Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128890 | AES61772.1 | 99.302 | 430 | 3 | 0 | 1 | 430 | 1 | 430 | 0.0 | 885 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128890 | sp|Q9LZI2|UXS2_ARATH | 78.815 | 439 | 73 | 5 | 1 | 426 | 1 | 432 | 0.0 | 702 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128890 | G7IF53 | 99.302 | 430 | 3 | 0 | 1 | 430 | 1 | 430 | 0.0 | 885 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021240 | Msa0128890 | -0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa0032700 | Msa0128890 | -0.813559 | 2.407702e-51 | -8.615850e-47 |
| Msa0047400 | Msa0128890 | -0.828235 | 1.006159e-54 | -8.615850e-47 |
| Msa0069150 | Msa0128890 | -0.814865 | 1.239300e-51 | -8.615850e-47 |
| Msa0076100 | Msa0128890 | -0.823627 | 1.251095e-53 | -8.615850e-47 |
| Msa0082290 | Msa0128890 | 0.913493 | 5.773464e-84 | -8.615850e-47 |
| Msa0097470 | Msa0128890 | -0.805273 | 1.445609e-49 | -8.615850e-47 |
| Msa0097730 | Msa0128890 | -0.807165 | 5.776215e-50 | -8.615850e-47 |
| Msa0115410 | Msa0128890 | -0.819951 | 8.870083e-53 | -8.615850e-47 |
| Msa0128890 | Msa0133390 | -0.821163 | 4.671494e-53 | -8.615850e-47 |
| Msa0128890 | Msa0147960 | -0.801085 | 1.063289e-48 | -8.615850e-47 |
| Msa0128890 | Msa0174760 | 0.892658 | 1.295992e-74 | -8.615850e-47 |
| Msa0128890 | Msa0179200 | -0.816275 | 6.012981e-52 | -8.615850e-47 |
| Msa0128890 | Msa0181560 | -0.810870 | 9.296896e-51 | -8.615850e-47 |
| Msa0128890 | Msa0184800 | -0.823213 | 1.563688e-53 | -8.615850e-47 |
| Msa0128890 | Msa0184900 | -0.808959 | 2.396406e-50 | -8.615850e-47 |
| Msa0128890 | Msa0199160 | -0.850778 | 1.362687e-60 | -8.615850e-47 |
| Msa0128890 | Msa0207150 | -0.829489 | 5.001371e-55 | -8.615850e-47 |
| Msa0128890 | Msa0217300 | -0.820503 | 6.625860e-53 | -8.615850e-47 |
| Msa0128890 | Msa0225080 | -0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0128890 | Msa0246510 | -0.814394 | 1.575330e-51 | -8.615850e-47 |
| Msa0128890 | Msa0259450 | -0.808292 | 3.327664e-50 | -8.615850e-47 |
| Msa0128890 | Msa0269430 | -0.805440 | 1.333366e-49 | -8.615850e-47 |
| Msa0128890 | Msa0288300 | -0.810344 | 1.207682e-50 | -8.615850e-47 |
| Msa0128890 | Msa0305630 | -0.800254 | 1.571118e-48 | -8.615850e-47 |
| Msa0128890 | Msa0315720 | -0.805095 | 1.574805e-49 | -8.615850e-47 |
| Msa0128890 | Msa0323790 | -0.808638 | 2.806701e-50 | -8.615850e-47 |
| Msa0128890 | Msa0343230 | -0.826346 | 2.853062e-54 | -8.615850e-47 |
| Msa0128890 | Msa0363180 | -0.803837 | 2.880901e-49 | -8.615850e-47 |
| Msa0128890 | Msa0371010 | -0.802657 | 5.056224e-49 | -8.615850e-47 |
| Msa0128890 | Msa0377990 | -0.811488 | 6.829157e-51 | -8.615850e-47 |
| Msa0128890 | Msa0380470 | -0.813901 | 2.023969e-51 | -8.615850e-47 |
| Msa0128890 | Msa0383110 | -0.818697 | 1.711825e-52 | -8.615850e-47 |
| Msa0128890 | Msa0384140 | -0.837147 | 6.169659e-57 | -8.615850e-47 |
| Msa0128890 | Msa0392120 | -0.817958 | 2.516955e-52 | -8.615850e-47 |
| Msa0128890 | Msa0422230 | -0.826748 | 2.288276e-54 | -8.615850e-47 |
| Msa0128890 | Msa0427960 | -0.800200 | 1.611491e-48 | -8.615850e-47 |
| Msa0128890 | Msa0428720 | -0.818730 | 1.683149e-52 | -8.615850e-47 |
| Msa0128890 | Msa0428740 | -0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0128890 | Msa0434830 | -0.803910 | 2.781965e-49 | -8.615850e-47 |
| Msa0128890 | Msa0450230 | -0.823752 | 1.169712e-53 | -8.615850e-47 |
| Msa0128890 | Msa0456450 | -0.806236 | 9.073627e-50 | -8.615850e-47 |
| Msa0128890 | Msa0459970 | -0.810652 | 1.036263e-50 | -8.615850e-47 |
| Msa0128890 | Msa0470080 | -0.837497 | 5.019098e-57 | -8.615850e-47 |
| Msa0128890 | Msa0472260 | -0.823923 | 1.066472e-53 | -8.615850e-47 |
| Msa0128890 | Msa0472560 | -0.827273 | 1.713567e-54 | -8.615850e-47 |
| Msa0128890 | Msa0474220 | -0.807500 | 4.904859e-50 | -8.615850e-47 |
| Msa0128890 | Msa0492330 | -0.806780 | 6.964680e-50 | -8.615850e-47 |
| Msa0128890 | Msa0500580 | -0.814766 | 1.303660e-51 | -8.615850e-47 |
| Msa0128890 | Msa0511040 | -0.801342 | 9.422823e-49 | -8.615850e-47 |
| Msa0128890 | Msa0518150 | -0.805690 | 1.181710e-49 | -8.615850e-47 |
| Msa0128890 | Msa0518580 | -0.800202 | 1.609590e-48 | -8.615850e-47 |
| Msa0128890 | Msa0524570 | -0.816095 | 6.596936e-52 | -8.615850e-47 |
| Msa0128890 | Msa0527210 | -0.801342 | 9.420630e-49 | -8.615850e-47 |
| Msa0128890 | Msa0528830 | -0.843379 | 1.452969e-58 | -8.615850e-47 |
| Msa0128890 | Msa0531270 | -0.816083 | 6.639807e-52 | -8.615850e-47 |
| Msa0128890 | Msa0538050 | -0.806346 | 8.601936e-50 | -8.615850e-47 |
| Msa0128890 | Msa0549700 | -0.802534 | 5.360274e-49 | -8.615850e-47 |
| Msa0128890 | Msa0567190 | -0.800579 | 1.348943e-48 | -8.615850e-47 |
| Msa0128890 | Msa0567360 | -0.816523 | 5.292872e-52 | -8.615850e-47 |
| Msa0128890 | Msa0567420 | -0.817707 | 2.867880e-52 | -8.615850e-47 |
| Msa0128890 | Msa0567490 | -0.838578 | 2.645474e-57 | -8.615850e-47 |
| Msa0128890 | Msa0567530 | -0.831268 | 1.838018e-55 | -8.615850e-47 |
| Msa0128890 | Msa0568300 | -0.805348 | 1.394214e-49 | -8.615850e-47 |
| Msa0128890 | Msa0572730 | -0.819719 | 1.002067e-52 | -8.615850e-47 |
| Msa0128890 | Msa0585720 | -0.801324 | 9.499270e-49 | -8.615850e-47 |
| Msa0128890 | Msa0585810 | -0.808255 | 3.388054e-50 | -8.615850e-47 |
| Msa0128890 | Msa0589680 | -0.836910 | 7.091818e-57 | -8.615850e-47 |
| Msa0128890 | Msa0605150 | -0.815937 | 7.157710e-52 | -8.615850e-47 |
| Msa0128890 | Msa0605210 | -0.801275 | 9.724771e-49 | -8.615850e-47 |
| Msa0128890 | Msa0610300 | -0.836335 | 9.940587e-57 | -8.615850e-47 |
| Msa0128890 | Msa0614020 | -0.808749 | 2.657950e-50 | -8.615850e-47 |
| Msa0128890 | Msa0625900 | -0.812359 | 4.412366e-51 | -8.615850e-47 |
| Msa0128890 | Msa0628440 | -0.820447 | 6.827289e-53 | -8.615850e-47 |
| Msa0128890 | Msa0632040 | -0.814437 | 1.541677e-51 | -8.615850e-47 |
| Msa0128890 | Msa0654560 | -0.827167 | 1.816509e-54 | -8.615850e-47 |
| Msa0128890 | Msa0659360 | -0.805418 | 1.348037e-49 | -8.615850e-47 |
| Msa0128890 | Msa0662670 | -0.817497 | 3.197984e-52 | -8.615850e-47 |
| Msa0128890 | Msa0663690 | -0.811547 | 6.627875e-51 | -8.615850e-47 |
| Msa0128890 | Msa0685810 | -0.806821 | 6.827830e-50 | -8.615850e-47 |
| Msa0128890 | Msa0685860 | -0.817630 | 2.985047e-52 | -8.615850e-47 |
| Msa0128890 | Msa0692480 | -0.818553 | 1.846368e-52 | -8.615850e-47 |
| Msa0128890 | Msa0693050 | -0.818498 | 1.899315e-52 | -8.615850e-47 |
| Msa0128890 | Msa0696600 | -0.822336 | 2.501643e-53 | -8.615850e-47 |
| Msa0128890 | Msa0704790 | -0.804824 | 1.794867e-49 | -8.615850e-47 |
| Msa0128890 | Msa0708870 | -0.819223 | 1.300361e-52 | -8.615850e-47 |
| Msa0128890 | Msa0797180 | -0.802649 | 5.074408e-49 | -8.615850e-47 |
| Msa0128890 | Msa0879820 | -0.807216 | 5.632565e-50 | -8.615850e-47 |
| Msa0128890 | Msa0906100 | -0.809320 | 2.005393e-50 | -8.615850e-47 |
| Msa0128890 | Msa0928060 | -0.809464 | 1.867716e-50 | -8.615850e-47 |
| Msa0128890 | Msa0934800 | -0.827336 | 1.655053e-54 | -8.615850e-47 |
| Msa0128890 | Msa0967890 | -0.801981 | 6.967711e-49 | -8.615850e-47 |
| Msa0128890 | Msa0968060 | -0.806932 | 6.469920e-50 | -8.615850e-47 |
| Msa0128890 | Msa0998660 | -0.817008 | 4.119151e-52 | -8.615850e-47 |
| Msa0128890 | Msa1031620 | -0.819245 | 1.285495e-52 | -8.615850e-47 |
| Msa0128890 | Msa1031650 | -0.800269 | 1.560221e-48 | -8.615850e-47 |
| Msa0128890 | Msa1033250 | -0.822424 | 2.386022e-53 | -8.615850e-47 |
| Msa0128890 | Msa1036260 | -0.808296 | 3.320986e-50 | -8.615850e-47 |
| Msa0128890 | Msa1056790 | -0.846291 | 2.382169e-59 | -8.615850e-47 |
| Msa0128890 | Msa1066770 | 0.806583 | 7.667573e-50 | -8.615850e-47 |
| Msa0128890 | Msa1067000 | 0.814463 | 1.521053e-51 | -8.615850e-47 |
| Msa0128890 | Msa1072850 | -0.816577 | 5.147811e-52 | -8.615850e-47 |
| Msa0128890 | Msa1084210 | -0.804651 | 1.950429e-49 | -8.615850e-47 |
| Msa0128890 | Msa1084340 | -0.806858 | 6.704987e-50 | -8.615850e-47 |
| Msa0128890 | Msa1088000 | -0.805092 | 1.577189e-49 | -8.615850e-47 |
| Msa0128890 | Msa1092430 | -0.809567 | 1.774953e-50 | -8.615850e-47 |
| Msa0128890 | Msa1113460 | -0.820503 | 6.628778e-53 | -8.615850e-47 |
| Msa0128890 | Msa1118870 | -0.814622 | 1.402611e-51 | -8.615850e-47 |
| Msa0128890 | Msa1118890 | -0.809871 | 1.526919e-50 | -8.615850e-47 |
| Msa0128890 | Msa1122710 | -0.815338 | 9.731115e-52 | -8.615850e-47 |
| Msa0128890 | Msa1126980 | -0.806807 | 6.875626e-50 | -8.615850e-47 |
| Msa0128890 | Msa1128230 | -0.819055 | 1.419667e-52 | -8.615850e-47 |
| Msa0128890 | Msa1129880 | -0.802534 | 5.361442e-49 | -8.615850e-47 |
| Msa0128890 | Msa1130850 | -0.806819 | 6.833615e-50 | -8.615850e-47 |
| Msa0128890 | Msa1143060 | -0.826949 | 2.048160e-54 | -8.615850e-47 |
| Msa0128890 | Msa1156430 | -0.810498 | 1.118885e-50 | -8.615850e-47 |
| Msa0128890 | Msa1156480 | -0.806851 | 6.729695e-50 | -8.615850e-47 |
| Msa0128890 | Msa1158540 | -0.816171 | 6.346038e-52 | -8.615850e-47 |
| Msa0128890 | Msa1161060 | -0.813370 | 2.648578e-51 | -8.615850e-47 |
| Msa0128890 | Msa1184100 | -0.800803 | 1.214194e-48 | -8.615850e-47 |
| Msa0128890 | Msa1207660 | -0.812850 | 3.445434e-51 | -8.615850e-47 |
| Msa0128890 | Msa1207770 | -0.823035 | 1.720220e-53 | -8.615850e-47 |
| Msa0128890 | Msa1225240 | -0.801894 | 7.260145e-49 | -8.615850e-47 |
| Msa0128890 | Msa1228260 | -0.800054 | 1.725587e-48 | -8.615850e-47 |
| Msa0128890 | Msa1244380 | -0.828720 | 7.684145e-55 | -8.615850e-47 |
| Msa0128890 | Msa1257860 | -0.807398 | 5.155451e-50 | -8.615850e-47 |
| Msa0128890 | Msa1271220 | -0.802759 | 4.816961e-49 | -8.615850e-47 |
| Msa0128890 | Msa1301610 | -0.812327 | 4.483526e-51 | -8.615850e-47 |
| Msa0128890 | Msa1308430 | -0.806871 | 6.665226e-50 | -8.615850e-47 |
| Msa0128890 | Msa1327690 | -0.811357 | 7.289243e-51 | -8.615850e-47 |
| Msa0128890 | Msa1331530 | -0.820991 | 5.119184e-53 | -8.615850e-47 |
| Msa0128890 | Msa1338600 | -0.814739 | 1.321395e-51 | -8.615850e-47 |
| Msa0128890 | Msa1341710 | -0.800117 | 1.675461e-48 | -8.615850e-47 |
| Msa0128890 | Msa1342360 | -0.805869 | 1.083742e-49 | -8.615850e-47 |
| Msa0128890 | Msa1357090 | -0.809153 | 2.177842e-50 | -8.615850e-47 |
| Msa0128890 | Msa1361580 | -0.800255 | 1.570191e-48 | -8.615850e-47 |
| Msa0128890 | Msa1369220 | -0.813874 | 2.052470e-51 | -8.615850e-47 |
| Msa0128890 | Msa1375980 | -0.806921 | 6.502546e-50 | -8.615850e-47 |
| Msa0128890 | Msa1377980 | -0.826526 | 2.584614e-54 | -8.615850e-47 |
| Msa0128890 | Msa1379790 | 0.880532 | 5.081366e-70 | -8.615850e-47 |
| Msa0128890 | Msa1380740 | 0.803683 | 3.100752e-49 | -8.615850e-47 |
| Msa0128890 | Msa1395380 | -0.829881 | 4.015421e-55 | -8.615850e-47 |
| Msa0128890 | Msa1400830 | -0.805204 | 1.494709e-49 | -8.615850e-47 |
| Msa0128890 | Msa1401640 | -0.804836 | 1.784314e-49 | -8.615850e-47 |
| Msa0128890 | Msa1407770 | -0.825580 | 4.337413e-54 | -8.615850e-47 |
| Msa0128890 | Msa1408280 | -0.825990 | 3.468136e-54 | -8.615850e-47 |
| Msa0128890 | Msa1411820 | -0.825920 | 3.602063e-54 | -8.615850e-47 |
| Msa0128890 | Msa1412810 | -0.825316 | 5.010164e-54 | -8.615850e-47 |
| Msa0128890 | Msa1437740 | -0.821158 | 4.684389e-53 | -8.615850e-47 |
| Msa0128890 | Msa1444690 | -0.808817 | 2.570434e-50 | -8.615850e-47 |
| Msa0128890 | Msa1452800 | -0.803260 | 3.795265e-49 | -8.615850e-47 |
| Msa0128890 | Msa1454300 | -0.829550 | 4.834482e-55 | -8.615850e-47 |
| Msa0128890 | Msa1456170 | -0.826980 | 2.014359e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128890 | MtrunA17_Chr1g0195521 | 94.678 | 451 | 3 | 1 | 1 | 430 | 1 | 451 | 0.0 | 875 |
| Msa0128890 | MtrunA17_Chr4g0067461 | 70.938 | 437 | 106 | 6 | 1 | 430 | 1 | 423 | 0.0 | 615 |
| Msa0128890 | MtrunA17_Chr4g0031131 | 70.978 | 317 | 86 | 2 | 115 | 425 | 29 | 345 | 1.46e-164 | 466 |
| Msa0128890 | MtrunA17_Chr2g0327981 | 71.704 | 311 | 82 | 2 | 115 | 419 | 35 | 345 | 6.51e-162 | 460 |
| Msa0128890 | MtrunA17_Chr1g0182091 | 84.956 | 226 | 34 | 0 | 202 | 427 | 5 | 230 | 2.60e-142 | 405 |
| Msa0128890 | MtrunA17_Chr1g0182071 | 55.051 | 198 | 77 | 3 | 8 | 205 | 14 | 199 | 6.49e-63 | 202 |
| Msa0128890 | MtrunA17_Chr7g0274131 | 27.711 | 332 | 209 | 10 | 118 | 429 | 29 | 349 | 2.50e-26 | 109 |
| Msa0128890 | MtrunA17_Chr1g0190771 | 26.852 | 324 | 218 | 8 | 118 | 426 | 28 | 347 | 3.56e-26 | 108 |
| Msa0128890 | MtrunA17_Chr4g0027491 | 28.177 | 362 | 193 | 14 | 105 | 404 | 5 | 361 | 2.42e-25 | 106 |
| Msa0128890 | MtrunA17_Chr1g0208111 | 27.714 | 350 | 195 | 12 | 116 | 408 | 17 | 365 | 8.38e-25 | 105 |
| Msa0128890 | MtrunA17_Chr8g0359401 | 27.796 | 313 | 193 | 12 | 120 | 408 | 9 | 312 | 7.26e-24 | 104 |
| Msa0128890 | MtrunA17_Chr2g0314601 | 27.476 | 313 | 194 | 12 | 120 | 408 | 9 | 312 | 1.09e-22 | 100 |
| Msa0128890 | MtrunA17_Chr1g0208571 | 28.060 | 335 | 195 | 13 | 116 | 408 | 17 | 347 | 2.14e-22 | 98.2 |
| Msa0128890 | MtrunA17_Chr1g0147841 | 25.466 | 322 | 207 | 13 | 120 | 417 | 7 | 319 | 8.06e-22 | 98.2 |
| Msa0128890 | MtrunA17_Chr7g0230291 | 26.555 | 418 | 225 | 17 | 42 | 412 | 24 | 406 | 6.86e-21 | 94.4 |
| Msa0128890 | MtrunA17_Chr4g0073351 | 27.479 | 353 | 201 | 15 | 98 | 412 | 84 | 419 | 1.95e-20 | 93.2 |
| Msa0128890 | MtrunA17_Chr3g0121661 | 25.352 | 426 | 249 | 20 | 27 | 408 | 19 | 419 | 1.84e-19 | 90.1 |
| Msa0128890 | MtrunA17_Chr4g0011281 | 25.816 | 337 | 202 | 12 | 115 | 412 | 98 | 425 | 6.75e-19 | 88.6 |
| Msa0128890 | MtrunA17_Chr5g0398811 | 26.946 | 334 | 196 | 12 | 118 | 412 | 90 | 414 | 5.21e-17 | 82.8 |
| Msa0128890 | MtrunA17_Chr4g0056941 | 25.901 | 444 | 250 | 19 | 12 | 408 | 2 | 413 | 4.08e-16 | 80.1 |
| Msa0128890 | MtrunA17_Chr8g0388261 | 27.077 | 325 | 185 | 15 | 120 | 401 | 6 | 321 | 6.55e-15 | 75.5 |
| Msa0128890 | MtrunA17_Chr5g0396571 | 26.462 | 325 | 187 | 15 | 120 | 401 | 6 | 321 | 6.84e-15 | 75.5 |
| Msa0128890 | MtrunA17_Chr4g0076751 | 26.970 | 330 | 191 | 13 | 120 | 406 | 27 | 349 | 1.79e-14 | 74.7 |
| Msa0128890 | MtrunA17_Chr5g0396581 | 25.231 | 325 | 191 | 15 | 120 | 401 | 49 | 364 | 2.31e-13 | 71.2 |
| Msa0128890 | MtrunA17_Chr8g0386331 | 24.620 | 329 | 192 | 15 | 119 | 401 | 7 | 325 | 2.52e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0128890 | AT3G62830.2 | 78.815 | 439 | 73 | 5 | 1 | 426 | 1 | 432 | 0.0 | 702 |
| Msa0128890 | AT3G62830.1 | 78.815 | 439 | 73 | 5 | 1 | 426 | 1 | 432 | 0.0 | 702 |
| Msa0128890 | AT2G47650.1 | 78.767 | 438 | 75 | 5 | 1 | 425 | 1 | 433 | 0.0 | 695 |
| Msa0128890 | AT2G47650.2 | 77.703 | 444 | 75 | 6 | 1 | 425 | 1 | 439 | 0.0 | 688 |
| Msa0128890 | AT3G53520.1 | 71.703 | 417 | 103 | 4 | 19 | 427 | 25 | 434 | 0.0 | 604 |
| Msa0128890 | AT3G53520.2 | 71.223 | 417 | 103 | 5 | 19 | 427 | 25 | 432 | 0.0 | 596 |
| Msa0128890 | AT3G53520.4 | 67.955 | 440 | 103 | 5 | 19 | 427 | 25 | 457 | 0.0 | 591 |
| Msa0128890 | AT2G28760.4 | 72.669 | 311 | 79 | 2 | 115 | 419 | 59 | 369 | 8.94e-167 | 473 |
| Msa0128890 | AT2G28760.1 | 72.669 | 311 | 79 | 2 | 115 | 419 | 28 | 338 | 9.25e-167 | 472 |
| Msa0128890 | AT2G28760.2 | 72.669 | 311 | 79 | 2 | 115 | 419 | 28 | 338 | 9.25e-167 | 472 |
| Msa0128890 | AT2G28760.3 | 72.669 | 311 | 79 | 2 | 115 | 419 | 28 | 338 | 9.25e-167 | 472 |
| Msa0128890 | AT3G46440.2 | 71.203 | 316 | 84 | 3 | 115 | 424 | 26 | 340 | 5.19e-165 | 468 |
| Msa0128890 | AT3G46440.1 | 71.203 | 316 | 84 | 3 | 115 | 424 | 26 | 340 | 5.19e-165 | 468 |
| Msa0128890 | AT5G59290.1 | 71.753 | 308 | 81 | 2 | 118 | 419 | 30 | 337 | 9.62e-164 | 464 |
| Msa0128890 | AT5G59290.2 | 71.753 | 308 | 81 | 2 | 118 | 419 | 45 | 352 | 1.03e-163 | 465 |
| Msa0128890 | AT5G59290.4 | 71.753 | 308 | 81 | 2 | 118 | 419 | 1 | 308 | 1.54e-163 | 462 |
| Msa0128890 | AT5G59290.3 | 71.753 | 308 | 81 | 2 | 118 | 419 | 23 | 330 | 5.02e-163 | 462 |
| Msa0128890 | AT3G53520.3 | 72.188 | 320 | 74 | 4 | 19 | 330 | 25 | 337 | 1.06e-161 | 459 |
| Msa0128890 | AT1G08200.1 | 28.286 | 350 | 185 | 15 | 116 | 404 | 16 | 360 | 8.40e-26 | 108 |
| Msa0128890 | AT2G27860.1 | 28.161 | 348 | 184 | 14 | 118 | 404 | 18 | 360 | 1.71e-25 | 107 |
| Msa0128890 | AT5G28840.2 | 27.964 | 329 | 217 | 9 | 116 | 429 | 26 | 349 | 3.61e-25 | 106 |
| Msa0128890 | AT5G28840.1 | 27.964 | 329 | 217 | 9 | 116 | 429 | 26 | 349 | 3.61e-25 | 106 |
| Msa0128890 | AT3G14790.1 | 27.796 | 313 | 193 | 11 | 120 | 408 | 9 | 312 | 1.07e-24 | 107 |
| Msa0128890 | AT3G14790.2 | 27.974 | 311 | 195 | 11 | 120 | 408 | 12 | 315 | 1.14e-24 | 107 |
| Msa0128890 | AT1G78570.1 | 27.329 | 322 | 201 | 11 | 120 | 417 | 9 | 321 | 7.69e-24 | 104 |
| Msa0128890 | AT1G53500.1 | 27.187 | 320 | 204 | 12 | 120 | 417 | 11 | 323 | 9.13e-24 | 104 |
| Msa0128890 | AT2G45310.1 | 25.770 | 357 | 203 | 13 | 117 | 427 | 96 | 436 | 2.08e-20 | 93.6 |
| Msa0128890 | AT1G02000.1 | 25.714 | 350 | 212 | 13 | 115 | 427 | 89 | 427 | 6.17e-19 | 89.0 |
| Msa0128890 | AT4G30440.1 | 26.243 | 362 | 194 | 15 | 98 | 412 | 77 | 412 | 9.32e-19 | 88.6 |
| Msa0128890 | AT4G00110.1 | 25.225 | 333 | 201 | 12 | 115 | 408 | 88 | 411 | 1.89e-18 | 87.4 |
| Msa0128890 | AT3G23820.1 | 25.740 | 338 | 189 | 13 | 117 | 408 | 111 | 432 | 5.82e-17 | 83.2 |
| Msa0128890 | AT4G12250.1 | 25.356 | 351 | 208 | 13 | 117 | 425 | 95 | 433 | 1.91e-15 | 78.6 |
| Msa0128890 | AT4G10960.1 | 27.052 | 329 | 190 | 15 | 120 | 406 | 6 | 326 | 1.04e-13 | 72.4 |
| Msa0128890 | AT2G28755.1 | 49.123 | 57 | 29 | 0 | 328 | 384 | 4 | 60 | 2.20e-13 | 65.1 |
| Msa0128890 | AT4G23920.1 | 25.816 | 337 | 198 | 15 | 120 | 415 | 5 | 330 | 5.54e-13 | 70.5 |
Find 165 sgRNAs with CRISPR-Local
Find 20 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGGAGCCTTTGACAGTTTA+TGG | 0.132583 | 1_3:-58720831 | Msa0128890:CDS |
| CATCTGGGTCGATTGTTTCT+TGG | 0.195325 | 1_3:+58718819 | None:intergenic |
| GAGAACGTTATGCATCATTT+TGG | 0.259027 | 1_3:-58722478 | Msa0128890:CDS |
| CCTGTTTGCCATATTATATC+TGG | 0.276091 | 1_3:-58718262 | Msa0128890:three_prime_UTR |
| TCCATCATCTAAGCACATTC+TGG | 0.277067 | 1_3:+58721003 | None:intergenic |
| CTGTACACTATCTTTGCATC+TGG | 0.284479 | 1_3:+58718803 | None:intergenic |
| AGCCATGGTTTGTTTGGTTT+TGG | 0.308012 | 1_3:+58722883 | None:intergenic |
| TTTCCCTTTCTCACTCTCTA+AGG | 0.308944 | 1_3:+58718579 | None:intergenic |
| CTACAAAACCAGATATAATA+TGG | 0.320793 | 1_3:+58718254 | None:intergenic |
| GCTAGGATCTTTAATACATA+TGG | 0.330642 | 1_3:-58721028 | Msa0128890:CDS |
| ACATACCACCATCAAGAATT+AGG | 0.334411 | 1_3:+58718616 | None:intergenic |
| ATCCTCAGAAGGAGACTTAC+TGG | 0.338208 | 1_3:-58722086 | Msa0128890:CDS |
| ATTCAACTTATTTGTGAAGT+TGG | 0.354971 | 1_3:+58718293 | None:intergenic |
| GGAGGGTCTAATGCGCCTTA+TGG | 0.364799 | 1_3:-58719555 | Msa0128890:CDS |
| GCCGCGGTGGTTCATTCGTC+CGG | 0.369904 | 1_3:-58722646 | Msa0128890:CDS |
| ACAGAGAGCCATGGTTTGTT+TGG | 0.370816 | 1_3:+58722877 | None:intergenic |
| TCCTTAGCATTACTAATATC+AGG | 0.371147 | 1_3:+58718746 | None:intergenic |
| CCATCAACCGATCCACTAGA+TGG | 0.373651 | 1_3:+58722551 | None:intergenic |
| CCCTTGCGCAGGTCCACCTT+GGG | 0.374902 | 1_3:+58718707 | None:intergenic |
| GTATGCTACCTCTACCTTCC+TGG | 0.376519 | 1_3:-58718230 | Msa0128890:three_prime_UTR |
| ACTGGTGGAGCGGGGTTCGT+TGG | 0.383783 | 1_3:-58722577 | Msa0128890:CDS |
| TATCCCTAACGGAATCTTCC+CGG | 0.388157 | 1_3:+58722627 | None:intergenic |
| GCGCAAGGGCCTCCCACTAA+TGG | 0.391517 | 1_3:-58718693 | Msa0128890:CDS |
| AGGAGCCTTTGACAGTTTAT+GGG | 0.392286 | 1_3:-58720830 | Msa0128890:CDS |
| CTGGTGGAGCGGGGTTCGTT+GGG | 0.393802 | 1_3:-58722576 | Msa0128890:CDS |
| TCAAATTATTTACCTAGATT+AGG | 0.396832 | 1_3:-58718196 | Msa0128890:three_prime_UTR |
| ATCGTGGTGACTGGTGGAGC+GGG | 0.397599 | 1_3:-58722586 | Msa0128890:CDS |
| CATCAGATCCACCTTCCTTA+TGG | 0.397788 | 1_3:+58718639 | None:intergenic |
| GGGCTGCGGATCGTGGTGAC+TGG | 0.410525 | 1_3:-58722595 | Msa0128890:CDS |
| TTCCCTCATCGTAGCAGCTT+CGG | 0.415039 | 1_3:+58721276 | None:intergenic |
| CCTCTACCTTCCTGGACACT+CGG | 0.426101 | 1_3:-58718222 | Msa0128890:three_prime_UTR |
| ATCTGATGCCTAATTCTTGA+TGG | 0.429722 | 1_3:-58718624 | Msa0128890:exon |
| AGTTGGAGCAAAATAGAATA+AGG | 0.433617 | 1_3:+58718310 | None:intergenic |
| TATAGATAGAATTATATAGA+TGG | 0.433980 | 1_3:+58718396 | None:intergenic |
| CATAAATGAAAGCCTAATCT+AGG | 0.435969 | 1_3:+58718184 | None:intergenic |
| GCCCTTGCGCAGGTCCACCT+TGG | 0.438364 | 1_3:+58718706 | None:intergenic |
| CCATCTAGTGGATCGGTTGA+TGG | 0.441443 | 1_3:-58722551 | Msa0128890:CDS |
| ATGCTAAGGAGCACCTTGGC+TGG | 0.442296 | 1_3:-58718733 | Msa0128890:CDS |
| TGGGGAAACGTTAATCCAAT+TGG | 0.447650 | 1_3:-58722066 | Msa0128890:intron |
| CCAGATATAATATGGCAAAC+AGG | 0.449264 | 1_3:+58718262 | None:intergenic |
| GTTGTTGATAATTTCTTCAC+TGG | 0.449487 | 1_3:-58722508 | Msa0128890:CDS |
| CGGAAGTCGGAAACCATTAG+TGG | 0.450288 | 1_3:+58718680 | None:intergenic |
| CCATCATCTAAGCACATTCT+GGG | 0.451125 | 1_3:+58721004 | None:intergenic |
| TACGGCTGAGACATTGACTA+TGG | 0.452590 | 1_3:-58721249 | Msa0128890:CDS |
| CAACAAAAGTAACATTTAAG+AGG | 0.457596 | 1_3:+58718491 | None:intergenic |
| CAATCAATCTTCAAAGATTG+AGG | 0.457660 | 1_3:+58718459 | None:intergenic |
| TAATTTCTTCACTGGTAGAA+AGG | 0.458747 | 1_3:-58722500 | Msa0128890:CDS |
| CTGCGGATCGTGGTGACTGG+TGG | 0.460556 | 1_3:-58722592 | Msa0128890:CDS |
| CCGTTCAACCTTGGAAATCC+TGG | 0.460579 | 1_3:-58719515 | Msa0128890:CDS |
| CTCTACCTTCCTGGACACTC+GGG | 0.462862 | 1_3:-58718221 | Msa0128890:three_prime_UTR |
| TCGTCCGGGAAGATTCCGTT+AGG | 0.467216 | 1_3:-58722631 | Msa0128890:CDS |
| GGGTTGAACTTGTAATGAAC+AGG | 0.472521 | 1_3:+58722364 | None:intergenic |
| ACAAGTACAAGTGAGGTCTA+TGG | 0.474387 | 1_3:-58722123 | Msa0128890:CDS |
| ACCTAAGTGTTTGTTATCCT+CGG | 0.475042 | 1_3:+58718547 | None:intergenic |
| GTATGGATGGGTTGAGAATG+AGG | 0.476738 | 1_3:+58722738 | None:intergenic |
| CCTTTGACAGTTTATGGGGA+TGG | 0.479069 | 1_3:-58720825 | Msa0128890:CDS |
| CTTGGATTGGCGAAAAGAGT+TGG | 0.481126 | 1_3:-58722162 | Msa0128890:CDS |
| TGTACCTTAGAGAGTGAGAA+AGG | 0.484526 | 1_3:-58718583 | Msa0128890:three_prime_UTR |
| GAAATTGATAAATGAAATCA+TGG | 0.484544 | 1_3:+58718422 | None:intergenic |
| GATGAAGAAGTTGAAGATGA+AGG | 0.484610 | 1_3:+58722763 | None:intergenic |
| CGTTAGTAACTTCGTTGCTC+AGG | 0.484924 | 1_3:-58720975 | Msa0128890:intron |
| CCACCTTGGGTTCCCAGCCA+AGG | 0.489999 | 1_3:+58718720 | None:intergenic |
| CTTTGACAGTTTATGGGGAT+GGG | 0.494567 | 1_3:-58720824 | Msa0128890:CDS |
| CCCTTCCTCTTTATCCCTAA+CGG | 0.497420 | 1_3:+58722616 | None:intergenic |
| GGATAAAGAGGAAGGGGCTG+CGG | 0.500833 | 1_3:-58722609 | Msa0128890:CDS |
| CATGTGGGGCCGTTCAACCT+TGG | 0.503780 | 1_3:-58719524 | Msa0128890:CDS |
| AATGAAATCATGGCTGGCTA+TGG | 0.506217 | 1_3:+58718432 | None:intergenic |
| TACCATGCTTGAACTTGCCA+AGG | 0.506479 | 1_3:-58719486 | Msa0128890:intron |
| TTGATAAATGAAATCATGGC+TGG | 0.507655 | 1_3:+58718426 | None:intergenic |
| CCACATGTTCCCCTTCCATA+AGG | 0.508074 | 1_3:+58719540 | None:intergenic |
| GTGGGAACATTGAACATGCT+TGG | 0.509297 | 1_3:-58722180 | Msa0128890:CDS |
| TGCTAAGGAGCACCTTGGCT+GGG | 0.512225 | 1_3:-58718732 | Msa0128890:CDS |
| GGTCTAATGCGCCTTATGGA+AGG | 0.512523 | 1_3:-58719551 | Msa0128890:CDS |
| CCGCGGTGGTTCATTCGTCC+GGG | 0.513229 | 1_3:-58722645 | Msa0128890:CDS |
| TCGAGTCTGATTCGTATGGA+TGG | 0.513838 | 1_3:+58722725 | None:intergenic |
| TCCTCAGAAGGAGACTTACT+GGG | 0.519434 | 1_3:-58722085 | Msa0128890:CDS |
| CCAGGATTTCCAAGGTTGAA+CGG | 0.522672 | 1_3:+58719515 | None:intergenic |
| CCCCAGTAAGTCTCCTTCTG+AGG | 0.524128 | 1_3:+58722084 | None:intergenic |
| AACATTGAACATGCTTGGAT+TGG | 0.524725 | 1_3:-58722175 | Msa0128890:CDS |
| TTGGGTCCCATCTAGTGGAT+CGG | 0.526167 | 1_3:-58722558 | Msa0128890:CDS |
| AGTTCAGAATTGACTTTCAG+AGG | 0.526556 | 1_3:-58722940 | Msa0128890:CDS |
| TAAGCAACGCGCTGCCGCGG+TGG | 0.526605 | 1_3:-58722659 | Msa0128890:CDS |
| CCGAGTGTCCAGGAAGGTAG+AGG | 0.526772 | 1_3:+58718222 | None:intergenic |
| TGATCAACTTCAAGAAGAAG+AGG | 0.527982 | 1_3:+58722415 | None:intergenic |
| GTTCGTTGGGTCCCATCTAG+TGG | 0.529461 | 1_3:-58722563 | Msa0128890:CDS |
| TCCTTCTGAGGATGCTGCAG+AGG | 0.534418 | 1_3:+58722096 | None:intergenic |
| TTTCCAATACGTCTCTGACT+TGG | 0.538596 | 1_3:-58720787 | Msa0128890:intron |
| TTGTAATGAACAGGAGAAGC+AGG | 0.538705 | 1_3:+58722373 | None:intergenic |
| GATAGAATTATATAGATGGC+AGG | 0.541480 | 1_3:+58718400 | None:intergenic |
| AATCAATCTTCAAAGATTGA+GGG | 0.543476 | 1_3:+58718460 | None:intergenic |
| GCCTGATATTAGTAATGCTA+AGG | 0.543495 | 1_3:-58718747 | Msa0128890:CDS |
| ACCCAAGGTGGACCTGCGCA+AGG | 0.544301 | 1_3:-58718708 | Msa0128890:CDS |
| CCATCCCCATAAACTGTCAA+AGG | 0.544642 | 1_3:+58720825 | None:intergenic |
| TTACCAAGTCAGAGACGTAT+TGG | 0.546881 | 1_3:+58720784 | None:intergenic |
| GTCTAATGCGCCTTATGGAA+GGG | 0.547257 | 1_3:-58719550 | Msa0128890:CDS |
| TACCTTGGCAAGTTCAAGCA+TGG | 0.549103 | 1_3:+58719484 | None:intergenic |
| TGTACACTATCTTTGCATCT+GGG | 0.549639 | 1_3:+58718804 | None:intergenic |
| GCACCTTGGCTGGGAACCCA+AGG | 0.550808 | 1_3:-58718723 | Msa0128890:CDS |
| TCACAGAGGGGCCGGTGTAG+AGG | 0.552066 | 1_3:-58721222 | Msa0128890:intron |
| TTTATGTTGGCACAGGTGGA+GGG | 0.552335 | 1_3:-58719572 | Msa0128890:intron |
| CCTTATGGAAGGGGAACATG+TGG | 0.552410 | 1_3:-58719540 | Msa0128890:CDS |
| ATGGATTATCACAGAGGGGC+CGG | 0.554708 | 1_3:-58721230 | Msa0128890:CDS |
| TTTGGTGACCATAAGGAAGG+TGG | 0.556410 | 1_3:-58718647 | Msa0128890:CDS |
| CCCAGAATGTGCTTAGATGA+TGG | 0.557030 | 1_3:-58721004 | Msa0128890:CDS |
| TCTAATGCGCCTTATGGAAG+GGG | 0.557519 | 1_3:-58719549 | Msa0128890:CDS |
| CTACATGCAGGCGCTGAGGA+AGG | 0.558115 | 1_3:-58720850 | Msa0128890:intron |
| TCCGTTAGGGATAAAGAGGA+AGG | 0.560397 | 1_3:-58722617 | Msa0128890:CDS |
| CGAGTCTGATTCGTATGGAT+GGG | 0.561120 | 1_3:+58722726 | None:intergenic |
| TCACGAAGCATGTAACGAAT+CGG | 0.561879 | 1_3:+58722847 | None:intergenic |
| TCCTCTGCAGCATCCTCAGA+AGG | 0.565302 | 1_3:-58722097 | Msa0128890:CDS |
| AGATTCCGTTAGGGATAAAG+AGG | 0.565904 | 1_3:-58722621 | Msa0128890:CDS |
| GATCGTGGTGACTGGTGGAG+CGG | 0.568659 | 1_3:-58722587 | Msa0128890:CDS |
| CGTTAGGGATAAAGAGGAAG+GGG | 0.570309 | 1_3:-58722615 | Msa0128890:CDS |
| AATTTGAACCCCGAGTGTCC+AGG | 0.571273 | 1_3:+58718212 | None:intergenic |
| TCTTCAAAGATTGAGGGAGA+AGG | 0.575434 | 1_3:+58718466 | None:intergenic |
| TCAAGCATGGTAAATTCACC+AGG | 0.575463 | 1_3:+58719497 | None:intergenic |
| TTAGTGGGAGGCCCTTGCGC+AGG | 0.576261 | 1_3:+58718696 | None:intergenic |
| GCGCGTTGCTTATACACTGC+CGG | 0.578384 | 1_3:+58722670 | None:intergenic |
| TAAATTCACCAGGATTTCCA+AGG | 0.581095 | 1_3:+58719507 | None:intergenic |
| GTATAAGCAACGCGCTGCCG+CGG | 0.587453 | 1_3:-58722662 | Msa0128890:CDS |
| GAGATCGAGTCTGATTCGTA+TGG | 0.587889 | 1_3:+58722721 | None:intergenic |
| AGGTATGATTGTGAAGAATA+CGG | 0.588806 | 1_3:+58722783 | None:intergenic |
| GGAGCCTTTGACAGTTTATG+GGG | 0.589496 | 1_3:-58720829 | Msa0128890:CDS |
| CGTCCGGGAAGATTCCGTTA+GGG | 0.590511 | 1_3:-58722630 | Msa0128890:CDS |
| GTCCGAAGCTGCTACGATGA+GGG | 0.595012 | 1_3:-58721278 | Msa0128890:CDS |
| CCCAAGGTGGACCTGCGCAA+GGG | 0.598380 | 1_3:-58718707 | Msa0128890:CDS |
| GAGGAAGGGGCTGCGGATCG+TGG | 0.599017 | 1_3:-58722602 | Msa0128890:CDS |
| TTATGGAAGGGGAACATGTG+GGG | 0.599343 | 1_3:-58719538 | Msa0128890:CDS |
| TGGATCGGTTGATGGCGAGA+GGG | 0.602798 | 1_3:-58722543 | Msa0128890:CDS |
| CTTATGGAAGGGGAACATGT+GGG | 0.604163 | 1_3:-58719539 | Msa0128890:CDS |
| TGACTATGGATTATCACAGA+GGG | 0.606976 | 1_3:-58721235 | Msa0128890:CDS |
| GGACGAATTACAGAGAGCCA+TGG | 0.607729 | 1_3:+58722868 | None:intergenic |
| GTACCTTAGAGAGTGAGAAA+GGG | 0.610517 | 1_3:-58718582 | Msa0128890:three_prime_UTR |
| TCGTGGTGACTGGTGGAGCG+GGG | 0.612656 | 1_3:-58722585 | Msa0128890:CDS |
| CCTTGGCTGGGAACCCAAGG+TGG | 0.613832 | 1_3:-58718720 | Msa0128890:CDS |
| CATCAACCGATCCACTAGAT+GGG | 0.613973 | 1_3:+58722552 | None:intergenic |
| GTGGATCGGTTGATGGCGAG+AGG | 0.617231 | 1_3:-58722544 | Msa0128890:CDS |
| CCGTTAGGGATAAAGAGGAA+GGG | 0.621408 | 1_3:-58722616 | Msa0128890:CDS |
| GGATCGGTTGATGGCGAGAG+GGG | 0.622105 | 1_3:-58722542 | Msa0128890:CDS |
| CACCAAAACCAAACAAACCA+TGG | 0.623979 | 1_3:-58722885 | Msa0128890:CDS |
| TGTCCGAAGCTGCTACGATG+AGG | 0.627996 | 1_3:-58721279 | Msa0128890:CDS |
| TACCCTACATGCAGGCGCTG+AGG | 0.629312 | 1_3:-58720854 | Msa0128890:intron |
| TCCGAGGATAACAAACACTT+AGG | 0.629731 | 1_3:-58718548 | Msa0128890:three_prime_UTR |
| AGTAATGCTAAGGAGCACCT+TGG | 0.629892 | 1_3:-58718737 | Msa0128890:CDS |
| TGTCGAATAAGCTCAAATCT+CGG | 0.633642 | 1_3:+58722451 | None:intergenic |
| CTACGATGAGGGAAAGCGTA+CGG | 0.639259 | 1_3:-58721267 | Msa0128890:CDS |
| TGATGCCTAATTCTTGATGG+TGG | 0.639475 | 1_3:-58718621 | Msa0128890:exon |
| GTTTACAAGACGAATGTGGT+GGG | 0.649160 | 1_3:-58722198 | Msa0128890:intron |
| GGAAGTCGGAAACCATTAGT+GGG | 0.652640 | 1_3:+58718681 | None:intergenic |
| TTGCTTATACACTGCCGGTG+TGG | 0.653879 | 1_3:+58722675 | None:intergenic |
| CCGGTGTGGTCTTTGACTCG+CGG | 0.658452 | 1_3:+58722689 | None:intergenic |
| CTTGCTAACAAGTACAAGTG+AGG | 0.669816 | 1_3:-58722130 | Msa0128890:CDS |
| TCTACCTTCCTGGACACTCG+GGG | 0.670383 | 1_3:-58718220 | Msa0128890:three_prime_UTR |
| GTTGAAAATGACCTCTACAC+CGG | 0.674888 | 1_3:+58721211 | None:intergenic |
| GAATGTTTACAAGACGAATG+TGG | 0.675459 | 1_3:-58722202 | Msa0128890:intron |
| TGAACCCCGAGTGTCCAGGA+AGG | 0.680945 | 1_3:+58718216 | None:intergenic |
| GATATAATATGGCAAACAGG+AGG | 0.688147 | 1_3:+58718265 | None:intergenic |
| AGTCGGAAACCATTAGTGGG+AGG | 0.693475 | 1_3:+58718684 | None:intergenic |
| TGTTTACAAGACGAATGTGG+TGG | 0.706029 | 1_3:-58722199 | Msa0128890:intron |
| GACTATGGATTATCACAGAG+GGG | 0.723185 | 1_3:-58721234 | Msa0128890:CDS |
| TTGACTATGGATTATCACAG+AGG | 0.727119 | 1_3:-58721236 | Msa0128890:CDS |
| AGTGTACAGAGATAATACAG+AGG | 0.727131 | 1_3:-58718789 | Msa0128890:CDS |
| CCTCAGAAGGAGACTTACTG+GGG | 0.731723 | 1_3:-58722084 | Msa0128890:CDS |
| CCGCGAGTCAAAGACCACAC+CGG | 0.734448 | 1_3:-58722689 | Msa0128890:CDS |
| CCCGGACGAATGAACCACCG+CGG | 0.764877 | 1_3:+58722645 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCTATCTATATATTTTTT+TGG | - | chr1_3:58722753-58722772 | Msa0128890:CDS | 10.0% |
| !! | TATAGATAGAATTATATAGA+TGG | + | chr1_3:58722745-58722764 | None:intergenic | 15.0% |
| !!! | TATATTTTTTTGGATGTAAT+TGG | - | chr1_3:58722763-58722782 | Msa0128890:CDS | 15.0% |
| !!! | ATATTTTTTTGGATGTAATT+GGG | - | chr1_3:58722764-58722783 | Msa0128890:CDS | 15.0% |
| !! | TCAAATTATTTACCTAGATT+AGG | - | chr1_3:58722942-58722961 | Msa0128890:CDS | 20.0% |
| ! | ATTCAACTTATTTGTGAAGT+TGG | + | chr1_3:58722848-58722867 | None:intergenic | 25.0% |
| ! | CTACAAAACCAGATATAATA+TGG | + | chr1_3:58722887-58722906 | None:intergenic | 25.0% |
| AGTTGGAGCAAAATAGAATA+AGG | + | chr1_3:58722831-58722850 | None:intergenic | 30.0% | |
| ! | AGTTCAGAATTGACTTTCAG+AGG | - | chr1_3:58718198-58718217 | Msa0128890:three_prime_UTR | 35.0% |
| GATATAATATGGCAAACAGG+AGG | + | chr1_3:58722876-58722895 | None:intergenic | 35.0% | |
| CCAGATATAATATGGCAAAC+AGG | + | chr1_3:58722879-58722898 | None:intergenic | 35.0% | |
| CCTGTTTGCCATATTATATC+TGG | - | chr1_3:58722876-58722895 | Msa0128890:CDS | 35.0% | |
| CACCAAAACCAAACAAACCA+TGG | - | chr1_3:58718253-58718272 | Msa0128890:three_prime_UTR | 40.0% | |
| GTATGCTACCTCTACCTTCC+TGG | - | chr1_3:58722908-58722927 | Msa0128890:CDS | 50.0% | |
| AATTTGAACCCCGAGTGTCC+AGG | + | chr1_3:58722929-58722948 | None:intergenic | 50.0% | |
| CCTCTACCTTCCTGGACACT+CGG | - | chr1_3:58722916-58722935 | Msa0128890:CDS | 55.0% | |
| CTCTACCTTCCTGGACACTC+GGG | - | chr1_3:58722917-58722936 | Msa0128890:CDS | 55.0% | |
| TCTACCTTCCTGGACACTCG+GGG | - | chr1_3:58722918-58722937 | Msa0128890:CDS | 55.0% | |
| CCGAGTGTCCAGGAAGGTAG+AGG | + | chr1_3:58722919-58722938 | None:intergenic | 60.0% | |
| TGAACCCCGAGTGTCCAGGA+AGG | + | chr1_3:58722925-58722944 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 58718195 | 58722965 | 58718195 | ID=Msa0128890;Name=Msa0128890 |
| chr1_3 | mRNA | 58718195 | 58722965 | 58718195 | ID=Msa0128890-mRNA-1;Parent=Msa0128890;Name=Msa0128890-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.83|0.71|1|1|1|7|439|430 |
| chr1_3 | exon | 58718195 | 58718846 | 58718195 | ID=Msa0128890-mRNA-1:exon:18963;Parent=Msa0128890-mRNA-1 |
| chr1_3 | exon | 58719487 | 58719579 | 58719487 | ID=Msa0128890-mRNA-1:exon:18962;Parent=Msa0128890-mRNA-1 |
| chr1_3 | exon | 58720788 | 58720862 | 58720788 | ID=Msa0128890-mRNA-1:exon:18961;Parent=Msa0128890-mRNA-1 |
| chr1_3 | exon | 58720976 | 58721059 | 58720976 | ID=Msa0128890-mRNA-1:exon:18960;Parent=Msa0128890-mRNA-1 |
| chr1_3 | exon | 58721223 | 58721302 | 58721223 | ID=Msa0128890-mRNA-1:exon:18959;Parent=Msa0128890-mRNA-1 |
| chr1_3 | exon | 58722067 | 58722211 | 58722067 | ID=Msa0128890-mRNA-1:exon:18958;Parent=Msa0128890-mRNA-1 |
| chr1_3 | exon | 58722363 | 58722965 | 58722363 | ID=Msa0128890-mRNA-1:exon:18957;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58722363 | 58722965 | 58722363 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58722067 | 58722211 | 58722067 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58721223 | 58721302 | 58721223 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58720976 | 58721059 | 58720976 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58720788 | 58720862 | 58720788 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58719487 | 58719579 | 58719487 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | CDS | 58718634 | 58718846 | 58718634 | ID=Msa0128890-mRNA-1:cds;Parent=Msa0128890-mRNA-1 |
| chr1_3 | three_prime_UTR | 58718195 | 58718633 | 58718195 | ID=Msa0128890-mRNA-1:three_prime_utr;Parent=Msa0128890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
