AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0544390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544390 MtrunA17_Chr4g0025201 94.751 743 39 0 1 743 1 743 0.0 1461
Msa0544390 MtrunA17_Chr2g0322361 57.775 746 306 5 1 738 1 745 0.0 879
Msa0544390 MtrunA17_Chr2g0322371 57.739 743 305 5 1 740 1 737 0.0 868
Msa0544390 MtrunA17_Chr2g0322351 58.077 749 294 9 1 742 1 736 0.0 854
Msa0544390 MtrunA17_Chr2g0322341 67.052 346 109 4 1 342 3 347 6.73e-159 464
Msa0544390 MtrunA17_Chr2g0322331 53.906 384 162 5 370 742 1 380 9.56e-137 408
Msa0544390 MtrunA17_Chr4g0073711 33.721 774 440 16 1 711 228 991 3.30e-128 407
Msa0544390 MtrunA17_Chr3g0088821 33.076 777 424 16 18 711 268 1031 3.37e-126 402
Msa0544390 MtrunA17_Chr3g0102531 34.091 748 448 19 1 730 1 721 3.43e-125 390
Msa0544390 MtrunA17_Chr8g0364641 34.558 735 418 17 28 711 212 934 1.13e-124 396
Msa0544390 MtrunA17_Chr8g0379241 32.720 761 428 16 21 711 196 942 9.64e-124 394
Msa0544390 MtrunA17_Chr3g0102541 33.203 765 447 16 1 736 1 730 1.01e-123 387
Msa0544390 MtrunA17_Chr1g0201731 33.000 800 446 16 16 736 286 1074 1.62e-122 393
Msa0544390 MtrunA17_Chr2g0284211 32.503 763 428 17 21 710 181 929 8.25e-122 388
Msa0544390 MtrunA17_Chr7g0267731 32.088 776 433 16 16 711 178 939 4.80e-121 386
Msa0544390 MtrunA17_Chr8g0352231 32.152 762 421 15 33 711 283 1031 2.62e-120 387
Msa0544390 MtrunA17_Chr1g0183381 32.802 753 432 16 18 711 120 857 3.29e-120 382
Msa0544390 MtrunA17_Chr8g0383701 31.964 779 434 15 16 711 284 1049 5.07e-120 386
Msa0544390 MtrunA17_Chr3g0137951 31.870 797 448 14 21 736 281 1063 5.18e-120 386
Msa0544390 MtrunA17_Chr3g0102551 31.806 764 444 15 8 734 10 733 2.14e-117 370
Msa0544390 MtrunA17_Chr3g0078671 31.145 777 437 20 26 715 239 1004 3.83e-108 353
Msa0544390 MtrunA17_Chr4g0046401 30.606 709 449 17 22 710 21 706 1.81e-107 344
Msa0544390 MtrunA17_Chr2g0307191 30.447 693 442 17 31 715 29 689 9.70e-103 330
Msa0544390 MtrunA17_Chr5g0410641 29.251 841 449 21 21 734 268 1089 1.28e-101 337
Msa0544390 MtrunA17_Chr1g0186381 30.000 730 457 15 29 735 33 731 3.12e-101 328
Msa0544390 MtrunA17_Chr2g0298581 31.420 697 426 21 28 710 26 684 4.03e-100 323
Msa0544390 MtrunA17_Chr3g0077511 30.403 694 439 17 28 710 26 686 9.49e-100 322
Msa0544390 MtrunA17_Chr4g0039801 28.453 847 461 19 21 736 289 1121 7.74e-97 324
Msa0544390 MtrunA17_Chr7g0269741 28.692 826 442 19 21 711 313 1126 2.63e-96 323
Msa0544390 MtrunA17_Chr3g0095791 28.814 708 455 19 14 710 14 683 2.86e-95 310
Msa0544390 MtrunA17_Chr1g0165421 27.549 824 453 19 21 711 275 1087 1.65e-82 285
Msa0544390 MtrunA17_Chr7g0274751 31.333 600 291 15 21 528 112 682 1.02e-80 275
Msa0544390 MtrunA17_Chr2g0296991 39.474 380 213 6 18 380 219 598 9.40e-78 270
Msa0544390 MtrunA17_Chr2g0296991 30.383 339 212 7 380 710 674 996 8.64e-41 161
Msa0544390 MtrunA17_Chr1g0165411 27.349 830 468 20 21 734 261 1071 1.90e-76 267
Msa0544390 MtrunA17_Chr2g0297351 26.627 830 444 21 21 710 175 979 2.71e-73 257
Msa0544390 MtrunA17_Chr2g0307241 39.024 164 92 4 29 188 27 186 3.02e-30 118
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0544390 AT2G32540.1 45.085 763 382 10 1 737 1 752 0.0 637
Msa0544390 AT2G32530.1 43.455 764 393 11 1 737 1 752 0.0 637
Msa0544390 AT4G15320.3 42.839 768 396 14 1 737 1 756 0.0 612
Msa0544390 AT4G15320.5 42.876 765 394 14 1 734 1 753 0.0 611
Msa0544390 AT4G15320.4 42.018 783 396 15 1 737 1 771 0.0 604
Msa0544390 AT2G32620.1 43.179 755 394 12 8 737 10 754 0.0 598
Msa0544390 AT2G32610.1 42.277 764 406 13 1 737 1 756 0.0 581
Msa0544390 AT4G15290.1 42.520 762 399 13 1 734 1 751 0.0 575
Msa0544390 AT2G32620.4 43.114 668 345 12 95 737 1 658 4.44e-180 530
Msa0544390 AT2G32620.3 45.409 599 303 10 8 592 10 598 2.88e-176 518
Msa0544390 AT4G15320.2 40.652 706 331 14 1 644 1 680 6.51e-175 521
Msa0544390 AT4G15320.1 38.318 749 331 16 1 644 1 723 8.21e-166 499
Msa0544390 AT2G32620.2 47.961 515 245 9 8 508 10 515 1.08e-160 476
Msa0544390 AT5G09870.1 33.375 794 434 15 1 711 241 1022 9.20e-133 420
Msa0544390 AT5G64740.1 32.956 795 439 16 1 711 253 1037 2.19e-129 411
Msa0544390 AT5G05170.1 33.376 776 422 16 18 711 256 1018 1.69e-127 405
Msa0544390 AT5G17420.1 33.818 757 428 17 16 710 233 978 1.11e-125 400
Msa0544390 AT4G18780.1 33.029 766 423 16 21 710 184 935 1.65e-123 393
Msa0544390 AT2G21770.1 32.036 771 418 14 28 711 289 1040 4.89e-122 392
Msa0544390 AT1G55850.1 33.423 745 441 14 3 730 13 719 1.19e-120 379
Msa0544390 AT2G25540.1 31.830 798 447 16 21 736 255 1037 2.19e-120 387
Msa0544390 AT4G32410.1 32.046 777 424 15 21 711 275 1033 2.60e-119 384
Msa0544390 AT4G39350.1 31.784 796 433 19 4 711 263 1036 5.74e-113 367
Msa0544390 AT4G24010.1 33.186 678 383 18 51 702 59 692 8.28e-110 351
Msa0544390 AT1G32180.1 28.784 872 452 23 21 743 122 973 3.98e-107 350
Msa0544390 AT1G32180.2 28.784 872 452 23 21 743 122 973 3.98e-107 350
Msa0544390 AT4G24000.1 32.428 663 398 15 28 676 34 660 4.18e-107 343
Msa0544390 AT4G23990.1 32.227 633 379 12 63 677 90 690 4.11e-103 333
Msa0544390 AT1G02730.1 29.405 857 451 22 21 736 318 1161 2.10e-99 332
Msa0544390 AT2G33100.2 27.719 855 471 19 21 742 183 1023 9.16e-96 320
Msa0544390 AT2G33100.1 27.719 855 471 19 21 742 183 1023 9.16e-96 320
Msa0544390 AT3G03050.1 28.791 844 460 21 21 736 294 1124 2.49e-94 318
Msa0544390 AT4G38190.1 27.427 824 480 18 21 736 272 1085 2.13e-93 315
Msa0544390 AT5G16910.1 28.266 842 464 21 21 736 297 1124 2.44e-93 315
Msa0544390 AT5G44030.2 38.642 383 216 6 21 385 244 625 9.97e-78 271
Msa0544390 AT5G44030.2 31.792 346 208 7 376 710 702 1030 3.69e-43 169
Msa0544390 AT5G44030.1 39.164 383 214 7 21 385 215 596 1.06e-77 270
Msa0544390 AT5G44030.1 31.792 346 208 7 376 710 673 1001 5.83e-43 168
Msa0544390 AT4G24000.2 33.042 457 272 9 225 676 41 468 1.06e-71 243
Msa0544390 AT4G23990.2 30.539 501 304 11 195 677 2 476 2.83e-67 232
Msa0544390 AT5G44030.3 41.100 309 170 5 88 385 10 317 5.97e-67 236
Msa0544390 AT5G44030.3 31.487 343 213 6 376 710 394 722 1.32e-43 169

Find 165 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAAGCTTGGGATAGATTT+TGG 0.112878 4_1:-32790386 None:intergenic
CTATTTGAAACGGGTAAATT+TGG 0.159647 4_1:+32793884 Msa0544390:CDS
TTTCAGCCACAAAGTTTAAA+TGG 0.167617 4_1:+32793785 Msa0544390:CDS
CATGAATTTATAAGGTTATA+TGG 0.169345 4_1:+32791340 Msa0544390:intron
AAGGCATGCATAACAATATT+TGG 0.170240 4_1:-32791636 None:intergenic
CATAGAAGAAAAGTTATTTA+TGG 0.192304 4_1:+32791984 Msa0544390:CDS
AAAAGTACAAGGTACAAATT+AGG 0.194300 4_1:+32790094 Msa0544390:CDS
ACCATTCTTGTCTGAATTCT+TGG 0.215541 4_1:-32790164 None:intergenic
CTAAGTAGAAGGACAATTTC+TGG 0.216905 4_1:+32793962 Msa0544390:CDS
ATATACTCTATATGAATATT+TGG 0.217471 4_1:+32793484 Msa0544390:CDS
TGCACTTGTGGATTCTTGTT+TGG 0.222239 4_1:+32794141 Msa0544390:three_prime_UTR
GCTATCGAAGTTGCTTCTTA+TGG 0.273391 4_1:+32792260 Msa0544390:CDS
GCACTTGTGGATTCTTGTTT+GGG 0.290163 4_1:+32794142 Msa0544390:three_prime_UTR
TGAAGAGCATAGAAGATTAG+AGG 0.303612 4_1:-32790030 None:intergenic
TGTATTTGATCATATGTTAT+TGG 0.310371 4_1:+32793846 Msa0544390:CDS
GCAATATTTATCAAGTTGTT+TGG 0.318110 4_1:+32793761 Msa0544390:CDS
CACAAACAGTACCTTGATTA+TGG 0.319801 4_1:-32790459 None:intergenic
ATGACAGAAGATATACTAAC+TGG 0.326040 4_1:+32792506 Msa0544390:CDS
ACTGTTCTACTCAAATTGTT+AGG 0.328449 4_1:+32793593 Msa0544390:CDS
TAATTCCCATTTAAACTTTG+TGG 0.330588 4_1:-32793791 None:intergenic
ACACTCAAAGACGATCCTTT+TGG 0.332746 4_1:+32791729 Msa0544390:CDS
TTGAAATGATGTGGTTGCTT+TGG 0.334476 4_1:-32791426 None:intergenic
ACAGGTTGTGCTCCAATTGA+TGG 0.341818 4_1:+32792590 Msa0544390:CDS
AGAATTTACCAACACATTCA+TGG 0.350129 4_1:-32791457 None:intergenic
CGGCACTGGCTGGGGTAAAC+AGG 0.353921 4_1:+32792292 Msa0544390:CDS
CTTATATGTGGATCATGAAC+TGG 0.357355 4_1:+32792732 Msa0544390:CDS
TTGTCTGAATTCTTGGTCAT+TGG 0.361801 4_1:-32790157 None:intergenic
GAAATAATTTACAATTTGTA+AGG 0.370384 4_1:-32794051 None:intergenic
TGGATCATGAACTGGGGATT+TGG 0.370780 4_1:+32792740 Msa0544390:CDS
TTAGTCATGCTTTGGAAGAT+AGG 0.371081 4_1:+32792192 Msa0544390:CDS
AAACATGGTTCACCTTATCT+TGG 0.371514 4_1:+32788343 Msa0544390:CDS
TATTTGAAACGGGTAAATTT+GGG 0.371926 4_1:+32793885 Msa0544390:CDS
GCTTGTTACGTTTCTGATGA+TGG 0.375639 4_1:+32790000 Msa0544390:CDS
GAGTGTAGCATAGAATTGTT+GGG 0.378771 4_1:-32791712 None:intergenic
GAAATCAGTTAGTCATGCTT+TGG 0.381366 4_1:+32792184 Msa0544390:CDS
GTTATTCAGACAAAAGTCTC+TGG 0.388439 4_1:+32791555 Msa0544390:intron
TATATTCCTACTGCAATAGT+TGG 0.400122 4_1:+32793449 Msa0544390:CDS
CCTGTGAAGGCTATTGGTTC+TGG 0.400123 4_1:-32792572 None:intergenic
AAGTGCAGTGCTTGCAGTCT+TGG 0.402322 4_1:-32794125 None:intergenic
ATGAATTTATAAGGTTATAT+GGG 0.402985 4_1:+32791341 Msa0544390:intron
ATACAGGTGGGGCCATCAAT+TGG 0.406422 4_1:-32792602 None:intergenic
TACCTTTGGAGGAGACGGTC+AGG 0.411734 4_1:-32788414 None:intergenic
AAAGTACAAGGTACAAATTA+GGG 0.413047 4_1:+32790095 Msa0544390:CDS
GCACAACCTGTGAAGGCTAT+TGG 0.414383 4_1:-32792578 None:intergenic
TGAGTGTAGCATAGAATTGT+TGG 0.415415 4_1:-32791713 None:intergenic
GCATAGCATACTTGAGCAAC+TGG 0.416847 4_1:-32792764 None:intergenic
TTGTGGATTCTTGTTTGGGA+TGG 0.418454 4_1:+32794146 Msa0544390:three_prime_UTR
AACTCTCCTTCAAGTAAGCT+TGG 0.422451 4_1:-32790398 None:intergenic
TTCCTCCGTAGAACATTCCT+TGG 0.423092 4_1:-32791950 None:intergenic
TTCAGCCACAAAGTTTAAAT+GGG 0.427345 4_1:+32793786 Msa0544390:CDS
AACGATAAGATGGTAGTTCC+TGG 0.429194 4_1:-32793728 None:intergenic
GGTACAAACACAATTACAAA+AGG 0.432125 4_1:+32788217 Msa0544390:CDS
ACAGTGTTTATTGTGATGAT+TGG 0.432496 4_1:-32789937 None:intergenic
GCTTCTTATGGATATGAATA+CGG 0.432768 4_1:+32792272 Msa0544390:CDS
GATATGAATACGGCACTGGC+TGG 0.441391 4_1:+32792282 Msa0544390:CDS
TCTCTTATGTTGAGCCATAC+AGG 0.444479 4_1:-32792618 None:intergenic
GACTGCAAGCACTGCACTTG+TGG 0.447725 4_1:+32794129 Msa0544390:three_prime_UTR
GGGAATTCTTAGCTTATATG+TGG 0.447870 4_1:+32792720 Msa0544390:CDS
TCTATCCCAAGCTTACTTGA+AGG 0.451031 4_1:+32790392 Msa0544390:CDS
TGTGGATTCTTGTTTGGGAT+GGG 0.452073 4_1:+32794147 Msa0544390:three_prime_UTR
TTGAGAGGACTATTTGAAAC+GGG 0.456847 4_1:+32793875 Msa0544390:CDS
AATTGATGGCCCCACCTGTA+TGG 0.457674 4_1:+32792604 Msa0544390:CDS
CTCTCCGGATGACGTAGAAA+AGG 0.462366 4_1:+32792010 Msa0544390:CDS
TACCTTGGAGCAGGATTAGC+AGG 0.473026 4_1:+32791924 Msa0544390:CDS
AACAGTACCTTGATTATGGC+TGG 0.473416 4_1:-32790455 None:intergenic
AACAAAGAAATGGCTGAAGA+TGG 0.473942 4_1:+32791366 Msa0544390:CDS
TCATCACAAAAGTATCTAAA+CGG 0.475125 4_1:-32790120 None:intergenic
GGTAACCAAGCAACAACAAA+AGG 0.481449 4_1:-32788266 None:intergenic
AGAATAACATCTATGAATGC+TGG 0.482111 4_1:+32793554 Msa0544390:CDS
ATATGAATACGGCACTGGCT+GGG 0.484690 4_1:+32792283 Msa0544390:CDS
TATATGGGAGAACAAAGAAA+TGG 0.486548 4_1:+32791356 Msa0544390:CDS
TTTCAATGCTCACCTTTGGC+AGG 0.487234 4_1:-32792826 None:intergenic
CTATATGAATATTTGGCCTC+AGG 0.488511 4_1:+32793491 Msa0544390:CDS
ATTGCCATTTGATTTCCAAA+AGG 0.492263 4_1:-32791744 None:intergenic
TATGAATACGGCACTGGCTG+GGG 0.500144 4_1:+32792284 Msa0544390:CDS
AGAAAGATCTTCCTCCCTCT+AGG 0.503118 4_1:+32793645 Msa0544390:CDS
CAATAGTCAAATACCTTTGG+AGG 0.504802 4_1:-32788425 None:intergenic
ATATTCCTACTGCAATAGTT+GGG 0.507014 4_1:+32793450 Msa0544390:CDS
TGAACAACTACTCTATCCCT+TGG 0.507370 4_1:+32788301 Msa0544390:CDS
ACTCTCCTTCAAGTAAGCTT+GGG 0.509268 4_1:-32790397 None:intergenic
GTCACAAATATATCCACTGC+TGG 0.509996 4_1:-32789889 None:intergenic
TTCAAAATTTGCAAAACAGT+GGG 0.511246 4_1:+32790059 Msa0544390:CDS
GTGTTTATTGTGATGATTGG+TGG 0.517309 4_1:-32789934 None:intergenic
TTTGAGAGGACTATTTGAAA+CGG 0.519798 4_1:+32793874 Msa0544390:CDS
CTTGGACAAGTGCTACACTT+TGG 0.522574 4_1:-32794107 None:intergenic
TGGGAATTATGAGTGTGGTT+TGG 0.522651 4_1:+32793805 Msa0544390:CDS
ACAAGAATGGTTACAGATGA+AGG 0.525648 4_1:+32790176 Msa0544390:CDS
TTGCTTTGATTTGCGAAACA+TGG 0.529029 4_1:+32788328 Msa0544390:CDS
GATCAACATGATAAGAATGT+TGG 0.532049 4_1:+32793671 Msa0544390:CDS
ACAATCCACGTTCAACATGA+AGG 0.535399 4_1:-32791595 None:intergenic
TGATGTTAACAAAGCTGTTG+AGG 0.535514 4_1:+32792235 Msa0544390:CDS
TACCAACACATTCATGGCAC+CGG 0.536261 4_1:-32791451 None:intergenic
GACGGTGAAAATCCAAGATA+AGG 0.536524 4_1:-32788355 None:intergenic
ATCACCTTAGCTAAGATCAA+TGG 0.537668 4_1:+32788158 Msa0544390:exon
GAAAGATCTTCCTCCCTCTA+GGG 0.544091 4_1:+32793646 Msa0544390:CDS
GTTCAACATGAAGGGTGCAT+TGG 0.545978 4_1:-32791586 None:intergenic
TAAATCCCAACTATTGCAGT+AGG 0.548363 4_1:-32793455 None:intergenic
AAGCATGGTGGAACAATCAA+AGG 0.548964 4_1:+32793525 Msa0544390:CDS
AGTTATTTATGGTCTCTCTC+CGG 0.549554 4_1:+32791995 Msa0544390:CDS
GTATGGCTCAACATAAGAGA+TGG 0.552428 4_1:+32792621 Msa0544390:CDS
CAACATAAGAGATGGGCCAC+AGG 0.555868 4_1:+32792629 Msa0544390:CDS
TCTATGAATGCTGGATTCTG+TGG 0.557758 4_1:+32793563 Msa0544390:CDS
TATGGATATGAATACGGCAC+TGG 0.557824 4_1:+32792278 Msa0544390:CDS
TTATTCAGACAAAAGTCTCT+GGG 0.558475 4_1:+32791556 Msa0544390:intron
TCTCCGGATGACGTAGAAAA+GGG 0.558666 4_1:+32792011 Msa0544390:CDS
CAACTGTTATTTCCTGCCAA+AGG 0.558772 4_1:+32792814 Msa0544390:CDS
TTATGTTGAGCCATACAGGT+GGG 0.559671 4_1:-32792614 None:intergenic
ACCAAGAATTCAGACAAGAA+TGG 0.561970 4_1:+32790163 Msa0544390:CDS
TGTCAATTGCAACGATAAGA+TGG 0.562630 4_1:-32793738 None:intergenic
CAACCACATCATTTCAAAGC+CGG 0.562761 4_1:+32791432 Msa0544390:CDS
TTGGCCATTGATCTTAGCTA+AGG 0.567296 4_1:-32788162 None:intergenic
AAATCATCCAGCCATAATCA+AGG 0.569735 4_1:+32790448 Msa0544390:CDS
TAATGTAAACTACAGTACCT+TGG 0.570475 4_1:+32791909 Msa0544390:intron
TTATATGTGGATCATGAACT+GGG 0.572236 4_1:+32792733 Msa0544390:CDS
GTACAAACACAATTACAAAA+GGG 0.574146 4_1:+32788218 Msa0544390:CDS
CCAGAACCAATAGCCTTCAC+AGG 0.576406 4_1:+32792572 Msa0544390:CDS
AAACTACAGTACCTTGGAGC+AGG 0.577144 4_1:+32791915 Msa0544390:intron
GCAGGATTAGCAGGACTCCA+AGG 0.577239 4_1:+32791933 Msa0544390:CDS
ACCTTTGGAGGAGACGGTCA+GGG 0.577615 4_1:-32788413 None:intergenic
TCAAATACCTTTGGAGGAGA+CGG 0.578586 4_1:-32788419 None:intergenic
CTTCAAAATTTGCAAAACAG+TGG 0.578610 4_1:+32790058 Msa0544390:CDS
TCTACATATCCAGAGAAAAG+AGG 0.579233 4_1:+32791403 Msa0544390:CDS
TTAAATGGGAATTATGAGTG+TGG 0.581114 4_1:+32793800 Msa0544390:CDS
AATTGGAGCACAACCTGTGA+AGG 0.582766 4_1:-32792585 None:intergenic
GGACTCCAAGGAATGTTCTA+CGG 0.586185 4_1:+32791945 Msa0544390:CDS
TTGGAGGAGACGGTCAGGGT+TGG 0.591314 4_1:-32788409 None:intergenic
ACCCTGACCGTCTCCTCCAA+AGG 0.592049 4_1:+32788412 Msa0544390:CDS
CTTTGGCAGGAAATAACAGT+TGG 0.592197 4_1:-32792813 None:intergenic
TAACAAGCTAGCTTGTGAGA+TGG 0.592884 4_1:-32789985 None:intergenic
ATTTGTTCAATACAGGATTG+GGG 0.593445 4_1:+32793422 Msa0544390:intron
TATGGCTCAACATAAGAGAT+GGG 0.599447 4_1:+32792622 Msa0544390:CDS
CCTTTGCATATTGTAGACAA+AGG 0.599656 4_1:-32793911 None:intergenic
CAAATCAAAGCAATAAACCA+AGG 0.602058 4_1:-32788318 None:intergenic
TCTAAGCCGTAAAATAGATG+TGG 0.602585 4_1:+32790361 Msa0544390:CDS
TGGACTCCATTGAGTGGAGA+CGG 0.603007 4_1:-32788373 None:intergenic
CTGGATATGTAGATCAAATG+TGG 0.604731 4_1:-32791393 None:intergenic
TGGTAATGATGCAATATGCA+AGG 0.616220 4_1:-32792793 None:intergenic
CAATCCACGTTCAACATGAA+GGG 0.616695 4_1:-32791594 None:intergenic
TATGTTGAGCCATACAGGTG+GGG 0.616917 4_1:-32792613 None:intergenic
CCTTTGTCTACAATATGCAA+AGG 0.617973 4_1:+32793911 Msa0544390:CDS
AGTGTAGCATAGAATTGTTG+GGG 0.620173 4_1:-32791711 None:intergenic
GTCCTGCTAATCCTGCTCCA+AGG 0.623330 4_1:-32791926 None:intergenic
TGCACCCTTCATGTTGAACG+TGG 0.627495 4_1:+32791590 Msa0544390:CDS
CAGGACTGTCAATTAAAGCA+TGG 0.631923 4_1:+32793510 Msa0544390:CDS
TGTGCAAGAACTTCCAGCAG+TGG 0.635221 4_1:+32789876 Msa0544390:CDS
TCATGTTGATCATCCCTAGA+GGG 0.637021 4_1:-32793659 None:intergenic
GAGTGGAAGAGAGTTTGAGT+TGG 0.638045 4_1:-32788181 None:intergenic
AAATCAAAGCAATAAACCAA+GGG 0.642689 4_1:-32788317 None:intergenic
GCACCGGCTTTGAAATGATG+TGG 0.643336 4_1:-32791435 None:intergenic
AAAGGCTGGACTCCATTGAG+TGG 0.643881 4_1:-32788379 None:intergenic
AACCAAGCAACAACAAAAGG+AGG 0.647360 4_1:-32788263 None:intergenic
GGAGTCAAGCAAAATGCACA+AGG 0.647589 4_1:-32791655 None:intergenic
CTTATGTTGAGCCATACAGG+TGG 0.652213 4_1:-32792615 None:intergenic
TGCTTTAATTGACAGTCCTG+AGG 0.658217 4_1:-32793507 None:intergenic
TGACAGAAGATATACTAACT+GGG 0.667224 4_1:+32792507 Msa0544390:CDS
AGCCGGTGCCATGAATGTGT+TGG 0.669526 4_1:+32791449 Msa0544390:CDS
GACTGTCAATTAAAGCATGG+TGG 0.673791 4_1:+32793513 Msa0544390:CDS
GAAGATCTCAAGCATTCCTG+TGG 0.685486 4_1:-32792645 None:intergenic
TGTTGATCATCCCTAGAGGG+AGG 0.686634 4_1:-32793656 None:intergenic
AGTTGTTCACATACATAACA+CGG 0.687770 4_1:-32788287 None:intergenic
ATCATGTTGATCATCCCTAG+AGG 0.692053 4_1:-32793660 None:intergenic
TGCACGTGTATACGGTGGTG+AGG 0.709674 4_1:-32788120 None:intergenic
CTCCAAGGAATGTTCTACGG+AGG 0.709897 4_1:+32791948 Msa0544390:CDS
TTGTATGCACGTGTATACGG+TGG 0.729465 4_1:-32788125 None:intergenic
TATATGTGGATCATGAACTG+GGG 0.731139 4_1:+32792734 Msa0544390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAAATTTATTTTTTATTTTT+AGG - chr4_1:32789731-32789750 None:intergenic 0.0%
!!! TTTTTTGTTATAATAGTTAT+CGG - chr4_1:32788827-32788846 None:intergenic 10.0%
!!! GATAAAAAATAATTACTTTT+TGG - chr4_1:32789297-32789316 None:intergenic 10.0%
!!! TTTAAAAATCACAATTTTTT+GGG + chr4_1:32789406-32789425 Msa0544390:intron 10.0%
!!! GAAGTTTTATTTTTTTATAT+AGG + chr4_1:32790206-32790225 Msa0544390:intron 10.0%
!!! TTTATTTTTTTATATAGGAA+AGG + chr4_1:32790211-32790230 Msa0544390:intron 10.0%
!!! TTTTTTTTTTTAGGAAAAAT+TGG - chr4_1:32790690-32790709 None:intergenic 10.0%
!! TATATGTTACTAATTTAATT+AGG + chr4_1:32792042-32792061 Msa0544390:intron 10.0%
!! ATATGTTACTAATTTAATTA+GGG + chr4_1:32792043-32792062 Msa0544390:intron 10.0%
!! ACAAATTCAATAATAATAAA+AGG - chr4_1:32793262-32793281 None:intergenic 10.0%
!!! TTTTATTATTATTGAATTTG+TGG + chr4_1:32793261-32793280 Msa0544390:intron 10.0%
!! TGATAAATTAATTGTTATGA+AGG - chr4_1:32788477-32788496 None:intergenic 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG - chr4_1:32788554-32788573 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr4_1:32788657-32788676 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr4_1:32788681-32788700 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr4_1:32788680-32788699 Msa0544390:intron 15.0%
!!! TTTTTATGTTTATTGAAAAG+CGG + chr4_1:32788856-32788875 Msa0544390:intron 15.0%
!!! TAAACTAAAAGTTACTTTTT+AGG - chr4_1:32788930-32788949 None:intergenic 15.0%
!!! TTTTAGTTTATAATAGTGAT+CGG + chr4_1:32788940-32788959 Msa0544390:intron 15.0%
!!! TTTTCAAATATTTACTCAAA+TGG + chr4_1:32789027-32789046 Msa0544390:intron 15.0%
!!! TATTTTTAAATTCGAGTTTA+TGG + chr4_1:32789217-32789236 Msa0544390:intron 15.0%
!!! GTTTAAAAATCACAATTTTT+TGG + chr4_1:32789405-32789424 Msa0544390:intron 15.0%
!!! GTTTATTTTTTTTATTTGTG+TGG + chr4_1:32789602-32789621 Msa0544390:intron 15.0%
!!! TTTTAATAGTGATAGAAATA+TGG + chr4_1:32789819-32789838 Msa0544390:intron 15.0%
!!! GCTCTTTTTTTTTTTTTTTT+AGG - chr4_1:32790699-32790718 None:intergenic 15.0%
!!! AAAAGATATTTTAAAACGAA+GGG - chr4_1:32790755-32790774 None:intergenic 15.0%
!!! TAAAAGATATTTTAAAACGA+AGG - chr4_1:32790756-32790775 None:intergenic 15.0%
!! ATGAATTTATAAGGTTATAT+GGG + chr4_1:32791341-32791360 Msa0544390:intron 15.0%
!! TACAAATTGAAAATATGTTA+GGG - chr4_1:32791510-32791529 None:intergenic 15.0%
!! ATACAAATTGAAAATATGTT+AGG - chr4_1:32791511-32791530 None:intergenic 15.0%
!! AAAAAAAAAAAAACTATCAC+AGG + chr4_1:32792433-32792452 Msa0544390:intron 15.0%
!!! ATTGCATTTATTATTTTCAT+AGG - chr4_1:32793192-32793211 None:intergenic 15.0%
!! TATGAAAATAATAAATGCAA+TGG + chr4_1:32793191-32793210 Msa0544390:intron 15.0%
!! ATATACTCTATATGAATATT+TGG + chr4_1:32793484-32793503 Msa0544390:CDS 15.0%
!! GAAATAATTTACAATTTGTA+AGG - chr4_1:32794054-32794073 None:intergenic 15.0%
!! AGAAAAAGTTATTATTGCAT+TGG - chr4_1:32788594-32788613 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr4_1:32788671-32788690 Msa0544390:intron 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG - chr4_1:32788714-32788733 None:intergenic 20.0%
!!! TTTTATGTTTATTGAAAAGC+GGG + chr4_1:32788857-32788876 Msa0544390:intron 20.0%
!! ATAATATTGACCAAATACAT+CGG + chr4_1:32788892-32788911 Msa0544390:intron 20.0%
!!! AATTATGTTTCGTCTAAAAT+AGG - chr4_1:32789189-32789208 None:intergenic 20.0%
!!! ATTATTTTTTATCCCAAAAG+TGG + chr4_1:32789304-32789323 Msa0544390:intron 20.0%
!!! TTTGGTTCTTAATAGTTTTT+AGG - chr4_1:32789488-32789507 None:intergenic 20.0%
!! TATTAAGAACCAAACTATTA+TGG + chr4_1:32789494-32789513 Msa0544390:intron 20.0%
!! ATTCAAATTCCATAATAGTT+TGG - chr4_1:32789506-32789525 None:intergenic 20.0%
!!! GTATGTGTTTATTTTTTTGA+GGG + chr4_1:32789630-32789649 Msa0544390:intron 20.0%
!! GAATCAAATATTCATGAATT+CGG - chr4_1:32790650-32790669 None:intergenic 20.0%
!! ACATTGTATAATATATGCAA+AGG + chr4_1:32791039-32791058 Msa0544390:intron 20.0%
!!! TTCATGATGAATGTTTTTTT+TGG - chr4_1:32791137-32791156 None:intergenic 20.0%
!! CATGAATTTATAAGGTTATA+TGG + chr4_1:32791340-32791359 Msa0544390:intron 20.0%
!! CATAGAAGAAAAGTTATTTA+TGG + chr4_1:32791984-32792003 Msa0544390:CDS 20.0%
!! AAAAGAAAGTTTACCAAAAA+CGG - chr4_1:32792699-32792718 None:intergenic 20.0%
!!! TTTTTGGTAAACTTTCTTTT+AGG + chr4_1:32792699-32792718 Msa0544390:CDS 20.0%
!!! TTTTGGTAAACTTTCTTTTA+GGG + chr4_1:32792700-32792719 Msa0544390:CDS 20.0%
!!! TTTTGTAATTTGTTCAATAC+AGG + chr4_1:32793415-32793434 Msa0544390:intron 20.0%
!! TGTATTTGATCATATGTTAT+TGG + chr4_1:32793846-32793865 Msa0544390:CDS 20.0%
! TTCCACTCTATGAAAAATAT+TGG + chr4_1:32788196-32788215 Msa0544390:CDS 25.0%
!! TACCAATATTTTTCATAGAG+TGG - chr4_1:32788201-32788220 None:intergenic 25.0%
! GTACAAACACAATTACAAAA+GGG + chr4_1:32788218-32788237 Msa0544390:CDS 25.0%
! AAATCAAAGCAATAAACCAA+GGG - chr4_1:32788320-32788339 None:intergenic 25.0%
! AATCAATAGTCAAATACCTT+TGG - chr4_1:32788431-32788450 None:intergenic 25.0%
!!! AAATGACACTCATTTTGAAA+CGG - chr4_1:32788528-32788547 None:intergenic 25.0%
! TTGTTATAATAGTTATCGGA+GGG - chr4_1:32788823-32788842 None:intergenic 25.0%
!! TTTGTTATAATAGTTATCGG+AGG - chr4_1:32788824-32788843 None:intergenic 25.0%
! GGAAAAATATGAGAAATTGA+GGG - chr4_1:32789244-32789263 None:intergenic 25.0%
! AGGAAAAATATGAGAAATTG+AGG - chr4_1:32789245-32789264 None:intergenic 25.0%
!! TGATTTTTAAACCCTAAAGT+GGG - chr4_1:32789397-32789416 None:intergenic 25.0%
!!! CGTATGTGTTTATTTTTTTG+AGG + chr4_1:32789629-32789648 Msa0544390:intron 25.0%
! TTCAAAATTTGCAAAACAGT+GGG + chr4_1:32790059-32790078 Msa0544390:CDS 25.0%
!!! ACCATTTTGTAAAAAGTACA+AGG + chr4_1:32790083-32790102 Msa0544390:CDS 25.0%
!!! ACCTTGTACTTTTTACAAAA+TGG - chr4_1:32790087-32790106 None:intergenic 25.0%
!! AAAAGTACAAGGTACAAATT+AGG + chr4_1:32790094-32790113 Msa0544390:CDS 25.0%
! AAAGTACAAGGTACAAATTA+GGG + chr4_1:32790095-32790114 Msa0544390:CDS 25.0%
!!! TCATCACAAAAGTATCTAAA+CGG - chr4_1:32790123-32790142 None:intergenic 25.0%
! TATTGCATTATCATTATCAC+TGG - chr4_1:32790254-32790273 None:intergenic 25.0%
! TCAATATTGGTGAACAAAAT+TGG - chr4_1:32790726-32790745 None:intergenic 25.0%
! CTTACATGATGCTAATTAAA+TGG + chr4_1:32790887-32790906 Msa0544390:intron 25.0%
!! GTTATTTACACTTTTCAATG+TGG - chr4_1:32790937-32790956 None:intergenic 25.0%
!!! CATTTTAAGGAGAATAAGTT+GGG - chr4_1:32791086-32791105 None:intergenic 25.0%
!! TTTCTTTTGACAGGTAATTA+AGG - chr4_1:32791290-32791309 None:intergenic 25.0%
!! TGAAAATATGTTAGGGTTTT+TGG - chr4_1:32791503-32791522 None:intergenic 25.0%
!! TCAAATGGCAATTTTGTATA+AGG + chr4_1:32791755-32791774 Msa0544390:CDS 25.0%
!!! ATCATAACATGACTCTTTTT+TGG + chr4_1:32792073-32792092 Msa0544390:intron 25.0%
! GTCGAGTTAAAACAAAAATT+TGG + chr4_1:32792143-32792162 Msa0544390:CDS 25.0%
! AACAAAACAAAACAAAACAC+AGG - chr4_1:32792352-32792371 None:intergenic 25.0%
!! ATGTAGCGGTTAATAAATTT+TGG + chr4_1:32792400-32792419 Msa0544390:intron 25.0%
!! ATTGATCTTGTTGGAATTTT+AGG + chr4_1:32792463-32792482 Msa0544390:intron 25.0%
!!! AATAATATTGCTTTTAGCGA+AGG - chr4_1:32792872-32792891 None:intergenic 25.0%
! ACTATGTTTGATTCTTCAAT+AGG - chr4_1:32793129-32793148 None:intergenic 25.0%
! ATTGAATTTGTGGAAAATGT+AGG + chr4_1:32793271-32793290 Msa0544390:intron 25.0%
! TTGAATTTGTGGAAAATGTA+GGG + chr4_1:32793272-32793291 Msa0544390:intron 25.0%
!!! TAATTTGTTCAATACAGGAT+TGG + chr4_1:32793420-32793439 Msa0544390:intron 25.0%
!! AATTTGTTCAATACAGGATT+GGG + chr4_1:32793421-32793440 Msa0544390:intron 25.0%
!! GCAATATTTATCAAGTTGTT+TGG + chr4_1:32793761-32793780 Msa0544390:CDS 25.0%
! TAATTCCCATTTAAACTTTG+TGG - chr4_1:32793794-32793813 None:intergenic 25.0%
!! TATTTGAAACGGGTAAATTT+GGG + chr4_1:32793885-32793904 Msa0544390:CDS 25.0%
!! TTTTTGTATGTCTAAGTAGA+AGG + chr4_1:32793951-32793970 Msa0544390:CDS 25.0%
! TTTTTGTATGCACGTGTATA+CGG - chr4_1:32788131-32788150 None:intergenic 30.0%
GGTACAAACACAATTACAAA+AGG + chr4_1:32788217-32788236 Msa0544390:CDS 30.0%
AGTTGTTCACATACATAACA+CGG - chr4_1:32788290-32788309 None:intergenic 30.0%
CAAATCAAAGCAATAAACCA+AGG - chr4_1:32788321-32788340 None:intergenic 30.0%
GGAGGGAGTAAATATTAATT+AGG - chr4_1:32788507-32788526 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG - chr4_1:32788762-32788781 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG + chr4_1:32788763-32788782 Msa0544390:intron 30.0%
TACAATGCATAACATATGCA+AGG + chr4_1:32789088-32789107 Msa0544390:intron 30.0%
! TATGTTTCGTCTAAAATAGG+AGG - chr4_1:32789186-32789205 None:intergenic 30.0%
CCAAATAGGGAACAAAATAT+AGG - chr4_1:32789265-32789284 None:intergenic 30.0%
! CCTATATTTTGTTCCCTATT+TGG + chr4_1:32789262-32789281 Msa0544390:intron 30.0%
!! AGAGCAAAAATACCACTTTT+GGG - chr4_1:32789319-32789338 None:intergenic 30.0%
! TAGAGCAAAAATACCACTTT+TGG - chr4_1:32789320-32789339 None:intergenic 30.0%
! GTGATTTTTAAACCCTAAAG+TGG - chr4_1:32789398-32789417 None:intergenic 30.0%
!!! AATTTTTTGGGTCAAAACAC+AGG + chr4_1:32789418-32789437 Msa0544390:intron 30.0%
TTGCAAGAAATTGAAGTCAT+TGG + chr4_1:32789538-32789557 Msa0544390:intron 30.0%
TGCAAGAAATTGAAGTCATT+GGG + chr4_1:32789539-32789558 Msa0544390:intron 30.0%
ACAAACATAATTGATGAGTG+TGG + chr4_1:32789568-32789587 Msa0544390:intron 30.0%
ACAGTGTTTATTGTGATGAT+TGG - chr4_1:32789940-32789959 None:intergenic 30.0%
CTTCAAAATTTGCAAAACAG+TGG + chr4_1:32790058-32790077 Msa0544390:CDS 30.0%
TCTGACTACAAAATGTCAAA+TGG + chr4_1:32790301-32790320 Msa0544390:intron 30.0%
!! TTTTGTTTCTCTATGTTGAC+AGG + chr4_1:32790325-32790344 Msa0544390:intron 30.0%
! CAGTTTTCTCAAATACTAAC+AGG + chr4_1:32790423-32790442 Msa0544390:CDS 30.0%
!! TAATTTTGATCGAACGACTA+CGG - chr4_1:32790528-32790547 None:intergenic 30.0%
!! CCATTTTAAGGAGAATAAGT+TGG - chr4_1:32791087-32791106 None:intergenic 30.0%
CCAACTTATTCTCCTTAAAA+TGG + chr4_1:32791084-32791103 Msa0544390:intron 30.0%
! GCTCAAAATTCTCCATTTTA+AGG - chr4_1:32791099-32791118 None:intergenic 30.0%
GATTACTTGCAAAAATAACC+TGG + chr4_1:32791206-32791225 Msa0544390:intron 30.0%
! TAGACATGTTTTCTTTTGAC+AGG - chr4_1:32791299-32791318 None:intergenic 30.0%
GCTCACTTCATGAATTTATA+AGG + chr4_1:32791332-32791351 Msa0544390:intron 30.0%
TATATGGGAGAACAAAGAAA+TGG + chr4_1:32791356-32791375 Msa0544390:CDS 30.0%
AGAATTTACCAACACATTCA+TGG - chr4_1:32791460-32791479 None:intergenic 30.0%
TTATTCAGACAAAAGTCTCT+GGG + chr4_1:32791556-32791575 Msa0544390:intron 30.0%
AAGGCATGCATAACAATATT+TGG - chr4_1:32791639-32791658 None:intergenic 30.0%
! ATTGCCATTTGATTTCCAAA+AGG - chr4_1:32791747-32791766 None:intergenic 30.0%
TAATGTAAACTACAGTACCT+TGG + chr4_1:32791909-32791928 Msa0544390:intron 30.0%
AACATTCGTTTGAGAGTTTA+GGG - chr4_1:32792102-32792121 None:intergenic 30.0%
! ACAAAAATTTGGAGCTTCAA+AGG + chr4_1:32792154-32792173 Msa0544390:CDS 30.0%
GCTTCTTATGGATATGAATA+CGG + chr4_1:32792272-32792291 Msa0544390:CDS 30.0%
!!! TTTTGTTTTGTTTGCTTGCT+CGG + chr4_1:32792365-32792384 Msa0544390:intron 30.0%
GGAAATTGAATTGATCTTGT+TGG + chr4_1:32792454-32792473 Msa0544390:intron 30.0%
!! ATCTTGTTGGAATTTTAGGT+GGG + chr4_1:32792467-32792486 Msa0544390:intron 30.0%
ATGACAGAAGATATACTAAC+TGG + chr4_1:32792506-32792525 Msa0544390:CDS 30.0%
TGACAGAAGATATACTAACT+GGG + chr4_1:32792507-32792526 Msa0544390:CDS 30.0%
TTATATGTGGATCATGAACT+GGG + chr4_1:32792733-32792752 Msa0544390:CDS 30.0%
! ACACTTTTAATATGAGGTGT+CGG - chr4_1:32792929-32792948 None:intergenic 30.0%
! TCGAACACACTTTTAATATG+AGG - chr4_1:32792935-32792954 None:intergenic 30.0%
CACATGTTTAAATGTGATGT+TGG - chr4_1:32792969-32792988 None:intergenic 30.0%
TAGTGTTCATGTATGTATGT+CGG + chr4_1:32793060-32793079 Msa0544390:intron 30.0%
!! AATGGACTATGTGTAACTTT+AGG + chr4_1:32793209-32793228 Msa0544390:intron 30.0%
ATTTGTTCAATACAGGATTG+GGG + chr4_1:32793422-32793441 Msa0544390:intron 30.0%
TATATTCCTACTGCAATAGT+TGG + chr4_1:32793449-32793468 Msa0544390:CDS 30.0%
ATATTCCTACTGCAATAGTT+GGG + chr4_1:32793450-32793469 Msa0544390:CDS 30.0%
AGAATAACATCTATGAATGC+TGG + chr4_1:32793554-32793573 Msa0544390:CDS 30.0%
ACTGTTCTACTCAAATTGTT+AGG + chr4_1:32793593-32793612 Msa0544390:CDS 30.0%
GATCAACATGATAAGAATGT+TGG + chr4_1:32793671-32793690 Msa0544390:CDS 30.0%
TTTCAGCCACAAAGTTTAAA+TGG + chr4_1:32793785-32793804 Msa0544390:CDS 30.0%
TTCAGCCACAAAGTTTAAAT+GGG + chr4_1:32793786-32793805 Msa0544390:CDS 30.0%
TTAAATGGGAATTATGAGTG+TGG + chr4_1:32793800-32793819 Msa0544390:CDS 30.0%
TCAAATAGTCCTCTCAAAAA+TGG - chr4_1:32793872-32793891 None:intergenic 30.0%
TTTGAGAGGACTATTTGAAA+CGG + chr4_1:32793874-32793893 Msa0544390:CDS 30.0%
! CTATTTGAAACGGGTAAATT+TGG + chr4_1:32793884-32793903 Msa0544390:CDS 30.0%
ATCACCTTAGCTAAGATCAA+TGG + chr4_1:32788158-32788177 Msa0544390:exon 35.0%
!! TTGCTTTGATTTGCGAAACA+TGG + chr4_1:32788328-32788347 Msa0544390:CDS 35.0%
AAACATGGTTCACCTTATCT+TGG + chr4_1:32788343-32788362 Msa0544390:CDS 35.0%
CAATAGTCAAATACCTTTGG+AGG - chr4_1:32788428-32788447 None:intergenic 35.0%
! TGTGCAGAGTATTAATTGGA+GGG - chr4_1:32788628-32788647 None:intergenic 35.0%
! GTAGTGTGCAGAGTATTAAT+TGG - chr4_1:32788632-32788651 None:intergenic 35.0%
CGTTGAATAACCGATGTATT+TGG - chr4_1:32788905-32788924 None:intergenic 35.0%
TGCATAACATATGCAAGGTT+CGG + chr4_1:32789093-32789112 Msa0544390:intron 35.0%
AACACTTAAAGCCTGTGTTT+GGG - chr4_1:32789128-32789147 None:intergenic 35.0%
TAACACTTAAAGCCTGTGTT+TGG - chr4_1:32789129-32789148 None:intergenic 35.0%
TTGGGTGAAAAGACCAAATA+GGG - chr4_1:32789278-32789297 None:intergenic 35.0%
TTTGGGTGAAAAGACCAAAT+AGG - chr4_1:32789279-32789298 None:intergenic 35.0%
ACACACAGAATTATAACCGT+TGG + chr4_1:32789360-32789379 Msa0544390:intron 35.0%
CACACAGAATTATAACCGTT+GGG + chr4_1:32789361-32789380 Msa0544390:intron 35.0%
GACCAAAAATTCCCACTTTA+GGG + chr4_1:32789383-32789402 Msa0544390:intron 35.0%
! AACCCTAAAGTGGGAATTTT+TGG - chr4_1:32789388-32789407 None:intergenic 35.0%
GTGTTTATTGTGATGATTGG+TGG - chr4_1:32789937-32789956 None:intergenic 35.0%
! TGAAGAGCATAGAAGATTAG+AGG - chr4_1:32790033-32790052 None:intergenic 35.0%
TTGTCTGAATTCTTGGTCAT+TGG - chr4_1:32790160-32790179 None:intergenic 35.0%
ACCAAGAATTCAGACAAGAA+TGG + chr4_1:32790163-32790182 Msa0544390:CDS 35.0%
ACCATTCTTGTCTGAATTCT+TGG - chr4_1:32790167-32790186 None:intergenic 35.0%
ACAAGAATGGTTACAGATGA+AGG + chr4_1:32790176-32790195 Msa0544390:CDS 35.0%
TCTAAGCCGTAAAATAGATG+TGG + chr4_1:32790361-32790380 Msa0544390:CDS 35.0%
! TTGGGTCCACATCTATTTTA+CGG - chr4_1:32790370-32790389 None:intergenic 35.0%
! GTAAGCTTGGGATAGATTTT+GGG - chr4_1:32790388-32790407 None:intergenic 35.0%
! AGTAAGCTTGGGATAGATTT+TGG - chr4_1:32790389-32790408 None:intergenic 35.0%
AAATCATCCAGCCATAATCA+AGG + chr4_1:32790448-32790467 Msa0544390:CDS 35.0%
CACAAACAGTACCTTGATTA+TGG - chr4_1:32790462-32790481 None:intergenic 35.0%
!! CATAATCAAGGTACTGTTTG+TGG + chr4_1:32790460-32790479 Msa0544390:intron 35.0%
TATTCATGAATTCGGAACGT+TGG - chr4_1:32790642-32790661 None:intergenic 35.0%
! CGAAGGGTTTGTTTCAATAT+TGG - chr4_1:32790739-32790758 None:intergenic 35.0%
TGTCAATTGAGCTAAACTCA+CGG - chr4_1:32791016-32791035 None:intergenic 35.0%
! TGAGTTTAGCTCAATTGACA+AGG + chr4_1:32791016-32791035 Msa0544390:intron 35.0%
TACTTGCAAAAACTTTGCAC+AGG + chr4_1:32791232-32791251 Msa0544390:intron 35.0%
AACAAAGAAATGGCTGAAGA+TGG + chr4_1:32791366-32791385 Msa0544390:CDS 35.0%
CTGGATATGTAGATCAAATG+TGG - chr4_1:32791396-32791415 None:intergenic 35.0%
TCTACATATCCAGAGAAAAG+AGG + chr4_1:32791403-32791422 Msa0544390:CDS 35.0%
TTGAAATGATGTGGTTGCTT+TGG - chr4_1:32791429-32791448 None:intergenic 35.0%
GTTATTCAGACAAAAGTCTC+TGG + chr4_1:32791555-32791574 Msa0544390:intron 35.0%
AGTGTAGCATAGAATTGTTG+GGG - chr4_1:32791714-32791733 None:intergenic 35.0%
GAGTGTAGCATAGAATTGTT+GGG - chr4_1:32791715-32791734 None:intergenic 35.0%
TGAGTGTAGCATAGAATTGT+TGG - chr4_1:32791716-32791735 None:intergenic 35.0%
!! CGATCCTTTTGGAAATCAAA+TGG + chr4_1:32791740-32791759 Msa0544390:CDS 35.0%
AGTTATTTATGGTCTCTCTC+CGG + chr4_1:32791995-32792014 Msa0544390:CDS 35.0%
CAACATTCGTTTGAGAGTTT+AGG - chr4_1:32792103-32792122 None:intergenic 35.0%
GAAATCAGTTAGTCATGCTT+TGG + chr4_1:32792184-32792203 Msa0544390:CDS 35.0%
!! TTAGTCATGCTTTGGAAGAT+AGG + chr4_1:32792192-32792211 Msa0544390:CDS 35.0%
TGATGTTAACAAAGCTGTTG+AGG + chr4_1:32792235-32792254 Msa0544390:CDS 35.0%
! GATCTTGTTGGAATTTTAGG+TGG + chr4_1:32792466-32792485 Msa0544390:intron 35.0%
TGACGATACACAAAAAAGGT+TGG + chr4_1:32792531-32792550 Msa0544390:CDS 35.0%
TATGGCTCAACATAAGAGAT+GGG + chr4_1:32792622-32792641 Msa0544390:CDS 35.0%
AGAAAGTTTACCAAAAACGG+CGG - chr4_1:32792696-32792715 None:intergenic 35.0%
GGGAATTCTTAGCTTATATG+TGG + chr4_1:32792720-32792739 Msa0544390:CDS 35.0%
CTTATATGTGGATCATGAAC+TGG + chr4_1:32792732-32792751 Msa0544390:CDS 35.0%
TATATGTGGATCATGAACTG+GGG + chr4_1:32792734-32792753 Msa0544390:CDS 35.0%
! TGGTAATGATGCAATATGCA+AGG - chr4_1:32792796-32792815 None:intergenic 35.0%
!! TGTTTTTCAATGCTCACCTT+TGG - chr4_1:32792833-32792852 None:intergenic 35.0%
! TGCTTTTAGCGAAGGAAAAA+TGG - chr4_1:32792864-32792883 None:intergenic 35.0%
GTAAAATTGATCTGCAGAGT+TGG - chr4_1:32793359-32793378 None:intergenic 35.0%
TAAATCCCAACTATTGCAGT+AGG - chr4_1:32793458-32793477 None:intergenic 35.0%
CTATATGAATATTTGGCCTC+AGG + chr4_1:32793491-32793510 Msa0544390:CDS 35.0%
TGTCAATTGCAACGATAAGA+TGG - chr4_1:32793741-32793760 None:intergenic 35.0%
!!! TGTTATTGGCCATTTTTGAG+AGG + chr4_1:32793860-32793879 Msa0544390:CDS 35.0%
! TTGAGAGGACTATTTGAAAC+GGG + chr4_1:32793875-32793894 Msa0544390:CDS 35.0%
CCTTTGCATATTGTAGACAA+AGG - chr4_1:32793914-32793933 None:intergenic 35.0%
CCTTTGTCTACAATATGCAA+AGG + chr4_1:32793911-32793930 Msa0544390:CDS 35.0%
CTAAGTAGAAGGACAATTTC+TGG + chr4_1:32793962-32793981 Msa0544390:CDS 35.0%
TTGGCCATTGATCTTAGCTA+AGG - chr4_1:32788165-32788184 None:intergenic 40.0%
!!! ATCCTCCTTTTGTTGTTGCT+TGG + chr4_1:32788261-32788280 Msa0544390:CDS 40.0%
AACCAAGCAACAACAAAAGG+AGG - chr4_1:32788266-32788285 None:intergenic 40.0%
GGTAACCAAGCAACAACAAA+AGG - chr4_1:32788269-32788288 None:intergenic 40.0%
TGAACAACTACTCTATCCCT+TGG + chr4_1:32788301-32788320 Msa0544390:CDS 40.0%
GACGGTGAAAATCCAAGATA+AGG - chr4_1:32788358-32788377 None:intergenic 40.0%
!!! GTCAGGGTTGGTTTTGATAA+AGG - chr4_1:32788400-32788419 None:intergenic 40.0%
! TCAAATACCTTTGGAGGAGA+CGG - chr4_1:32788422-32788441 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr4_1:32788767-32788786 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr4_1:32788525-32788544 None:intergenic 40.0%
! GTGTGCAGAGTATTAATTGG+AGG - chr4_1:32788629-32788648 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr4_1:32788767-32788786 Msa0544390:intron 40.0%
GCATAACATATGCAAGGTTC+GGG + chr4_1:32789094-32789113 Msa0544390:intron 40.0%
ACACTTAAAGCCTGTGTTTG+GGG - chr4_1:32789127-32789146 None:intergenic 40.0%
GGACCAAAAATTCCCACTTT+AGG + chr4_1:32789382-32789401 Msa0544390:intron 40.0%
TTTGGGTCAAAACACAGGTT+AGG + chr4_1:32789423-32789442 Msa0544390:intron 40.0%
GTCACAAATATATCCACTGC+TGG - chr4_1:32789892-32789911 None:intergenic 40.0%
! TAACAAGCTAGCTTGTGAGA+TGG - chr4_1:32789988-32790007 None:intergenic 40.0%
! GCTTGTTACGTTTCTGATGA+TGG + chr4_1:32790000-32790019 Msa0544390:CDS 40.0%
TCTATCCCAAGCTTACTTGA+AGG + chr4_1:32790392-32790411 Msa0544390:CDS 40.0%
ACTCTCCTTCAAGTAAGCTT+GGG - chr4_1:32790400-32790419 None:intergenic 40.0%
AACTCTCCTTCAAGTAAGCT+TGG - chr4_1:32790401-32790420 None:intergenic 40.0%
AACAGTACCTTGATTATGGC+TGG - chr4_1:32790458-32790477 None:intergenic 40.0%
! ATGGAGAATTTTGAGCAGCT+TGG + chr4_1:32791103-32791122 Msa0544390:intron 40.0%
CAACCACATCATTTCAAAGC+CGG + chr4_1:32791432-32791451 Msa0544390:CDS 40.0%
CAATCCACGTTCAACATGAA+GGG - chr4_1:32791597-32791616 None:intergenic 40.0%
ACAATCCACGTTCAACATGA+AGG - chr4_1:32791598-32791617 None:intergenic 40.0%
! TGCATTTTGCTTGACTCCAA+GGG + chr4_1:32791660-32791679 Msa0544390:CDS 40.0%
! ACACTCAAAGACGATCCTTT+TGG + chr4_1:32791729-32791748 Msa0544390:CDS 40.0%
AACTCTCAAACGAATGTTGC+AGG + chr4_1:32792104-32792123 Msa0544390:intron 40.0%
GCTATCGAAGTTGCTTCTTA+TGG + chr4_1:32792260-32792279 Msa0544390:CDS 40.0%
TATGGATATGAATACGGCAC+TGG + chr4_1:32792278-32792297 Msa0544390:CDS 40.0%
!! TGTTGGAATTTTAGGTGGGT+TGG + chr4_1:32792471-32792490 Msa0544390:intron 40.0%
!!! TTTTAGGTGGGTTGGATGTA+TGG + chr4_1:32792479-32792498 Msa0544390:intron 40.0%
TTATGTTGAGCCATACAGGT+GGG - chr4_1:32792617-32792636 None:intergenic 40.0%
TCTCTTATGTTGAGCCATAC+AGG - chr4_1:32792621-32792640 None:intergenic 40.0%
GTATGGCTCAACATAAGAGA+TGG + chr4_1:32792621-32792640 Msa0544390:CDS 40.0%
CTTTGGCAGGAAATAACAGT+TGG - chr4_1:32792816-32792835 None:intergenic 40.0%
!! CAACTGTTATTTCCTGCCAA+AGG + chr4_1:32792814-32792833 Msa0544390:CDS 40.0%
TGCTTTAATTGACAGTCCTG+AGG - chr4_1:32793510-32793529 None:intergenic 40.0%
CAGGACTGTCAATTAAAGCA+TGG + chr4_1:32793510-32793529 Msa0544390:CDS 40.0%
GACTGTCAATTAAAGCATGG+TGG + chr4_1:32793513-32793532 Msa0544390:CDS 40.0%
! AAGCATGGTGGAACAATCAA+AGG + chr4_1:32793525-32793544 Msa0544390:CDS 40.0%
TCTATGAATGCTGGATTCTG+TGG + chr4_1:32793563-32793582 Msa0544390:CDS 40.0%
TCATGTTGATCATCCCTAGA+GGG - chr4_1:32793662-32793681 None:intergenic 40.0%
ATCATGTTGATCATCCCTAG+AGG - chr4_1:32793663-32793682 None:intergenic 40.0%
AACGATAAGATGGTAGTTCC+TGG - chr4_1:32793731-32793750 None:intergenic 40.0%
TGGGAATTATGAGTGTGGTT+TGG + chr4_1:32793805-32793824 Msa0544390:CDS 40.0%
TGCACTTGTGGATTCTTGTT+TGG + chr4_1:32794141-32794160 Msa0544390:three_prime_UTR 40.0%
! GCACTTGTGGATTCTTGTTT+GGG + chr4_1:32794142-32794161 Msa0544390:three_prime_UTR 40.0%
! TTGTGGATTCTTGTTTGGGA+TGG + chr4_1:32794146-32794165 Msa0544390:three_prime_UTR 40.0%
! TGTGGATTCTTGTTTGGGAT+GGG + chr4_1:32794147-32794166 Msa0544390:three_prime_UTR 40.0%
TTGTATGCACGTGTATACGG+TGG - chr4_1:32788128-32788147 None:intergenic 45.0%
GAGTGGAAGAGAGTTTGAGT+TGG - chr4_1:32788184-32788203 None:intergenic 45.0%
! TTTTCACCGTCTCCACTCAA+TGG + chr4_1:32788367-32788386 Msa0544390:CDS 45.0%
!!! GGGTTGGTTTTGATAAAGGC+TGG - chr4_1:32788396-32788415 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr4_1:32788766-32788785 Msa0544390:intron 45.0%
!!! GTGGGAATTTTTGGTCCCAA+CGG - chr4_1:32789379-32789398 None:intergenic 45.0%
!! TCAAGGTACTGTTTGTGGTC+CGG + chr4_1:32790465-32790484 Msa0544390:intron 45.0%
TTCAAATGCGCGAATGTGTG+TGG - chr4_1:32790501-32790520 None:intergenic 45.0%
AAAGGTTGTGATTCGACCCT+CGG + chr4_1:32791057-32791076 Msa0544390:intron 45.0%
! AGAATAAGTTGGGTGTCCGA+GGG - chr4_1:32791076-32791095 None:intergenic 45.0%
! AAGTTTTTGCAAGTAGCGCC+AGG - chr4_1:32791227-32791246 None:intergenic 45.0%
! TTGCTTTGGCCTCTTTTCTC+TGG - chr4_1:32791415-32791434 None:intergenic 45.0%
TACCAACACATTCATGGCAC+CGG - chr4_1:32791454-32791473 None:intergenic 45.0%
! GTTCAACATGAAGGGTGCAT+TGG - chr4_1:32791589-32791608 None:intergenic 45.0%
GGAGTCAAGCAAAATGCACA+AGG - chr4_1:32791658-32791677 None:intergenic 45.0%
! GTGCATTTTGCTTGACTCCA+AGG + chr4_1:32791659-32791678 Msa0544390:CDS 45.0%
! GCATTTTGCTTGACTCCAAG+GGG + chr4_1:32791661-32791680 Msa0544390:CDS 45.0%
! AGCTACTTCTTTTTGCCCCT+TGG - chr4_1:32791679-32791698 None:intergenic 45.0%
AAACTACAGTACCTTGGAGC+AGG + chr4_1:32791915-32791934 Msa0544390:intron 45.0%
GGACTCCAAGGAATGTTCTA+CGG + chr4_1:32791945-32791964 Msa0544390:CDS 45.0%
TTCCTCCGTAGAACATTCCT+TGG - chr4_1:32791953-32791972 None:intergenic 45.0%
TCTCCGGATGACGTAGAAAA+GGG + chr4_1:32792011-32792030 Msa0544390:CDS 45.0%
! GTACCCTTTTCTACGTCATC+CGG - chr4_1:32792017-32792036 None:intergenic 45.0%
!! ATATGAATACGGCACTGGCT+GGG + chr4_1:32792283-32792302 Msa0544390:CDS 45.0%
GGGCTGACGATACACAAAAA+AGG + chr4_1:32792527-32792546 Msa0544390:CDS 45.0%
AATTGGAGCACAACCTGTGA+AGG - chr4_1:32792588-32792607 None:intergenic 45.0%
ACAGGTTGTGCTCCAATTGA+TGG + chr4_1:32792590-32792609 Msa0544390:CDS 45.0%
TATGTTGAGCCATACAGGTG+GGG - chr4_1:32792616-32792635 None:intergenic 45.0%
CTTATGTTGAGCCATACAGG+TGG - chr4_1:32792618-32792637 None:intergenic 45.0%
GAAGATCTCAAGCATTCCTG+TGG - chr4_1:32792648-32792667 None:intergenic 45.0%
CCAAAAACGGCGGCAAAAAT+AGG - chr4_1:32792686-32792705 None:intergenic 45.0%
!!! CCTATTTTTGCCGCCGTTTT+TGG + chr4_1:32792683-32792702 Msa0544390:CDS 45.0%
TGGATCATGAACTGGGGATT+TGG + chr4_1:32792740-32792759 Msa0544390:CDS 45.0%
GCATAGCATACTTGAGCAAC+TGG - chr4_1:32792767-32792786 None:intergenic 45.0%
TTTCAATGCTCACCTTTGGC+AGG - chr4_1:32792829-32792848 None:intergenic 45.0%
AGAAAGATCTTCCTCCCTCT+AGG + chr4_1:32793645-32793664 Msa0544390:CDS 45.0%
GAAAGATCTTCCTCCCTCTA+GGG + chr4_1:32793646-32793665 Msa0544390:CDS 45.0%
!!! GAGTCGTTAGTTTTCTTGCC+AGG + chr4_1:32793710-32793729 Msa0544390:CDS 45.0%
CTTGGACAAGTGCTACACTT+TGG - chr4_1:32794110-32794129 None:intergenic 45.0%
!!! ATAAAAAATAATTACTTTTT+GGG - chr4_1:32789296-32789315 None:intergenic 5.0%
TGGACTCCATTGAGTGGAGA+CGG - chr4_1:32788376-32788395 None:intergenic 50.0%
AAAGGCTGGACTCCATTGAG+TGG - chr4_1:32788382-32788401 None:intergenic 50.0%
CTTCGTGAGCTTAGCTCAGT+TGG + chr4_1:32789061-32789080 Msa0544390:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr4_1:32789065-32789084 Msa0544390:intron 50.0%
TGTGCAAGAACTTCCAGCAG+TGG + chr4_1:32789876-32789895 Msa0544390:CDS 50.0%
TGTGTGTGGTTCCTAACAGC+CGG - chr4_1:32790487-32790506 None:intergenic 50.0%
! GAGAATAAGTTGGGTGTCCG+AGG - chr4_1:32791077-32791096 None:intergenic 50.0%
!! GCACCGGCTTTGAAATGATG+TGG - chr4_1:32791438-32791457 None:intergenic 50.0%
TGCACCCTTCATGTTGAACG+TGG + chr4_1:32791590-32791609 Msa0544390:CDS 50.0%
! TACCTTGGAGCAGGATTAGC+AGG + chr4_1:32791924-32791943 Msa0544390:CDS 50.0%
CTCCAAGGAATGTTCTACGG+AGG + chr4_1:32791948-32791967 Msa0544390:CDS 50.0%
CTCTCCGGATGACGTAGAAA+AGG + chr4_1:32792010-32792029 Msa0544390:CDS 50.0%
!! GATATGAATACGGCACTGGC+TGG + chr4_1:32792282-32792301 Msa0544390:CDS 50.0%
!! TATGAATACGGCACTGGCTG+GGG + chr4_1:32792284-32792303 Msa0544390:CDS 50.0%
!! CCTGTGAAGGCTATTGGTTC+TGG - chr4_1:32792575-32792594 None:intergenic 50.0%
CCAGAACCAATAGCCTTCAC+AGG + chr4_1:32792572-32792591 Msa0544390:CDS 50.0%
GCACAACCTGTGAAGGCTAT+TGG - chr4_1:32792581-32792600 None:intergenic 50.0%
ATACAGGTGGGGCCATCAAT+TGG - chr4_1:32792605-32792624 None:intergenic 50.0%
! AATTGATGGCCCCACCTGTA+TGG + chr4_1:32792604-32792623 Msa0544390:CDS 50.0%
CAACATAAGAGATGGGCCAC+AGG + chr4_1:32792629-32792648 Msa0544390:CDS 50.0%
TGTTGATCATCCCTAGAGGG+AGG - chr4_1:32793659-32793678 None:intergenic 50.0%
AAGTGCAGTGCTTGCAGTCT+TGG - chr4_1:32794128-32794147 None:intergenic 50.0%
TGCACGTGTATACGGTGGTG+AGG - chr4_1:32788123-32788142 None:intergenic 55.0%
! ACCTTTGGAGGAGACGGTCA+GGG - chr4_1:32788416-32788435 None:intergenic 55.0%
! TACCTTTGGAGGAGACGGTC+AGG - chr4_1:32788417-32788436 None:intergenic 55.0%
GGGATTCGAACCCCAAACAC+AGG + chr4_1:32789114-32789133 Msa0544390:intron 55.0%
CTGTTTGTGGTCCGGCTGTT+AGG + chr4_1:32790473-32790492 Msa0544390:intron 55.0%
!! AGCCGGTGCCATGAATGTGT+TGG + chr4_1:32791449-32791468 Msa0544390:CDS 55.0%
GTCCTGCTAATCCTGCTCCA+AGG - chr4_1:32791929-32791948 None:intergenic 55.0%
! GCAGGATTAGCAGGACTCCA+AGG + chr4_1:32791933-32791952 Msa0544390:CDS 55.0%
GGTGCGACTTGCAGATGTAG+CGG + chr4_1:32792386-32792405 Msa0544390:intron 55.0%
! GACTGCAAGCACTGCACTTG+TGG + chr4_1:32794129-32794148 Msa0544390:three_prime_UTR 55.0%
TTGGAGGAGACGGTCAGGGT+TGG - chr4_1:32788412-32788431 None:intergenic 60.0%
ACCCTGACCGTCTCCTCCAA+AGG + chr4_1:32788412-32788431 Msa0544390:CDS 60.0%
!! CGGCACTGGCTGGGGTAAAC+AGG + chr4_1:32792292-32792311 Msa0544390:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 32788118 32794185 32788118 ID=Msa0544390;Name=Msa0544390
chr4_1 mRNA 32788118 32794185 32788118 ID=Msa0544390-mRNA-1;Parent=Msa0544390;Name=Msa0544390-mRNA-1;_AED=0.18;_eAED=0.18;_QI=59|1|1|1|1|1|9|197|743
chr4_1 exon 32788118 32788433 32788118 ID=Msa0544390-mRNA-1:exon:8397;Parent=Msa0544390-mRNA-1
chr4_1 exon 32789876 32790197 32789876 ID=Msa0544390-mRNA-1:exon:8398;Parent=Msa0544390-mRNA-1
chr4_1 exon 32790347 32790469 32790347 ID=Msa0544390-mRNA-1:exon:8399;Parent=Msa0544390-mRNA-1
chr4_1 exon 32791354 32791470 32791354 ID=Msa0544390-mRNA-1:exon:8400;Parent=Msa0544390-mRNA-1
chr4_1 exon 32791564 32791776 32791564 ID=Msa0544390-mRNA-1:exon:8401;Parent=Msa0544390-mRNA-1
chr4_1 exon 32791924 32792032 32791924 ID=Msa0544390-mRNA-1:exon:8402;Parent=Msa0544390-mRNA-1
chr4_1 exon 32792126 32792313 32792126 ID=Msa0544390-mRNA-1:exon:8403;Parent=Msa0544390-mRNA-1
chr4_1 exon 32792485 32792835 32792485 ID=Msa0544390-mRNA-1:exon:8404;Parent=Msa0544390-mRNA-1
chr4_1 exon 32793437 32794185 32793437 ID=Msa0544390-mRNA-1:exon:8405;Parent=Msa0544390-mRNA-1
chr4_1 five_prime_UTR 32788118 32788176 32788118 ID=Msa0544390-mRNA-1:five_prime_utr;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32788177 32788433 32788177 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32789876 32790197 32789876 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32790347 32790469 32790347 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32791354 32791470 32791354 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32791564 32791776 32791564 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32791924 32792032 32791924 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32792126 32792313 32792126 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32792485 32792835 32792485 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 CDS 32793437 32793988 32793437 ID=Msa0544390-mRNA-1:cds;Parent=Msa0544390-mRNA-1
chr4_1 three_prime_UTR 32793989 32794185 32793989 ID=Msa0544390-mRNA-1:three_prime_utr;Parent=Msa0544390-mRNA-1
Gene Sequence

>Msa0544390

ATGGCCAACTCAAACTCTCTTCCACTCTATGAAAAATATTGGTACAAACACAATTACAAAAGGGTAATAGATAGCTTGATTTTAATCCTCCTTTTGTTGTTGCTTGGTTACCGTGTTATGTATGTGAACAACTACTCTATCCCTTGGTTTATTGCTTTGATTTGCGAAACATGGTTCACCTTATCTTGGATTTTCACCGTCTCCACTCAATGGAGTCCAGCCTTTATCAAAACCAACCCTGACCGTCTCCTCCAAAGTGTGCAAGAACTTCCAGCAGTGGATATATTTGTGACAACAGCAGATGATGAGCTAGAACCACCAATCATCACAATAAACACTGTTTTATCGTTATTAGCACTTGATTATCCATCTCACAAGCTAGCTTGTTACGTTTCTGATGATGGTTGTTCTCCTCTAATCTTCTATGCTCTTCACAAAGCTTCAAAATTTGCAAAACAGTGGGTACCATTTTGTAAAAAGTACAAGGTACAAATTAGGGCACCGTTTAGATACTTTTGTGATGACAACGAGTGCACGACCAATGACCAAGAATTCAGACAAGAATGGTTACAGATGAAGGATATGTATGAAAATCTAAGCCGTAAAATAGATGTGGACCCAAAATCTATCCCAAGCTTACTTGAAGGAGAGTTTGCAGTTTTCTCAAATACTAACAGGACAAATCATCCAGCCATAATCAAGGTTATATGGGAGAACAAAGAAATGGCTGAAGATGGATTGCCACATTTGATCTACATATCCAGAGAAAAGAGGCCAAAGCAACCACATCATTTCAAAGCCGGTGCCATGAATGTGTTGACAAAAGTCTCTGGGTTGATTACCAATGCACCCTTCATGTTGAACGTGGATTGTGACATGTTTGTAAATAATCCAAATATTGTTATGCATGCCTTGTGCATTTTGCTTGACTCCAAGGGGCAAAAAGAAGTAGCTTTTGCTCAATGTCCCCAACAATTCTATGCTACACTCAAAGACGATCCTTTTGGAAATCAAATGGCAATTTTGTATAAGTACCTTGGAGCAGGATTAGCAGGACTCCAAGGAATGTTCTACGGAGGAACAAACTGCTTTCATAGAAGAAAAGTTATTTATGGTCTCTCTCCGGATGACGTAGAAAAGGGAAACAACTTATCTAAAGTCGAGTTAAAACAAAAATTTGGAGCTTCAAAGGAACTTATGAAATCAGTTAGTCATGCTTTGGAAGATAGGACTTATTCAGCTAGTGATATTGATGTTAACAAAGCTGTTGAGGAAGCTATCGAAGTTGCTTCTTATGGATATGAATACGGCACTGGCTGGGGTAAACAGGTGGGTTGGATGTATGGAACAATGACAGAAGATATACTAACTGGGCTGACGATACACAAAAAAGGTTGGAGATCAGAATTATGTACACCAGAACCAATAGCCTTCACAGGTTGTGCTCCAATTGATGGCCCCACCTGTATGGCTCAACATAAGAGATGGGCCACAGGAATGCTTGAGATCTTCTTTAGCAAACATTGTCCTATTTTTGCCGCCGTTTTTGGTAAACTTTCTTTTAGGGAATTCTTAGCTTATATGTGGATCATGAACTGGGGATTTGGTCCAGTTGCTCAAGTATGCTATGCTTGTCTCCTTGCATATTGCATCATTACCAACTGTTATTTCCTGCCAAAGGATTGGGGCATATATATTCCTACTGCAATAGTTGGGATTTACAAAGTATATACTCTATATGAATATTTGGCCTCAGGACTGTCAATTAAAGCATGGTGGAACAATCAAAGGATGTCGAGAATAACATCTATGAATGCTGGATTCTGTGGATTTATTACTGTTCTACTCAAATTGTTAGGAATATCTAACACTGTTTTTGACATAACAAAGAAAGATCTTCCTCCCTCTAGGGATGATCAACATGATAAGAATGTTGGTAGATACACTTTCAACGAGTCGTTAGTTTTCTTGCCAGGAACTACCATCTTATCGTTGCAATTGACAGCAATATTTATCAAGTTGTTTGGATTTCAGCCACAAAGTTTAAATGGGAATTATGAGTGTGGTTTGGCTGAAATGTTGATTAGTGTGTATTTGATCATATGTTATTGGCCATTTTTGAGAGGACTATTTGAAACGGGTAAATTTGGGATTCCTTTGTCTACAATATGCAAAGGAGCAACTTTGACATGTATTTTTGTATGTCTAAGTAGAAGGACAATTTCTGGTTGA
Protein sequence

>Msa0544390

MANSNSLPLYEKYWYKHNYKRVIDSLILILLLLLLGYRVMYVNNYSIPWFIALICETWFTLSWIFTVSTQWSPAFIKTNPDRLLQSVQELPAVDIFVTTADDELEPPIITINTVLSLLALDYPSHKLACYVSDDGCSPLIFYALHKASKFAKQWVPFCKKYKVQIRAPFRYFCDDNECTTNDQEFRQEWLQMKDMYENLSRKIDVDPKSIPSLLEGEFAVFSNTNRTNHPAIIKVIWENKEMAEDGLPHLIYISREKRPKQPHHFKAGAMNVLTKVSGLITNAPFMLNVDCDMFVNNPNIVMHALCILLDSKGQKEVAFAQCPQQFYATLKDDPFGNQMAILYKYLGAGLAGLQGMFYGGTNCFHRRKVIYGLSPDDVEKGNNLSKVELKQKFGASKELMKSVSHALEDRTYSASDIDVNKAVEEAIEVASYGYEYGTGWGKQVGWMYGTMTEDILTGLTIHKKGWRSELCTPEPIAFTGCAPIDGPTCMAQHKRWATGMLEIFFSKHCPIFAAVFGKLSFREFLAYMWIMNWGFGPVAQVCYACLLAYCIITNCYFLPKDWGIYIPTAIVGIYKVYTLYEYLASGLSIKAWWNNQRMSRITSMNAGFCGFITVLLKLLGISNTVFDITKKDLPPSRDDQHDKNVGRYTFNESLVFLPGTTILSLQLTAIFIKLFGFQPQSLNGNYECGLAEMLISVYLIICYWPFLRGLFETGKFGIPLSTICKGATLTCIFVCLSRRTISG*