Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099690 | XP_003621320.1 | 97.938 | 291 | 6 | 0 | 1 | 291 | 1 | 291 | 0.0 | 586 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099690 | sp|Q3B561|Y637_CHLL3 | 32.051 | 156 | 92 | 7 | 114 | 267 | 13 | 156 | 3.00e-15 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099690 | G7L348 | 97.938 | 291 | 6 | 0 | 1 | 291 | 1 | 291 | 0.0 | 586 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1099690 | 0.836129 | 1.121256e-56 | -8.615850e-47 |
| Msa0017120 | Msa1099690 | 0.847130 | 1.405106e-59 | -8.615850e-47 |
| Msa0043680 | Msa1099690 | 0.806495 | 8.003133e-50 | -8.615850e-47 |
| Msa0043940 | Msa1099690 | 0.844981 | 5.396307e-59 | -8.615850e-47 |
| Msa0047470 | Msa1099690 | 0.815738 | 7.927812e-52 | -8.615850e-47 |
| Msa0059590 | Msa1099690 | 0.805633 | 1.214862e-49 | -8.615850e-47 |
| Msa0060350 | Msa1099690 | 0.825247 | 5.202793e-54 | -8.615850e-47 |
| Msa0065390 | Msa1099690 | 0.833340 | 5.642062e-56 | -8.615850e-47 |
| Msa0078520 | Msa1099690 | 0.826022 | 3.406550e-54 | -8.615850e-47 |
| Msa0079250 | Msa1099690 | 0.840657 | 7.620976e-58 | -8.615850e-47 |
| Msa0083160 | Msa1099690 | 0.810508 | 1.112999e-50 | -8.615850e-47 |
| Msa0084630 | Msa1099690 | 0.807102 | 5.955621e-50 | -8.615850e-47 |
| Msa0084680 | Msa1099690 | 0.805749 | 1.148889e-49 | -8.615850e-47 |
| Msa0092660 | Msa1099690 | 0.814451 | 1.530840e-51 | -8.615850e-47 |
| Msa0092710 | Msa1099690 | 0.841946 | 3.489820e-58 | -8.615850e-47 |
| Msa0092730 | Msa1099690 | 0.822093 | 2.848500e-53 | -8.615850e-47 |
| Msa0105210 | Msa1099690 | 0.811840 | 5.725536e-51 | -8.615850e-47 |
| Msa0110710 | Msa1099690 | 0.836862 | 7.298031e-57 | -8.615850e-47 |
| Msa0607280 | Msa1099690 | 0.806820 | 6.832259e-50 | -8.615850e-47 |
| Msa0614230 | Msa1099690 | 0.818689 | 1.719557e-52 | -8.615850e-47 |
| Msa0642650 | Msa1099690 | 0.804607 | 1.991659e-49 | -8.615850e-47 |
| Msa0660820 | Msa1099690 | 0.827357 | 1.636018e-54 | -8.615850e-47 |
| Msa0667970 | Msa1099690 | 0.857468 | 1.598732e-62 | -8.615850e-47 |
| Msa0681890 | Msa1099690 | 0.824196 | 9.200773e-54 | -8.615850e-47 |
| Msa0690350 | Msa1099690 | 0.814843 | 1.253001e-51 | -8.615850e-47 |
| Msa0690720 | Msa1099690 | 0.809608 | 1.739369e-50 | -8.615850e-47 |
| Msa0703760 | Msa1099690 | 0.805716 | 1.167226e-49 | -8.615850e-47 |
| Msa0704220 | Msa1099690 | 0.814798 | 1.282571e-51 | -8.615850e-47 |
| Msa0719340 | Msa1099690 | 0.830291 | 3.189743e-55 | -8.615850e-47 |
| Msa0720270 | Msa1099690 | 0.833673 | 4.658670e-56 | -8.615850e-47 |
| Msa0725920 | Msa1099690 | 0.808773 | 2.626827e-50 | -8.615850e-47 |
| Msa0738850 | Msa1099690 | 0.826521 | 2.592664e-54 | -8.615850e-47 |
| Msa0738860 | Msa1099690 | 0.805966 | 1.034191e-49 | -8.615850e-47 |
| Msa0738870 | Msa1099690 | 0.821748 | 3.424087e-53 | -8.615850e-47 |
| Msa0738880 | Msa1099690 | 0.826992 | 2.000731e-54 | -8.615850e-47 |
| Msa0760890 | Msa1099690 | 0.807401 | 5.146706e-50 | -8.615850e-47 |
| Msa0766470 | Msa1099690 | 0.812461 | 4.191656e-51 | -8.615850e-47 |
| Msa0769830 | Msa1099690 | 0.801597 | 8.353372e-49 | -8.615850e-47 |
| Msa0772150 | Msa1099690 | 0.825481 | 4.579565e-54 | -8.615850e-47 |
| Msa0775260 | Msa1099690 | 0.818483 | 1.914357e-52 | -8.615850e-47 |
| Msa0780140 | Msa1099690 | 0.804869 | 1.755847e-49 | -8.615850e-47 |
| Msa0783270 | Msa1099690 | 0.827014 | 1.977069e-54 | -8.615850e-47 |
| Msa0802210 | Msa1099690 | 0.822450 | 2.353684e-53 | -8.615850e-47 |
| Msa0803130 | Msa1099690 | 0.838260 | 3.196859e-57 | -8.615850e-47 |
| Msa0812660 | Msa1099690 | 0.807753 | 4.333820e-50 | -8.615850e-47 |
| Msa0819320 | Msa1099690 | 0.825726 | 4.006320e-54 | -8.615850e-47 |
| Msa0819340 | Msa1099690 | 0.803361 | 3.615807e-49 | -8.615850e-47 |
| Msa0819350 | Msa1099690 | 0.802386 | 5.748850e-49 | -8.615850e-47 |
| Msa0819360 | Msa1099690 | 0.801730 | 7.844790e-49 | -8.615850e-47 |
| Msa0819370 | Msa1099690 | 0.831208 | 1.901504e-55 | -8.615850e-47 |
| Msa0841490 | Msa1099690 | 0.834692 | 2.586971e-56 | -8.615850e-47 |
| Msa0126300 | Msa1099690 | 0.834718 | 2.549341e-56 | -8.615850e-47 |
| Msa0126900 | Msa1099690 | 0.816545 | 5.233319e-52 | -8.615850e-47 |
| Msa0130800 | Msa1099690 | 0.800281 | 1.551032e-48 | -8.615850e-47 |
| Msa0132620 | Msa1099690 | 0.801070 | 1.070754e-48 | -8.615850e-47 |
| Msa0135980 | Msa1099690 | 0.808627 | 2.822352e-50 | -8.615850e-47 |
| Msa0137600 | Msa1099690 | 0.816671 | 4.903971e-52 | -8.615850e-47 |
| Msa0141670 | Msa1099690 | 0.819226 | 1.297773e-52 | -8.615850e-47 |
| Msa0143080 | Msa1099690 | 0.808628 | 2.821384e-50 | -8.615850e-47 |
| Msa0143970 | Msa1099690 | 0.841303 | 5.155670e-58 | -8.615850e-47 |
| Msa0143980 | Msa1099690 | 0.815335 | 9.747055e-52 | -8.615850e-47 |
| Msa0146470 | Msa1099690 | 0.833007 | 6.827965e-56 | -8.615850e-47 |
| Msa0150210 | Msa1099690 | 0.802210 | 6.251451e-49 | -8.615850e-47 |
| Msa0157020 | Msa1099690 | 0.841175 | 5.573693e-58 | -8.615850e-47 |
| Msa0157350 | Msa1099690 | 0.815225 | 1.030939e-51 | -8.615850e-47 |
| Msa0182640 | Msa1099690 | 0.825698 | 4.067035e-54 | -8.615850e-47 |
| Msa0185390 | Msa1099690 | 0.810678 | 1.022852e-50 | -8.615850e-47 |
| Msa0194970 | Msa1099690 | 0.810599 | 1.063906e-50 | -8.615850e-47 |
| Msa0206940 | Msa1099690 | 0.802750 | 4.837189e-49 | -8.615850e-47 |
| Msa0213080 | Msa1099690 | 0.804138 | 2.493806e-49 | -8.615850e-47 |
| Msa0223280 | Msa1099690 | 0.801194 | 1.010133e-48 | -8.615850e-47 |
| Msa0236980 | Msa1099690 | 0.810989 | 8.760146e-51 | -8.615850e-47 |
| Msa0367490 | Msa1099690 | 0.822333 | 2.505182e-53 | -8.615850e-47 |
| Msa0369780 | Msa1099690 | 0.815016 | 1.147086e-51 | -8.615850e-47 |
| Msa0411560 | Msa1099690 | 0.819890 | 9.159722e-53 | -8.615850e-47 |
| Msa0417630 | Msa1099690 | 0.810258 | 1.260226e-50 | -8.615850e-47 |
| Msa0467800 | Msa1099690 | 0.801825 | 7.501005e-49 | -8.615850e-47 |
| Msa0467880 | Msa1099690 | 0.805322 | 1.411589e-49 | -8.615850e-47 |
| Msa0987350 | Msa1099690 | 0.807453 | 5.017567e-50 | -8.615850e-47 |
| Msa1000470 | Msa1099690 | 0.805973 | 1.030583e-49 | -8.615850e-47 |
| Msa1002040 | Msa1099690 | 0.801670 | 8.069885e-49 | -8.615850e-47 |
| Msa1007840 | Msa1099690 | 0.829248 | 5.724886e-55 | -8.615850e-47 |
| Msa1015060 | Msa1099690 | 0.815716 | 8.015401e-52 | -8.615850e-47 |
| Msa1027790 | Msa1099690 | 0.826854 | 2.158770e-54 | -8.615850e-47 |
| Msa1030870 | Msa1099690 | 0.844845 | 5.872759e-59 | -8.615850e-47 |
| Msa1044040 | Msa1099690 | 0.827330 | 1.660510e-54 | -8.615850e-47 |
| Msa1049300 | Msa1099690 | 0.866397 | 2.937773e-65 | -8.615850e-47 |
| Msa1080620 | Msa1099690 | 0.809478 | 1.855190e-50 | -8.615850e-47 |
| Msa1080690 | Msa1099690 | 0.807740 | 4.361410e-50 | -8.615850e-47 |
| Msa1092820 | Msa1099690 | 0.820612 | 6.257106e-53 | -8.615850e-47 |
| Msa1099690 | Msa1112610 | 0.822320 | 2.522775e-53 | -8.615850e-47 |
| Msa1099690 | Msa1115580 | 0.821306 | 4.330534e-53 | -8.615850e-47 |
| Msa1099690 | Msa1119860 | 0.806605 | 7.585067e-50 | -8.615850e-47 |
| Msa1099690 | Msa1136550 | 0.845752 | 3.338639e-59 | -8.615850e-47 |
| Msa1099690 | Msa1144950 | 0.830196 | 3.364264e-55 | -8.615850e-47 |
| Msa1099690 | Msa1157730 | 0.850284 | 1.875656e-60 | -8.615850e-47 |
| Msa1099690 | Msa1183390 | 0.809729 | 1.638587e-50 | -8.615850e-47 |
| Msa1099690 | Msa1190910 | 0.820620 | 6.228427e-53 | -8.615850e-47 |
| Msa1099690 | Msa1197110 | 0.829456 | 5.095661e-55 | -8.615850e-47 |
| Msa1099690 | Msa1215210 | 0.817535 | 3.135903e-52 | -8.615850e-47 |
| Msa1099690 | Msa1215530 | 0.800328 | 1.517343e-48 | -8.615850e-47 |
| Msa1099690 | Msa1219250 | 0.800301 | 1.537132e-48 | -8.615850e-47 |
| Msa1099690 | Msa1220740 | 0.807346 | 5.286955e-50 | -8.615850e-47 |
| Msa1099690 | Msa1224670 | 0.804598 | 2.000872e-49 | -8.615850e-47 |
| Msa1099690 | Msa1246370 | 0.809347 | 1.979185e-50 | -8.615850e-47 |
| Msa1099690 | Msa1250670 | 0.814469 | 1.516775e-51 | -8.615850e-47 |
| Msa1099690 | Msa1259470 | 0.802755 | 4.825620e-49 | -8.615850e-47 |
| Msa1099690 | Msa1271510 | 0.809277 | 2.049143e-50 | -8.615850e-47 |
| Msa1099690 | Msa1302170 | 0.807142 | 5.839083e-50 | -8.615850e-47 |
| Msa1099690 | Msa1309360 | 0.804297 | 2.310855e-49 | -8.615850e-47 |
| Msa1099690 | Msa1334650 | 0.802948 | 4.403006e-49 | -8.615850e-47 |
| Msa1099690 | Msa1361910 | 0.802942 | 4.415709e-49 | -8.615850e-47 |
| Msa1099690 | Msa1381130 | 0.812120 | 4.973296e-51 | -8.615850e-47 |
| Msa1099690 | Msa1405770 | 0.827085 | 1.900890e-54 | -8.615850e-47 |
| Msa1099690 | Msa1412080 | 0.868277 | 7.357451e-66 | -8.615850e-47 |
| Msa1099690 | Msa1412520 | 0.808384 | 3.180921e-50 | -8.615850e-47 |
| Msa1099690 | Msa1431730 | 0.838091 | 3.533683e-57 | -8.615850e-47 |
| Msa1099690 | Msa1432640 | 0.840910 | 6.540912e-58 | -8.615850e-47 |
| Msa1099690 | Msa1434020 | 0.841706 | 4.038343e-58 | -8.615850e-47 |
| Msa1099690 | Msa1439120 | 0.842764 | 2.118164e-58 | -8.615850e-47 |
| Msa1099690 | Msa1440180 | 0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa1099690 | Msa1440220 | 0.817782 | 2.757725e-52 | -8.615850e-47 |
| Msa1099690 | Msa1444450 | 0.837157 | 6.133166e-57 | -8.615850e-47 |
| Msa1099690 | Msa1449740 | 0.809204 | 2.124372e-50 | -8.615850e-47 |
| Msa1099690 | Msa1455660 | 0.847179 | 1.362347e-59 | -8.615850e-47 |
| Msa0250520 | Msa1099690 | 0.809483 | 1.850356e-50 | -8.615850e-47 |
| Msa0259330 | Msa1099690 | 0.802925 | 4.450758e-49 | -8.615850e-47 |
| Msa0277530 | Msa1099690 | 0.819828 | 9.459345e-53 | -8.615850e-47 |
| Msa0280140 | Msa1099690 | 0.820439 | 6.854599e-53 | -8.615850e-47 |
| Msa0296610 | Msa1099690 | 0.822495 | 2.297550e-53 | -8.615850e-47 |
| Msa0317260 | Msa1099690 | 0.803323 | 3.683010e-49 | -8.615850e-47 |
| Msa0333900 | Msa1099690 | 0.806730 | 7.136185e-50 | -8.615850e-47 |
| Msa0334020 | Msa1099690 | 0.806672 | 7.342430e-50 | -8.615850e-47 |
| Msa0334980 | Msa1099690 | 0.830307 | 3.162039e-55 | -8.615850e-47 |
| Msa0339860 | Msa1099690 | 0.803679 | 3.106984e-49 | -8.615850e-47 |
| Msa0344640 | Msa1099690 | 0.806222 | 9.132729e-50 | -8.615850e-47 |
| Msa0485280 | Msa1099690 | 0.815661 | 8.246567e-52 | -8.615850e-47 |
| Msa0486530 | Msa1099690 | 0.812733 | 3.653785e-51 | -8.615850e-47 |
| Msa0509540 | Msa1099690 | 0.824088 | 9.755269e-54 | -8.615850e-47 |
| Msa0532840 | Msa1099690 | 0.848253 | 6.893261e-60 | -8.615850e-47 |
| Msa0533010 | Msa1099690 | 0.846484 | 2.110647e-59 | -8.615850e-47 |
| Msa0542040 | Msa1099690 | 0.818417 | 1.982213e-52 | -8.615850e-47 |
| Msa0546380 | Msa1099690 | 0.801202 | 1.006500e-48 | -8.615850e-47 |
| Msa0561510 | Msa1099690 | 0.807456 | 5.010373e-50 | -8.615850e-47 |
| Msa0579610 | Msa1099690 | 0.807226 | 5.604950e-50 | -8.615850e-47 |
| Msa0587900 | Msa1099690 | 0.810200 | 1.297224e-50 | -8.615850e-47 |
| Msa0848360 | Msa1099690 | 0.826785 | 2.242246e-54 | -8.615850e-47 |
| Msa0848760 | Msa1099690 | 0.808985 | 2.365928e-50 | -8.615850e-47 |
| Msa0853170 | Msa1099690 | 0.801778 | 7.668993e-49 | -8.615850e-47 |
| Msa0859520 | Msa1099690 | 0.815332 | 9.761807e-52 | -8.615850e-47 |
| Msa0859530 | Msa1099690 | 0.824657 | 7.169565e-54 | -8.615850e-47 |
| Msa0877420 | Msa1099690 | 0.811078 | 8.380133e-51 | -8.615850e-47 |
| Msa0890250 | Msa1099690 | 0.814097 | 1.832701e-51 | -8.615850e-47 |
| Msa0925160 | Msa1099690 | 0.821819 | 3.295932e-53 | -8.615850e-47 |
| Msa0934830 | Msa1099690 | 0.813220 | 2.857923e-51 | -8.615850e-47 |
| Msa0935730 | Msa1099690 | 0.806972 | 6.344168e-50 | -8.615850e-47 |
| Msa0942730 | Msa1099690 | 0.804201 | 2.420223e-49 | -8.615850e-47 |
| Msa0955260 | Msa1099690 | 0.814186 | 1.751605e-51 | -8.615850e-47 |
| Msa0958020 | Msa1099690 | 0.810483 | 1.126946e-50 | -8.615850e-47 |
| Msa0971860 | Msa1099690 | 0.815467 | 9.108739e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099690 | MtrunA17_Chr7g0218101 | 97.938 | 291 | 6 | 0 | 1 | 291 | 1 | 291 | 0.0 | 586 |
| Msa1099690 | MtrunA17_Chr3g0077201 | 44.223 | 251 | 117 | 6 | 49 | 288 | 83 | 321 | 8.88e-57 | 185 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1099690 | AT3G29240.1 | 60.968 | 310 | 97 | 6 | 1 | 286 | 1 | 310 | 8.37e-121 | 348 |
| Msa1099690 | AT3G29240.2 | 60.968 | 310 | 97 | 6 | 1 | 286 | 1 | 310 | 8.37e-121 | 348 |
| Msa1099690 | AT1G33780.1 | 46.552 | 232 | 105 | 4 | 59 | 286 | 95 | 311 | 4.24e-56 | 184 |
| Msa1099690 | AT3G19780.2 | 32.258 | 155 | 87 | 5 | 114 | 259 | 903 | 1048 | 3.32e-12 | 67.4 |
| Msa1099690 | AT3G19780.1 | 32.258 | 155 | 87 | 5 | 114 | 259 | 904 | 1049 | 3.35e-12 | 67.4 |
| Msa1099690 | AT3G19780.3 | 32.258 | 155 | 87 | 5 | 114 | 259 | 694 | 839 | 3.39e-12 | 67.4 |
| Msa1099690 | AT3G19780.4 | 32.258 | 155 | 87 | 5 | 114 | 259 | 712 | 857 | 3.84e-12 | 67.0 |
Find 127 sgRNAs with CRISPR-Local
Find 179 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAATAGTCCTTTGTATTT+TGG | 0.063786 | 7_3:-28592023 | Msa1099690:CDS |
| ATTAATAAACAACCTCTTTC+AGG | 0.170100 | 7_3:+28592206 | None:intergenic |
| TTCAAGTTACTACTAAAATT+AGG | 0.173341 | 7_3:+28591333 | None:intergenic |
| TTCGACTATGTTTGAATTGA+TGG | 0.204762 | 7_3:-28591461 | Msa1099690:three_prime_UTR |
| AACAATTGAGAGATGAAATT+AGG | 0.215233 | 7_3:-28591800 | Msa1099690:CDS |
| ATGTTGGAATTGTTGGGCTC+TGG | 0.270864 | 7_3:-28591725 | Msa1099690:CDS |
| TTGGGGAATGTTGGAATTGT+TGG | 0.278049 | 7_3:-28591732 | Msa1099690:CDS |
| ATGAAATTAGGGATGGTTAT+TGG | 0.278275 | 7_3:-28591788 | Msa1099690:CDS |
| GGACGAAGTTCTCGGGCTTA+TGG | 0.278397 | 7_3:-28591703 | Msa1099690:CDS |
| TTTCCCACCCCATCATCTTT+AGG | 0.290799 | 7_3:+28591966 | None:intergenic |
| GATAAAACAATGTTTATGTT+TGG | 0.307238 | 7_3:-28591584 | Msa1099690:three_prime_UTR |
| TCAAGTTACTACTAAAATTA+GGG | 0.309605 | 7_3:+28591334 | None:intergenic |
| AACAAGTTACTCAAATAATA+TGG | 0.318535 | 7_3:-28593349 | Msa1099690:exon |
| GTGATGAAGGGTTTGTATTA+TGG | 0.321373 | 7_3:-28591924 | Msa1099690:CDS |
| TAACTTGAAAACAACTTGTT+TGG | 0.324966 | 7_3:-28591319 | Msa1099690:three_prime_UTR |
| ACAATTGAGAGATGAAATTA+GGG | 0.325075 | 7_3:-28591799 | Msa1099690:CDS |
| AGTCCAAGTGTTGTTGATTT+GGG | 0.333914 | 7_3:-28591750 | Msa1099690:CDS |
| TTTGAAATTGCATCGCATAT+TGG | 0.341950 | 7_3:-28591106 | Msa1099690:three_prime_UTR |
| AAGATCGCCAATCGGTGTTA+AGG | 0.343777 | 7_3:+28592363 | None:intergenic |
| ATGATCCCTGACGGGCCTAT+TGG | 0.346659 | 7_3:+28592116 | None:intergenic |
| TAGTCCAAGTGTTGTTGATT+TGG | 0.347343 | 7_3:-28591751 | Msa1099690:CDS |
| TGGGGAATGTTGGAATTGTT+GGG | 0.353274 | 7_3:-28591731 | Msa1099690:CDS |
| GGGCTCTGGGACGAAGTTCT+CGG | 0.353820 | 7_3:-28591711 | Msa1099690:CDS |
| GACGAAGTTCTCGGGCTTAT+GGG | 0.359750 | 7_3:-28591702 | Msa1099690:CDS |
| TCTTCATCTCATCCAAAGTT+TGG | 0.364734 | 7_3:+28593487 | None:intergenic |
| ATCAACTGCATTTGATGTAA+TGG | 0.365972 | 7_3:-28592054 | Msa1099690:CDS |
| TAATCACAATTGGTGACAAA+TGG | 0.368700 | 7_3:-28592247 | Msa1099690:CDS |
| TATTAAAATGTATGGGCTAA+TGG | 0.370968 | 7_3:+28593514 | None:intergenic |
| AACGTGAGGGTGGGTAAAAT+CGG | 0.381314 | 7_3:+28591642 | None:intergenic |
| AGTCGCTGAAGAAAGGAATT+CGG | 0.391351 | 7_3:+28592301 | None:intergenic |
| AGTTTGGTGGAATATGTATA+TGG | 0.391750 | 7_3:+28593406 | None:intergenic |
| GGGCACTAGTATTAACCCTT+AGG | 0.394769 | 7_3:+28591354 | None:intergenic |
| TTGGTGTGTATTAAAATGTA+TGG | 0.399837 | 7_3:+28593506 | None:intergenic |
| GTCGCTGAAGAAAGGAATTC+GGG | 0.401772 | 7_3:+28592302 | None:intergenic |
| GCGATCTTTCCGTGCAAAAC+TGG | 0.403195 | 7_3:-28592348 | Msa1099690:CDS |
| AACGGCCCAATAGGCCCGTC+AGG | 0.405772 | 7_3:-28592122 | Msa1099690:CDS |
| ATCTTACATGATACATGAAA+TGG | 0.417300 | 7_3:+28593219 | None:intergenic |
| TGTTGGAATTGTTGGGCTCT+GGG | 0.418680 | 7_3:-28591724 | Msa1099690:CDS |
| CTTTGATGGGTATTGTGGGT+GGG | 0.424635 | 7_3:-28591829 | Msa1099690:CDS |
| CAATTCAATTCAAGAAAAGT+TGG | 0.426906 | 7_3:-28593246 | Msa1099690:CDS |
| AACAACCTCTTTCAGGCTCA+TGG | 0.428547 | 7_3:+28592213 | None:intergenic |
| GGCTCTGGGACGAAGTTCTC+GGG | 0.430974 | 7_3:-28591710 | Msa1099690:CDS |
| AATAAGCTTGTAGAAGATCT+AGG | 0.431841 | 7_3:-28591391 | Msa1099690:three_prime_UTR |
| TTGGTGAGTCCTAAAGATGA+TGG | 0.434738 | 7_3:-28591975 | Msa1099690:CDS |
| TAGAGATCCACCTCTGATCT+TGG | 0.438298 | 7_3:+28593296 | None:intergenic |
| TTGTTGATGAGAAAATCTTT+TGG | 0.440379 | 7_3:+28593266 | None:intergenic |
| AATGGATATGCTTTGACAAA+TGG | 0.441277 | 7_3:+28593532 | None:intergenic |
| TCAACTGCATTTGATGTAAT+GGG | 0.441472 | 7_3:-28592053 | Msa1099690:CDS |
| AGATTCTTTGATGGGTATTG+TGG | 0.441919 | 7_3:-28591834 | Msa1099690:CDS |
| TGTGGGTCTTGCTGCTGAAA+TGG | 0.442545 | 7_3:-28591889 | Msa1099690:CDS |
| TTGTCACCAATTGTGATTAG+TGG | 0.444671 | 7_3:+28592251 | None:intergenic |
| AGGGTTGGTTTGTCATCATC+CGG | 0.446445 | 7_3:+28592383 | None:intergenic |
| ATGTTTGAATTGATGGCATA+TGG | 0.452611 | 7_3:-28591454 | Msa1099690:three_prime_UTR |
| TGATGATGAGAGATCAAGTT+TGG | 0.453403 | 7_3:+28593390 | None:intergenic |
| GATTCTTTGATGGGTATTGT+GGG | 0.454997 | 7_3:-28591833 | Msa1099690:CDS |
| GGATGATCCACAACAGTGTC+TGG | 0.455077 | 7_3:+28592275 | None:intergenic |
| CTTGTGGGGATGGGAAAAGT+TGG | 0.458568 | 7_3:-28591543 | Msa1099690:three_prime_UTR |
| AGATCGCCAATCGGTGTTAA+GGG | 0.458925 | 7_3:+28592364 | None:intergenic |
| CGCCAATCGGTGTTAAGGGT+TGG | 0.469028 | 7_3:+28592368 | None:intergenic |
| GGTGTAGTAGCAAGACCCTA+AGG | 0.472149 | 7_3:-28591370 | Msa1099690:three_prime_UTR |
| AAGCTTCTCAATTGGCAGAC+AGG | 0.477783 | 7_3:-28591296 | Msa1099690:three_prime_UTR |
| CATCCACCACTAATCACAAT+TGG | 0.481123 | 7_3:-28592257 | Msa1099690:CDS |
| TTAGATAGATTCTGACAAGT+TGG | 0.482939 | 7_3:-28591254 | Msa1099690:three_prime_UTR |
| TCTTTGATGGGTATTGTGGG+TGG | 0.484182 | 7_3:-28591830 | Msa1099690:CDS |
| GTTGTTGATTTGGGGAATGT+TGG | 0.484466 | 7_3:-28591741 | Msa1099690:CDS |
| TTGTTTGGAAGCTTCTCAAT+TGG | 0.485974 | 7_3:-28591304 | Msa1099690:three_prime_UTR |
| TTGTGGGGATGGGAAAAGTT+GGG | 0.487517 | 7_3:-28591542 | Msa1099690:three_prime_UTR |
| TTGGGCCGTTTGATAAAAGA+AGG | 0.489401 | 7_3:+28592135 | None:intergenic |
| AATCACAATTGGTGACAAAT+GGG | 0.489815 | 7_3:-28592246 | Msa1099690:CDS |
| GGCACTAGTATTAACCCTTA+GGG | 0.491646 | 7_3:+28591355 | None:intergenic |
| TAGCAACAGAAAAGCTTGAT+GGG | 0.501175 | 7_3:-28592184 | Msa1099690:CDS |
| CTGGATCAGTCGCTGAAGAA+AGG | 0.501880 | 7_3:+28592294 | None:intergenic |
| TACACATGAAGAGTGCTTGT+GGG | 0.507617 | 7_3:-28591558 | Msa1099690:three_prime_UTR |
| ATAGCAACAGAAAAGCTTGA+TGG | 0.509500 | 7_3:-28592185 | Msa1099690:CDS |
| TTCTCGGGCTTATGGGCAAA+AGG | 0.513225 | 7_3:-28591695 | Msa1099690:CDS |
| ACGTGAGGGTGGGTAAAATC+GGG | 0.514202 | 7_3:+28591643 | None:intergenic |
| ATGAAGAGTGCTTGTGGGGA+TGG | 0.514958 | 7_3:-28591553 | Msa1099690:three_prime_UTR |
| TGCACGGAAAGATCGCCAAT+CGG | 0.515533 | 7_3:+28592355 | None:intergenic |
| TCCAAGTTCAAAATGTCGGA+TGG | 0.518839 | 7_3:-28591148 | Msa1099690:three_prime_UTR |
| TCTTTGATAGACATCAAAGA+TGG | 0.519470 | 7_3:+28592083 | None:intergenic |
| AACCAACCCTTAACACCGAT+TGG | 0.525116 | 7_3:-28592370 | Msa1099690:CDS |
| AAGAGGAATGTGGTTGAGGT+TGG | 0.527418 | 7_3:-28591864 | Msa1099690:CDS |
| TTCCCCAAATCAACAACACT+TGG | 0.527843 | 7_3:+28591747 | None:intergenic |
| TTCCGTGCAAAACTGGTGGC+CGG | 0.536600 | 7_3:-28592341 | Msa1099690:CDS |
| GGCTCTAATTGAAAGGGTAC+CGG | 0.542888 | 7_3:-28591521 | Msa1099690:three_prime_UTR |
| TGGTGAGTCCTAAAGATGAT+GGG | 0.547996 | 7_3:-28591974 | Msa1099690:CDS |
| AAAGTTGGGCTCTAATTGAA+AGG | 0.551613 | 7_3:-28591528 | Msa1099690:three_prime_UTR |
| GGTGAAGAGGAATGTGGTTG+AGG | 0.554685 | 7_3:-28591868 | Msa1099690:CDS |
| TCACCAATTGTGATTAGTGG+TGG | 0.561176 | 7_3:+28592254 | None:intergenic |
| ATCTTTCCGTGCAAAACTGG+TGG | 0.565955 | 7_3:-28592345 | Msa1099690:CDS |
| CTATTGAGTATGATCCCTGA+CGG | 0.567625 | 7_3:+28592107 | None:intergenic |
| GTAATCCATGAGCCTGAAAG+AGG | 0.568190 | 7_3:-28592218 | Msa1099690:CDS |
| AAGTTGGGCTCTAATTGAAA+GGG | 0.573938 | 7_3:-28591527 | Msa1099690:three_prime_UTR |
| CGGGCTTATGGGCAAAAGGA+AGG | 0.575753 | 7_3:-28591691 | Msa1099690:CDS |
| TGGTGTGTATTAAAATGTAT+GGG | 0.582839 | 7_3:+28593507 | None:intergenic |
| TGAAGAGTGCTTGTGGGGAT+GGG | 0.584834 | 7_3:-28591552 | Msa1099690:three_prime_UTR |
| TTTCGAGGAAACGTGAGGGT+GGG | 0.587065 | 7_3:+28591633 | None:intergenic |
| TCCACCTCTGATCTTGGTGA+AGG | 0.588907 | 7_3:+28593302 | None:intergenic |
| TCCTTCACCAAGATCAGAGG+TGG | 0.589140 | 7_3:-28593303 | Msa1099690:CDS |
| TTGAGAGATGAAATTAGGGA+TGG | 0.595243 | 7_3:-28591795 | Msa1099690:CDS |
| TGATGAGAGATCAAGTTTGG+TGG | 0.601112 | 7_3:+28593393 | None:intergenic |
| TTATGGTACTAAAGAAAGTG+TGG | 0.602423 | 7_3:-28591907 | Msa1099690:CDS |
| TTGTTCTTTAGATGAGAGTG+AGG | 0.607062 | 7_3:+28593367 | None:intergenic |
| TTGCTGCTGAAATGGTGAAG+AGG | 0.609923 | 7_3:-28591881 | Msa1099690:CDS |
| TATTGAGTATGATCCCTGAC+GGG | 0.612501 | 7_3:+28592108 | None:intergenic |
| ATACACATGAAGAGTGCTTG+TGG | 0.618094 | 7_3:-28591559 | Msa1099690:three_prime_UTR |
| CATGTCATCATCATCACCAC+CGG | 0.618724 | 7_3:-28592402 | Msa1099690:CDS |
| TGCTTTGACAAATGGCACAT+AGG | 0.619813 | 7_3:+28593540 | None:intergenic |
| GTCCAAGTGTTGTTGATTTG+GGG | 0.620298 | 7_3:-28591749 | Msa1099690:CDS |
| GGGAACATGAGTGTCAATAC+CGG | 0.621053 | 7_3:+28591502 | None:intergenic |
| GTGTAGTAGCAAGACCCTAA+GGG | 0.624591 | 7_3:-28591369 | Msa1099690:three_prime_UTR |
| TATGGTACTAAAGAAAGTGT+GGG | 0.628740 | 7_3:-28591906 | Msa1099690:CDS |
| AAAAGTCTAGATGTAGTCGC+GGG | 0.629943 | 7_3:+28591482 | None:intergenic |
| GAGTCCTAAAGATGATGGGG+TGG | 0.634318 | 7_3:-28591970 | Msa1099690:CDS |
| AGTTCCTTCACCAAGATCAG+AGG | 0.637714 | 7_3:-28593306 | Msa1099690:CDS |
| GTTGGTTTGTCATCATCCGG+TGG | 0.639856 | 7_3:+28592386 | None:intergenic |
| AGTCCTAAAGATGATGGGGT+GGG | 0.647626 | 7_3:-28591969 | Msa1099690:CDS |
| AGCAACAGAAAAGCTTGATG+GGG | 0.650228 | 7_3:-28592183 | Msa1099690:CDS |
| TCACACATGATTTCGACTGA+CGG | 0.655908 | 7_3:-28591608 | Msa1099690:three_prime_UTR |
| GACTGATCCAGACACTGTTG+TGG | 0.655957 | 7_3:-28592282 | Msa1099690:CDS |
| GAAAAGTCTAGATGTAGTCG+CGG | 0.657076 | 7_3:+28591481 | None:intergenic |
| ACATACAAAACACTTCTATG+TGG | 0.659206 | 7_3:-28593458 | Msa1099690:five_prime_UTR |
| TTAATCTCTACAGTTACACA+CGG | 0.665648 | 7_3:+28591052 | None:intergenic |
| GGTGAGTCCTAAAGATGATG+GGG | 0.678073 | 7_3:-28591973 | Msa1099690:CDS |
| ACACATGAAGAGTGCTTGTG+GGG | 0.684509 | 7_3:-28591557 | Msa1099690:three_prime_UTR |
| GGCAAAAGGAAGGTCAAGTG+AGG | 0.692062 | 7_3:-28591681 | Msa1099690:exon |
| TGAAATGGTGAAGAGGAATG+TGG | 0.729338 | 7_3:-28591874 | Msa1099690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATAAAATATGTGAATT+TGG | - | chr7_3:28591717-28591736 | Msa1099690:CDS | 10.0% |
| !!! | TATATTGATAATGATACTTT+AGG | - | chr7_3:28591771-28591790 | Msa1099690:CDS | 15.0% |
| !!! | ATATTGATAATGATACTTTA+GGG | - | chr7_3:28591772-28591791 | Msa1099690:CDS | 15.0% |
| !!! | ATTATATTGATTGTACATTT+AGG | - | chr7_3:28591795-28591814 | Msa1099690:CDS | 15.0% |
| !! | AACAAGTTACTCAAATAATA+TGG | - | chr7_3:28591166-28591185 | Msa1099690:three_prime_UTR | 20.0% |
| !! | TATAATTTAGAAGCTAAGTT+GGG | + | chr7_3:28591676-28591695 | None:intergenic | 20.0% |
| !! | ATATAATTTAGAAGCTAAGT+TGG | + | chr7_3:28591677-28591696 | None:intergenic | 20.0% |
| !! | GATAAAACAATGTTTATGTT+TGG | - | chr7_3:28592931-28592950 | Msa1099690:intron | 20.0% |
| !! | TCAAGTTACTACTAAAATTA+GGG | + | chr7_3:28593184-28593203 | None:intergenic | 20.0% |
| !!! | TTCAAGTTACTACTAAAATT+AGG | + | chr7_3:28593185-28593204 | None:intergenic | 20.0% |
| !!! | GATTCAATTTTAGTGTAATT+TGG | - | chr7_3:28593433-28593452 | Msa1099690:five_prime_UTR | 20.0% |
| !!! | AATTTTTTAGAGTTGTGTTA+AGG | - | chr7_3:28593485-28593504 | Msa1099690:five_prime_UTR | 20.0% |
| !! | TATTAAAATGTATGGGCTAA+TGG | + | chr7_3:28591004-28591023 | None:intergenic | 25.0% |
| ! | TGGTGTGTATTAAAATGTAT+GGG | + | chr7_3:28591011-28591030 | None:intergenic | 25.0% |
| ! | TTGGTGTGTATTAAAATGTA+TGG | + | chr7_3:28591012-28591031 | None:intergenic | 25.0% |
| !! | TTTTAATACACACCAAACTT+TGG | - | chr7_3:28591016-28591035 | Msa1099690:three_prime_UTR | 25.0% |
| !!! | TTGTTGATGAGAAAATCTTT+TGG | + | chr7_3:28591252-28591271 | None:intergenic | 25.0% |
| ! | CAATTCAATTCAAGAAAAGT+TGG | - | chr7_3:28591269-28591288 | Msa1099690:three_prime_UTR | 25.0% |
| ! | ATCTTACATGATACATGAAA+TGG | + | chr7_3:28591299-28591318 | None:intergenic | 25.0% |
| ! | ATCTTGATCTTAGTATAAGT+AGG | + | chr7_3:28591331-28591350 | None:intergenic | 25.0% |
| ! | AAACAATTGTAGTGAAATAG+AGG | - | chr7_3:28591421-28591440 | Msa1099690:three_prime_UTR | 25.0% |
| ! | ATAATTTAGAAGCTAAGTTG+GGG | + | chr7_3:28591675-28591694 | None:intergenic | 25.0% |
| ! | TAAAAAACCGAATTTCTACA+TGG | + | chr7_3:28591854-28591873 | None:intergenic | 25.0% |
| ! | ATTAATAAACAACCTCTTTC+AGG | + | chr7_3:28592312-28592331 | None:intergenic | 25.0% |
| !! | TCTAATAGTCCTTTGTATTT+TGG | - | chr7_3:28592492-28592511 | Msa1099690:intron | 25.0% |
| !! | CTAATAGTCCTTTGTATTTT+GGG | - | chr7_3:28592493-28592512 | Msa1099690:intron | 25.0% |
| !! | TAATAGTCCTTTGTATTTTG+GGG | - | chr7_3:28592494-28592513 | Msa1099690:intron | 25.0% |
| !! | GTGATTTTAGATTCTTTGAT+GGG | - | chr7_3:28592673-28592692 | Msa1099690:intron | 25.0% |
| ! | AACAATTGAGAGATGAAATT+AGG | - | chr7_3:28592715-28592734 | Msa1099690:intron | 25.0% |
| ! | ACAATTGAGAGATGAAATTA+GGG | - | chr7_3:28592716-28592735 | Msa1099690:intron | 25.0% |
| !! | TAACTTGAAAACAACTTGTT+TGG | - | chr7_3:28593196-28593215 | Msa1099690:intron | 25.0% |
| !!! | GATTTTAACTATGAGAGTTT+TGG | - | chr7_3:28593339-28593358 | Msa1099690:exon | 25.0% |
| !! | TTTTTCCAAGTTCAAAATGT+CGG | - | chr7_3:28593363-28593382 | Msa1099690:five_prime_UTR | 25.0% |
| AATGGATATGCTTTGACAAA+TGG | + | chr7_3:28590986-28591005 | None:intergenic | 30.0% | |
| ACATACAAAACACTTCTATG+TGG | - | chr7_3:28591057-28591076 | Msa1099690:three_prime_UTR | 30.0% | |
| ! | AGTTTGGTGGAATATGTATA+TGG | + | chr7_3:28591112-28591131 | None:intergenic | 30.0% |
| TTAGTATAAGTAGGAGAAAG+AGG | + | chr7_3:28591322-28591341 | None:intergenic | 30.0% | |
| ! | TAATTTAGAAGCTAAGTTGG+GGG | + | chr7_3:28591674-28591693 | None:intergenic | 30.0% |
| TGTTGTACCATGTAGAAATT+CGG | - | chr7_3:28591844-28591863 | Msa1099690:CDS | 30.0% | |
| !!! | GAAATTCGGTTTTTTACCAT+TGG | - | chr7_3:28591858-28591877 | Msa1099690:CDS | 30.0% |
| GATGATACTTATTGATCCAA+TGG | + | chr7_3:28591877-28591896 | None:intergenic | 30.0% | |
| ! | TTTTCACCATCTATAAGTCT+CGG | + | chr7_3:28591919-28591938 | None:intergenic | 30.0% |
| ! | TAATCACAATTGGTGACAAA+TGG | - | chr7_3:28592268-28592287 | Msa1099690:CDS | 30.0% |
| ! | AATCACAATTGGTGACAAAT+GGG | - | chr7_3:28592269-28592288 | Msa1099690:CDS | 30.0% |
| ! | GTGATCCTTCTTTTATCAAA+CGG | - | chr7_3:28592375-28592394 | Msa1099690:CDS | 30.0% |
| TCTTTGATAGACATCAAAGA+TGG | + | chr7_3:28592435-28592454 | None:intergenic | 30.0% | |
| ATCAACTGCATTTGATGTAA+TGG | - | chr7_3:28592461-28592480 | Msa1099690:intron | 30.0% | |
| TCAACTGCATTTGATGTAAT+GGG | - | chr7_3:28592462-28592481 | Msa1099690:intron | 30.0% | |
| !! | AATAGTCCTTTGTATTTTGG+GGG | - | chr7_3:28592495-28592514 | Msa1099690:intron | 30.0% |
| AAAAACAACCCTTCTTCTAA+AGG | + | chr7_3:28592522-28592541 | None:intergenic | 30.0% | |
| !! | TTTAGAAGAAGGGTTGTTTT+TGG | - | chr7_3:28592521-28592540 | Msa1099690:intron | 30.0% |
| !! | TGTTTTTGATGAAGTGATGA+AGG | - | chr7_3:28592578-28592597 | Msa1099690:intron | 30.0% |
| ! | GTTTTTGATGAAGTGATGAA+GGG | - | chr7_3:28592579-28592598 | Msa1099690:intron | 30.0% |
| TTATGGTACTAAAGAAAGTG+TGG | - | chr7_3:28592608-28592627 | Msa1099690:intron | 30.0% | |
| ! | TATGGTACTAAAGAAAGTGT+GGG | - | chr7_3:28592609-28592628 | Msa1099690:intron | 30.0% |
| ! | GGTGATTTTAGATTCTTTGA+TGG | - | chr7_3:28592672-28592691 | Msa1099690:intron | 30.0% |
| ATGAAATTAGGGATGGTTAT+TGG | - | chr7_3:28592727-28592746 | Msa1099690:intron | 30.0% | |
| ! | AAGTGAGGAGCAATATTTTA+GGG | - | chr7_3:28592849-28592868 | Msa1099690:intron | 30.0% |
| ! | AAATCATGTGTGATTTTTCG+AGG | + | chr7_3:28592900-28592919 | None:intergenic | 30.0% |
| TTCGACTATGTTTGAATTGA+TGG | - | chr7_3:28593054-28593073 | Msa1099690:intron | 30.0% | |
| ! | ATGTTTGAATTGATGGCATA+TGG | - | chr7_3:28593061-28593080 | Msa1099690:intron | 30.0% |
| AATAAGCTTGTAGAAGATCT+AGG | - | chr7_3:28593124-28593143 | Msa1099690:intron | 30.0% | |
| TTAGATAGATTCTGACAAGT+TGG | - | chr7_3:28593261-28593280 | Msa1099690:CDS | 30.0% | |
| ! | TTTGAAATTGCATCGCATAT+TGG | - | chr7_3:28593409-28593428 | Msa1099690:five_prime_UTR | 30.0% |
| TTAATCTCTACAGTTACACA+CGG | + | chr7_3:28593466-28593485 | None:intergenic | 30.0% | |
| TCTTCATCTCATCCAAAGTT+TGG | + | chr7_3:28591031-28591050 | None:intergenic | 35.0% | |
| ! | TGATGATGAGAGATCAAGTT+TGG | + | chr7_3:28591128-28591147 | None:intergenic | 35.0% |
| TTGTTCTTTAGATGAGAGTG+AGG | + | chr7_3:28591151-28591170 | None:intergenic | 35.0% | |
| ATGCTGATATGTTCTCAAGA+TGG | - | chr7_3:28591495-28591514 | Msa1099690:three_prime_UTR | 35.0% | |
| ! | ATCTTTTGTGATCAAACCAC+AGG | - | chr7_3:28592084-28592103 | Msa1099690:CDS | 35.0% |
| !! | GGGTTTTAGTAATTGTTCTC+CGG | + | chr7_3:28592196-28592215 | None:intergenic | 35.0% |
| TTGTCACCAATTGTGATTAG+TGG | + | chr7_3:28592267-28592286 | None:intergenic | 35.0% | |
| ATAGCAACAGAAAAGCTTGA+TGG | - | chr7_3:28592330-28592349 | Msa1099690:CDS | 35.0% | |
| TAGCAACAGAAAAGCTTGAT+GGG | - | chr7_3:28592331-28592350 | Msa1099690:CDS | 35.0% | |
| GTGATGAAGGGTTTGTATTA+TGG | - | chr7_3:28592591-28592610 | Msa1099690:intron | 35.0% | |
| ! | AGATTCTTTGATGGGTATTG+TGG | - | chr7_3:28592681-28592700 | Msa1099690:intron | 35.0% |
| ! | GATTCTTTGATGGGTATTGT+GGG | - | chr7_3:28592682-28592701 | Msa1099690:intron | 35.0% |
| TTGAGAGATGAAATTAGGGA+TGG | - | chr7_3:28592720-28592739 | Msa1099690:intron | 35.0% | |
| ! | TAGTCCAAGTGTTGTTGATT+TGG | - | chr7_3:28592764-28592783 | Msa1099690:intron | 35.0% |
| !! | AGTCCAAGTGTTGTTGATTT+GGG | - | chr7_3:28592765-28592784 | Msa1099690:intron | 35.0% |
| ! | CAAGTGAGGAGCAATATTTT+AGG | - | chr7_3:28592848-28592867 | Msa1099690:intron | 35.0% |
| ! | AAAGTTGGGCTCTAATTGAA+AGG | - | chr7_3:28592987-28593006 | Msa1099690:intron | 35.0% |
| ! | AAGTTGGGCTCTAATTGAAA+GGG | - | chr7_3:28592988-28593007 | Msa1099690:intron | 35.0% |
| TTGTTTGGAAGCTTCTCAAT+TGG | - | chr7_3:28593211-28593230 | Msa1099690:intron | 35.0% | |
| TGCTTTGACAAATGGCACAT+AGG | + | chr7_3:28590978-28590997 | None:intergenic | 40.0% | |
| TGATGAGAGATCAAGTTTGG+TGG | + | chr7_3:28591125-28591144 | None:intergenic | 40.0% | |
| TCAATGCCGAGACTTATAGA+TGG | - | chr7_3:28591910-28591929 | Msa1099690:CDS | 40.0% | |
| AGTCGCTGAAGAAAGGAATT+CGG | + | chr7_3:28592217-28592236 | None:intergenic | 40.0% | |
| CATCCACCACTAATCACAAT+TGG | - | chr7_3:28592258-28592277 | Msa1099690:CDS | 40.0% | |
| TCACCAATTGTGATTAGTGG+TGG | + | chr7_3:28592264-28592283 | None:intergenic | 40.0% | |
| AGCAACAGAAAAGCTTGATG+GGG | - | chr7_3:28592332-28592351 | Msa1099690:CDS | 40.0% | |
| ! | GGTTCACATTTTCGAACGAA+CGG | - | chr7_3:28592353-28592372 | Msa1099690:CDS | 40.0% |
| TTGGGCCGTTTGATAAAAGA+AGG | + | chr7_3:28592383-28592402 | None:intergenic | 40.0% | |
| ! | CTTTTATCAAACGGCCCAAT+AGG | - | chr7_3:28592384-28592403 | Msa1099690:CDS | 40.0% |
| TATTGAGTATGATCCCTGAC+GGG | + | chr7_3:28592410-28592429 | None:intergenic | 40.0% | |
| CTATTGAGTATGATCCCTGA+CGG | + | chr7_3:28592411-28592430 | None:intergenic | 40.0% | |
| AAAGGTCCCCCAAAATACAA+AGG | + | chr7_3:28592504-28592523 | None:intergenic | 40.0% | |
| TTGGTGAGTCCTAAAGATGA+TGG | - | chr7_3:28592540-28592559 | Msa1099690:intron | 40.0% | |
| TGGTGAGTCCTAAAGATGAT+GGG | - | chr7_3:28592541-28592560 | Msa1099690:intron | 40.0% | |
| TGAAATGGTGAAGAGGAATG+TGG | - | chr7_3:28592641-28592660 | Msa1099690:intron | 40.0% | |
| !! | GTCCAAGTGTTGTTGATTTG+GGG | - | chr7_3:28592766-28592785 | Msa1099690:intron | 40.0% |
| TTCCCCAAATCAACAACACT+TGG | + | chr7_3:28592771-28592790 | None:intergenic | 40.0% | |
| !! | GTTGTTGATTTGGGGAATGT+TGG | - | chr7_3:28592774-28592793 | Msa1099690:intron | 40.0% |
| TTGGGGAATGTTGGAATTGT+TGG | - | chr7_3:28592783-28592802 | Msa1099690:intron | 40.0% | |
| TGGGGAATGTTGGAATTGTT+GGG | - | chr7_3:28592784-28592803 | Msa1099690:intron | 40.0% | |
| !!! | GATTTTTCGAGGAAACGTGA+GGG | + | chr7_3:28592889-28592908 | None:intergenic | 40.0% |
| !!! | TGATTTTTCGAGGAAACGTG+AGG | + | chr7_3:28592890-28592909 | None:intergenic | 40.0% |
| TCACACATGATTTCGACTGA+CGG | - | chr7_3:28592907-28592926 | Msa1099690:intron | 40.0% | |
| !! | ATACACATGAAGAGTGCTTG+TGG | - | chr7_3:28592956-28592975 | Msa1099690:intron | 40.0% |
| !! | TACACATGAAGAGTGCTTGT+GGG | - | chr7_3:28592957-28592976 | Msa1099690:intron | 40.0% |
| AAAAGTCTAGATGTAGTCGC+GGG | + | chr7_3:28593036-28593055 | None:intergenic | 40.0% | |
| GAAAAGTCTAGATGTAGTCG+CGG | + | chr7_3:28593037-28593056 | None:intergenic | 40.0% | |
| GGCACTAGTATTAACCCTTA+GGG | + | chr7_3:28593163-28593182 | None:intergenic | 40.0% | |
| TCCAAGTTCAAAATGTCGGA+TGG | - | chr7_3:28593367-28593386 | Msa1099690:five_prime_UTR | 40.0% | |
| ! | TCCATCCGACATTTTGAACT+TGG | + | chr7_3:28593371-28593390 | None:intergenic | 40.0% |
| AGTTCCTTCACCAAGATCAG+AGG | - | chr7_3:28591209-28591228 | Msa1099690:three_prime_UTR | 45.0% | |
| TAGAGATCCACCTCTGATCT+TGG | + | chr7_3:28591222-28591241 | None:intergenic | 45.0% | |
| TGATGACATGTTGCAACCTG+TGG | + | chr7_3:28592103-28592122 | None:intergenic | 45.0% | |
| CATGTCATCATCATCACCAC+CGG | - | chr7_3:28592113-28592132 | Msa1099690:CDS | 45.0% | |
| !! | AGGGTTGGTTTGTCATCATC+CGG | + | chr7_3:28592135-28592154 | None:intergenic | 45.0% |
| AACCAACCCTTAACACCGAT+TGG | - | chr7_3:28592145-28592164 | Msa1099690:CDS | 45.0% | |
| !! | AGATCGCCAATCGGTGTTAA+GGG | + | chr7_3:28592154-28592173 | None:intergenic | 45.0% |
| !! | AAGATCGCCAATCGGTGTTA+AGG | + | chr7_3:28592155-28592174 | None:intergenic | 45.0% |
| ATCTTTCCGTGCAAAACTGG+TGG | - | chr7_3:28592170-28592189 | Msa1099690:CDS | 45.0% | |
| GTCGCTGAAGAAAGGAATTC+GGG | + | chr7_3:28592216-28592235 | None:intergenic | 45.0% | |
| GTAATCCATGAGCCTGAAAG+AGG | - | chr7_3:28592297-28592316 | Msa1099690:CDS | 45.0% | |
| AACAACCTCTTTCAGGCTCA+TGG | + | chr7_3:28592305-28592324 | None:intergenic | 45.0% | |
| ! | TTTGGGGGACCTTTAGAAGA+AGG | - | chr7_3:28592510-28592529 | Msa1099690:intron | 45.0% |
| ! | TTGGGGGACCTTTAGAAGAA+GGG | - | chr7_3:28592511-28592530 | Msa1099690:intron | 45.0% |
| GGTGAGTCCTAAAGATGATG+GGG | - | chr7_3:28592542-28592561 | Msa1099690:intron | 45.0% | |
| !! | AGTCCTAAAGATGATGGGGT+GGG | - | chr7_3:28592546-28592565 | Msa1099690:intron | 45.0% |
| TTTCCCACCCCATCATCTTT+AGG | + | chr7_3:28592552-28592571 | None:intergenic | 45.0% | |
| TTGCTGCTGAAATGGTGAAG+AGG | - | chr7_3:28592634-28592653 | Msa1099690:intron | 45.0% | |
| AAGAGGAATGTGGTTGAGGT+TGG | - | chr7_3:28592651-28592670 | Msa1099690:intron | 45.0% | |
| ! | TCTTTGATGGGTATTGTGGG+TGG | - | chr7_3:28592685-28592704 | Msa1099690:intron | 45.0% |
| ! | CTTTGATGGGTATTGTGGGT+GGG | - | chr7_3:28592686-28592705 | Msa1099690:intron | 45.0% |
| ATGTTGGAATTGTTGGGCTC+TGG | - | chr7_3:28592790-28592809 | Msa1099690:intron | 45.0% | |
| TGTTGGAATTGTTGGGCTCT+GGG | - | chr7_3:28592791-28592810 | Msa1099690:intron | 45.0% | |
| AACGTGAGGGTGGGTAAAAT+CGG | + | chr7_3:28592876-28592895 | None:intergenic | 45.0% | |
| !! | ACACATGAAGAGTGCTTGTG+GGG | - | chr7_3:28592958-28592977 | Msa1099690:intron | 45.0% |
| TTGTGGGGATGGGAAAAGTT+GGG | - | chr7_3:28592973-28592992 | Msa1099690:intron | 45.0% | |
| ! | GGCTCTAATTGAAAGGGTAC+CGG | - | chr7_3:28592994-28593013 | Msa1099690:intron | 45.0% |
| GGGAACATGAGTGTCAATAC+CGG | + | chr7_3:28593016-28593035 | None:intergenic | 45.0% | |
| GTGTAGTAGCAAGACCCTAA+GGG | - | chr7_3:28593146-28593165 | Msa1099690:intron | 45.0% | |
| GGGCACTAGTATTAACCCTT+AGG | + | chr7_3:28593164-28593183 | None:intergenic | 45.0% | |
| AAGCTTCTCAATTGGCAGAC+AGG | - | chr7_3:28593219-28593238 | Msa1099690:intron | 45.0% | |
| TCCTTCACCAAGATCAGAGG+TGG | - | chr7_3:28591212-28591231 | Msa1099690:three_prime_UTR | 50.0% | |
| TCCACCTCTGATCTTGGTGA+AGG | + | chr7_3:28591216-28591235 | None:intergenic | 50.0% | |
| !! | GTTGGTTTGTCATCATCCGG+TGG | + | chr7_3:28592132-28592151 | None:intergenic | 50.0% |
| TGCACGGAAAGATCGCCAAT+CGG | + | chr7_3:28592163-28592182 | None:intergenic | 50.0% | |
| GCGATCTTTCCGTGCAAAAC+TGG | - | chr7_3:28592167-28592186 | Msa1099690:CDS | 50.0% | |
| CTGGATCAGTCGCTGAAGAA+AGG | + | chr7_3:28592224-28592243 | None:intergenic | 50.0% | |
| GACTGATCCAGACACTGTTG+TGG | - | chr7_3:28592233-28592252 | Msa1099690:CDS | 50.0% | |
| GGATGATCCACAACAGTGTC+TGG | + | chr7_3:28592243-28592262 | None:intergenic | 50.0% | |
| !! | GAGTCCTAAAGATGATGGGG+TGG | - | chr7_3:28592545-28592564 | Msa1099690:intron | 50.0% |
| !! | GATGATGGGGTGGGAAAAAG+TGG | - | chr7_3:28592555-28592574 | Msa1099690:intron | 50.0% |
| TGTGGGTCTTGCTGCTGAAA+TGG | - | chr7_3:28592626-28592645 | Msa1099690:intron | 50.0% | |
| GGTGAAGAGGAATGTGGTTG+AGG | - | chr7_3:28592647-28592666 | Msa1099690:intron | 50.0% | |
| GACGAAGTTCTCGGGCTTAT+GGG | - | chr7_3:28592813-28592832 | Msa1099690:intron | 50.0% | |
| TTCTCGGGCTTATGGGCAAA+AGG | - | chr7_3:28592820-28592839 | Msa1099690:intron | 50.0% | |
| GGCAAAAGGAAGGTCAAGTG+AGG | - | chr7_3:28592834-28592853 | Msa1099690:intron | 50.0% | |
| ACGTGAGGGTGGGTAAAATC+GGG | + | chr7_3:28592875-28592894 | None:intergenic | 50.0% | |
| TTTCGAGGAAACGTGAGGGT+GGG | + | chr7_3:28592885-28592904 | None:intergenic | 50.0% | |
| !! | TTTTCGAGGAAACGTGAGGG+TGG | + | chr7_3:28592886-28592905 | None:intergenic | 50.0% |
| !! | ATGAAGAGTGCTTGTGGGGA+TGG | - | chr7_3:28592962-28592981 | Msa1099690:intron | 50.0% |
| !! | TGAAGAGTGCTTGTGGGGAT+GGG | - | chr7_3:28592963-28592982 | Msa1099690:intron | 50.0% |
| CTTGTGGGGATGGGAAAAGT+TGG | - | chr7_3:28592972-28592991 | Msa1099690:intron | 50.0% | |
| GGTGTAGTAGCAAGACCCTA+AGG | - | chr7_3:28593145-28593164 | Msa1099690:intron | 50.0% | |
| !! | CGCCAATCGGTGTTAAGGGT+TGG | + | chr7_3:28592150-28592169 | None:intergenic | 55.0% |
| TTCCGTGCAAAACTGGTGGC+CGG | - | chr7_3:28592174-28592193 | Msa1099690:CDS | 55.0% | |
| ! | TGATCCCTGACGGGCCTATT+GGG | + | chr7_3:28592401-28592420 | None:intergenic | 55.0% |
| ! | ATGATCCCTGACGGGCCTAT+TGG | + | chr7_3:28592402-28592421 | None:intergenic | 55.0% |
| GGACGAAGTTCTCGGGCTTA+TGG | - | chr7_3:28592812-28592831 | Msa1099690:intron | 55.0% | |
| CGGGCTTATGGGCAAAAGGA+AGG | - | chr7_3:28592824-28592843 | Msa1099690:intron | 55.0% | |
| ! | CTCCGGCCACCAGTTTTGCA+CGG | + | chr7_3:28592179-28592198 | None:intergenic | 60.0% |
| !! | GGGCTCTGGGACGAAGTTCT+CGG | - | chr7_3:28592804-28592823 | Msa1099690:intron | 60.0% |
| !! | GGCTCTGGGACGAAGTTCTC+GGG | - | chr7_3:28592805-28592824 | Msa1099690:intron | 60.0% |
| AACGGCCCAATAGGCCCGTC+AGG | - | chr7_3:28592393-28592412 | Msa1099690:CDS | 65.0% | |
| ACGGCCCAATAGGCCCGTCA+GGG | - | chr7_3:28592394-28592413 | Msa1099690:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 28590967 | 28593570 | 28590967 | ID=Msa1099690;Name=Msa1099690 |
| chr7_3 | mRNA | 28590967 | 28593570 | 28590967 | ID=Msa1099690-mRNA-1;Parent=Msa1099690;Name=Msa1099690-mRNA-1;_AED=0.00;_eAED=0.00;_QI=218|1|1|1|0|0|2|716|291 |
| chr7_3 | exon | 28590967 | 28592431 | 28590967 | ID=Msa1099690-mRNA-1:exon:6059;Parent=Msa1099690-mRNA-1 |
| chr7_3 | exon | 28593226 | 28593570 | 28593226 | ID=Msa1099690-mRNA-1:exon:6058;Parent=Msa1099690-mRNA-1 |
| chr7_3 | five_prime_UTR | 28593353 | 28593570 | 28593353 | ID=Msa1099690-mRNA-1:five_prime_utr;Parent=Msa1099690-mRNA-1 |
| chr7_3 | CDS | 28593226 | 28593352 | 28593226 | ID=Msa1099690-mRNA-1:cds;Parent=Msa1099690-mRNA-1 |
| chr7_3 | CDS | 28591683 | 28592431 | 28591683 | ID=Msa1099690-mRNA-1:cds;Parent=Msa1099690-mRNA-1 |
| chr7_3 | three_prime_UTR | 28590967 | 28591682 | 28590967 | ID=Msa1099690-mRNA-1:three_prime_utr;Parent=Msa1099690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
