AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215530 MtrunA17_Chr4g0064571 95.449 813 11 1 13 825 7 793 0.0 1594
Msa1215530 MtrunA17_Chr2g0292751 44.886 704 366 10 133 820 629 1326 0.0 571
Msa1215530 MtrunA17_Chr8g0380401 42.394 710 373 11 135 819 674 1372 3.01e-170 529
Msa1215530 MtrunA17_Chr2g0292401 40.028 712 402 10 128 819 131 837 1.10e-152 468
Msa1215530 MtrunA17_Chr4g0067361 41.270 315 172 5 117 426 538 844 1.37e-64 233
Msa1215530 MtrunA17_Chr7g0254961 30.544 239 150 6 209 442 39 266 2.95e-22 99.0
Msa1215530 MtrunA17_Chr3g0126061 30.544 239 150 6 209 442 40 267 7.37e-22 97.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215530 AT5G20300.4 52.709 812 340 7 16 822 1 773 0.0 870
Msa1215530 AT5G20300.1 52.709 812 340 7 16 822 1 773 0.0 870
Msa1215530 AT5G20300.5 52.709 812 340 7 16 822 1 773 0.0 870
Msa1215530 AT5G20300.2 52.709 812 340 7 16 822 1 773 0.0 870
Msa1215530 AT5G20300.3 57.143 651 271 4 173 822 2 645 0.0 791
Msa1215530 AT2G16640.2 42.915 741 375 12 106 820 477 1195 0.0 570
Msa1215530 AT2G16640.1 42.915 741 375 12 106 820 477 1195 0.0 570
Msa1215530 AT2G16640.3 42.915 741 375 12 106 820 477 1195 0.0 570
Msa1215530 AT3G16620.1 41.745 745 405 12 92 820 346 1077 8.40e-179 543
Msa1215530 AT4G02510.1 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1215530 AT4G02510.4 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1215530 AT4G02510.3 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1215530 AT4G02510.2 42.625 739 386 13 102 815 758 1483 1.76e-174 543
Msa1215530 AT5G05000.1 30.769 247 155 5 209 450 38 273 5.58e-25 107
Msa1215530 AT5G05000.2 30.769 247 155 5 209 450 38 273 5.58e-25 107
Msa1215530 AT5G05000.3 30.769 247 155 5 209 450 38 273 5.58e-25 107
Msa1215530 AT1G02280.1 31.250 208 129 4 209 411 36 234 2.47e-24 104
Msa1215530 AT1G02280.2 31.250 208 129 4 209 411 36 234 2.47e-24 104
Msa1215530 AT4G15810.1 35.000 180 106 5 108 284 532 703 1.28e-18 91.7

Find 209 sgRNAs with CRISPR-Local

Find 398 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTATTTCTCTTCACATTAT+TGG 0.185965 8_1:+76812525 None:intergenic
ATCAGGGAAAAGATGAAATT+TGG 0.190393 8_1:-76810795 Msa1215530:three_prime_UTR
GTTGTTCAATAATCAGTATT+TGG 0.199042 8_1:-76810596 Msa1215530:three_prime_UTR
TAGCACTAACAGTTGCTTTC+AGG 0.215246 8_1:+76811006 None:intergenic
TCAGTGCCCTAGAAATATTT+TGG 0.225345 8_1:-76812176 Msa1215530:CDS
AAACTCATAACCGAGGTATT+TGG 0.236608 8_1:-76812391 Msa1215530:CDS
TTTCAGAATGGTGTGGAATT+AGG 0.261501 8_1:-76812055 Msa1215530:CDS
CATGTTGGTTTGCTATTTCT+CGG 0.265205 8_1:+76812767 None:intergenic
CGGCTTGATCTGATCAATTC+TGG 0.269125 8_1:-76812436 Msa1215530:CDS
AGAAGATTATCTGGATGAAT+TGG 0.273652 8_1:-76811825 Msa1215530:CDS
TGACAGTTCCCACAATTTCT+TGG 0.276558 8_1:+76812599 None:intergenic
TGCATTTGTACCAAAGTTCT+AGG 0.285984 8_1:-76812100 Msa1215530:CDS
ATCATCAATTCCACTTTGAT+TGG 0.291825 8_1:+76811961 None:intergenic
TAATCTAAATAGTCGCAAAA+TGG 0.302676 8_1:-76810985 Msa1215530:CDS
ATCTCGCCAACGCCGTTATC+AGG 0.315091 8_1:-76814555 Msa1215530:CDS
TTTGGAAGTCTCTTTAGTTT+AGG 0.317762 8_1:-76810649 Msa1215530:three_prime_UTR
TCTGGTAACTGAACAGGTTC+TGG 0.320411 8_1:+76811677 None:intergenic
GAAAGTCCTCGAAAGATATT+AGG 0.321575 8_1:-76810850 Msa1215530:three_prime_UTR
ATCTGTTGGTGGTAAAGATA+TGG 0.331588 8_1:-76811363 Msa1215530:CDS
CTCGGGCTCCACTGCTACTA+AGG 0.331711 8_1:+76812785 None:intergenic
TTTCCCTCTGAAACGGAAAA+TGG 0.337202 8_1:+76810740 None:intergenic
GGTGTTTCTTTGACATCTTT+CGG 0.338289 8_1:-76811281 Msa1215530:CDS
ATTTACGTCACCTAGAACTT+TGG 0.339961 8_1:+76812090 None:intergenic
CTTGAGGATACTTTGCTAAT+CGG 0.340373 8_1:-76811233 Msa1215530:CDS
TCTCTTCATCGCAACACAGC+TGG 0.344702 8_1:+76813641 None:intergenic
TTGTTCAATAATCAGTATTT+GGG 0.348419 8_1:-76810595 Msa1215530:three_prime_UTR
AGGTATTTGGTGCGGCAATC+TGG 0.352278 8_1:-76812378 Msa1215530:CDS
GTAATTTACAATCTGAGTTC+AGG 0.359349 8_1:-76811040 Msa1215530:CDS
CAATCTCAACATAGTGGAAA+TGG 0.360741 8_1:-76812976 Msa1215530:CDS
CATTTGTTTCTTTAAGTAAA+GGG 0.362091 8_1:+76811790 None:intergenic
TGCTGGCCGTATGGAAGGTC+AGG 0.366462 8_1:-76811186 Msa1215530:CDS
TTAGTAGTATATGAACTTAT+CGG 0.367116 8_1:-76810464 Msa1215530:three_prime_UTR
ACCTGTTCAGTTACCAGATA+TGG 0.371990 8_1:-76811672 Msa1215530:CDS
CAGGATGGCCGAGTGGTCTA+AGG 0.372570 8_1:-76815373 None:intergenic
GAAGGTTCTGTTACATAGAA+AGG 0.373015 8_1:-76810892 Msa1215530:CDS
AATCTAAATAGTCGCAAAAT+GGG 0.373823 8_1:-76810984 Msa1215530:CDS
TGGTCGCAAAGGTTCTTTAT+CGG 0.375336 8_1:-76812861 Msa1215530:CDS
TGATAATTCTGATGATCAAC+AGG 0.375448 8_1:-76811705 Msa1215530:CDS
CTTAGAGGAACAGCCATATC+TGG 0.378915 8_1:+76811659 None:intergenic
CCACACCATTCTGAAACTTA+AGG 0.380198 8_1:+76812062 None:intergenic
GAACAGGTCTCACAAGTAAT+TGG 0.381848 8_1:+76811585 None:intergenic
ATACTTGTCCTTGGTAAAAC+AGG 0.383290 8_1:-76812706 Msa1215530:CDS
GATCTCCAAACCTGTCCATT+AGG 0.394376 8_1:+76812139 None:intergenic
ACAAATGAACATCTAAGATT+GGG 0.395798 8_1:+76810566 None:intergenic
ATCTGGATGAATTGGAATAC+AGG 0.397869 8_1:-76811817 Msa1215530:CDS
CAATCTGAATCAAAACTTAG+AGG 0.397923 8_1:+76811644 None:intergenic
TACAAATGAACATCTAAGAT+TGG 0.398463 8_1:+76810565 None:intergenic
TTCCGCCTTCTCCAGCGGCT+TGG 0.405120 8_1:-76812904 Msa1215530:CDS
TTAAAATTTGTGATTAATGC+TGG 0.411220 8_1:-76811203 Msa1215530:CDS
GGGGAGAAAATCCTTCCTAA+TGG 0.412001 8_1:-76812154 Msa1215530:CDS
CGTTGGCGAGATCAATGAAT+TGG 0.414229 8_1:+76814566 None:intergenic
TCAATGAATTGGACAATAGC+TGG 0.419507 8_1:+76814577 None:intergenic
AAGGCGCCAGACTCAAGTTC+TGG 0.423851 8_1:-76815354 Msa1215530:intron
TCCTTCCTAATGGACAGGTT+TGG 0.424157 8_1:-76812144 Msa1215530:CDS
TATTAAAGCACAGAAACTTT+GGG 0.428669 8_1:-76810521 Msa1215530:three_prime_UTR
TCAAAGTACAAAACGATGTC+TGG 0.432440 8_1:+76812460 None:intergenic
CGAAGACCAGAACTTGAGTC+TGG 0.433002 8_1:+76815348 None:intergenic
CCACATCGTGATCCCATCCT+TGG 0.434462 8_1:+76811555 None:intergenic
TCATTTGTTTCTTTAAGTAA+AGG 0.434781 8_1:+76811789 None:intergenic
ATATTAAAGCACAGAAACTT+TGG 0.435798 8_1:-76810522 Msa1215530:three_prime_UTR
CACATCGTGATCCCATCCTT+GGG 0.436716 8_1:+76811556 None:intergenic
GGCAGCTGGTATGCCTCAAT+TGG 0.440174 8_1:-76812743 Msa1215530:CDS
TATGAACTTATCGGTTCAAC+AGG 0.442021 8_1:-76810455 Msa1215530:three_prime_UTR
ATTGAACAACAATGCACAAA+AGG 0.442700 8_1:+76810609 None:intergenic
CACAATTTCTTGGATGCAAT+CGG 0.444607 8_1:+76812609 None:intergenic
TCTGCAAGGATGCAGAGATA+TGG 0.446356 8_1:-76810764 Msa1215530:three_prime_UTR
GCCATATCTGGTAACTGAAC+AGG 0.446797 8_1:+76811671 None:intergenic
GAAGTCTCTTTAGTTTAGGC+TGG 0.451091 8_1:-76810645 Msa1215530:three_prime_UTR
CTCTTCATCGCAACACAGCT+GGG 0.455927 8_1:+76813642 None:intergenic
ATCAAATATAGAGTTTATAG+TGG 0.457971 8_1:+76812669 None:intergenic
TTTGATTCGTGCTGAGGAAA+CGG 0.459088 8_1:-76812824 Msa1215530:CDS
ACCAAGGACAAGTATTCTGC+AGG 0.459184 8_1:+76812714 None:intergenic
ATGTTGGTTTGCTATTTCTC+GGG 0.459728 8_1:+76812768 None:intergenic
GGATACTTTGGCAAAGGTTG+AGG 0.461427 8_1:-76812944 Msa1215530:CDS
GTAGCATTGCCGATTCCGTC+TGG 0.464728 8_1:-76813075 Msa1215530:CDS
GCTTAAGTTGTCATTTCTGA+TGG 0.467696 8_1:+76811109 None:intergenic
TTTGATGTGCCAGACGGAAT+CGG 0.471290 8_1:+76813066 None:intergenic
TCCTGCAGAATACTTGTCCT+TGG 0.471790 8_1:-76812715 Msa1215530:CDS
AATTGAGAAAACTGCAACCA+AGG 0.474454 8_1:+76810917 None:intergenic
AAGAGAGGACTGTCATTGTC+AGG 0.475241 8_1:+76811087 None:intergenic
CATTATTGGTAGAGGAAGGC+AGG 0.481129 8_1:+76812539 None:intergenic
ATCAGGCAATGTTAGATTCA+AGG 0.481132 8_1:-76812234 Msa1215530:CDS
TCTTGGATGCAATCGGTAGC+AGG 0.484735 8_1:+76812616 None:intergenic
CATCCTTGGGGATCAAGAAC+AGG 0.487336 8_1:+76811569 None:intergenic
GTAGAGGAAGGCAGGAAACC+AGG 0.489089 8_1:+76812547 None:intergenic
GAAAGGAGATGGGGCAGAGA+AGG 0.491277 8_1:+76812010 None:intergenic
TTACTTTCAGACAAAGAAGA+AGG 0.492858 8_1:-76811923 Msa1215530:CDS
TGGAAGACGGAAGGATACTT+TGG 0.494840 8_1:-76812956 Msa1215530:CDS
AAATTGTGGGAACTGTCAAC+GGG 0.494864 8_1:-76812594 Msa1215530:CDS
TCCCTCCTTAAGTTTCAGAA+TGG 0.495351 8_1:-76812067 Msa1215530:CDS
GAAAATCCTTCCTAATGGAC+AGG 0.496835 8_1:-76812149 Msa1215530:CDS
ACTGGCCAAGCCGCTGGAGA+AGG 0.499320 8_1:+76812899 None:intergenic
TGAGCATTTACAAATTGCCT+TGG 0.501650 8_1:-76810934 Msa1215530:CDS
TCTCTTCACATTATTGGTAG+AGG 0.504702 8_1:+76812531 None:intergenic
TAACAGGGACGAAAGGAGAT+GGG 0.505555 8_1:+76812000 None:intergenic
CGATTGCATCCAAGAAATTG+TGG 0.509792 8_1:-76812608 Msa1215530:CDS
ACAGAACCTAATATCTTTCG+AGG 0.513480 8_1:+76810844 None:intergenic
GGCCAAGCCGCTGGAGAAGG+CGG 0.516150 8_1:+76812902 None:intergenic
TGCAGCCTATGTCAATCCGA+TGG 0.518557 8_1:-76811417 Msa1215530:CDS
GAAATTGTGGGAACTGTCAA+CGG 0.521304 8_1:-76812595 Msa1215530:CDS
CTGTTCTTGATCCCCAAGGA+TGG 0.521612 8_1:-76811568 Msa1215530:CDS
GTGTTAAATGAAAGTGCAAA+TGG 0.521623 8_1:-76810413 Msa1215530:three_prime_UTR
TATTTCTAGGGCACTGAGGA+TGG 0.523674 8_1:+76812182 None:intergenic
AGAGTTAACCTTAGTAGCAG+TGG 0.524095 8_1:-76812793 Msa1215530:CDS
ATAACGTTTATTGATACCCC+TGG 0.524878 8_1:-76812565 Msa1215530:CDS
GTAACAGGGACGAAAGGAGA+TGG 0.527370 8_1:+76811999 None:intergenic
AATGTATATGCCTCTGTTGT+GGG 0.528781 8_1:-76811488 Msa1215530:CDS
AATACAGCAGTATATACATC+AGG 0.529432 8_1:-76812251 Msa1215530:CDS
CTTAAGTTGTCATTTCTGAT+GGG 0.530243 8_1:+76811110 None:intergenic
CGGTTATGAGTTTCAAAAGT+GGG 0.531512 8_1:+76812401 None:intergenic
GTAACTTCTCCTTGCGTCTA+CGG 0.535519 8_1:+76811756 None:intergenic
GTCCTTGGTAAAACAGGAGT+TGG 0.536410 8_1:-76812700 Msa1215530:CDS
TGGAATTGATGATGAAATTG+AGG 0.537206 8_1:-76811951 Msa1215530:CDS
GGCAACTTTGATTCGTGCTG+AGG 0.539713 8_1:-76812830 Msa1215530:CDS
TTTCATGTGTTGCAGTAGGT+AGG 0.541292 8_1:-76814629 Msa1215530:intron
ACAAATGCATAAGAATAAGC+AGG 0.543429 8_1:-76811465 Msa1215530:CDS
ATTTATCAATCTCAACATAG+TGG 0.546709 8_1:-76812982 Msa1215530:CDS
TAATTAACAGTATATCCGTT+AGG 0.548451 8_1:+76812304 None:intergenic
TTTGTCAGGATTCGTATGGA+TGG 0.552263 8_1:+76811881 None:intergenic
ATAATGTGAAGAGAAATAAG+AGG 0.552411 8_1:-76812522 Msa1215530:CDS
AAAGTATTACTGCCTGATAA+CGG 0.554124 8_1:+76814543 None:intergenic
GATGGGGCAGAGAAGGAACT+CGG 0.556331 8_1:+76812017 None:intergenic
TTCACATTATTGGTAGAGGA+AGG 0.558967 8_1:+76812535 None:intergenic
CGCTCTGTATCCAATCAAAG+TGG 0.559680 8_1:-76811971 Msa1215530:CDS
GGAACTCGGGCACTGTTTGT+CGG 0.561687 8_1:+76812031 None:intergenic
GGTTCTTTATCGGATGCACC+TGG 0.562373 8_1:-76812851 Msa1215530:CDS
CCAGTCAAAAGAAAACCTCT+TGG 0.562419 8_1:-76812881 Msa1215530:CDS
GGTGTTGACGTTCAATCTGT+TGG 0.564246 8_1:-76811377 Msa1215530:CDS
GAATGTATATGCCTCTGTTG+TGG 0.564521 8_1:-76811489 Msa1215530:CDS
CATTAAGATCTTCACTTGGA+CGG 0.569290 8_1:+76814508 None:intergenic
TCCAAACCTGTCCATTAGGA+AGG 0.569812 8_1:+76812143 None:intergenic
GCAAACCAACATGAGGCAGC+TGG 0.573659 8_1:-76812757 Msa1215530:CDS
CAGCACGAATCAAAGTTGCC+AGG 0.573919 8_1:+76812833 None:intergenic
CAATGAATTGGACAATAGCT+GGG 0.574530 8_1:+76814578 None:intergenic
GGTCAGGGACAAGTGGCGCA+CGG 0.574870 8_1:-76811170 Msa1215530:CDS
ATATACATTCTTCTTTACTT+CGG 0.576190 8_1:+76811502 None:intergenic
AGAAAACCTCTTGGTCGCAA+AGG 0.576656 8_1:-76812872 Msa1215530:CDS
TAGAGGAAGGCAGGAAACCA+GGG 0.579361 8_1:+76812548 None:intergenic
CCGTCTCTTTATTGAAAGAG+AGG 0.581560 8_1:+76811072 None:intergenic
TGCATCTGAAGCTTGCTGCA+AGG 0.583506 8_1:+76813008 None:intergenic
GATTGCATCCAAGAAATTGT+GGG 0.583925 8_1:-76812607 Msa1215530:CDS
AGGACCCATCGGATTGACAT+AGG 0.584731 8_1:+76811412 None:intergenic
ATGGGGCAGAGAAGGAACTC+GGG 0.585099 8_1:+76812018 None:intergenic
GCATACCAGCTGCCTCATGT+TGG 0.587195 8_1:+76812752 None:intergenic
ACGGAAGGATACTTTGGCAA+AGG 0.588504 8_1:-76812950 Msa1215530:CDS
GTTGACGTTCAATCTGTTGG+TGG 0.589125 8_1:-76811374 Msa1215530:CDS
TAGAACTGCTCTGATTACTC+TGG 0.589157 8_1:+76813031 None:intergenic
TGTTCTTGATCCCCAAGGAT+GGG 0.591666 8_1:-76811567 Msa1215530:CDS
ATGGGTCCTAGTTACTCTAT+CGG 0.592824 8_1:-76811398 Msa1215530:CDS
TGTGATTAATGCTGGCCGTA+TGG 0.596004 8_1:-76811195 Msa1215530:CDS
ATTAATGCTGGCCGTATGGA+AGG 0.596929 8_1:-76811191 Msa1215530:CDS
CTACGTGGGTGCAAAACTTG+AGG 0.597691 8_1:-76811249 Msa1215530:CDS
GCTGTGTTGCGATGAAGAGA+AGG 0.597721 8_1:-76813638 Msa1215530:CDS
AACATAGTGGAAATGGAAGA+CGG 0.597730 8_1:-76812969 Msa1215530:CDS
CCAAGGATGGGATCACGATG+TGG 0.599335 8_1:-76811555 Msa1215530:CDS
TTACTGCCTGATAACGGCGT+TGG 0.599562 8_1:+76814549 None:intergenic
AATAAAGAGACGGTGTTGAG+TGG 0.600052 8_1:-76811062 Msa1215530:CDS
GTCTGGCGCCTTAGACCACT+CGG 0.605648 8_1:+76815365 None:intergenic
GTTGCAGTAGGTAGGATGAA+AGG 0.605675 8_1:-76814621 Msa1215530:intron
TACAGAGCGATGGCGTAACA+GGG 0.607184 8_1:+76811985 None:intergenic
ACTGCTCTGATTACTCTGGT+TGG 0.608053 8_1:+76813035 None:intergenic
AGAAGAGTACCGTAGACGCA+AGG 0.608546 8_1:-76811765 Msa1215530:CDS
AAAGAACCTTTGCGACCAAG+AGG 0.609848 8_1:+76812866 None:intergenic
CCTTAAGTTTCAGAATGGTG+TGG 0.610008 8_1:-76812062 Msa1215530:CDS
GCAGCCTATGTCAATCCGAT+GGG 0.610969 8_1:-76811416 Msa1215530:CDS
TATGGAAGGTCAGGGACAAG+TGG 0.611077 8_1:-76811177 Msa1215530:CDS
TAGTGGAAATGGAAGACGGA+AGG 0.611895 8_1:-76812965 Msa1215530:CDS
TCTGGATGAATTGGAATACA+GGG 0.613064 8_1:-76811816 Msa1215530:CDS
TCGGTTATGAGTTTCAAAAG+TGG 0.613599 8_1:+76812400 None:intergenic
TCATCCTCATCTATTCCAGA+AGG 0.615247 8_1:-76812328 Msa1215530:CDS
CTGCAGGAGAAGTCCAATTG+AGG 0.616507 8_1:+76812730 None:intergenic
CCTCTCTTTCAATAAAGAGA+CGG 0.623279 8_1:-76811072 Msa1215530:CDS
GATGGCGTAACAGGGACGAA+AGG 0.623297 8_1:+76811993 None:intergenic
CAAATGAACATCTAAGATTG+GGG 0.626040 8_1:+76810567 None:intergenic
TCTATTCCAGAAGGACCTAA+CGG 0.628397 8_1:-76812319 Msa1215530:CDS
CACCATTCTGAAACTTAAGG+AGG 0.630632 8_1:+76812065 None:intergenic
GGTCATTATCAACAAGGCAG+CGG 0.634552 8_1:+76811606 None:intergenic
TGGTCATTAAGATCTTCACT+TGG 0.635068 8_1:+76814504 None:intergenic
AGGTCCTTCTGGAATAGATG+AGG 0.635072 8_1:+76812324 None:intergenic
TCAACACCGATAGAGTAACT+AGG 0.636344 8_1:+76811392 None:intergenic
CTTGTCCCTGACCTTCCATA+CGG 0.638607 8_1:+76811180 None:intergenic
ACCATTCTGAAACTTAAGGA+GGG 0.641356 8_1:+76812066 None:intergenic
ATCTAAATAGTCGCAAAATG+GGG 0.642485 8_1:-76810983 Msa1215530:CDS
AACAGGGACGAAAGGAGATG+GGG 0.643949 8_1:+76812001 None:intergenic
CAAGGATGGGATCACGATGT+GGG 0.648192 8_1:-76811554 Msa1215530:CDS
ATGCATTTGTCCCACAACAG+AGG 0.649384 8_1:+76811478 None:intergenic
GAAGAGTTTGATGTGCCAGA+CGG 0.650267 8_1:+76813060 None:intergenic
GGTAACTGAACAGGTTCTGG+AGG 0.651243 8_1:+76811680 None:intergenic
GCTGGCCGTATGGAAGGTCA+GGG 0.656209 8_1:-76811185 Msa1215530:CDS
TTTGATTGGATACAGAGCGA+TGG 0.656620 8_1:+76811975 None:intergenic
AGAGGAAGGCAGGAAACCAG+GGG 0.656772 8_1:+76812549 None:intergenic
TAGAAAGGAAATCTAGAACA+TGG 0.664040 8_1:-76810877 Msa1215530:exon
CATAACCGAGGTATTTGGTG+CGG 0.667741 8_1:-76812386 Msa1215530:CDS
AAGTACAAAACGATGTCTGG+AGG 0.667898 8_1:+76812463 None:intergenic
ATAGAGTAACTAGGACCCAT+CGG 0.669102 8_1:+76811401 None:intergenic
AGTGAAGATCTTAATGACCA+AGG 0.669591 8_1:-76814501 Msa1215530:intron
AGGTTGAAAAGCATTAGTCG+TGG 0.671619 8_1:+76812636 None:intergenic
AGAAATAGCAAACCAACATG+AGG 0.671633 8_1:-76812764 Msa1215530:CDS
AGACCTGTTCTTGATCCCCA+AGG 0.680894 8_1:-76811572 Msa1215530:CDS
ACATCGTGATCCCATCCTTG+GGG 0.684919 8_1:+76811557 None:intergenic
AACAAGTCAGGATGGCCGAG+TGG 0.691011 8_1:-76815380 None:intergenic
ATTTGGTGAAGCATTCTGCA+AGG 0.692556 8_1:-76810778 Msa1215530:three_prime_UTR
GATTGCCGCACCAAATACCT+CGG 0.694787 8_1:+76812381 None:intergenic
AAAATATTTCTAGGGCACTG+AGG 0.697500 8_1:+76812178 None:intergenic
TTCGGAAAGAAATACTACGT+GGG 0.706299 8_1:-76811263 Msa1215530:CDS
GATAATTCTGATGATCAACA+GGG 0.708450 8_1:-76811704 Msa1215530:CDS
GTAATTGGTCATTATCAACA+AGG 0.716359 8_1:+76811600 None:intergenic
TTTCGGAAAGAAATACTACG+TGG 0.732414 8_1:-76811264 Msa1215530:CDS
AAGCACAACATTGCTGACTG+TGG 0.737708 8_1:-76811302 Msa1215530:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTAATTTTATTTT+AGG + chr8_1:76810579-76810598 None:intergenic 0.0%
!!! ATTTTAATTTTATTTTAGGT+TGG + chr8_1:76810575-76810594 None:intergenic 10.0%
!! TAATAATAAAAATAGAAAAG+TGG + chr8_1:76810921-76810940 None:intergenic 10.0%
!!! ATTCTATTTTTTTGTATATT+TGG - chr8_1:76811990-76812009 Msa1215530:CDS 10.0%
!!! TTAATTTTAATTCATTTGAA+GGG + chr8_1:76812315-76812334 None:intergenic 10.0%
!!! ATTAATTTTAATTCATTTGA+AGG + chr8_1:76812316-76812335 None:intergenic 10.0%
!! TTCAAATGAATTAAAATTAA+TGG - chr8_1:76812315-76812334 Msa1215530:CDS 10.0%
!!! ATTAATTGATTTGATTGAAA+TGG - chr8_1:76811007-76811026 Msa1215530:CDS 15.0%
!!! CAAGAATTTTCATTTATAAA+AGG + chr8_1:76811046-76811065 None:intergenic 15.0%
!! TTTATAAATGAAAATTCTTG+TGG - chr8_1:76811046-76811065 Msa1215530:CDS 15.0%
!!! TGAATACAATATTTTACTAT+GGG - chr8_1:76811362-76811381 Msa1215530:CDS 15.0%
!! AAAATAGAATTAAGAAAATG+TGG + chr8_1:76811980-76811999 None:intergenic 15.0%
!! TTGGAGATTAAAACAAAAAT+AGG + chr8_1:76810556-76810575 None:intergenic 20.0%
!! TAATGAATTAGAGTAAGTTA+AGG - chr8_1:76810608-76810627 Msa1215530:three_prime_UTR 20.0%
!! ATTAATTATGAGTGTAACTA+AGG + chr8_1:76810993-76811012 None:intergenic 20.0%
!! TAATACTAGTAGTATATCTT+TGG - chr8_1:76811071-76811090 Msa1215530:CDS 20.0%
!!! AAACCTCAAATTGTTTTTAA+TGG - chr8_1:76811117-76811136 Msa1215530:CDS 20.0%
!! AAACCATTAAAAACAATTTG+AGG + chr8_1:76811123-76811142 None:intergenic 20.0%
!! TTTAAGTAATTATGCAGAAA+TGG + chr8_1:76811317-76811336 None:intergenic 20.0%
!!! GTGAATACAATATTTTACTA+TGG - chr8_1:76811361-76811380 Msa1215530:CDS 20.0%
!!! GAATACAATATTTTACTATG+GGG - chr8_1:76811363-76811382 Msa1215530:CDS 20.0%
!!! CTAGTATATTTTAGCATTTT+AGG - chr8_1:76811629-76811648 Msa1215530:CDS 20.0%
!!! TATATTTTAGCATTTTAGGT+AGG - chr8_1:76811633-76811652 Msa1215530:CDS 20.0%
!!! GTTTATAAAATGTTGGTTAT+AGG - chr8_1:76811714-76811733 Msa1215530:CDS 20.0%
!! TTTGGCTAAATAAAGTTTAA+AGG - chr8_1:76812008-76812027 Msa1215530:CDS 20.0%
!! TAAATAAAGTTTAAAGGAGA+AGG - chr8_1:76812014-76812033 Msa1215530:CDS 20.0%
!! ATCAAATATAGAGTTTATAG+TGG + chr8_1:76813110-76813129 None:intergenic 20.0%
!!! CATTTGTTTCTTTAAGTAAA+GGG + chr8_1:76813989-76814008 None:intergenic 20.0%
!!! TCATTTGTTTCTTTAAGTAA+AGG + chr8_1:76813990-76814009 None:intergenic 20.0%
!! ATATACATTCTTCTTTACTT+CGG + chr8_1:76814277-76814296 None:intergenic 20.0%
!! TTAAAATTTGTGATTAATGC+TGG - chr8_1:76814573-76814592 Msa1215530:CDS 20.0%
!! TTGTTCAATAATCAGTATTT+GGG - chr8_1:76815181-76815200 Msa1215530:intron 20.0%
!! TTAGTAGTATATGAACTTAT+CGG - chr8_1:76815312-76815331 Msa1215530:intron 20.0%
! AAAAAAGAAATGTCAGAAGT+GGG + chr8_1:76810475-76810494 None:intergenic 25.0%
! TAAAAAAGAAATGTCAGAAG+TGG + chr8_1:76810476-76810495 None:intergenic 25.0%
! TAGAGATTATCTATATGGAT+TGG + chr8_1:76810698-76810717 None:intergenic 25.0%
! TAGGATAGAGATTATCTATA+TGG + chr8_1:76810703-76810722 None:intergenic 25.0%
! AGCTTAATATGTTTCTTCAT+AGG - chr8_1:76811463-76811482 Msa1215530:CDS 25.0%
! AAACAAACATACTCTTTATG+AGG + chr8_1:76811752-76811771 None:intergenic 25.0%
!! TAAAGAGTATGTTTGTTTGA+AGG - chr8_1:76811754-76811773 Msa1215530:CDS 25.0%
! ATGAAAATGTTACATCTTCA+AGG + chr8_1:76811805-76811824 None:intergenic 25.0%
!! AGATGTAACATTTTCATGTT+TGG - chr8_1:76811808-76811827 Msa1215530:CDS 25.0%
! TAAGAAAATGTGGTAGAATA+AGG + chr8_1:76811970-76811989 None:intergenic 25.0%
!! TTGATTCAGAATTGATTCTT+AGG + chr8_1:76812580-76812599 None:intergenic 25.0%
! ATTTATCAATCTCAACATAG+TGG - chr8_1:76812794-76812813 Msa1215530:CDS 25.0%
!! CTTATTTCTCTTCACATTAT+TGG + chr8_1:76813254-76813273 None:intergenic 25.0%
! ATAATGTGAAGAGAAATAAG+AGG - chr8_1:76813254-76813273 Msa1215530:intron 25.0%
! TAATTAACAGTATATCCGTT+AGG + chr8_1:76813475-76813494 None:intergenic 25.0%
!! ATAATCTTCTTTTTGCAACT+TGG + chr8_1:76813941-76813960 None:intergenic 25.0%
! TAATCTAAATAGTCGCAAAA+TGG - chr8_1:76814791-76814810 Msa1215530:intron 25.0%
! AATCTAAATAGTCGCAAAAT+GGG - chr8_1:76814792-76814811 Msa1215530:intron 25.0%
! GTTGTTCAATAATCAGTATT+TGG - chr8_1:76815180-76815199 Msa1215530:intron 25.0%
!! ACAAATGAACATCTAAGATT+GGG + chr8_1:76815213-76815232 None:intergenic 25.0%
!! TACAAATGAACATCTAAGAT+TGG + chr8_1:76815214-76815233 None:intergenic 25.0%
! ATATTAAAGCACAGAAACTT+TGG - chr8_1:76815254-76815273 Msa1215530:intron 25.0%
! TATTAAAGCACAGAAACTTT+GGG - chr8_1:76815255-76815274 Msa1215530:intron 25.0%
!!! TTATTTTAATCTCTTCACCG+TGG - chr8_1:76810496-76810515 Msa1215530:three_prime_UTR 30.0%
!!! TATTTTAATCTCTTCACCGT+GGG - chr8_1:76810497-76810516 Msa1215530:three_prime_UTR 30.0%
!! ACAAAAATAGGCGCTATTTT+AGG + chr8_1:76810544-76810563 None:intergenic 30.0%
GGATAGATAGATAGATAAGA+CGG + chr8_1:76810673-76810692 None:intergenic 30.0%
!! GATTATCTATATGGATTGGA+GGG + chr8_1:76810694-76810713 None:intergenic 30.0%
!! AGATTATCTATATGGATTGG+AGG + chr8_1:76810695-76810714 None:intergenic 30.0%
ATGAATAGGAGAAAGAGATA+CGG + chr8_1:76810765-76810784 None:intergenic 30.0%
! TTCTCCTATTCATTGTGTTT+TGG - chr8_1:76810772-76810791 Msa1215530:three_prime_UTR 30.0%
! TCTCCTATTCATTGTGTTTT+GGG - chr8_1:76810773-76810792 Msa1215530:three_prime_UTR 30.0%
! ATCCCAAGAAGCATATTTAT+GGG + chr8_1:76810833-76810852 None:intergenic 30.0%
! AATCCCAAGAAGCATATTTA+TGG + chr8_1:76810834-76810853 None:intergenic 30.0%
TAAATATGCTTCTTGGGATT+TGG - chr8_1:76810834-76810853 Msa1215530:three_prime_UTR 30.0%
!!! GATGAAAGGTTTTAGAGATT+GGG - chr8_1:76811169-76811188 Msa1215530:CDS 30.0%
! AAAGTATTACTGCCTGATAA+CGG + chr8_1:76811236-76811255 None:intergenic 30.0%
TAGAGAACTATATATCAGCA+GGG + chr8_1:76811424-76811443 None:intergenic 30.0%
ACTTGACAACTAATCTCAAA+TGG + chr8_1:76811492-76811511 None:intergenic 30.0%
GGTTTAATGTTGTAAGCTAA+AGG - chr8_1:76811581-76811600 Msa1215530:CDS 30.0%
! CCAACATTTTATAAACAGCA+AGG + chr8_1:76811710-76811729 None:intergenic 30.0%
!! CCTTGCTGTTTATAAAATGT+TGG - chr8_1:76811707-76811726 Msa1215530:CDS 30.0%
AAATAAGTTTCTATTCCCAC+GGG + chr8_1:76811914-76811933 None:intergenic 30.0%
GAAATAAGTTTCTATTCCCA+CGG + chr8_1:76811915-76811934 None:intergenic 30.0%
TGGAAGTTAAAAGTAATCGA+TGG + chr8_1:76811947-76811966 None:intergenic 30.0%
!! AGAAAACCTCTTTACTTTTG+TGG + chr8_1:76812507-76812526 None:intergenic 30.0%
! ACATCGTTTTGTACTTTGAA+CGG - chr8_1:76813320-76813339 Msa1215530:intron 30.0%
AATACAGCAGTATATACATC+AGG - chr8_1:76813525-76813544 Msa1215530:intron 30.0%
ATCATCAATTCCACTTTGAT+TGG + chr8_1:76813818-76813837 None:intergenic 30.0%
!! TGGAATTGATGATGAAATTG+AGG - chr8_1:76813825-76813844 Msa1215530:intron 30.0%
TTACTTTCAGACAAAGAAGA+AGG - chr8_1:76813853-76813872 Msa1215530:intron 30.0%
! TTTCAAATTGGGATTTTGTC+AGG + chr8_1:76813912-76813931 None:intergenic 30.0%
! CTTGGACAACTTTTCAAATT+GGG + chr8_1:76813923-76813942 None:intergenic 30.0%
! ACTTGGACAACTTTTCAAAT+TGG + chr8_1:76813924-76813943 None:intergenic 30.0%
GTTGCAAAAAGAAGATTATC+TGG - chr8_1:76813942-76813961 Msa1215530:intron 30.0%
AGAAGATTATCTGGATGAAT+TGG - chr8_1:76813951-76813970 Msa1215530:intron 30.0%
TGATAATTCTGATGATCAAC+AGG - chr8_1:76814071-76814090 Msa1215530:intron 30.0%
GATAATTCTGATGATCAACA+GGG - chr8_1:76814072-76814091 Msa1215530:intron 30.0%
CAATCTGAATCAAAACTTAG+AGG + chr8_1:76814135-76814154 None:intergenic 30.0%
GTAATTGGTCATTATCAACA+AGG + chr8_1:76814179-76814198 None:intergenic 30.0%
ACAAATGCATAAGAATAAGC+AGG - chr8_1:76814311-76814330 Msa1215530:intron 30.0%
!! CAATTTTGTGTTGCTATGAA+CGG + chr8_1:76814445-76814464 None:intergenic 30.0%
! CTTAAGTTGTCATTTCTGAT+GGG + chr8_1:76814669-76814688 None:intergenic 30.0%
GTAATTTACAATCTGAGTTC+AGG - chr8_1:76814736-76814755 Msa1215530:intron 30.0%
ATCTAAATAGTCGCAAAATG+GGG - chr8_1:76814793-76814812 Msa1215530:intron 30.0%
! TGCAGTTTTCTCAATTTTGA+AGG - chr8_1:76814866-76814885 Msa1215530:intron 30.0%
! TAGAAAGGAAATCTAGAACA+TGG - chr8_1:76814899-76814918 Msa1215530:intron 30.0%
!!! AGACTCATCTATTTTGATCA+GGG - chr8_1:76814965-76814984 Msa1215530:intron 30.0%
ATCAGGGAAAAGATGAAATT+TGG - chr8_1:76814981-76815000 Msa1215530:intron 30.0%
! ATACTTCAGATTCCAGTTTT+TGG - chr8_1:76815109-76815128 Msa1215530:intron 30.0%
! TTTGGAAGTCTCTTTAGTTT+AGG - chr8_1:76815127-76815146 Msa1215530:intron 30.0%
ATTGAACAACAATGCACAAA+AGG + chr8_1:76815170-76815189 None:intergenic 30.0%
! CAAATGAACATCTAAGATTG+GGG + chr8_1:76815212-76815231 None:intergenic 30.0%
! GTGTTAAATGAAAGTGCAAA+TGG - chr8_1:76815363-76815382 Msa1215530:CDS 30.0%
!!! GCTATTTTAGGTTAGGGTTA+TGG + chr8_1:76810532-76810551 None:intergenic 35.0%
!!! ATAGGCGCTATTTTAGGTTA+GGG + chr8_1:76810538-76810557 None:intergenic 35.0%
!!! AATAGGCGCTATTTTAGGTT+AGG + chr8_1:76810539-76810558 None:intergenic 35.0%
ATGTTCCTTTCTCCCAAATT+AGG - chr8_1:76810803-76810822 Msa1215530:three_prime_UTR 35.0%
TGTTCCTTTCTCCCAAATTA+GGG - chr8_1:76810804-76810823 Msa1215530:three_prime_UTR 35.0%
TTTATGGGGAACCCTAATTT+GGG + chr8_1:76810818-76810837 None:intergenic 35.0%
ATTTATGGGGAACCCTAATT+TGG + chr8_1:76810819-76810838 None:intergenic 35.0%
TTCCCCATAAATATGCTTCT+TGG - chr8_1:76810827-76810846 Msa1215530:three_prime_UTR 35.0%
TCCCCATAAATATGCTTCTT+GGG - chr8_1:76810828-76810847 Msa1215530:three_prime_UTR 35.0%
! TCCCAAGAAGCATATTTATG+GGG + chr8_1:76810832-76810851 None:intergenic 35.0%
! TTCTTTTCATGTGTTGCAGT+AGG - chr8_1:76811143-76811162 Msa1215530:CDS 35.0%
!!! GGATGAAAGGTTTTAGAGAT+TGG - chr8_1:76811168-76811187 Msa1215530:CDS 35.0%
CAATGAATTGGACAATAGCT+GGG + chr8_1:76811201-76811220 None:intergenic 35.0%
TCAATGAATTGGACAATAGC+TGG + chr8_1:76811202-76811221 None:intergenic 35.0%
CATTAAGATCTTCACTTGGA+CGG + chr8_1:76811271-76811290 None:intergenic 35.0%
TGGTCATTAAGATCTTCACT+TGG + chr8_1:76811275-76811294 None:intergenic 35.0%
AGTGAAGATCTTAATGACCA+AGG - chr8_1:76811275-76811294 Msa1215530:CDS 35.0%
ATGCAGAAATGGTAAAACCA+GGG + chr8_1:76811306-76811325 None:intergenic 35.0%
TATGCAGAAATGGTAAAACC+AGG + chr8_1:76811307-76811326 None:intergenic 35.0%
CTAGAGAACTATATATCAGC+AGG + chr8_1:76811425-76811444 None:intergenic 35.0%
TGACAACTAATCTCAAATGG+TGG + chr8_1:76811489-76811508 None:intergenic 35.0%
! TGTCAAGTATTGCAATGCTT+AGG - chr8_1:76811504-76811523 Msa1215530:CDS 35.0%
GCAAGGCTCTACTTATAATT+GGG + chr8_1:76811693-76811712 None:intergenic 35.0%
AGCAAGGCTCTACTTATAAT+TGG + chr8_1:76811694-76811713 None:intergenic 35.0%
GAAAATGTGGTAGAATAAGG+TGG + chr8_1:76811967-76811986 None:intergenic 35.0%
AGAGAGAAGAAATGAACATG+TGG - chr8_1:76812059-76812078 Msa1215530:CDS 35.0%
TGAATGAATGGATGAAGAGA+AGG - chr8_1:76812226-76812245 Msa1215530:CDS 35.0%
GAATGAATGGATGAAGAGAA+GGG - chr8_1:76812227-76812246 Msa1215530:CDS 35.0%
! TGTGTTGTTGAGAAAGGTTT+AGG - chr8_1:76812259-76812278 Msa1215530:CDS 35.0%
! GTGTTGTTGAGAAAGGTTTA+GGG - chr8_1:76812260-76812279 Msa1215530:CDS 35.0%
AAAATGAAAAGCGATTGGTG+CGG + chr8_1:76812351-76812370 None:intergenic 35.0%
GTGCAAAAATGAAAAGCGAT+TGG + chr8_1:76812356-76812375 None:intergenic 35.0%
AGGAATAGGATCATATTCCT+AGG + chr8_1:76812473-76812492 None:intergenic 35.0%
TGGCATTTGTTCAAAGGAAT+AGG + chr8_1:76812487-76812506 None:intergenic 35.0%
! CTTTTGTGGCATTTGTTCAA+AGG + chr8_1:76812493-76812512 None:intergenic 35.0%
CAAATGCCACAAAAGTAAAG+AGG - chr8_1:76812498-76812517 Msa1215530:CDS 35.0%
! TCAGAATTGATTCTTAGGCA+TGG + chr8_1:76812575-76812594 None:intergenic 35.0%
! CAATCTCAACATAGTGGAAA+TGG - chr8_1:76812800-76812819 Msa1215530:CDS 35.0%
! AACATAGTGGAAATGGAAGA+CGG - chr8_1:76812807-76812826 Msa1215530:CDS 35.0%
GAAGGCGGAAAAATTTAACT+TGG + chr8_1:76812862-76812881 None:intergenic 35.0%
!! ATGTTGGTTTGCTATTTCTC+GGG + chr8_1:76813011-76813030 None:intergenic 35.0%
!! CATGTTGGTTTGCTATTTCT+CGG + chr8_1:76813012-76813031 None:intergenic 35.0%
AGAAATAGCAAACCAACATG+AGG - chr8_1:76813012-76813031 Msa1215530:CDS 35.0%
ATACTTGTCCTTGGTAAAAC+AGG - chr8_1:76813070-76813089 Msa1215530:CDS 35.0%
CACAATTTCTTGGATGCAAT+CGG + chr8_1:76813170-76813189 None:intergenic 35.0%
GATTGCATCCAAGAAATTGT+GGG - chr8_1:76813169-76813188 Msa1215530:intron 35.0%
ATAACGTTTATTGATACCCC+TGG - chr8_1:76813211-76813230 Msa1215530:intron 35.0%
TTCACATTATTGGTAGAGGA+AGG + chr8_1:76813244-76813263 None:intergenic 35.0%
TCTCTTCACATTATTGGTAG+AGG + chr8_1:76813248-76813267 None:intergenic 35.0%
TCAAAGTACAAAACGATGTC+TGG + chr8_1:76813319-76813338 None:intergenic 35.0%
CGGTTATGAGTTTCAAAAGT+GGG + chr8_1:76813378-76813397 None:intergenic 35.0%
TCGGTTATGAGTTTCAAAAG+TGG + chr8_1:76813379-76813398 None:intergenic 35.0%
!!! ACTTTTGAAACTCATAACCG+AGG - chr8_1:76813378-76813397 Msa1215530:intron 35.0%
! AAACTCATAACCGAGGTATT+TGG - chr8_1:76813385-76813404 Msa1215530:intron 35.0%
ATCAGGCAATGTTAGATTCA+AGG - chr8_1:76813542-76813561 Msa1215530:intron 35.0%
!! AAAATATTTCTAGGGCACTG+AGG + chr8_1:76813601-76813620 None:intergenic 35.0%
! TCAGTGCCCTAGAAATATTT+TGG - chr8_1:76813600-76813619 Msa1215530:intron 35.0%
! CAGTGCCCTAGAAATATTTT+GGG - chr8_1:76813601-76813620 Msa1215530:intron 35.0%
! AGTGCCCTAGAAATATTTTG+GGG - chr8_1:76813602-76813621 Msa1215530:intron 35.0%
! TCTCCCCCAAAATATTTCTA+GGG + chr8_1:76813609-76813628 None:intergenic 35.0%
TTCTCCCCCAAAATATTTCT+AGG + chr8_1:76813610-76813629 None:intergenic 35.0%
TGCATTTGTACCAAAGTTCT+AGG - chr8_1:76813676-76813695 Msa1215530:CDS 35.0%
ATTTACGTCACCTAGAACTT+TGG + chr8_1:76813689-76813708 None:intergenic 35.0%
!! ACCATTCTGAAACTTAAGGA+GGG + chr8_1:76813713-76813732 None:intergenic 35.0%
TTTCAGAATGGTGTGGAATT+AGG - chr8_1:76813721-76813740 Msa1215530:intron 35.0%
ATCTGGATGAATTGGAATAC+AGG - chr8_1:76813959-76813978 Msa1215530:intron 35.0%
TCTGGATGAATTGGAATACA+GGG - chr8_1:76813960-76813979 Msa1215530:intron 35.0%
!! GGGTTTTGATGGTATAAACT+TGG - chr8_1:76814242-76814261 Msa1215530:intron 35.0%
AATGTATATGCCTCTGTTGT+GGG - chr8_1:76814288-76814307 Msa1215530:intron 35.0%
!! ATCTGTTGGTGGTAAAGATA+TGG - chr8_1:76814413-76814432 Msa1215530:intron 35.0%
GGTGTTTCTTTGACATCTTT+CGG - chr8_1:76814495-76814514 Msa1215530:intron 35.0%
TTTCGGAAAGAAATACTACG+TGG - chr8_1:76814512-76814531 Msa1215530:CDS 35.0%
TTCGGAAAGAAATACTACGT+GGG - chr8_1:76814513-76814532 Msa1215530:CDS 35.0%
CTTGAGGATACTTTGCTAAT+CGG - chr8_1:76814543-76814562 Msa1215530:CDS 35.0%
!!! AGTTTTGAAGCTTGTTTACG+AGG - chr8_1:76814633-76814652 Msa1215530:intron 35.0%
!!! GTTTTGAAGCTTGTTTACGA+GGG - chr8_1:76814634-76814653 Msa1215530:intron 35.0%
!!! TTTTGAAGCTTGTTTACGAG+GGG - chr8_1:76814635-76814654 Msa1215530:intron 35.0%
! GCTTAAGTTGTCATTTCTGA+TGG + chr8_1:76814670-76814689 None:intergenic 35.0%
CCTCTCTTTCAATAAAGAGA+CGG - chr8_1:76814704-76814723 Msa1215530:intron 35.0%
TGAGCATTTACAAATTGCCT+TGG - chr8_1:76814842-76814861 Msa1215530:intron 35.0%
AATTGAGAAAACTGCAACCA+AGG + chr8_1:76814862-76814881 None:intergenic 35.0%
GAAGGTTCTGTTACATAGAA+AGG - chr8_1:76814884-76814903 Msa1215530:intron 35.0%
GAAAGTCCTCGAAAGATATT+AGG - chr8_1:76814926-76814945 Msa1215530:intron 35.0%
ACAGAACCTAATATCTTTCG+AGG + chr8_1:76814935-76814954 None:intergenic 35.0%
!!! GAGACTCATCTATTTTGATC+AGG - chr8_1:76814964-76814983 Msa1215530:intron 35.0%
!! ATTTCGTTTTCCCTCTGAAA+CGG + chr8_1:76815046-76815065 None:intergenic 35.0%
CTAAAGAGACTTCCAAAAAC+TGG + chr8_1:76815124-76815143 None:intergenic 35.0%
!! TATGAACTTATCGGTTCAAC+AGG - chr8_1:76815321-76815340 Msa1215530:intron 35.0%
! AAGTTCTGGTCTTCGAAAGA+GGG - chr8_1:76810436-76810455 Msa1215530:three_prime_UTR 40.0%
GGAAGAAAACGAAAATGCGT+AGG + chr8_1:76810722-76810741 None:intergenic 40.0%
AAAGAGATACGGAGAGAGAT+AGG + chr8_1:76810754-76810773 None:intergenic 40.0%
TGGCCCAAAACACAATGAAT+AGG + chr8_1:76810779-76810798 None:intergenic 40.0%
TGGGAGAAAGGAACATGTAA+TGG + chr8_1:76810799-76810818 None:intergenic 40.0%
! GGCGCAGACATTGATAATTT+GGG + chr8_1:76810873-76810892 None:intergenic 40.0%
! AGGCGCAGACATTGATAATT+TGG + chr8_1:76810874-76810893 None:intergenic 40.0%
GCAAGTAGTTCACCTAACAT+AGG + chr8_1:76810894-76810913 None:intergenic 40.0%
TTTCATGTGTTGCAGTAGGT+AGG - chr8_1:76811147-76811166 Msa1215530:CDS 40.0%
!! CAATGCTTAGGCTTTGTTCT+TGG - chr8_1:76811516-76811535 Msa1215530:CDS 40.0%
!! CTTAGGCTTTGTTCTTGGAA+GGG - chr8_1:76811521-76811540 Msa1215530:CDS 40.0%
CTCTACTTATAATTGGGAGG+GGG + chr8_1:76811687-76811706 None:intergenic 40.0%
GCTCTACTTATAATTGGGAG+GGG + chr8_1:76811688-76811707 None:intergenic 40.0%
GGCTCTACTTATAATTGGGA+GGG + chr8_1:76811689-76811708 None:intergenic 40.0%
AGGCTCTACTTATAATTGGG+AGG + chr8_1:76811690-76811709 None:intergenic 40.0%
! TGAAGGCATGCAATAATTCC+CGG - chr8_1:76811771-76811790 Msa1215530:CDS 40.0%
ATCTTCAAGGTCAGTATTCC+GGG + chr8_1:76811792-76811811 None:intergenic 40.0%
CATCTTCAAGGTCAGTATTC+CGG + chr8_1:76811793-76811812 None:intergenic 40.0%
CGGGAAGTTAGGGAAAATAT+AGG + chr8_1:76811895-76811914 None:intergenic 40.0%
! ATATTTTCCCTAACTTCCCG+TGG - chr8_1:76811895-76811914 Msa1215530:CDS 40.0%
! TATTTTCCCTAACTTCCCGT+GGG - chr8_1:76811896-76811915 Msa1215530:CDS 40.0%
TTGAGGCTGCATTGAATGAA+TGG - chr8_1:76812214-76812233 Msa1215530:CDS 40.0%
TGCTTCGCTGTTATCAATAG+CGG + chr8_1:76812448-76812467 None:intergenic 40.0%
GAAACTATCAACGCTTTAGC+TGG + chr8_1:76812553-76812572 None:intergenic 40.0%
GAGTTCTGTCTAAATTGTGC+AGG + chr8_1:76812644-76812663 None:intergenic 40.0%
TAGAACTGCTCTGATTACTC+TGG + chr8_1:76812748-76812767 None:intergenic 40.0%
! CCAAGAGGTTTTCTTTTGAC+TGG + chr8_1:76812898-76812917 None:intergenic 40.0%
CCAGTCAAAAGAAAACCTCT+TGG - chr8_1:76812895-76812914 Msa1215530:CDS 40.0%
TGGTCGCAAAGGTTCTTTAT+CGG - chr8_1:76812915-76812934 Msa1215530:CDS 40.0%
! TTTGATTCGTGCTGAGGAAA+CGG - chr8_1:76812952-76812971 Msa1215530:CDS 40.0%
AGAGTTAACCTTAGTAGCAG+TGG - chr8_1:76812983-76813002 Msa1215530:CDS 40.0%
! TTCCAACTCCTGTTTTACCA+AGG + chr8_1:76813081-76813100 None:intergenic 40.0%
!! AGGTTGAAAAGCATTAGTCG+TGG + chr8_1:76813143-76813162 None:intergenic 40.0%
CGATTGCATCCAAGAAATTG+TGG - chr8_1:76813168-76813187 Msa1215530:intron 40.0%
TGACAGTTCCCACAATTTCT+TGG + chr8_1:76813180-76813199 None:intergenic 40.0%
GAAATTGTGGGAACTGTCAA+CGG - chr8_1:76813181-76813200 Msa1215530:intron 40.0%
AAATTGTGGGAACTGTCAAC+GGG - chr8_1:76813182-76813201 Msa1215530:intron 40.0%
AAGTACAAAACGATGTCTGG+AGG + chr8_1:76813316-76813335 None:intergenic 40.0%
TCATCCTCATCTATTCCAGA+AGG - chr8_1:76813448-76813467 Msa1215530:intron 40.0%
TCTATTCCAGAAGGACCTAA+CGG - chr8_1:76813457-76813476 Msa1215530:intron 40.0%
! GGTTCTCAACAAAAAGTGCA+GGG + chr8_1:76813576-76813595 None:intergenic 40.0%
! TGGTTCTCAACAAAAAGTGC+AGG + chr8_1:76813577-76813596 None:intergenic 40.0%
!! GTGCCCTAGAAATATTTTGG+GGG - chr8_1:76813603-76813622 Msa1215530:intron 40.0%
! GAAAATCCTTCCTAATGGAC+AGG - chr8_1:76813627-76813646 Msa1215530:CDS 40.0%
TCCCTCCTTAAGTTTCAGAA+TGG - chr8_1:76813709-76813728 Msa1215530:intron 40.0%
!! CACCATTCTGAAACTTAAGG+AGG + chr8_1:76813714-76813733 None:intergenic 40.0%
!! CCACACCATTCTGAAACTTA+AGG + chr8_1:76813717-76813736 None:intergenic 40.0%
CCTTAAGTTTCAGAATGGTG+TGG - chr8_1:76813714-76813733 Msa1215530:intron 40.0%
TTTGATTGGATACAGAGCGA+TGG + chr8_1:76813804-76813823 None:intergenic 40.0%
TTTGTCAGGATTCGTATGGA+TGG + chr8_1:76813898-76813917 None:intergenic 40.0%
! GGATTTTGTCAGGATTCGTA+TGG + chr8_1:76813902-76813921 None:intergenic 40.0%
ACCTGTTCAGTTACCAGATA+TGG - chr8_1:76814104-76814123 Msa1215530:intron 40.0%
GAACAGGTCTCACAAGTAAT+TGG + chr8_1:76814194-76814213 None:intergenic 40.0%
GAATGTATATGCCTCTGTTG+TGG - chr8_1:76814287-76814306 Msa1215530:intron 40.0%
ATAGAGTAACTAGGACCCAT+CGG + chr8_1:76814378-76814397 None:intergenic 40.0%
ATGGGTCCTAGTTACTCTAT+CGG - chr8_1:76814378-76814397 Msa1215530:intron 40.0%
TCAACACCGATAGAGTAACT+AGG + chr8_1:76814387-76814406 None:intergenic 40.0%
CCGTCTCTTTATTGAAAGAG+AGG + chr8_1:76814707-76814726 None:intergenic 40.0%
! AATAAAGAGACGGTGTTGAG+TGG - chr8_1:76814714-76814733 Msa1215530:intron 40.0%
! TAGCACTAACAGTTGCTTTC+AGG + chr8_1:76814773-76814792 None:intergenic 40.0%
! ATTTGGTGAAGCATTCTGCA+AGG - chr8_1:76814998-76815017 Msa1215530:intron 40.0%
!! TTTCCCTCTGAAACGGAAAA+TGG + chr8_1:76815039-76815058 None:intergenic 40.0%
! GAAGTCTCTTTAGTTTAGGC+TGG - chr8_1:76815131-76815150 Msa1215530:intron 40.0%
! CAAGTTCTGGTCTTCGAAAG+AGG - chr8_1:76810435-76810454 Msa1215530:three_prime_UTR 45.0%
TTTAATCTCTTCACCGTGGG+TGG - chr8_1:76810500-76810519 Msa1215530:three_prime_UTR 45.0%
TTAATCTCTTCACCGTGGGT+GGG - chr8_1:76810501-76810520 Msa1215530:three_prime_UTR 45.0%
TATCGTGTTCTCTCCTTCGT+TGG - chr8_1:76810640-76810659 Msa1215530:three_prime_UTR 45.0%
GAGAGAGATAGGATTCGAGA+TGG + chr8_1:76810743-76810762 None:intergenic 45.0%
GGAACCCTAATTTGGGAGAA+AGG + chr8_1:76810811-76810830 None:intergenic 45.0%
TCAATGTCTGCGCCTATGTT+AGG - chr8_1:76810879-76810898 Msa1215530:exon 45.0%
CAGCGAACGAAACGAATTAG+AGG + chr8_1:76810959-76810978 None:intergenic 45.0%
GTTGCAGTAGGTAGGATGAA+AGG - chr8_1:76811155-76811174 Msa1215530:CDS 45.0%
CGTTGGCGAGATCAATGAAT+TGG + chr8_1:76811213-76811232 None:intergenic 45.0%
TAATGACCAAGGTACAACCC+TGG - chr8_1:76811286-76811305 Msa1215530:CDS 45.0%
GTAAAACCAGGGTTGTACCT+TGG + chr8_1:76811295-76811314 None:intergenic 45.0%
!! GCTTAGGCTTTGTTCTTGGA+AGG - chr8_1:76811520-76811539 Msa1215530:CDS 45.0%
GGGGGTGAAAGATTGTAACA+TGG + chr8_1:76811669-76811688 None:intergenic 45.0%
TCTATTCCCACGGGAAGTTA+GGG + chr8_1:76811905-76811924 None:intergenic 45.0%
TTCTATTCCCACGGGAAGTT+AGG + chr8_1:76811906-76811925 None:intergenic 45.0%
CTGTGTTGTGATGCAGAGAA+GGG - chr8_1:76812082-76812101 Msa1215530:CDS 45.0%
GTTGATGCAATCGCTCAATC+AGG - chr8_1:76812179-76812198 Msa1215530:CDS 45.0%
ATGCAATCGCTCAATCAGGA+AGG - chr8_1:76812183-76812202 Msa1215530:CDS 45.0%
TCAGGAAGGAGTTAGAGTTG+AGG - chr8_1:76812197-76812216 Msa1215530:CDS 45.0%
! TGAGGCTGTGTTGTTGAGAA+AGG - chr8_1:76812253-76812272 Msa1215530:CDS 45.0%
! GATAACAGCGAAGCATTCCT+AGG - chr8_1:76812453-76812472 Msa1215530:CDS 45.0%
TTTGATGTGCCAGACGGAAT+CGG + chr8_1:76812713-76812732 None:intergenic 45.0%
GAAGAGTTTGATGTGCCAGA+CGG + chr8_1:76812719-76812738 None:intergenic 45.0%
ACTGCTCTGATTACTCTGGT+TGG + chr8_1:76812744-76812763 None:intergenic 45.0%
TAGTGGAAATGGAAGACGGA+AGG - chr8_1:76812811-76812830 Msa1215530:CDS 45.0%
TGGAAGACGGAAGGATACTT+TGG - chr8_1:76812820-76812839 Msa1215530:CDS 45.0%
ACGGAAGGATACTTTGGCAA+AGG - chr8_1:76812826-76812845 Msa1215530:CDS 45.0%
GGATACTTTGGCAAAGGTTG+AGG - chr8_1:76812832-76812851 Msa1215530:CDS 45.0%
! AATTTTTCCGCCTTCTCCAG+CGG - chr8_1:76812867-76812886 Msa1215530:CDS 45.0%
AGAAAACCTCTTGGTCGCAA+AGG - chr8_1:76812904-76812923 Msa1215530:CDS 45.0%
AAAGAACCTTTGCGACCAAG+AGG + chr8_1:76812913-76812932 None:intergenic 45.0%
TCCTGCAGAATACTTGTCCT+TGG - chr8_1:76813061-76813080 Msa1215530:CDS 45.0%
ACCAAGGACAAGTATTCTGC+AGG + chr8_1:76813065-76813084 None:intergenic 45.0%
GTCCTTGGTAAAACAGGAGT+TGG - chr8_1:76813076-76813095 Msa1215530:CDS 45.0%
CATTATTGGTAGAGGAAGGC+AGG + chr8_1:76813240-76813259 None:intergenic 45.0%
CGGCTTGATCTGATCAATTC+TGG - chr8_1:76813340-76813359 Msa1215530:intron 45.0%
! CATAACCGAGGTATTTGGTG+CGG - chr8_1:76813390-76813409 Msa1215530:intron 45.0%
!! AGGTCCTTCTGGAATAGATG+AGG + chr8_1:76813455-76813474 None:intergenic 45.0%
GTATATCCGTTAGGTCCTTC+TGG + chr8_1:76813466-76813485 None:intergenic 45.0%
!! TATTTCTAGGGCACTGAGGA+TGG + chr8_1:76813597-76813616 None:intergenic 45.0%
GGGGAGAAAATCCTTCCTAA+TGG - chr8_1:76813622-76813641 Msa1215530:intron 45.0%
! TCCTTCCTAATGGACAGGTT+TGG - chr8_1:76813632-76813651 Msa1215530:CDS 45.0%
TCCAAACCTGTCCATTAGGA+AGG + chr8_1:76813636-76813655 None:intergenic 45.0%
GATCTCCAAACCTGTCCATT+AGG + chr8_1:76813640-76813659 None:intergenic 45.0%
TAACAGGGACGAAAGGAGAT+GGG + chr8_1:76813779-76813798 None:intergenic 45.0%
CGCTCTGTATCCAATCAAAG+TGG - chr8_1:76813805-76813824 Msa1215530:intron 45.0%
GTAACTTCTCCTTGCGTCTA+CGG + chr8_1:76814023-76814042 None:intergenic 45.0%
TCTGGTAACTGAACAGGTTC+TGG + chr8_1:76814102-76814121 None:intergenic 45.0%
GCCATATCTGGTAACTGAAC+AGG + chr8_1:76814108-76814127 None:intergenic 45.0%
CTTAGAGGAACAGCCATATC+TGG + chr8_1:76814120-76814139 None:intergenic 45.0%
GGTCATTATCAACAAGGCAG+CGG + chr8_1:76814173-76814192 None:intergenic 45.0%
TGTTCTTGATCCCCAAGGAT+GGG - chr8_1:76814209-76814228 Msa1215530:intron 45.0%
!! GATCACGATGTGGGTTTTGA+TGG - chr8_1:76814231-76814250 Msa1215530:intron 45.0%
ATGCATTTGTCCCACAACAG+AGG + chr8_1:76814301-76814320 None:intergenic 45.0%
!! GGTGTTGACGTTCAATCTGT+TGG - chr8_1:76814399-76814418 Msa1215530:intron 45.0%
GTTGACGTTCAATCTGTTGG+TGG - chr8_1:76814402-76814421 Msa1215530:intron 45.0%
! AAGCACAACATTGCTGACTG+TGG - chr8_1:76814474-76814493 Msa1215530:intron 45.0%
TGTGATTAATGCTGGCCGTA+TGG - chr8_1:76814581-76814600 Msa1215530:CDS 45.0%
ATTAATGCTGGCCGTATGGA+AGG - chr8_1:76814585-76814604 Msa1215530:CDS 45.0%
AAGAGAGGACTGTCATTGTC+AGG + chr8_1:76814692-76814711 None:intergenic 45.0%
TCTGCAAGGATGCAGAGATA+TGG - chr8_1:76815012-76815031 Msa1215530:intron 45.0%
! TGGACCATTTTCCGTTTCAG+AGG - chr8_1:76815032-76815051 Msa1215530:intron 45.0%
! GGACCATTTTCCGTTTCAGA+GGG - chr8_1:76815033-76815052 Msa1215530:intron 45.0%
!!! TTTAAATTATTAATTTTAGT+TGG - chr8_1:76811560-76811579 Msa1215530:CDS 5.0%
CGAAGACCAGAACTTGAGTC+TGG + chr8_1:76810431-76810450 None:intergenic 50.0%
GTTATGGTATGTCCCACCCA+CGG + chr8_1:76810516-76810535 None:intergenic 50.0%
AGACGGAAAGAGACCAACGA+AGG + chr8_1:76810656-76810675 None:intergenic 50.0%
!! TTACTGCCTGATAACGGCGT+TGG + chr8_1:76811230-76811249 None:intergenic 50.0%
GCTGTGTTGTGATGCAGAGA+AGG - chr8_1:76812081-76812100 Msa1215530:CDS 50.0%
CTCTTCATCGCAACACAGCT+GGG + chr8_1:76812137-76812156 None:intergenic 50.0%
TCTCTTCATCGCAACACAGC+TGG + chr8_1:76812138-76812157 None:intergenic 50.0%
GCTGTGTTGCGATGAAGAGA+AGG - chr8_1:76812138-76812157 Msa1215530:CDS 50.0%
GGATGAAGAGAAGGGAGATG+AGG - chr8_1:76812235-76812254 Msa1215530:CDS 50.0%
! ATTTTTGCACCGCTCCAACG+TGG - chr8_1:76812366-76812385 Msa1215530:CDS 50.0%
TTATCAATAGCGGCTGGTGG+TGG + chr8_1:76812438-76812457 None:intergenic 50.0%
CTGTTATCAATAGCGGCTGG+TGG + chr8_1:76812441-76812460 None:intergenic 50.0%
TCGCTGTTATCAATAGCGGC+TGG + chr8_1:76812444-76812463 None:intergenic 50.0%
!! TGCATCTGAAGCTTGCTGCA+AGG + chr8_1:76812771-76812790 None:intergenic 50.0%
GGTTCTTTATCGGATGCACC+TGG - chr8_1:76812925-76812944 Msa1215530:CDS 50.0%
CAGCACGAATCAAAGTTGCC+AGG + chr8_1:76812946-76812965 None:intergenic 50.0%
! GGCAACTTTGATTCGTGCTG+AGG - chr8_1:76812946-76812965 Msa1215530:CDS 50.0%
CTGCAGGAGAAGTCCAATTG+AGG + chr8_1:76813049-76813068 None:intergenic 50.0%
TCTTGGATGCAATCGGTAGC+AGG + chr8_1:76813163-76813182 None:intergenic 50.0%
TAGAGGAAGGCAGGAAACCA+GGG + chr8_1:76813231-76813250 None:intergenic 50.0%
GATTGCCGCACCAAATACCT+CGG + chr8_1:76813398-76813417 None:intergenic 50.0%
!! AGGTATTTGGTGCGGCAATC+TGG - chr8_1:76813398-76813417 Msa1215530:intron 50.0%
AACAGGGACGAAAGGAGATG+GGG + chr8_1:76813778-76813797 None:intergenic 50.0%
GTAACAGGGACGAAAGGAGA+TGG + chr8_1:76813780-76813799 None:intergenic 50.0%
TACAGAGCGATGGCGTAACA+GGG + chr8_1:76813794-76813813 None:intergenic 50.0%
ATACAGAGCGATGGCGTAAC+AGG + chr8_1:76813795-76813814 None:intergenic 50.0%
!! AGAAGAGTACCGTAGACGCA+AGG - chr8_1:76814011-76814030 Msa1215530:intron 50.0%
! GGTAACTGAACAGGTTCTGG+AGG + chr8_1:76814099-76814118 None:intergenic 50.0%
AGACCTGTTCTTGATCCCCA+AGG - chr8_1:76814204-76814223 Msa1215530:intron 50.0%
CATCCTTGGGGATCAAGAAC+AGG + chr8_1:76814210-76814229 None:intergenic 50.0%
CTGTTCTTGATCCCCAAGGA+TGG - chr8_1:76814208-76814227 Msa1215530:intron 50.0%
ACATCGTGATCCCATCCTTG+GGG + chr8_1:76814222-76814241 None:intergenic 50.0%
CACATCGTGATCCCATCCTT+GGG + chr8_1:76814223-76814242 None:intergenic 50.0%
CAAGGATGGGATCACGATGT+GGG - chr8_1:76814222-76814241 Msa1215530:intron 50.0%
TGCAGCCTATGTCAATCCGA+TGG - chr8_1:76814359-76814378 Msa1215530:intron 50.0%
GCAGCCTATGTCAATCCGAT+GGG - chr8_1:76814360-76814379 Msa1215530:intron 50.0%
AGGACCCATCGGATTGACAT+AGG + chr8_1:76814367-76814386 None:intergenic 50.0%
CTACGTGGGTGCAAAACTTG+AGG - chr8_1:76814527-76814546 Msa1215530:CDS 50.0%
CTTGTCCCTGACCTTCCATA+CGG + chr8_1:76814599-76814618 None:intergenic 50.0%
TATGGAAGGTCAGGGACAAG+TGG - chr8_1:76814599-76814618 Msa1215530:CDS 50.0%
! AAGGCGCCAGACTCAAGTTC+TGG - chr8_1:76810422-76810441 Msa1215530:three_prime_UTR 55.0%
! TGGTCTTCGAAAGAGGGCGT+GGG - chr8_1:76810442-76810461 Msa1215530:three_prime_UTR 55.0%
ATCTCGCCAACGCCGTTATC+AGG - chr8_1:76811221-76811240 Msa1215530:CDS 55.0%
!! GTAGCATTGCCGATTCCGTC+TGG - chr8_1:76812701-76812720 Msa1215530:CDS 55.0%
GCAAACCAACATGAGGCAGC+TGG - chr8_1:76813019-76813038 Msa1215530:CDS 55.0%
GCATACCAGCTGCCTCATGT+TGG + chr8_1:76813027-76813046 None:intergenic 55.0%
GGCAGCTGGTATGCCTCAAT+TGG - chr8_1:76813033-76813052 Msa1215530:CDS 55.0%
AGAGGAAGGCAGGAAACCAG+GGG + chr8_1:76813230-76813249 None:intergenic 55.0%
GTAGAGGAAGGCAGGAAACC+AGG + chr8_1:76813232-76813251 None:intergenic 55.0%
! GGAACTCGGGCACTGTTTGT+CGG + chr8_1:76813748-76813767 None:intergenic 55.0%
ATGGGGCAGAGAAGGAACTC+GGG + chr8_1:76813761-76813780 None:intergenic 55.0%
GATGGGGCAGAGAAGGAACT+CGG + chr8_1:76813762-76813781 None:intergenic 55.0%
GAAAGGAGATGGGGCAGAGA+AGG + chr8_1:76813769-76813788 None:intergenic 55.0%
GATGGCGTAACAGGGACGAA+AGG + chr8_1:76813786-76813805 None:intergenic 55.0%
CCACATCGTGATCCCATCCT+TGG + chr8_1:76814224-76814243 None:intergenic 55.0%
CCAAGGATGGGATCACGATG+TGG - chr8_1:76814221-76814240 Msa1215530:intron 55.0%
GTCTGGCGCCTTAGACCACT+CGG + chr8_1:76810414-76810433 None:intergenic 60.0%
! CTGGTCTTCGAAAGAGGGCG+TGG - chr8_1:76810441-76810460 Msa1215530:three_prime_UTR 60.0%
!! CTTTTGACTGGCCAAGCCGC+TGG + chr8_1:76812886-76812905 None:intergenic 60.0%
CTCGGGCTCCACTGCTACTA+AGG + chr8_1:76812994-76813013 None:intergenic 60.0%
TGCTGGCCGTATGGAAGGTC+AGG - chr8_1:76814590-76814609 Msa1215530:CDS 60.0%
GCTGGCCGTATGGAAGGTCA+GGG - chr8_1:76814591-76814610 Msa1215530:CDS 60.0%
TTGCACCGCTCCAACGTGGC+TGG - chr8_1:76812370-76812389 Msa1215530:CDS 65.0%
TGCACCGCTCCAACGTGGCT+GGG - chr8_1:76812371-76812390 Msa1215530:CDS 65.0%
CACTCCCAGCCACGTTGGAG+CGG + chr8_1:76812378-76812397 None:intergenic 65.0%
TCCAACGTGGCTGGGAGTGG+TGG - chr8_1:76812379-76812398 Msa1215530:CDS 65.0%
TGGTGGCTGCTACAGCGGTG+CGG + chr8_1:76812421-76812440 None:intergenic 65.0%
!! GCTGGTGGTGGCTGCTACAG+CGG + chr8_1:76812426-76812445 None:intergenic 65.0%
TTCCGCCTTCTCCAGCGGCT+TGG - chr8_1:76812872-76812891 Msa1215530:CDS 65.0%
ACTGGCCAAGCCGCTGGAGA+AGG + chr8_1:76812880-76812899 None:intergenic 65.0%
GGTCAGGGACAAGTGGCGCA+CGG - chr8_1:76814606-76814625 Msa1215530:CDS 65.0%
CGCTCCAACGTGGCTGGGAG+TGG - chr8_1:76812376-76812395 Msa1215530:CDS 70.0%
GCCACCACTCCCAGCCACGT+TGG + chr8_1:76812383-76812402 None:intergenic 70.0%
GGCCAAGCCGCTGGAGAAGG+CGG + chr8_1:76812877-76812896 None:intergenic 70.0%
CAGGGACAAGTGGCGCACGG+TGG - chr8_1:76814609-76814628 Msa1215530:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 76810407 76815391 76810407 ID=Msa1215530;Name=Msa1215530
chr8_1 mRNA 76810407 76815391 76810407 ID=Msa1215530-mRNA-1;Parent=Msa1215530;Name=Msa1215530-mRNA-1;_AED=0.12;_eAED=0.14;_QI=0|0|0.5|0.75|1|1|4|477|825
chr8_1 exon 76810407 76813111 76810407 ID=Msa1215530-mRNA-1:exon:26492;Parent=Msa1215530-mRNA-1
chr8_1 exon 76813623 76813700 76813623 ID=Msa1215530-mRNA-1:exon:26491;Parent=Msa1215530-mRNA-1
chr8_1 exon 76814502 76814636 76814502 ID=Msa1215530-mRNA-1:exon:26490;Parent=Msa1215530-mRNA-1
chr8_1 exon 76815355 76815391 76815355 ID=Msa1215530-mRNA-1:exon:26489;Parent=Msa1215530-mRNA-1
chr8_1 CDS 76815355 76815391 76815355 ID=Msa1215530-mRNA-1:cds;Parent=Msa1215530-mRNA-1
chr8_1 CDS 76814502 76814636 76814502 ID=Msa1215530-mRNA-1:cds;Parent=Msa1215530-mRNA-1
chr8_1 CDS 76813623 76813700 76813623 ID=Msa1215530-mRNA-1:cds;Parent=Msa1215530-mRNA-1
chr8_1 CDS 76810884 76813111 76810884 ID=Msa1215530-mRNA-1:cds;Parent=Msa1215530-mRNA-1
chr8_1 three_prime_UTR 76810407 76810883 76810407 ID=Msa1215530-mRNA-1:three_prime_utr;Parent=Msa1215530-mRNA-1
Gene Sequence

>Msa1215530

ATGGCCGAGTGGTCTAAGGCGCCAGACTCAAGTTCTGTAGGTAGGATGAAAGGTTTTAGAGATTGGGTTTTCTCCCAGCTATTGTCCAATTCATTGATCTCGCCAACGCCGTTATCAGGCAGTAATACTTTATATCTTGAAGACCGTCCAAGTGAAGATCTTAATGACCAAGAGAAGGGAAGAGATGAAGTTGAGTTGTTGAGTTCAACCCAGCTGTGTTGCGATGAAGAGAAGGAAGAGATGAAGCTGTCTCACACAGATTCTGTAGCATTGCCGATTCCGTCTGGCACATCAAACTCTTCTGCCAACCAGAGTAATCAGAGCAGTTCTACCTTGCAGCAAGCTTCAGATGCAGAAATTTATCAATCTCAACATAGTGGAAATGGAAGACGGAAGGATACTTTGGCAAAGGTTGAGGATCTCCAAGTTAAATTTTTCCGCCTTCTCCAGCGGCTTGGCCAGTCAAAAGAAAACCTCTTGGTCGCAAAGGTTCTTTATCGGATGCACCTGGCAACTTTGATTCGTGCTGAGGAAACGGATCTGCAAAGAGTTAACCTTAGTAGCAGTGGAGCCCGAGAAATAGCAAACCAACATGAGGCAGCTGGTATGCCTCAATTGGACTTCTCCTGCAGAATACTTGTCCTTGGTAAAACAGGAGTTGGAAAAAGTGCCACTATAAACTCTATATTTGATCAAGAAAAAGCCACGACTAATGCTTTTCAACCTGCTACCGATTGCATCCAAGAAATTGTGGGAACTGTCAACGGGCTTAACATAACGTTTATTGATACCCCTGGTTTCCTGCCTTCCTCTACCAATAATGTGAAGAGAAATAAGAGGATCATGCTTTCTGTGAAGAGATTCATTAGAAAGTCACCTCCAGACATCGTTTTGTACTTTGAACGGCTTGATCTGATCAATTCTGGTTATAGTGACTTCCCACTTTTGAAACTCATAACCGAGGTATTTGGTGCGGCAATCTGGTTCAACACTATCTTAGTCATGACTCATTCATCCTCATCTATTCCAGAAGGACCTAACGGATATACTGTTAATTATGATTCGTATACTTCTCAATGTACTAACGTAATACAGCAGTATATACATCAGGCAATGTTAGATTCAAGGCTAGAAAACCCTGCACTTTTTGTTGAGAACCATCCTCAGTGCCCTAGAAATATTTTGGGGGAGAAAATCCTTCCTAATGGACAGGTTTGGAGATCTCAACTCTTGTTATTTTGCATTTGTACCAAAGTTCTAGGTGACGTAAATTCCCTCCTTAAGTTTCAGAATGGTGTGGAATTAGGACCGACAAACAGTGCCCGAGTTCCTTCTCTGCCCCATCTCCTTTCGTCCCTGTTACGCCATCGCTCTGTATCCAATCAAAGTGGAATTGATGATGAAATTGAGGAAATATTACTTTCAGACAAAGAAGAAGGAAATGAGTATGATCAACTTCCATCCATACGAATCCTGACAAAATCCCAATTTGAAAAGTTGTCCAAGTTGCAAAAAGAAGATTATCTGGATGAATTGGAATACAGGGAGACCCTTTACTTAAAGAAACAAATGAAAGAAGAGTACCGTAGACGCAAGGAGAAGTTACTTTTAGAAGAGCAAAAGTTTTCTAATAGTGATAATTCTGATGATCAACAGGGTCCTCCAGAACCTGTTCAGTTACCAGATATGGCTGTTCCTCTAAGTTTTGATTCAGATTGCGCTATACATAGATACCGCTGCCTTGTTGATAATGACCAATTACTTGTGAGACCTGTTCTTGATCCCCAAGGATGGGATCACGATGTGGGTTTTGATGGTATAAACTTGGAGACAACTACCGAAGTAAAGAAGAATGTATATGCCTCTGTTGTGGGACAAATGCATAAGAATAAGCAGGATTTCAATATTCAATCTGAGTGTGCTGCAGCCTATGTCAATCCGATGGGTCCTAGTTACTCTATCGGTGTTGACGTTCAATCTGTTGGTGGTAAAGATATGGTTTGTACCGTTCATAGCAACACAAAATTGAAAAACATAAAGCACAACATTGCTGACTGTGGTGTTTCTTTGACATCTTTCGGAAAGAAATACTACGTGGGTGCAAAACTTGAGGATACTTTGCTAATCGGAAAGAGATTAAAATTTGTGATTAATGCTGGCCGTATGGAAGGTCAGGGACAAGTGGCGCACGGTGGAAGTTTTGAAGCTTGTTTACGAGGGGAAGATTATCCCATCAGAAATGACAACTTAAGCCTGACAATGACAGTCCTCTCTTTCAATAAAGAGACGGTGTTGAGTGGTAATTTACAATCTGAGTTCAGGTTGAGTCGAAGCCTGAAAGCAACTGTTAGTGCTAATCTAAATAGTCGCAAAATGGGGCAAATATGTATTAAGACTAGTAGTTCTGAGCATTTACAAATTGCCTTGGTTGCAGTTTTCTCAATTTTGAAGGTTCTGTTACATAGAAAGGAAATCTAG
Protein sequence

>Msa1215530

MAEWSKAPDSSSVGRMKGFRDWVFSQLLSNSLISPTPLSGSNTLYLEDRPSEDLNDQEKGRDEVELLSSTQLCCDEEKEEMKLSHTDSVALPIPSGTSNSSANQSNQSSSTLQQASDAEIYQSQHSGNGRRKDTLAKVEDLQVKFFRLLQRLGQSKENLLVAKVLYRMHLATLIRAEETDLQRVNLSSSGAREIANQHEAAGMPQLDFSCRILVLGKTGVGKSATINSIFDQEKATTNAFQPATDCIQEIVGTVNGLNITFIDTPGFLPSSTNNVKRNKRIMLSVKRFIRKSPPDIVLYFERLDLINSGYSDFPLLKLITEVFGAAIWFNTILVMTHSSSSIPEGPNGYTVNYDSYTSQCTNVIQQYIHQAMLDSRLENPALFVENHPQCPRNILGEKILPNGQVWRSQLLLFCICTKVLGDVNSLLKFQNGVELGPTNSARVPSLPHLLSSLLRHRSVSNQSGIDDEIEEILLSDKEEGNEYDQLPSIRILTKSQFEKLSKLQKEDYLDELEYRETLYLKKQMKEEYRRRKEKLLLEEQKFSNSDNSDDQQGPPEPVQLPDMAVPLSFDSDCAIHRYRCLVDNDQLLVRPVLDPQGWDHDVGFDGINLETTTEVKKNVYASVVGQMHKNKQDFNIQSECAAAYVNPMGPSYSIGVDVQSVGGKDMVCTVHSNTKLKNIKHNIADCGVSLTSFGKKYYVGAKLEDTLLIGKRLKFVINAGRMEGQGQVAHGGSFEACLRGEDYPIRNDNLSLTMTVLSFNKETVLSGNLQSEFRLSRSLKATVSANLNSRKMGQICIKTSSSEHLQIALVAVFSILKVLLHRKEI*