0707200:intron | 25.0% |
| ! | TTTCGCTAATTCAATTATTC+AGG | + | chr4_4:80423104-80423123 | None:intergenic | 25.0% |
| ! | TGAATGAACACAATTTAGAA+TGG | - | chr4_4:80423300-80423319 | Msa0707200:intron | 25.0% |
| ! | TTTAGATATGCATCTTATGA+TGG | + | chr4_4:80423327-80423346 | None:intergenic | 25.0% |
| ! | TGGAATAAACTTATATAGCA+TGG | + | chr4_4:80423445-80423464 | None:intergenic | 25.0% |
| !!! | ATGCTATTTTTTAAAGCAAG+GGG | + | chr4_4:80423539-80423558 | None:intergenic | 25.0% |
| !!! | GATGCTATTTTTTAAAGCAA+GGG | + | chr4_4:80423540-80423559 | None:intergenic | 25.0% |
| !!! | TGATGCTATTTTTTAAAGCA+AGG | + | chr4_4:80423541-80423560 | None:intergenic | 25.0% |
| !! | ATATTTAAGGTTCAGTATGA+AGG | - | chr4_4:80423672-80423691 | Msa0707200:intron | 25.0% |
| !!! | GTTATTACTACTCTCTTTTT+TGG | + | chr4_4:80423843-80423862 | None:intergenic | 25.0% |
| ! | AAAAAGAGAGTAGTAATAAC+AGG | - | chr4_4:80423843-80423862 | Msa0707200:three_prime_UTR | 25.0% |
| ! | GGTATCAAATCTATCTATTA+GGG | + | chr4_4:80423946-80423965 | None:intergenic | 25.0% |
| ! | AGGTATCAAATCTATCTATT+AGG | + | chr4_4:80423947-80423966 | None:intergenic | 25.0% |
| ! | TTGAAATATTGTTTAGTTGC+AGG | - | chr4_4:80424059-80424078 | Msa0707200:three_prime_UTR | 25.0% |
| ! | GTATACATTAAATCTTAAGC+TGG | - | chr4_4:80424211-80424230 | Msa0707200:CDS | 25.0% |
| ! | TGTTAGAACAACAACAATTT+CGG | + | chr4_4:80424304-80424323 | None:intergenic | 25.0% |
| ! | AACAAGTAATCATTAACATC+GGG | - | chr4_4:80425194-80425213 | Msa0707200:CDS | 25.0% |
| !!! | TAAAGTTGATGAATCCTAAT+TGG | - | chr4_4:80425411-80425430 | Msa0707200:five_prime_UTR | 25.0% |
| ! | GGTTAATTTCTAAACTGTAA+AGG | - | chr4_4:80425432-80425451 | Msa0707200:five_prime_UTR | 25.0% |
| !!! | TTCTTTTTTCAGTCAATGAT+TGG | - | chr4_4:80425657-80425676 | Msa0707200:five_prime_UTR | 25.0% |
| !! | TTTGTTTGAATTTGCGTTTT+TGG | + | chr4_4:80425965-80425984 | None:intergenic | 25.0% |
| !! | CATGCTTCTTTTTAACATTA+GGG | + | chr4_4:80426089-80426108 | None:intergenic | 25.0% |
| !! | TCATGCTTCTTTTTAACATT+AGG | + | chr4_4:80426090-80426109 | None:intergenic | 25.0% |
| ! | TTGAGCTTGAAATACAATTA+GGG | + | chr4_4:80426274-80426293 | None:intergenic | 25.0% |
| ! | TAAGTTTAGGGATTTTGTTG+CGG | + | chr4_4:80422745-80422764 | None:intergenic | 30.0% |
| CGGATCAAGAAATAAGTTTA+GGG | + | chr4_4:80422757-80422776 | None:intergenic | 30.0% | |
| TCGGATCAAGAAATAAGTTT+AGG | + | chr4_4:80422758-80422777 | None:intergenic | 30.0% | |
| AATGAAACTCACCAAAAAGA+AGG | + | chr4_4:80422882-80422901 | None:intergenic | 30.0% | |
| TTATGCATTTCCACAAAATC+CGG | + | chr4_4:80422944-80422963 | None:intergenic | 30.0% | |
| AAAGTCTAATATATCCGTTG+AGG | + | chr4_4:80423019-80423038 | None:intergenic | 30.0% | |
| TCTCTCTATTAAAAACCTCT+GGG | + | chr4_4:80423176-80423195 | None:intergenic | 30.0% | |
| TATTATTCACCATACACCTT+TGG | - | chr4_4:80423371-80423390 | Msa0707200:three_prime_UTR | 30.0% | |
| TAAATAAGATGTTGGACCAA+AGG | + | chr4_4:80423390-80423409 | None:intergenic | 30.0% | |
| ! | TTTTTCTTCTCAACAAGTCT+TGG | + | chr4_4:80423465-80423484 | None:intergenic | 30.0% |
| ! | AGTTCTAATGAATGTCATGT+TGG | + | chr4_4:80423595-80423614 | None:intergenic | 30.0% |
| ACAAAATCTCAGAGAACAAT+GGG | - | chr4_4:80423649-80423668 | Msa0707200:intron | 30.0% | |
| AGAGAACAATGGGATATTTA+AGG | - | chr4_4:80423659-80423678 | Msa0707200:intron | 30.0% | |
| ! | TTTGGATCTTTCTCTCTTTT+AGG | + | chr4_4:80423825-80423844 | None:intergenic | 30.0% |
| AGAGTAGTAATAACAGGAAT+GGG | - | chr4_4:80423849-80423868 | Msa0707200:three_prime_UTR | 30.0% | |
| ! | ATTTTACAACAAGCTTCTAG+AGG | - | chr4_4:80423905-80423924 | Msa0707200:three_prime_UTR | 30.0% |
| ! | TTTTACAACAAGCTTCTAGA+GGG | - | chr4_4:80423906-80423925 | Msa0707200:three_prime_UTR | 30.0% |
| TCTTCAAAAGGTTACATTGA+TGG | - | chr4_4:80424008-80424027 | Msa0707200:three_prime_UTR | 30.0% | |
| AATATTTCAAGCAATCATCG+AGG | + | chr4_4:80424049-80424068 | None:intergenic | 30.0% | |
| TAACTATGAGTCATACTCAT+TGG | + | chr4_4:80424161-80424180 | None:intergenic | 30.0% | |
| TTAAGCTGGAAATAACAGAA+AGG | - | chr4_4:80424225-80424244 | Msa0707200:CDS | 30.0% | |
| ! | ATTGTTGTTGTTCTAACAGA+TGG | - | chr4_4:80424306-80424325 | Msa0707200:CDS | 30.0% |
| ATGGTGTAGGGAAAAAAAAA+TGG | + | chr4_4:80424436-80424455 | None:intergenic | 30.0% | |
| AATAAAGCAGAACCCATATT+AGG | + | chr4_4:80424460-80424479 | None:intergenic | 30.0% | |
| TAATATGGGTTCTGCTTTAT+TGG | - | chr4_4:80424459-80424478 | Msa0707200:CDS | 30.0% | |
| GCAGTAGAAATGGAATAATT+TGG | + | chr4_4:80424508-80424527 | None:intergenic | 30.0% | |
| TGCTTCTAATCACATTAGAA+GGG | - | chr4_4:80424558-80424577 | Msa0707200:CDS | 30.0% | |
| TCACATGCATAACAAATCAT+GGG | + | chr4_4:80424854-80424873 | None:intergenic | 30.0% | |
| TTCACATGCATAACAAATCA+TGG | + | chr4_4:80424855-80424874 | None:intergenic | 30.0% | |
| ATAATTGCTGAATATTTGGG+TGG | - | chr4_4:80425056-80425075 | Msa0707200:CDS | 30.0% | |
| AACAAGAGTTTAGAAAATGC+TGG | - | chr4_4:80425149-80425168 | Msa0707200:CDS | 30.0% | |
| ACAAGAGTTTAGAAAATGCT+GGG | - | chr4_4:80425150-80425169 | Msa0707200:CDS | 30.0% | |
| CTTAGTACATGTTTAGATTG+CGG | - | chr4_4:80425230-80425249 | Msa0707200:CDS | 30.0% | |
| ! | CAGTTTTTGCCAAAATATCA+CGG | + | chr4_4:80425280-80425299 | None:intergenic | 30.0% |
| ! | TTTTGGCAAAAACTGCATTT+TGG | - | chr4_4:80425285-80425304 | Msa0707200:CDS | 30.0% |
| ATGAAATGAAATCAGTGTCA+CGG | - | chr4_4:80425315-80425334 | Msa0707200:exon | 30.0% | |
| GCATCAGAATTGAAAATGAA+CGG | - | chr4_4:80425538-80425557 | Msa0707200:five_prime_UTR | 30.0% | |
| ATTGAAAATGAACGGAACTA+AGG | - | chr4_4:80425546-80425565 | Msa0707200:five_prime_UTR | 30.0% | |
| ATCCATAAAAGGATGTTGTT+GGG | + | chr4_4:80425612-80425631 | None:intergenic | 30.0% | |
| ! | TCAATGATTGGTCATTGTAT+TGG | - | chr4_4:80425669-80425688 | Msa0707200:five_prime_UTR | 30.0% |
| ACTATCAAAGCAATAACAAC+TGG | - | chr4_4:80425720-80425739 | Msa0707200:five_prime_UTR | 30.0% | |
| AATACATCTTGGTTAATGGT+TGG | + | chr4_4:80425756-80425775 | None:intergenic | 30.0% | |
| ! | TGTTATTAATTTGGTGGTCA+AGG | + | chr4_4:80425780-80425799 | None:intergenic | 30.0% |
| AAGATTGTATGAGAGTGAAA+TGG | + | chr4_4:80426005-80426024 | None:intergenic | 30.0% | |
| ! | AAGAAGCATGAAGTTAATGT+TGG | - | chr4_4:80426099-80426118 | Msa0707200:five_prime_UTR | 30.0% |
| TGAAGTTAATGTTGGTATGT+AGG | - | chr4_4:80426107-80426126 | Msa0707200:five_prime_UTR | 30.0% | |
| CAGCTATCTCAAATTCATTT+GGG | - | chr4_4:80426206-80426225 | Msa0707200:five_prime_UTR | 30.0% | |
| ! | ATCTCAAATTCATTTGGGTT+TGG | - | chr4_4:80426211-80426230 | Msa0707200:five_prime_UTR | 30.0% |
| AATACAATTAGGGTGTGAAT+GGG | + | chr4_4:80426264-80426283 | None:intergenic | 30.0% | |
| AAATACAATTAGGGTGTGAA+TGG | + | chr4_4:80426265-80426284 | None:intergenic | 30.0% | |
| CTTGAGCTTGAAATACAATT+AGG | + | chr4_4:80426275-80426294 | None:intergenic | 30.0% | |
| AAGAAGGAAAGGATGTGAAA+TGG | + | chr4_4:80422866-80422885 | None:intergenic | 35.0% | |
| ! | TCACATCCTTTCCTTCTTTT+TGG | - | chr4_4:80422868-80422887 | Msa0707200:intron | 35.0% |
| AACTCACCAAAAAGAAGGAA+AGG | + | chr4_4:80422877-80422896 | None:intergenic | 35.0% | |
| GCTTCTTACTAAAACCTCAA+CGG | - | chr4_4:80423002-80423021 | Msa0707200:intron | 35.0% | |
| CTCTCTCTATTAAAAACCTC+TGG | + | chr4_4:80423177-80423196 | None:intergenic | 35.0% | |
| ! | CAGAGGTTTTTAATAGAGAG+AGG | - | chr4_4:80423175-80423194 | Msa0707200:three_prime_UTR | 35.0% |
| ATCTTGATGCTATATGCTAG+TGG | + | chr4_4:80423208-80423227 | None:intergenic | 35.0% | |
| ATGACATTCATTAGAACTGC+TGG | - | chr4_4:80423597-80423616 | Msa0707200:intron | 35.0% | |
| GACAAAATCTCAGAGAACAA+TGG | - | chr4_4:80423648-80423667 | Msa0707200:intron | 35.0% | |
| !! | TGAAGGCATTTGCATTCTTT+GGG | + | chr4_4:80423709-80423728 | None:intergenic | 35.0% |
| !! | CTTGATTGTTTTGCATTTCC+TGG | + | chr4_4:80423775-80423794 | None:intergenic | 35.0% |
| CAGGAAATGCAAAACAATCA+AGG | - | chr4_4:80423773-80423792 | Msa0707200:three_prime_UTR | 35.0% | |
| GAGAGTAGTAATAACAGGAA+TGG | - | chr4_4:80423848-80423867 | Msa0707200:three_prime_UTR | 35.0% | |
| ATACGCGATTTCTCTTCAAA+AGG | - | chr4_4:80423996-80424015 | Msa0707200:three_prime_UTR | 35.0% | |
| ! | ACATTGATGGCAAGAATGAT+CGG | - | chr4_4:80424021-80424040 | Msa0707200:three_prime_UTR | 35.0% |
| TTGTTTAGTTGCAGGAAAGA+AGG | - | chr4_4:80424067-80424086 | Msa0707200:three_prime_UTR | 35.0% | |
| GCACTTGAAAATGCTAATCT+TGG | - | chr4_4:80424089-80424108 | Msa0707200:three_prime_UTR | 35.0% | |
| CAGATGGACAAAACAAGAAT+AGG | - | chr4_4:80424322-80424341 | Msa0707200:CDS | 35.0% | |
| ! | ACAAGAATAGGAGTTCTAGT+TGG | - | chr4_4:80424334-80424353 | Msa0707200:CDS | 35.0% |
| ! | TGTTTCTGCTTACATCGAAA+AGG | - | chr4_4:80424393-80424412 | Msa0707200:CDS | 35.0% |
| GTTTCTGCTTACATCGAAAA+GGG | - | chr4_4:80424394-80424413 | Msa0707200:CDS | 35.0% | |
| ! | GCTTTATTGGCTATAGAAAC+TGG | - | chr4_4:80424472-80424491 | Msa0707200:CDS | 35.0% |
| TGGAATAATTTGGTCCCATT+AGG | + | chr4_4:80424498-80424517 | None:intergenic | 35.0% | |
| CTGCTTCTAATCACATTAGA+AGG | - | chr4_4:80424557-80424576 | Msa0707200:CDS | 35.0% | |
| GCTTCTAATCACATTAGAAG+GGG | - | chr4_4:80424559-80424578 | Msa0707200:CDS | 35.0% | |
| AAGGGGTGAAGTAGATATTA+TGG | - | chr4_4:80424576-80424595 | Msa0707200:CDS | 35.0% | |
| GAAGTAGATATTATGGTGGT+TGG | - | chr4_4:80424583-80424602 | Msa0707200:intron | 35.0% | |
| ! | AGAAGGTATAAGTGAAGCTT+CGG | + | chr4_4:80424614-80424633 | None:intergenic | 35.0% |
| ATGATGAGCATCACATGTTA+TGG | + | chr4_4:80425084-80425103 | None:intergenic | 35.0% | |
| CAAGAGTTTAGAAAATGCTG+GGG | - | chr4_4:80425151-80425170 | Msa0707200:CDS | 35.0% | |
| ! | ACTTGTTTGTTACCTCTTCA+GGG | + | chr4_4:80425181-80425200 | None:intergenic | 35.0% |
| ! | TACTTGTTTGTTACCTCTTC+AGG | + | chr4_4:80425182-80425201 | None:intergenic | 35.0% |
| TGAGGTTTATGCAATCAAAC+AGG | - | chr4_4:80425504-80425523 | Msa0707200:five_prime_UTR | 35.0% | |
| ! | TGCAATCAAACAGGTTTTCA+AGG | - | chr4_4:80425513-80425532 | Msa0707200:five_prime_UTR | 35.0% |
| TCCATAAAAGGATGTTGTTG+GGG | + | chr4_4:80425611-80425630 | None:intergenic | 35.0% | |
| GATCCATAAAAGGATGTTGT+TGG | + | chr4_4:80425613-80425632 | None:intergenic | 35.0% | |
| TAAGCTTCACGATCCATAAA+AGG | + | chr4_4:80425623-80425642 | None:intergenic | 35.0% | |
| AGGCAATACATCTTGGTTAA+TGG | + | chr4_4:80425760-80425779 | None:intergenic | 35.0% | |
| !!! | CTACTTTTTTCCACAGAACT+TGG | - | chr4_4:80426038-80426057 | Msa0707200:five_prime_UTR | 35.0% |
| TTTACCAATGTTCACACCAA+AGG | + | chr4_4:80426136-80426155 | None:intergenic | 35.0% | |
| GCAGCTATCTCAAATTCATT+TGG | - | chr4_4:80426205-80426224 | Msa0707200:five_prime_UTR | 35.0% | |
| ! | TCAAATTCATTTGGGTTTGG+TGG | - | chr4_4:80426214-80426233 | Msa0707200:five_prime_UTR | 35.0% |
| ATACAATTAGGGTGTGAATG+GGG | + | chr4_4:80426263-80426282 | None:intergenic | 35.0% | |
| ACTAGATCTAGTTAGTGACT+TGG | - | chr4_4:80426317-80426336 | Msa0707200:five_prime_UTR | 35.0% | |
| CTAGATCTAGTTAGTGACTT+GGG | - | chr4_4:80426318-80426337 | Msa0707200:five_prime_UTR | 35.0% | |
| TAGATCTAGTTAGTGACTTG+GGG | - | chr4_4:80426319-80426338 | Msa0707200:five_prime_UTR | 35.0% | |
| CACTCTCTCAATAAAAGTGA+GGG | + | chr4_4:80426422-80426441 | None:intergenic | 35.0% | |
| TCACTCTCTCAATAAAAGTG+AGG | + | chr4_4:80426423-80426442 | None:intergenic | 35.0% | |
| TGGTGGAAAACAAAAACACG+TGG | + | chr4_4:80422470-80422489 | None:intergenic | 40.0% | |
| ! | AGAAGAAGAAGCGTAGCTAT+TGG | + | chr4_4:80422490-80422509 | None:intergenic | 40.0% |
| ! | TAATGGTGGCTGGAAGTTTT+TGG | + | chr4_4:80422533-80422552 | None:intergenic | 40.0% |
| !!! | GGTTTTAAAAGGAAGGAGAG+AGG | + | chr4_4:80422603-80422622 | None:intergenic | 40.0% |
| !! | GTTTTTCAGATGGTGGTTCA+TGG | + | chr4_4:80422693-80422712 | None:intergenic | 40.0% |
| !!! | GCGTTTAGTTTTTCAGATGG+TGG | + | chr4_4:80422700-80422719 | None:intergenic | 40.0% |
| !!! | GGTGCGTTTAGTTTTTCAGA+TGG | + | chr4_4:80422703-80422722 | None:intergenic | 40.0% |
| GGACATCACAAGGAAAAAGA+TGG | + | chr4_4:80422724-80422743 | None:intergenic | 40.0% | |
| ! | ATTTTGTTGCGGACATCACA+AGG | + | chr4_4:80422734-80422753 | None:intergenic | 40.0% |
| CTTGATCCGAACATTTACAC+CGG | - | chr4_4:80422768-80422787 | Msa0707200:intron | 40.0% | |
| AAAGCATGTATTATGCCCAG+AGG | - | chr4_4:80423158-80423177 | Msa0707200:three_prime_UTR | 40.0% | |
| GTAGGTGAATTGGAAGTAGA+TGG | + | chr4_4:80423257-80423276 | None:intergenic | 40.0% | |
| GTTCATTCAATTATGGACCC+AGG | + | chr4_4:80423289-80423308 | None:intergenic | 40.0% | |
| CATAGCATACCTCAAAGTCT+TGG | - | chr4_4:80423418-80423437 | Msa0707200:three_prime_UTR | 40.0% | |
| TCTCTCTCTCTCAAAAAGGA+AGG | + | chr4_4:80423567-80423586 | None:intergenic | 40.0% | |
| TCTCTCTCTCTCTCTCAAAA+AGG | + | chr4_4:80423571-80423590 | None:intergenic | 40.0% | |
| ACTGCTGGTATATGTCCATT+AGG | - | chr4_4:80423612-80423631 | Msa0707200:intron | 40.0% | |
| !! | CTGAAGGCATTTGCATTCTT+TGG | + | chr4_4:80423710-80423729 | None:intergenic | 40.0% |
| ATGCAAAACAATCAAGGCCA+TGG | - | chr4_4:80423779-80423798 | Msa0707200:three_prime_UTR | 40.0% | |
| ! | ATGGGTCTTGTGTCAGTATT+TGG | - | chr4_4:80423867-80423886 | Msa0707200:three_prime_UTR | 40.0% |
| AACAGAAAGGAACTGCAATC+AGG | - | chr4_4:80424238-80424257 | Msa0707200:CDS | 40.0% | |
| ACAGAAAGGAACTGCAATCA+GGG | - | chr4_4:80424239-80424258 | Msa0707200:CDS | 40.0% | |
| ! | ATAGGAGTTCTAGTTGGATC+AGG | - | chr4_4:80424340-80424359 | Msa0707200:CDS | 40.0% |
| ! | AGTTCTAGTTGGATCAGGAA+TGG | - | chr4_4:80424345-80424364 | Msa0707200:CDS | 40.0% |
| ! | GTTCTAGTTGGATCAGGAAT+GGG | - | chr4_4:80424346-80424365 | Msa0707200:CDS | 40.0% |
| AGAAACAGCATCGCTAATAG+TGG | + | chr4_4:80424380-80424399 | None:intergenic | 40.0% | |
| CTTACATCGAAAAGGGACAT+AGG | - | chr4_4:80424401-80424420 | Msa0707200:CDS | 40.0% | |
| TCCCTACACCATTCCTAATA+TGG | - | chr4_4:80424444-80424463 | Msa0707200:CDS | 40.0% | |
| CCCATATTAGGAATGGTGTA+GGG | + | chr4_4:80424448-80424467 | None:intergenic | 40.0% | |
| CCCTACACCATTCCTAATAT+GGG | - | chr4_4:80424445-80424464 | Msa0707200:CDS | 40.0% | |
| ACCCATATTAGGAATGGTGT+AGG | + | chr4_4:80424449-80424468 | None:intergenic | 40.0% | |
| AGCAGAACCCATATTAGGAA+TGG | + | chr4_4:80424455-80424474 | None:intergenic | 40.0% | |
| ! | GCTATAGAAACTGGCCTAAT+GGG | - | chr4_4:80424481-80424500 | Msa0707200:CDS | 40.0% |
| TGTTGCACAAGCAGTAGAAA+TGG | + | chr4_4:80424518-80424537 | None:intergenic | 40.0% | |
| GGGTGAAGTAGATATTATGG+TGG | - | chr4_4:80424579-80424598 | Msa0707200:intron | 40.0% | |
| GTAGATATTATGGTGGTTGG+TGG | - | chr4_4:80424586-80424605 | Msa0707200:intron | 40.0% | |
| GAAGCTTCACTTATACCTTC+TGG | - | chr4_4:80424613-80424632 | Msa0707200:intron | 40.0% | |
| TCACTTATACCTTCTGGTGT+TGG | - | chr4_4:80424619-80424638 | Msa0707200:intron | 40.0% | |
| AATATGAGGCTATGAGCAGT+TGG | + | chr4_4:80424904-80424923 | None:intergenic | 40.0% | |
| CACAGTGTTTGAATTGCATC+AGG | + | chr4_4:80424967-80424986 | None:intergenic | 40.0% | |
| ! | CTTAGAGAGTGCAACAAAGA+GGG | - | chr4_4:80425025-80425044 | Msa0707200:CDS | 40.0% |
| ! | TTAGAGAGTGCAACAAAGAG+GGG | - | chr4_4:80425026-80425045 | Msa0707200:CDS | 40.0% |
| CTCATCATATGACTGATCCA+AGG | - | chr4_4:80425096-80425115 | Msa0707200:CDS | 40.0% | |
| ! | CTTGTTTGTTACCTCTTCAG+GGG | + | chr4_4:80425180-80425199 | None:intergenic | 40.0% |
| ATGTTTAGATTGCGGTGAGT+TGG | - | chr4_4:80425238-80425257 | Msa0707200:CDS | 40.0% | |
| ! | ACCCCAACAACATCCTTTTA+TGG | - | chr4_4:80425607-80425626 | Msa0707200:five_prime_UTR | 40.0% |
| TCAAAGCAATAACAACTGGC+TGG | - | chr4_4:80425724-80425743 | Msa0707200:five_prime_UTR | 40.0% | |
| !!! | CTTTTTTCCACAGAACTTGG+AGG | - | chr4_4:80426041-80426060 | Msa0707200:five_prime_UTR | 40.0% |
| !! | TGGGTTTGGTGGACATAATT+CGG | - | chr4_4:80426225-80426244 | Msa0707200:five_prime_UTR | 40.0% |
| ! | AGAAGAAGCGTAGCTATTGG+TGG | + | chr4_4:80422487-80422506 | None:intergenic | 45.0% |
| !!! | TTTTGGTGGTGGTGGTGATT+GGG | + | chr4_4:80422516-80422535 | None:intergenic | 45.0% |
| !!! | TTTTTGGTGGTGGTGGTGAT+TGG | + | chr4_4:80422517-80422536 | None:intergenic | 45.0% |
| GTAGTGTTGTCATACGACGT+CGG | + | chr4_4:80422565-80422584 | None:intergenic | 45.0% | |
| ! | TAAGAGAGAAGGTGGTGGTT+GGG | + | chr4_4:80422659-80422678 | None:intergenic | 45.0% |
| GAAAGTAAGAGAGAAGGTGG+TGG | + | chr4_4:80422664-80422683 | None:intergenic | 45.0% | |
| CCACCTTCTCTCTTACTTTC+CGG | - | chr4_4:80422664-80422683 | Msa0707200:three_prime_UTR | 45.0% | |
| ! | TTTCAGATGGTGGTTCATGG+TGG | + | chr4_4:80422690-80422709 | None:intergenic | 45.0% |
| GCTTGAGGAAGTAGGTGAAT+TGG | + | chr4_4:80423267-80423286 | None:intergenic | 45.0% | |
| ! | GATGTTGGACCAAAGGTGTA+TGG | + | chr4_4:80423383-80423402 | None:intergenic | 45.0% |
| TAGCATGGTCCAAGACTTTG+AGG | + | chr4_4:80423430-80423449 | None:intergenic | 45.0% | |
| TCTGTGAGCAATGCTCCTAA+TGG | + | chr4_4:80423630-80423649 | None:intergenic | 45.0% | |
| ! | TTTTGCATGCATGCAGCTGA+AGG | + | chr4_4:80423726-80423745 | None:intergenic | 45.0% |
| TTCCTGGCTGCAATACAAGT+GGG | + | chr4_4:80423759-80423778 | None:intergenic | 45.0% | |
| TTTCCTGGCTGCAATACAAG+TGG | + | chr4_4:80423760-80423779 | None:intergenic | 45.0% | |
| !! | CTTTTAGGAGCTGCAACAGT+TGG | + | chr4_4:80423810-80423829 | None:intergenic | 45.0% |
| ! | AAGCTTCTAGAGGGAGAAAG+TGG | - | chr4_4:80423915-80423934 | Msa0707200:three_prime_UTR | 45.0% |
| CAGAAAGGAACTGCAATCAG+GGG | - | chr4_4:80424240-80424259 | Msa0707200:CDS | 45.0% | |
| ! | GGCTATAGAAACTGGCCTAA+TGG | - | chr4_4:80424480-80424499 | Msa0707200:CDS | 45.0% |
| AAAGGAATGAAGAGCCTCGA+AGG | - | chr4_4:80424671-80424690 | Msa0707200:intron | 45.0% | |
| AAGGAATGAAGAGCCTCGAA+GGG | - | chr4_4:80424672-80424691 | Msa0707200:intron | 45.0% | |
| ! | GCTTAGAGAGTGCAACAAAG+AGG | - | chr4_4:80425024-80425043 | Msa0707200:CDS | 45.0% |
| ATGACTGATCCAAGGTCTGA+TGG | - | chr4_4:80425104-80425123 | Msa0707200:CDS | 45.0% | |
| ! | CACGGTGTACCGTGATATTT+TGG | - | chr4_4:80425268-80425287 | Msa0707200:CDS | 45.0% |
| GTGGTCAAGGCAATACATCT+TGG | + | chr4_4:80425767-80425786 | None:intergenic | 45.0% | |
| ! | TTTTCCACAGAACTTGGAGG+AGG | - | chr4_4:80426044-80426063 | Msa0707200:five_prime_UTR | 45.0% |
| GTTGGTATGTAGGTTGCCTT+TGG | - | chr4_4:80426117-80426136 | Msa0707200:five_prime_UTR | 45.0% | |
| ! | GTTGCCTTTGGTGTGAACAT+TGG | - | chr4_4:80426129-80426148 | Msa0707200:five_prime_UTR | 45.0% |
| ! | TGGTGGACATAATTCGGTAG+TGG | - | chr4_4:80426231-80426250 | Msa0707200:five_prime_UTR | 45.0% |
| !!! | CTGGAAGTTTTTGGTGGTGG+TGG | + | chr4_4:80422524-80422543 | None:intergenic | 50.0% |
| !!! | TGGCTGGAAGTTTTTGGTGG+TGG | + | chr4_4:80422527-80422546 | None:intergenic | 50.0% |
| !! | TGGTGGCTGGAAGTTTTTGG+TGG | + | chr4_4:80422530-80422549 | None:intergenic | 50.0% |
| TGTTGTCATACGACGTCGGA+CGG | + | chr4_4:80422561-80422580 | None:intergenic | 50.0% | |
| AGAGAGGAGTTCAATGGTGG+TGG | + | chr4_4:80422587-80422606 | None:intergenic | 50.0% | |
| AGGAGAGAGGAGTTCAATGG+TGG | + | chr4_4:80422590-80422609 | None:intergenic | 50.0% | |
| GGAAGGAGAGAGGAGTTCAA+TGG | + | chr4_4:80422593-80422612 | None:intergenic | 50.0% | |
| ! | AAGAGAGAAGGTGGTGGTTG+GGG | + | chr4_4:80422658-80422677 | None:intergenic | 50.0% |
| ! | GTAAGAGAGAAGGTGGTGGT+TGG | + | chr4_4:80422660-80422679 | None:intergenic | 50.0% |
| CCGGAAAGTAAGAGAGAAGG+TGG | + | chr4_4:80422667-80422686 | None:intergenic | 50.0% | |
| TGGCCGGAAAGTAAGAGAGA+AGG | + | chr4_4:80422670-80422689 | None:intergenic | 50.0% | |
| TGGTCGCCGGTGTAAATGTT+CGG | + | chr4_4:80422777-80422796 | None:intergenic | 50.0% | |
| ATGGTCGCAATCACGTTTCC+CGG | + | chr4_4:80422847-80422866 | None:intergenic | 50.0% | |
| TTCACCTACTTCCTCAAGCC+TGG | - | chr4_4:80423268-80423287 | Msa0707200:intron | 50.0% | |
| TCACCTACTTCCTCAAGCCT+GGG | - | chr4_4:80423269-80423288 | Msa0707200:intron | 50.0% | |
| CAATTATGGACCCAGGCTTG+AGG | + | chr4_4:80423282-80423301 | None:intergenic | 50.0% | |
| TCCTGGCTGCAATACAAGTG+GGG | + | chr4_4:80423758-80423777 | None:intergenic | 50.0% | |
| TGCAACAGTTGGAGAAGCCA+TGG | + | chr4_4:80423799-80423818 | None:intergenic | 50.0% | |
| AAAACGGGCAGGAAAGCTTG+AGG | + | chr4_4:80423967-80423986 | None:intergenic | 50.0% | |
| ! | TCAAGCTTTCCTGCCCGTTT+TGG | - | chr4_4:80423966-80423985 | Msa0707200:three_prime_UTR | 50.0% |
| GCGTATCTGACCACCAAAAC+GGG | + | chr4_4:80423982-80424001 | None:intergenic | 50.0% | |
| CGCGTATCTGACCACCAAAA+CGG | + | chr4_4:80423983-80424002 | None:intergenic | 50.0% | |
| CTAGTTGGATCAGGAATGGG+TGG | - | chr4_4:80424349-80424368 | Msa0707200:CDS | 50.0% | |
| ACGAATGCTCCAACACCAGA+AGG | + | chr4_4:80424631-80424650 | None:intergenic | 50.0% | |
| ! | TTGGAGCATTCGTTGCTTGC+AGG | - | chr4_4:80424638-80424657 | Msa0707200:intron | 50.0% |
| ! | TGGAGCATTCGTTGCTTGCA+GGG | - | chr4_4:80424639-80424658 | Msa0707200:intron | 50.0% |
| ! | CTTGCAGGGCTTTGTCTCAA+AGG | - | chr4_4:80424653-80424672 | Msa0707200:intron | 50.0% |
| CCATCACGATGTTTGTCCCA+TGG | + | chr4_4:80424706-80424725 | None:intergenic | 50.0% | |
| CCATGGGACAAACATCGTGA+TGG | - | chr4_4:80424703-80424722 | Msa0707200:intron | 50.0% | |
| !! | CATCGTGATGGCTTTGTCCT+TGG | - | chr4_4:80424715-80424734 | Msa0707200:intron | 50.0% |
| !! | GATGGCTTTGTCCTTGGTGA+AGG | - | chr4_4:80424721-80424740 | Msa0707200:intron | 50.0% |
| TTTGTCCTTGGTGAAGGCTC+TGG | - | chr4_4:80424727-80424746 | Msa0707200:intron | 50.0% | |
| !! | GATCCAAGGTCTGATGGACT+TGG | - | chr4_4:80425110-80425129 | Msa0707200:CDS | 50.0% |
| ACACCAAGTCCATCAGACCT+TGG | + | chr4_4:80425116-80425135 | None:intergenic | 50.0% | |
| ! | CGGTGAGTTGGACAGAATCA+CGG | - | chr4_4:80425250-80425269 | Msa0707200:CDS | 50.0% |
| GAATGCTCATGCCACATCCA+CGG | - | chr4_4:80425465-80425484 | Msa0707200:five_prime_UTR | 50.0% | |
| !! | GGTCATTGTATTGGTGCTGC+TGG | - | chr4_4:80425678-80425697 | Msa0707200:five_prime_UTR | 50.0% |
| !! | CATTGTATTGGTGCTGCTGG+TGG | - | chr4_4:80425681-80425700 | Msa0707200:five_prime_UTR | 50.0% |
| !! | TATTGGTGCTGCTGGTGGTT+TGG | - | chr4_4:80425686-80425705 | Msa0707200:five_prime_UTR | 50.0% |
| ACATCCTCCTCCAAGTTCTG+TGG | + | chr4_4:80426051-80426070 | None:intergenic | 50.0% | |
| CTTGGGGACACTAGTTCGTA+TGG | - | chr4_4:80426335-80426354 | Msa0707200:five_prime_UTR | 50.0% | |
| ! | AGATGGTGGTTCATGGTGGC+CGG | + | chr4_4:80422686-80422705 | None:intergenic | 55.0% |
| TCCCCACTTGTATTGCAGCC+AGG | - | chr4_4:80423754-80423773 | Msa0707200:three_prime_UTR | 55.0% | |
| ! | AGCTTTCCTGCCCGTTTTGG+TGG | - | chr4_4:80423969-80423988 | Msa0707200:three_prime_UTR | 55.0% |
| ATCTGACCACCAAAACGGGC+AGG | + | chr4_4:80423978-80423997 | None:intergenic | 55.0% | |
| !! | TCGAAGGGCGTCAAGACCAT+GGG | - | chr4_4:80424687-80424706 | Msa0707200:intron | 55.0% |
| GTACACCAGAGCCTTCACCA+AGG | + | chr4_4:80424735-80424754 | None:intergenic | 55.0% | |
| ! | TGGTGAAGGCTCTGGTGTAC+TGG | - | chr4_4:80424735-80424754 | Msa0707200:intron | 55.0% |
| ATCCACGGTAGCTGGTGACT+TGG | - | chr4_4:80425480-80425499 | Msa0707200:five_prime_UTR | 55.0% | |
| GACGGTGGAGTAATGGTGGC+TGG | + | chr4_4:80422543-80422562 | None:intergenic | 60.0% | |
| GTCGGACGGTGGAGTAATGG+TGG | + | chr4_4:80422547-80422566 | None:intergenic | 60.0% | |
| GACGTCGGACGGTGGAGTAA+TGG | + | chr4_4:80422550-80422569 | None:intergenic | 60.0% | |
| TGTCATACGACGTCGGACGG+TGG | + | chr4_4:80422558-80422577 | None:intergenic | 60.0% | |
| GGAGGAGACGATTCCTGACG+CGG | + | chr4_4:80422821-80422840 | None:intergenic | 60.0% | |
| AGGAATCGTCTCCTCCGTGC+CGG | - | chr4_4:80422825-80422844 | Msa0707200:three_prime_UTR | 60.0% | |
| AATCACGTTTCCCGGCACGG+AGG | + | chr4_4:80422839-80422858 | None:intergenic | 60.0% | |
| CGCAATCACGTTTCCCGGCA+CGG | + | chr4_4:80422842-80422861 | None:intergenic | 60.0% | |
| GGACCCAGGCTTGAGGAAGT+AGG | + | chr4_4:80423275-80423294 | None:intergenic | 60.0% | |
| ! | CATGGTCTTGACGCCCTTCG+AGG | + | chr4_4:80424688-80424707 | None:intergenic | 60.0% |
| !! | CTCGAAGGGCGTCAAGACCA+TGG | - | chr4_4:80424686-80424705 | Msa0707200:intron | 60.0% |
| TGCTGGGGTTTCCCCTGAAG+AGG | - | chr4_4:80425166-80425185 | Msa0707200:CDS | 60.0% | |
| CATGCCACATCCACGGTAGC+TGG | - | chr4_4:80425472-80425491 | Msa0707200:five_prime_UTR | 60.0% | |
| GTCACCAGCTACCGTGGATG+TGG | + | chr4_4:80425479-80425498 | None:intergenic | 60.0% | |
| AGCCAAGTCACCAGCTACCG+TGG | + | chr4_4:80425485-80425504 | None:intergenic | 60.0% | |
| ! | GGTAGCTGGTGACTTGGCTG+AGG | - | chr4_4:80425486-80425505 | Msa0707200:five_prime_UTR | 60.0% |
| ! | GGTGGAGGTTAGTCCCGGCA+CGG | + | chr4_4:80422800-80422819 | None:intergenic | 65.0% |
| ! | GACGCGGTGGAGGTTAGTCC+CGG | + | chr4_4:80422805-80422824 | None:intergenic | 65.0% |
| GGACTAACCTCCACCGCGTC+AGG | - | chr4_4:80422805-80422824 | Msa0707200:three_prime_UTR | 65.0% | |
| GACGATTCCTGACGCGGTGG+AGG | + | chr4_4:80422815-80422834 | None:intergenic | 65.0% | |
| GGAGACGATTCCTGACGCGG+TGG | + | chr4_4:80422818-80422837 | None:intergenic | 65.0% | |
| GGAATCGTCTCCTCCGTGCC+GGG | - | chr4_4:80422826-80422845 | Msa0707200:three_prime_UTR | 65.0% | |
| TACACCGGCGACCACCGTGC+CGG | - | chr4_4:80422783-80422802 | Msa0707200:intron | 70.0% | |
| ! | GGAGGTTAGTCCCGGCACGG+TGG | + | chr4_4:80422797-80422816 | None:intergenic | 70.0% |
| ACACCGGCGACCACCGTGCC+GGG | - | chr4_4:80422784-80422803 | Msa0707200:intron | 75.0% | |
| AGTCCCGGCACGGTGGTCGC+CGG | + | chr4_4:80422790-80422809 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 80422449 | 80426471 | 80422449 | ID=Msa0707200;Name=Msa0707200 |
| chr4_4 | mRNA | 80422449 | 80426471 | 80422449 | ID=Msa0707200-mRNA-1;Parent=Msa0707200;Name=Msa0707200-mRNA-1;_AED=0.37;_eAED=0.37;_QI=1148|1|1|1|1|0.83|6|965|325 |
| chr4_4 | exon | 80422449 | 80422711 | 80422449 | ID=Msa0707200-mRNA-1:exon:26139;Parent=Msa0707200-mRNA-1 |
| chr4_4 | exon | 80422800 | 80422866 | 80422800 | ID=Msa0707200-mRNA-1:exon:26138;Parent=Msa0707200-mRNA-1 |
| chr4_4 | exon | 80423150 | 80423251 | 80423150 | ID=Msa0707200-mRNA-1:exon:26137;Parent=Msa0707200-mRNA-1 |
| chr4_4 | exon | 80423353 | 80423466 | 80423353 | ID=Msa0707200-mRNA-1:exon:26136;Parent=Msa0707200-mRNA-1 |
| chr4_4 | exon | 80423733 | 80424595 | 80423733 | ID=Msa0707200-mRNA-1:exon:26135;Parent=Msa0707200-mRNA-1 |
| chr4_4 | exon | 80424790 | 80426471 | 80424790 | ID=Msa0707200-mRNA-1:exon:26134;Parent=Msa0707200-mRNA-1 |
| chr4_4 | five_prime_UTR | 80425324 | 80426471 | 80425324 | ID=Msa0707200-mRNA-1:five_prime_utr;Parent=Msa0707200-mRNA-1 |
| chr4_4 | CDS | 80424790 | 80425323 | 80424790 | ID=Msa0707200-mRNA-1:cds;Parent=Msa0707200-mRNA-1 |
| chr4_4 | CDS | 80424152 | 80424595 | 80424152 | ID=Msa0707200-mRNA-1:cds;Parent=Msa0707200-mRNA-1 |
| chr4_4 | three_prime_UTR | 80423733 | 80424151 | 80423733 | ID=Msa0707200-mRNA-1:three_prime_utr;Parent=Msa0707200-mRNA-1 |
| chr4_4 | three_prime_UTR | 80423353 | 80423466 | 80423353 | ID=Msa0707200-mRNA-1:three_prime_utr;Parent=Msa0707200-mRNA-1 |
| chr4_4 | three_prime_UTR | 80423150 | 80423251 | 80423150 | ID=Msa0707200-mRNA-1:three_prime_utr;Parent=Msa0707200-mRNA-1 |
| chr4_4 | three_prime_UTR | 80422800 | 80422866 | 80422800 | ID=Msa0707200-mRNA-1:three_prime_utr;Parent=Msa0707200-mRNA-1 |
| chr4_4 | three_prime_UTR | 80422449 | 80422711 | 80422449 | ID=Msa0707200-mRNA-1:three_prime_utr;Parent=Msa0707200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
