AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0606350


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606350 MtrunA17_Chr4g0035951 95.750 400 15 2 1 398 1 400 0.0 780
Msa0606350 MtrunA17_Chr4g0028361 95.500 400 16 2 1 398 1 400 0.0 778
Msa0606350 MtrunA17_Chr1g0208981 83.146 356 59 1 43 398 37 391 0.0 617
Msa0606350 MtrunA17_Chr4g0035981 96.203 237 9 0 162 398 4 240 4.09e-170 475
Msa0606350 MtrunA17_Chr7g0265821 56.250 352 149 4 51 398 8 358 4.54e-135 390
Msa0606350 MtrunA17_Chr5g0429051 56.534 352 148 4 51 398 8 358 2.02e-134 389
Msa0606350 MtrunA17_Chr5g0447091 56.091 353 151 3 49 398 6 357 4.72e-133 385
Msa0606350 MtrunA17_Chr1g0179211 54.545 352 155 4 51 398 8 358 1.58e-128 374
Msa0606350 MtrunA17_Chr4g0035971 95.652 138 6 0 1 138 1 138 9.42e-89 264
Msa0606350 MtrunA17_Chr5g0429031 53.782 238 109 1 15 251 13 250 4.68e-79 244
Msa0606350 MtrunA17_Chr5g0429021 52.273 132 59 3 270 398 1 131 1.72e-36 129
Msa0606350 MtrunA17_Chr7g0265811 46.809 94 26 1 155 248 21 90 2.27e-20 85.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0606350 AT2G21330.1 83.582 402 59 5 1 398 1 399 0.0 683
Msa0606350 AT4G38970.1 82.915 398 64 3 4 398 2 398 0.0 673
Msa0606350 AT2G21330.3 81.095 402 59 6 1 398 1 389 0.0 655
Msa0606350 AT2G01140.1 75.949 395 90 2 4 398 2 391 0.0 619
Msa0606350 AT2G21330.2 83.548 310 44 5 1 306 1 307 0.0 521
Msa0606350 AT4G38970.2 78.638 323 58 4 4 316 2 323 0.0 511
Msa0606350 AT4G26530.1 57.062 354 147 4 49 398 6 358 7.40e-137 395
Msa0606350 AT4G26530.3 57.062 354 147 4 49 398 6 358 7.40e-137 395
Msa0606350 AT4G26530.2 57.062 354 147 4 49 398 6 358 7.40e-137 395
Msa0606350 AT2G36460.1 56.534 352 148 4 51 398 8 358 1.77e-134 389
Msa0606350 AT3G52930.1 55.398 352 152 4 51 398 8 358 5.52e-132 383
Msa0606350 AT5G03690.2 55.398 352 153 3 51 398 8 359 4.41e-129 375
Msa0606350 AT4G26520.1 55.398 352 152 4 51 398 8 358 5.32e-127 370
Msa0606350 AT4G26520.3 55.556 351 151 4 51 397 8 357 1.34e-126 369
Msa0606350 AT4G26520.2 55.271 351 152 4 52 398 6 355 2.69e-126 369
Msa0606350 AT4G26520.4 55.271 351 152 4 52 398 6 355 2.69e-126 369
Msa0606350 AT5G03690.1 55.301 349 152 3 54 398 45 393 3.85e-126 369
Msa0606350 AT2G36460.3 55.970 268 113 4 135 398 1 267 3.60e-98 293
Msa0606350 AT2G36460.2 55.970 268 113 4 135 398 1 267 3.60e-98 293
Msa0606350 AT5G03690.3 54.307 267 118 3 136 398 1 267 1.48e-91 276
Msa0606350 AT5G03690.4 54.307 267 118 3 136 398 1 267 1.48e-91 276

Find 150 sgRNAs with CRISPR-Local

Find 217 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTTTATGTTCTATCATTT+TGG 0.179738 4_2:-52570514 None:intergenic
TTTGACAAACAATTCCTTCT+TGG 0.220264 4_2:-52570266 None:intergenic
TTCTGCATTGCTGGTTTAAA+TGG 0.221504 4_2:-52567512 None:intergenic
GTCACCAGGTCGTGGTATTT+TGG 0.250260 4_2:+52568602 Msa0606350:CDS
TAGGGTTTGGTGCCCCTTGC+TGG 0.266781 4_2:+52569016 Msa0606350:intron
TGCTTGGTATTCTGCATTGC+TGG 0.303849 4_2:-52567521 None:intergenic
GGGAAGCGTTTGGCTTCAAT+TGG 0.313845 4_2:+52568651 Msa0606350:CDS
TTGAAGTAGCGCAAAAGGTT+TGG 0.322759 4_2:+52569673 Msa0606350:CDS
CGTGCCATGGGTTTGGAGAT+TGG 0.341879 4_2:-52570081 None:intergenic
ACCATGATACCAGGGACGGC+TGG 0.342045 4_2:-52569852 None:intergenic
TGAAGTAGCGCAAAAGGTTT+GGG 0.358741 4_2:+52569674 Msa0606350:CDS
AAGATCTCTGGTTCCACAAT+TGG 0.362513 4_2:-52569618 None:intergenic
TGAGGAGAATGCCCTCAAAT+TGG 0.371449 4_2:-52569731 None:intergenic
CTCTGGTGCCATTCTCTTTG+AGG 0.372847 4_2:+52568749 Msa0606350:CDS
TGGCGAAACGAGCACCTTGC+TGG 0.386451 4_2:-52569102 None:intergenic
AACGACACGTGCCATGGGTT+TGG 0.390092 4_2:-52570088 None:intergenic
TGCTACTTGTGGGAAGCGTT+TGG 0.390936 4_2:+52568641 Msa0606350:CDS
TGGGTTTGGAGATTGGTTCA+TGG 0.399088 4_2:-52570074 None:intergenic
ATGTCTTCAAAGCGGTGTTT+TGG 0.400162 4_2:-52570129 None:intergenic
GAGATGGAACTGTCACTAGA+AGG 0.402071 4_2:-52568713 None:intergenic
ATCGAGCAAAACATTGTTCC+TGG 0.402614 4_2:+52568822 Msa0606350:CDS
GCTCTGATAGTGAGACTTGA+TGG 0.402824 4_2:-52567846 None:intergenic
GTATAGTCAGCAACTGTTGC+AGG 0.413690 4_2:-52569801 None:intergenic
GCTAGAGCAGAGGGACCATT+GGG 0.417032 4_2:-52569278 None:intergenic
TTGTCCTTGCACTCAGCTCC+AGG 0.424112 4_2:-52569771 None:intergenic
TCCTTCCATCTGTTGTGGAT+TGG 0.437495 4_2:-52568782 None:intergenic
CTAGTGACAGTTCCATCTCT+TGG 0.438805 4_2:+52568717 Msa0606350:CDS
CCCAGCCGTCCCTGGTATCA+TGG 0.440253 4_2:+52569851 Msa0606350:CDS
TACAACTTAATAATATCTCT+TGG 0.451646 4_2:+52570450 Msa0606350:three_prime_UTR
GCATAAGTTGTGTGGTAAAG+AGG 0.452795 4_2:+52567654 Msa0606350:five_prime_UTR
TGCTAGAGCAGAGGGACCAT+TGG 0.453095 4_2:-52569279 None:intergenic
AGCGCAAAAGGTTTGGGCTG+AGG 0.461119 4_2:+52569680 Msa0606350:CDS
AAGGTGCTCGTTTCGCCAAA+TGG 0.463790 4_2:+52569107 Msa0606350:CDS
AGTTGGACTTAGCACGGAAA+AGG 0.464478 4_2:-52570195 None:intergenic
GAACCAGAGATCTTACTTGA+TGG 0.464640 4_2:+52569627 Msa0606350:CDS
CAAGGAAGCAGCATGGGGTC+TGG 0.470228 4_2:+52569304 Msa0606350:CDS
AATCTTCCTTCCATCTGTTG+TGG 0.471022 4_2:-52568787 None:intergenic
TCCAACTCAATTGCTCAACT+TGG 0.471150 4_2:+52570211 Msa0606350:CDS
GTTCATGGCATTCAAGTTGA+GGG 0.472908 4_2:-52570059 None:intergenic
TGAGAACAATGTCCAATTTG+AGG 0.474283 4_2:+52569719 Msa0606350:CDS
AATTAATGACGGAAAATGAA+TGG 0.474522 4_2:+52570346 Msa0606350:three_prime_UTR
AGATCTCTGGTTCCACAATT+GGG 0.477855 4_2:-52569617 None:intergenic
TGTTCTTGACAAGTCTGATT+GGG 0.486855 4_2:+52567764 Msa0606350:CDS
AAGCCTAGCATGGTTACTCC+TGG 0.487447 4_2:+52569753 Msa0606350:CDS
TTGGCACCATGACTCATCAT+TGG 0.492416 4_2:-52569041 None:intergenic
GTGAAGTGATGTCTCATTTG+AGG 0.492762 4_2:-52567594 None:intergenic
TCGCTACGCTGCAATTAGTC+AGG 0.494622 4_2:+52569328 Msa0606350:CDS
AGCAGTCAAGGAAGCAGCAT+GGG 0.494676 4_2:+52569298 Msa0606350:CDS
GTGAGACTTGATGGAGCGGC+GGG 0.496907 4_2:-52567837 None:intergenic
AGGCCGCATAGAGAACGTTC+AGG 0.498349 4_2:+52570156 Msa0606350:CDS
CCATGATACCAGGGACGGCT+GGG 0.498457 4_2:-52569851 None:intergenic
TCCACATGTCAAGTGATGAT+AGG 0.498626 4_2:+52567557 Msa0606350:five_prime_UTR
TCTCTTGGAGAGTACATCTC+TGG 0.498855 4_2:+52568732 Msa0606350:CDS
GGAAGCGTTTGGCTTCAATT+GGG 0.502252 4_2:+52568652 Msa0606350:CDS
TTGTTCTTGACAAGTCTGAT+TGG 0.503124 4_2:+52567763 Msa0606350:CDS
CCACGCTTGGCGGTTAACTT+CGG 0.507223 4_2:-52568685 None:intergenic
CTAGAAGGGTACGCCACGCT+TGG 0.507482 4_2:-52568698 None:intergenic
AAGAAGGAATTGTTTGTCAA+AGG 0.507696 4_2:+52570268 Msa0606350:CDS
AAAGAGGTTTATTGTTGTGA+GGG 0.511583 4_2:+52567670 Msa0606350:five_prime_UTR
GCATTGCTGGTTTAAATGGA+TGG 0.512547 4_2:-52567508 None:intergenic
GAGAACAATGTCCAATTTGA+GGG 0.514083 4_2:+52569720 Msa0606350:CDS
CTCATCATTGGAACCAGCAA+GGG 0.517446 4_2:-52569029 None:intergenic
GACAAGTCTGATTGGGTGAA+GGG 0.524135 4_2:+52567771 Msa0606350:CDS
ACCTTGTCAACTTTGATACC+AGG 0.524302 4_2:-52568840 None:intergenic
TAAAGAGGTTTATTGTTGTG+AGG 0.524538 4_2:+52567669 Msa0606350:five_prime_UTR
TTCTCCTGTGAAGGAGCTTG+AGG 0.524713 4_2:-52569824 None:intergenic
CTCTACCAATCCACAACAGA+TGG 0.525359 4_2:+52568777 Msa0606350:CDS
TCTCCATCAAGTAAGATCTC+TGG 0.529631 4_2:-52569630 None:intergenic
GGTTCATGGCATTCAAGTTG+AGG 0.530771 4_2:-52570060 None:intergenic
TATGAGAACGACACGTGCCA+TGG 0.532775 4_2:-52570094 None:intergenic
CATGATACCAGGGACGGCTG+GGG 0.533740 4_2:-52569850 None:intergenic
CAACGGATTGGTCCCAATTG+TGG 0.534112 4_2:+52569605 Msa0606350:CDS
ATACCCTCAAGCTCCTTCAC+AGG 0.534468 4_2:+52569820 Msa0606350:CDS
AAAACACCGCTTTGAAGACA+TGG 0.536857 4_2:+52570131 Msa0606350:CDS
TCTCCTGTGAAGGAGCTTGA+GGG 0.542263 4_2:-52569823 None:intergenic
CAGAAAACAATTGCGTCACC+AGG 0.544188 4_2:+52568588 Msa0606350:intron
GTCAGCAACTGTTGCAGGAG+AGG 0.545139 4_2:-52569796 None:intergenic
TCCTTGACTGCTAGAGCAGA+GGG 0.547409 4_2:-52569287 None:intergenic
ACGCTTCCCACAAGTAGCAT+TGG 0.547732 4_2:-52568637 None:intergenic
GAGAGTCTCCTCAAAGAGAA+TGG 0.550591 4_2:-52568757 None:intergenic
TGAATCTGAGGAAGCCAAGA+AGG 0.552492 4_2:+52570252 Msa0606350:CDS
CACTGGTGAGGGTGAATCTG+AGG 0.554064 4_2:+52570240 Msa0606350:CDS
TGACAAGTCTGATTGGGTGA+AGG 0.558785 4_2:+52567770 Msa0606350:CDS
TCCAAGTTGAGCAATTGAGT+TGG 0.559400 4_2:-52570212 None:intergenic
TCAAGTCTCACTATCAGAGC+TGG 0.559579 4_2:+52567849 Msa0606350:CDS
GCTCCAGGAGTAACCATGCT+AGG 0.561130 4_2:-52569756 None:intergenic
ATCTTACTTGATGGAGAACA+TGG 0.561158 4_2:+52569636 Msa0606350:CDS
GGATGATAACAATGCTTGCT+TGG 0.562542 4_2:-52567537 None:intergenic
TACTCCTGGAGCTGAGTGCA+AGG 0.566360 4_2:+52569767 Msa0606350:CDS
ACCTATCATCACTTGACATG+TGG 0.567903 4_2:-52567558 None:intergenic
GAAGGGTACGCCACGCTTGG+CGG 0.569770 4_2:-52568695 None:intergenic
GGTTTATTAGGACAACGGAT+TGG 0.572758 4_2:+52569593 Msa0606350:intron
TCCCTCTGCTCTAGCAGTCA+AGG 0.573023 4_2:+52569286 Msa0606350:CDS
ATGATACCAGGGACGGCTGG+GGG 0.573444 4_2:-52569849 None:intergenic
TGGAGCTGAGTGCAAGGACA+AGG 0.575340 4_2:+52569773 Msa0606350:CDS
ACAATTGCGTCACCAGGTCG+TGG 0.577031 4_2:+52568594 Msa0606350:CDS
CAATTGAGTTGGACTTAGCA+CGG 0.579344 4_2:-52570201 None:intergenic
TTTGTCTGGTGGACAATCTG+AGG 0.579742 4_2:+52570027 Msa0606350:CDS
GTGTCACATACCATGATACC+AGG 0.579988 4_2:-52569861 None:intergenic
AGTAGCATTGGACTCATCCA+TGG 0.582662 4_2:-52568625 None:intergenic
CGCGGTCTTAACGAGCTCAT+CGG 0.585953 4_2:-52567880 None:intergenic
ACTCATCATTGGAACCAGCA+AGG 0.586276 4_2:-52569030 None:intergenic
ATGAGAACGACACGTGCCAT+GGG 0.588604 4_2:-52570093 None:intergenic
CTGGTTCCAATGATGAGTCA+TGG 0.590508 4_2:+52569035 Msa0606350:CDS
AATGATGAGTCATGGTGCCA+AGG 0.590718 4_2:+52569043 Msa0606350:CDS
CATTCTCCTCAAGCCTAGCA+TGG 0.591042 4_2:+52569743 Msa0606350:CDS
CAGCGGACACAGAAGATTGA+CGG 0.592543 4_2:-52567803 None:intergenic
AGGCAAGACCGTCTAGACCT+TGG 0.593561 4_2:-52569060 None:intergenic
AGATGGAACTGTCACTAGAA+GGG 0.599582 4_2:-52568712 None:intergenic
TCATGGTGCCAAGGTCTAGA+CGG 0.600249 4_2:+52569052 Msa0606350:CDS
GAGATGTACTCTCCAAGAGA+TGG 0.600655 4_2:-52568729 None:intergenic
AAAGAAGTGCATAAGTTGTG+TGG 0.601057 4_2:+52567646 Msa0606350:five_prime_UTR
ATGAGTCCAATGCTACTTGT+GGG 0.603827 4_2:+52568631 Msa0606350:CDS
ATTGGACATTGTTCTCAGCA+AGG 0.604841 4_2:-52569713 None:intergenic
TAGCAGTCAAGGAAGCAGCA+TGG 0.606109 4_2:+52569297 Msa0606350:CDS
TCCTGGTATCAAAGTTGACA+AGG 0.608575 4_2:+52568839 Msa0606350:CDS
TTAATGGTTTATTAGGACAA+CGG 0.610985 4_2:+52569588 Msa0606350:intron
TTCCTTGACTGCTAGAGCAG+AGG 0.615019 4_2:-52569288 None:intergenic
CTTGGAAAGTACACTGGTGA+GGG 0.616339 4_2:+52570229 Msa0606350:CDS
GAAAAGAGATGCTGATGCAG+AGG 0.620632 4_2:-52567730 None:intergenic
GAGTAACCATGCTAGGCTTG+AGG 0.620922 4_2:-52569749 None:intergenic
AGTGAGACTTGATGGAGCGG+CGG 0.624081 4_2:-52567838 None:intergenic
AAACACCGCTTTGAAGACAT+GGG 0.624450 4_2:+52570132 Msa0606350:CDS
GCAGCATCAACAATTAATGA+CGG 0.626376 4_2:+52570335 Msa0606350:three_prime_UTR
ACCAATCCACAACAGATGGA+AGG 0.626896 4_2:+52568781 Msa0606350:CDS
ACTTGGAAAGTACACTGGTG+AGG 0.631708 4_2:+52570228 Msa0606350:CDS
GATGAGTCCAATGCTACTTG+TGG 0.631942 4_2:+52568630 Msa0606350:CDS
ACCGCTTTGAAGACATGGGG+AGG 0.635657 4_2:+52570136 Msa0606350:CDS
ACTGTTGTGAGCATCCCCAA+TGG 0.641479 4_2:+52569263 Msa0606350:CDS
CCGAAGTTAACCGCCAAGCG+TGG 0.645711 4_2:+52568685 Msa0606350:CDS
GTAGTATGCAGCTGAACGAG+AGG 0.646365 4_2:-52569080 None:intergenic
TGAACCAATCTCCAAACCCA+TGG 0.649676 4_2:+52570077 Msa0606350:CDS
GGCGGGGCTGCATCGTACAG+CGG 0.653649 4_2:-52567820 None:intergenic
TCTTGTTAGACAGTAAACAA+TGG 0.656611 4_2:+52567707 Msa0606350:exon
GCTCAACTTGGAAAGTACAC+TGG 0.658104 4_2:+52570223 Msa0606350:CDS
GCCTCCCCATGTCTTCAAAG+CGG 0.661856 4_2:-52570137 None:intergenic
ACATACCATGATACCAGGGA+CGG 0.662310 4_2:-52569856 None:intergenic
TCATCATTGGAACCAGCAAG+GGG 0.668545 4_2:-52569028 None:intergenic
TCAGCTGCATACTACCAGCA+AGG 0.670241 4_2:+52569088 Msa0606350:CDS
ATGGCCAAAATACCACGACC+TGG 0.675188 4_2:-52568606 None:intergenic
GATAGTGAGACTTGATGGAG+CGG 0.675319 4_2:-52567841 None:intergenic
GCAGTCAAGGAAGCAGCATG+GGG 0.684056 4_2:+52569299 Msa0606350:CDS
CGGACACAGAAGATTGACGG+AGG 0.692714 4_2:-52567800 None:intergenic
TGAGACTTGATGGAGCGGCG+GGG 0.708924 4_2:-52567836 None:intergenic
AACACCGCTTTGAAGACATG+GGG 0.711193 4_2:+52570133 Msa0606350:CDS
CTGCCTGAACGTTCTCTATG+CGG 0.711654 4_2:-52570159 None:intergenic
GGACACAGAAGATTGACGGA+GGG 0.715557 4_2:-52567799 None:intergenic
CGATGAGCTCGTTAAGACCG+CGG 0.717465 4_2:+52567881 Msa0606350:CDS
CTAGAGCAGAGGGACCATTG+GGG 0.733948 4_2:-52569277 None:intergenic
TGTCACATACCATGATACCA+GGG 0.737737 4_2:-52569860 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTATAGTTCATTTTTTAAA+CGG + chr4_2:52567474-52567493 Msa0606350:five_prime_UTR 10.0%
!!! TATTTGTTTTTTTATATTGT+TGG + chr4_2:52569181-52569200 Msa0606350:intron 10.0%
!!! TTACATAAATAATTTTATCA+AGG + chr4_2:52569400-52569419 Msa0606350:intron 10.0%
!!! TTAAAAAGTTTGTTTAAAAA+TGG - chr4_2:52570560-52570579 None:intergenic 10.0%
!! GCTAAAATTTATTCATTTAA+TGG + chr4_2:52569572-52569591 Msa0606350:intron 15.0%
!! TATTCATTTAATGGTTTATT+AGG + chr4_2:52569581-52569600 Msa0606350:intron 15.0%
!!! ATGTTAAAAAGAAATCATTT+TGG - chr4_2:52570537-52570556 None:intergenic 15.0%
!! GTAAGTTTAGTTATACTAAT+TGG - chr4_2:52567932-52567951 None:intergenic 20.0%
!!! TTAATTCTTTTTTTGCATAG+TGG + chr4_2:52568003-52568022 Msa0606350:intron 20.0%
!!! TAATTCTTTTTTTGCATAGT+GGG + chr4_2:52568004-52568023 Msa0606350:intron 20.0%
!!! TATATTTTTTCTAGAAAGCA+TGG + chr4_2:52568451-52568470 Msa0606350:intron 20.0%
!!! ATATTTTTTCTAGAAAGCAT+GGG + chr4_2:52568452-52568471 Msa0606350:intron 20.0%
!! AAACATGAACAATGTAAAAT+AGG - chr4_2:52568519-52568538 None:intergenic 20.0%
!!! AAATGAATAAATTTTAGCCA+AGG - chr4_2:52569570-52569589 None:intergenic 20.0%
!! CAAAATACAATATACAACTT+TGG - chr4_2:52569995-52570014 None:intergenic 20.0%
!! TACAACTTAATAATATCTCT+TGG + chr4_2:52570450-52570469 Msa0606350:three_prime_UTR 20.0%
! AAGTTCATCAATAGTATACA+TGG - chr4_2:52568062-52568081 None:intergenic 25.0%
! AAAAAGTAGACTTAAGAAAG+TGG + chr4_2:52568237-52568256 Msa0606350:intron 25.0%
! AAAAGTAGACTTAAGAAAGT+GGG + chr4_2:52568238-52568257 Msa0606350:intron 25.0%
! TGAAATTCTTAAAGCATATG+TGG + chr4_2:52568306-52568325 Msa0606350:intron 25.0%
! ATGGAAAGGGATATTAAAAT+TGG + chr4_2:52568330-52568349 Msa0606350:intron 25.0%
! TTACATTGTTCATGTTTCTT+TGG + chr4_2:52568522-52568541 Msa0606350:intron 25.0%
!!! TATTTTTTGTTACTTGTGTG+TGG + chr4_2:52568562-52568581 Msa0606350:intron 25.0%
! TTACATAGAGTAATTCCAAA+TGG - chr4_2:52568869-52568888 None:intergenic 25.0%
! AATCACTTGTATAATTTGAG+TGG - chr4_2:52569362-52569381 None:intergenic 25.0%
!! ATGAGATTGATTTAAAACCT+TGG + chr4_2:52569550-52569569 Msa0606350:intron 25.0%
! TTAATGGTTTATTAGGACAA+CGG + chr4_2:52569588-52569607 Msa0606350:intron 25.0%
! TGTACAAAGAACAATGTATT+TGG - chr4_2:52569890-52569909 None:intergenic 25.0%
!! TGTTATGTATAGTTTTTGTC+TGG + chr4_2:52570013-52570032 Msa0606350:intron 25.0%
!! AATTAATGACGGAAAATGAA+TGG + chr4_2:52570346-52570365 Msa0606350:three_prime_UTR 25.0%
!!! GTGTAATGTTTTTATAGTCT+TGG + chr4_2:52570395-52570414 Msa0606350:three_prime_UTR 25.0%
!! TGGTTTATGTTCTATCATTT+TGG - chr4_2:52570517-52570536 None:intergenic 25.0%
TAAAGAGGTTTATTGTTGTG+AGG + chr4_2:52567669-52567688 Msa0606350:five_prime_UTR 30.0%
AAAGAGGTTTATTGTTGTGA+GGG + chr4_2:52567670-52567689 Msa0606350:five_prime_UTR 30.0%
TCTTGTTAGACAGTAAACAA+TGG + chr4_2:52567707-52567726 Msa0606350:exon 30.0%
TTAAGTTAAGTATCATACCG+CGG - chr4_2:52567901-52567920 None:intergenic 30.0%
!! TAGTTTTCAAACTAGCTTGT+TGG + chr4_2:52568031-52568050 Msa0606350:intron 30.0%
TTCTGTGACTATGAACAATA+GGG + chr4_2:52568998-52569017 Msa0606350:intron 30.0%
!!! AATTTTGATTTTGCTTCCAC+AGG - chr4_2:52569152-52569171 None:intergenic 30.0%
ATATGTGATTGAAATTCGCA+TGG - chr4_2:52569236-52569255 None:intergenic 30.0%
GCGAATTTCAATCACATATT+AGG + chr4_2:52569237-52569256 Msa0606350:intron 30.0%
CATTAAAAACCTTGATGTTG+CGG - chr4_2:52569456-52569475 None:intergenic 30.0%
! CATCAAGGTTTTTAATGTCT+TGG + chr4_2:52569459-52569478 Msa0606350:intron 30.0%
! TATGTATAGTTTTTGTCTGG+TGG + chr4_2:52570016-52570035 Msa0606350:intron 30.0%
TTTGACAAACAATTCCTTCT+TGG - chr4_2:52570269-52570288 None:intergenic 30.0%
AAGAAGGAATTGTTTGTCAA+AGG + chr4_2:52570268-52570287 Msa0606350:CDS 30.0%
!!! TTGGAGACTATTTTTGTTTG+TGG + chr4_2:52570414-52570433 Msa0606350:three_prime_UTR 30.0%
!! TTCTGCATTGCTGGTTTAAA+TGG - chr4_2:52567515-52567534 None:intergenic 35.0%
! AAAGAAGTGCATAAGTTGTG+TGG + chr4_2:52567646-52567665 Msa0606350:five_prime_UTR 35.0%
TTGTTCTTGACAAGTCTGAT+TGG + chr4_2:52567763-52567782 Msa0606350:CDS 35.0%
TGTTCTTGACAAGTCTGATT+GGG + chr4_2:52567764-52567783 Msa0606350:CDS 35.0%
! ATGCTCTAAGCAGATAAACA+TGG - chr4_2:52568098-52568117 None:intergenic 35.0%
GTTAGGAACAGGTTCTTATT+TGG + chr4_2:52568147-52568166 Msa0606350:intron 35.0%
TGAAATTCAACCATCTCTAG+TGG - chr4_2:52568178-52568197 None:intergenic 35.0%
AGAGATGGTTGAATTTCATG+TGG + chr4_2:52568180-52568199 Msa0606350:intron 35.0%
AAGGAGTTGAAAGTGAGATA+AGG + chr4_2:52568269-52568288 Msa0606350:intron 35.0%
TTCTTAAAGCATATGTGGCA+TGG + chr4_2:52568311-52568330 Msa0606350:intron 35.0%
TGTGCTATGCTGATACAATT+AGG + chr4_2:52568922-52568941 Msa0606350:intron 35.0%
GTTCTGTGACTATGAACAAT+AGG + chr4_2:52568997-52569016 Msa0606350:intron 35.0%
TGACTATGAACAATAGGGTT+TGG + chr4_2:52569003-52569022 Msa0606350:intron 35.0%
TCAAGTAGACACTAACCATT+TGG - chr4_2:52569125-52569144 None:intergenic 35.0%
ATCTTACTTGATGGAGAACA+TGG + chr4_2:52569636-52569655 Msa0606350:CDS 35.0%
!!! AACTTTTGAAGTAGCGCAAA+AGG + chr4_2:52569668-52569687 Msa0606350:CDS 35.0%
TGAGAACAATGTCCAATTTG+AGG + chr4_2:52569719-52569738 Msa0606350:CDS 35.0%
GAGAACAATGTCCAATTTGA+GGG + chr4_2:52569720-52569739 Msa0606350:CDS 35.0%
GCAGCATCAACAATTAATGA+CGG + chr4_2:52570335-52570354 Msa0606350:three_prime_UTR 35.0%
!! GCATTGCTGGTTTAAATGGA+TGG - chr4_2:52567511-52567530 None:intergenic 40.0%
GGATGATAACAATGCTTGCT+TGG - chr4_2:52567540-52567559 None:intergenic 40.0%
TCCACATGTCAAGTGATGAT+AGG + chr4_2:52567557-52567576 Msa0606350:five_prime_UTR 40.0%
ACCTATCATCACTTGACATG+TGG - chr4_2:52567561-52567580 None:intergenic 40.0%
GTGAAGTGATGTCTCATTTG+AGG - chr4_2:52567597-52567616 None:intergenic 40.0%
GCATAAGTTGTGTGGTAAAG+AGG + chr4_2:52567654-52567673 Msa0606350:five_prime_UTR 40.0%
!! CTTGTTGAGCTCTAGAAGTT+AGG + chr4_2:52568130-52568149 Msa0606350:intron 40.0%
!! TTTGGCTTTACCACTAGAGA+TGG + chr4_2:52568165-52568184 Msa0606350:intron 40.0%
AGACTTAAGAAAGTGGGTGA+AGG + chr4_2:52568244-52568263 Msa0606350:intron 40.0%
AAGAAAGTGGGTGAAGGAAA+AGG + chr4_2:52568250-52568269 Msa0606350:intron 40.0%
AAAGCATATGTGGCATGGAA+AGG + chr4_2:52568316-52568335 Msa0606350:intron 40.0%
AAGCATATGTGGCATGGAAA+GGG + chr4_2:52568317-52568336 Msa0606350:intron 40.0%
! ATGAGTCCAATGCTACTTGT+GGG + chr4_2:52568631-52568650 Msa0606350:CDS 40.0%
AGATGGAACTGTCACTAGAA+GGG - chr4_2:52568715-52568734 None:intergenic 40.0%
AATCTTCCTTCCATCTGTTG+TGG - chr4_2:52568790-52568809 None:intergenic 40.0%
ATCGAGCAAAACATTGTTCC+TGG + chr4_2:52568822-52568841 Msa0606350:CDS 40.0%
TCCTGGTATCAAAGTTGACA+AGG + chr4_2:52568839-52568858 Msa0606350:CDS 40.0%
ACCTTGTCAACTTTGATACC+AGG - chr4_2:52568843-52568862 None:intergenic 40.0%
AGTTGACAAGGTATGCCATT+TGG + chr4_2:52568851-52568870 Msa0606350:intron 40.0%
!! TTTGATTTTGCTTCCACAGG+AGG - chr4_2:52569149-52569168 None:intergenic 40.0%
TTGATGTTGCGGTTAATGTC+GGG - chr4_2:52569445-52569464 None:intergenic 40.0%
CTTGATGTTGCGGTTAATGT+CGG - chr4_2:52569446-52569465 None:intergenic 40.0%
GGTTTATTAGGACAACGGAT+TGG + chr4_2:52569593-52569612 Msa0606350:intron 40.0%
! AGATCTCTGGTTCCACAATT+GGG - chr4_2:52569620-52569639 None:intergenic 40.0%
! AAGATCTCTGGTTCCACAAT+TGG - chr4_2:52569621-52569640 None:intergenic 40.0%
GAACCAGAGATCTTACTTGA+TGG + chr4_2:52569627-52569646 Msa0606350:CDS 40.0%
TCTCCATCAAGTAAGATCTC+TGG - chr4_2:52569633-52569652 None:intergenic 40.0%
TTGAAGTAGCGCAAAAGGTT+TGG + chr4_2:52569673-52569692 Msa0606350:CDS 40.0%
TGAAGTAGCGCAAAAGGTTT+GGG + chr4_2:52569674-52569693 Msa0606350:CDS 40.0%
ATTGGACATTGTTCTCAGCA+AGG - chr4_2:52569716-52569735 None:intergenic 40.0%
TGTCACATACCATGATACCA+GGG - chr4_2:52569863-52569882 None:intergenic 40.0%
!! GTTCATGGCATTCAAGTTGA+GGG - chr4_2:52570062-52570081 None:intergenic 40.0%
! ATGTCTTCAAAGCGGTGTTT+TGG - chr4_2:52570132-52570151 None:intergenic 40.0%
!! AAAACACCGCTTTGAAGACA+TGG + chr4_2:52570131-52570150 Msa0606350:CDS 40.0%
!! AAACACCGCTTTGAAGACAT+GGG + chr4_2:52570132-52570151 Msa0606350:CDS 40.0%
!! CAATTGAGTTGGACTTAGCA+CGG - chr4_2:52570204-52570223 None:intergenic 40.0%
TCCAACTCAATTGCTCAACT+TGG + chr4_2:52570211-52570230 Msa0606350:CDS 40.0%
! TCCAAGTTGAGCAATTGAGT+TGG - chr4_2:52570215-52570234 None:intergenic 40.0%
TGCTTGGTATTCTGCATTGC+TGG - chr4_2:52567524-52567543 None:intergenic 45.0%
GAAAAGAGATGCTGATGCAG+AGG - chr4_2:52567733-52567752 None:intergenic 45.0%
TGACAAGTCTGATTGGGTGA+AGG + chr4_2:52567770-52567789 Msa0606350:CDS 45.0%
GACAAGTCTGATTGGGTGAA+GGG + chr4_2:52567771-52567790 Msa0606350:CDS 45.0%
GATAGTGAGACTTGATGGAG+CGG - chr4_2:52567844-52567863 None:intergenic 45.0%
! GCTCTGATAGTGAGACTTGA+TGG - chr4_2:52567849-52567868 None:intergenic 45.0%
TCAAGTCTCACTATCAGAGC+TGG + chr4_2:52567849-52567868 Msa0606350:CDS 45.0%
!! GAGCTCTAGAAGTTAGGAAC+AGG + chr4_2:52568136-52568155 Msa0606350:intron 45.0%
CAGAAAACAATTGCGTCACC+AGG + chr4_2:52568588-52568607 Msa0606350:intron 45.0%
! AGTAGCATTGGACTCATCCA+TGG - chr4_2:52568628-52568647 None:intergenic 45.0%
! GATGAGTCCAATGCTACTTG+TGG + chr4_2:52568630-52568649 Msa0606350:CDS 45.0%
!! GGAAGCGTTTGGCTTCAATT+GGG + chr4_2:52568652-52568671 Msa0606350:CDS 45.0%
GAGATGGAACTGTCACTAGA+AGG - chr4_2:52568716-52568735 None:intergenic 45.0%
CTAGTGACAGTTCCATCTCT+TGG + chr4_2:52568717-52568736 Msa0606350:CDS 45.0%
GAGATGTACTCTCCAAGAGA+TGG - chr4_2:52568732-52568751 None:intergenic 45.0%
! TCTCTTGGAGAGTACATCTC+TGG + chr4_2:52568732-52568751 Msa0606350:CDS 45.0%
GAGAGTCTCCTCAAAGAGAA+TGG - chr4_2:52568760-52568779 None:intergenic 45.0%
CTCTACCAATCCACAACAGA+TGG + chr4_2:52568777-52568796 Msa0606350:CDS 45.0%
ACCAATCCACAACAGATGGA+AGG + chr4_2:52568781-52568800 Msa0606350:CDS 45.0%
TCCTTCCATCTGTTGTGGAT+TGG - chr4_2:52568785-52568804 None:intergenic 45.0%
TCATCATTGGAACCAGCAAG+GGG - chr4_2:52569031-52569050 None:intergenic 45.0%
CTCATCATTGGAACCAGCAA+GGG - chr4_2:52569032-52569051 None:intergenic 45.0%
ACTCATCATTGGAACCAGCA+AGG - chr4_2:52569033-52569052 None:intergenic 45.0%
CTGGTTCCAATGATGAGTCA+TGG + chr4_2:52569035-52569054 Msa0606350:CDS 45.0%
TTGGCACCATGACTCATCAT+TGG - chr4_2:52569044-52569063 None:intergenic 45.0%
! AATGATGAGTCATGGTGCCA+AGG + chr4_2:52569043-52569062 Msa0606350:CDS 45.0%
CGACATTAACCGCAACATCA+AGG + chr4_2:52569444-52569463 Msa0606350:intron 45.0%
TGAGGAGAATGCCCTCAAAT+TGG - chr4_2:52569734-52569753 None:intergenic 45.0%
GTATAGTCAGCAACTGTTGC+AGG - chr4_2:52569804-52569823 None:intergenic 45.0%
ACATACCATGATACCAGGGA+CGG - chr4_2:52569859-52569878 None:intergenic 45.0%
GTGTCACATACCATGATACC+AGG - chr4_2:52569864-52569883 None:intergenic 45.0%
GAACGTGTTAGTATCGTGTC+TGG - chr4_2:52569963-52569982 None:intergenic 45.0%
! TTTGTCTGGTGGACAATCTG+AGG + chr4_2:52570027-52570046 Msa0606350:CDS 45.0%
!! GGTTCATGGCATTCAAGTTG+AGG - chr4_2:52570063-52570082 None:intergenic 45.0%
! TGGGTTTGGAGATTGGTTCA+TGG - chr4_2:52570077-52570096 None:intergenic 45.0%
TGAACCAATCTCCAAACCCA+TGG + chr4_2:52570077-52570096 Msa0606350:CDS 45.0%
!! AACACCGCTTTGAAGACATG+GGG + chr4_2:52570133-52570152 Msa0606350:CDS 45.0%
AGTTGGACTTAGCACGGAAA+AGG - chr4_2:52570198-52570217 None:intergenic 45.0%
! GCTCAACTTGGAAAGTACAC+TGG + chr4_2:52570223-52570242 Msa0606350:CDS 45.0%
! ACTTGGAAAGTACACTGGTG+AGG + chr4_2:52570228-52570247 Msa0606350:CDS 45.0%
! CTTGGAAAGTACACTGGTGA+GGG + chr4_2:52570229-52570248 Msa0606350:CDS 45.0%
TGAATCTGAGGAAGCCAAGA+AGG + chr4_2:52570252-52570271 Msa0606350:CDS 45.0%
GGACACAGAAGATTGACGGA+GGG - chr4_2:52567802-52567821 None:intergenic 50.0%
CAGCGGACACAGAAGATTGA+CGG - chr4_2:52567806-52567825 None:intergenic 50.0%
CTGCATCAGCAATGCGAAAG+TGG - chr4_2:52568419-52568438 None:intergenic 50.0%
! GTCACCAGGTCGTGGTATTT+TGG + chr4_2:52568602-52568621 Msa0606350:CDS 50.0%
ATGGCCAAAATACCACGACC+TGG - chr4_2:52568609-52568628 None:intergenic 50.0%
!!! AGGTCGTGGTATTTTGGCCA+TGG + chr4_2:52568608-52568627 Msa0606350:CDS 50.0%
ACGCTTCCCACAAGTAGCAT+TGG - chr4_2:52568640-52568659 None:intergenic 50.0%
!! TGCTACTTGTGGGAAGCGTT+TGG + chr4_2:52568641-52568660 Msa0606350:CDS 50.0%
!! GGGAAGCGTTTGGCTTCAAT+TGG + chr4_2:52568651-52568670 Msa0606350:CDS 50.0%
!! CTCTGGTGCCATTCTCTTTG+AGG + chr4_2:52568749-52568768 Msa0606350:CDS 50.0%
! TCATGGTGCCAAGGTCTAGA+CGG + chr4_2:52569052-52569071 Msa0606350:CDS 50.0%
GTAGTATGCAGCTGAACGAG+AGG - chr4_2:52569083-52569102 None:intergenic 50.0%
TCAGCTGCATACTACCAGCA+AGG + chr4_2:52569088-52569107 Msa0606350:CDS 50.0%
! AAGGTGCTCGTTTCGCCAAA+TGG + chr4_2:52569107-52569126 Msa0606350:CDS 50.0%
GTGTCTACTTGATCCTCCTG+TGG + chr4_2:52569133-52569152 Msa0606350:intron 50.0%
ACTGTTGTGAGCATCCCCAA+TGG + chr4_2:52569263-52569282 Msa0606350:CDS 50.0%
TCCTTGACTGCTAGAGCAGA+GGG - chr4_2:52569290-52569309 None:intergenic 50.0%
TTCCTTGACTGCTAGAGCAG+AGG - chr4_2:52569291-52569310 None:intergenic 50.0%
TAGCAGTCAAGGAAGCAGCA+TGG + chr4_2:52569297-52569316 Msa0606350:CDS 50.0%
AGCAGTCAAGGAAGCAGCAT+GGG + chr4_2:52569298-52569317 Msa0606350:CDS 50.0%
TCGCTACGCTGCAATTAGTC+AGG + chr4_2:52569328-52569347 Msa0606350:CDS 50.0%
!! CAACGGATTGGTCCCAATTG+TGG + chr4_2:52569605-52569624 Msa0606350:CDS 50.0%
CATTCTCCTCAAGCCTAGCA+TGG + chr4_2:52569743-52569762 Msa0606350:CDS 50.0%
GAGTAACCATGCTAGGCTTG+AGG - chr4_2:52569752-52569771 None:intergenic 50.0%
AAGCCTAGCATGGTTACTCC+TGG + chr4_2:52569753-52569772 Msa0606350:CDS 50.0%
ATACCCTCAAGCTCCTTCAC+AGG + chr4_2:52569820-52569839 Msa0606350:CDS 50.0%
TCTCCTGTGAAGGAGCTTGA+GGG - chr4_2:52569826-52569845 None:intergenic 50.0%
TTCTCCTGTGAAGGAGCTTG+AGG - chr4_2:52569827-52569846 None:intergenic 50.0%
ATGAGAACGACACGTGCCAT+GGG - chr4_2:52570096-52570115 None:intergenic 50.0%
TATGAGAACGACACGTGCCA+TGG - chr4_2:52570097-52570116 None:intergenic 50.0%
CTGCCTGAACGTTCTCTATG+CGG - chr4_2:52570162-52570181 None:intergenic 50.0%
CGGACACAGAAGATTGACGG+AGG - chr4_2:52567803-52567822 None:intergenic 55.0%
AGTGAGACTTGATGGAGCGG+CGG - chr4_2:52567841-52567860 None:intergenic 55.0%
CGCGGTCTTAACGAGCTCAT+CGG - chr4_2:52567883-52567902 None:intergenic 55.0%
CGATGAGCTCGTTAAGACCG+CGG + chr4_2:52567881-52567900 Msa0606350:CDS 55.0%
ACAATTGCGTCACCAGGTCG+TGG + chr4_2:52568594-52568613 Msa0606350:CDS 55.0%
CCACGCTTGGCGGTTAACTT+CGG - chr4_2:52568688-52568707 None:intergenic 55.0%
AGGCAAGACCGTCTAGACCT+TGG - chr4_2:52569063-52569082 None:intergenic 55.0%
CTAGAGCAGAGGGACCATTG+GGG - chr4_2:52569280-52569299 None:intergenic 55.0%
GCTAGAGCAGAGGGACCATT+GGG - chr4_2:52569281-52569300 None:intergenic 55.0%
TGCTAGAGCAGAGGGACCAT+TGG - chr4_2:52569282-52569301 None:intergenic 55.0%
TCCCTCTGCTCTAGCAGTCA+AGG + chr4_2:52569286-52569305 Msa0606350:CDS 55.0%
GCAGTCAAGGAAGCAGCATG+GGG + chr4_2:52569299-52569318 Msa0606350:CDS 55.0%
AGCGCAAAAGGTTTGGGCTG+AGG + chr4_2:52569680-52569699 Msa0606350:CDS 55.0%
GCTCCAGGAGTAACCATGCT+AGG - chr4_2:52569759-52569778 None:intergenic 55.0%
TACTCCTGGAGCTGAGTGCA+AGG + chr4_2:52569767-52569786 Msa0606350:CDS 55.0%
TTGTCCTTGCACTCAGCTCC+AGG - chr4_2:52569774-52569793 None:intergenic 55.0%
TGGAGCTGAGTGCAAGGACA+AGG + chr4_2:52569773-52569792 Msa0606350:CDS 55.0%
GTCAGCAACTGTTGCAGGAG+AGG - chr4_2:52569799-52569818 None:intergenic 55.0%
CTGGGGGAATTCTCCTGTGA+AGG - chr4_2:52569836-52569855 None:intergenic 55.0%
CGTGCCATGGGTTTGGAGAT+TGG - chr4_2:52570084-52570103 None:intergenic 55.0%
AACGACACGTGCCATGGGTT+TGG - chr4_2:52570091-52570110 None:intergenic 55.0%
!! ACCGCTTTGAAGACATGGGG+AGG + chr4_2:52570136-52570155 Msa0606350:CDS 55.0%
GCCTCCCCATGTCTTCAAAG+CGG - chr4_2:52570140-52570159 None:intergenic 55.0%
AGGCCGCATAGAGAACGTTC+AGG + chr4_2:52570156-52570175 Msa0606350:CDS 55.0%
CACTGGTGAGGGTGAATCTG+AGG + chr4_2:52570240-52570259 Msa0606350:CDS 55.0%
TGAGACTTGATGGAGCGGCG+GGG - chr4_2:52567839-52567858 None:intergenic 60.0%
GTGAGACTTGATGGAGCGGC+GGG - chr4_2:52567840-52567859 None:intergenic 60.0%
CCGAAGTTAACCGCCAAGCG+TGG + chr4_2:52568685-52568704 Msa0606350:CDS 60.0%
! CTAGAAGGGTACGCCACGCT+TGG - chr4_2:52568701-52568720 None:intergenic 60.0%
!! TAGGGTTTGGTGCCCCTTGC+TGG + chr4_2:52569016-52569035 Msa0606350:intron 60.0%
TGGCGAAACGAGCACCTTGC+TGG - chr4_2:52569105-52569124 None:intergenic 60.0%
CAAGGAAGCAGCATGGGGTC+TGG + chr4_2:52569304-52569323 Msa0606350:CDS 60.0%
ATGATACCAGGGACGGCTGG+GGG - chr4_2:52569852-52569871 None:intergenic 60.0%
CATGATACCAGGGACGGCTG+GGG - chr4_2:52569853-52569872 None:intergenic 60.0%
CCATGATACCAGGGACGGCT+GGG - chr4_2:52569854-52569873 None:intergenic 60.0%
ACCATGATACCAGGGACGGC+TGG - chr4_2:52569855-52569874 None:intergenic 60.0%
! GAAGGGTACGCCACGCTTGG+CGG - chr4_2:52568698-52568717 None:intergenic 65.0%
AGAATTCCCCCAGCCGTCCC+TGG + chr4_2:52569843-52569862 Msa0606350:CDS 65.0%
CCCAGCCGTCCCTGGTATCA+TGG + chr4_2:52569851-52569870 Msa0606350:CDS 65.0%
GGCGGGGCTGCATCGTACAG+CGG - chr4_2:52567823-52567842 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 52567449 52570590 52567449 ID=Msa0606350;Name=Msa0606350
chr4_2 mRNA 52567449 52570590 52567449 ID=Msa0606350-mRNA-1;Parent=Msa0606350;Name=Msa0606350-mRNA-1;_AED=0.02;_eAED=0.02;_QI=277|1|1|1|1|1|6|287|398
chr4_2 exon 52567449 52567902 52567449 ID=Msa0606350-mRNA-1:exon:12881;Parent=Msa0606350-mRNA-1
chr4_2 exon 52568591 52568860 52568591 ID=Msa0606350-mRNA-1:exon:12882;Parent=Msa0606350-mRNA-1
chr4_2 exon 52569019 52569128 52569019 ID=Msa0606350-mRNA-1:exon:12883;Parent=Msa0606350-mRNA-1
chr4_2 exon 52569259 52569349 52569259 ID=Msa0606350-mRNA-1:exon:12884;Parent=Msa0606350-mRNA-1
chr4_2 exon 52569603 52569872 52569603 ID=Msa0606350-mRNA-1:exon:12885;Parent=Msa0606350-mRNA-1
chr4_2 exon 52570025 52570590 52570025 ID=Msa0606350-mRNA-1:exon:12886;Parent=Msa0606350-mRNA-1
chr4_2 five_prime_UTR 52567449 52567725 52567449 ID=Msa0606350-mRNA-1:five_prime_utr;Parent=Msa0606350-mRNA-1
chr4_2 CDS 52567726 52567902 52567726 ID=Msa0606350-mRNA-1:cds;Parent=Msa0606350-mRNA-1
chr4_2 CDS 52568591 52568860 52568591 ID=Msa0606350-mRNA-1:cds;Parent=Msa0606350-mRNA-1
chr4_2 CDS 52569019 52569128 52569019 ID=Msa0606350-mRNA-1:cds;Parent=Msa0606350-mRNA-1
chr4_2 CDS 52569259 52569349 52569259 ID=Msa0606350-mRNA-1:cds;Parent=Msa0606350-mRNA-1
chr4_2 CDS 52569603 52569872 52569603 ID=Msa0606350-mRNA-1:cds;Parent=Msa0606350-mRNA-1
chr4_2 CDS 52570025 52570303 52570025 ID=Msa0606350-mRNA-1:cds;Parent=Msa0606350-mRNA-1
chr4_2 three_prime_UTR 52570304 52570590 52570304 ID=Msa0606350-mRNA-1:three_prime_utr;Parent=Msa0606350-mRNA-1
Gene Sequence

>Msa0606350

ATGGCCTCTGCATCAGCATCTCTTTTCAAGTCGTCGATTGTTCTTGACAAGTCTGATTGGGTGAAGGGACAGACCCTCCGTCAATCTTCTGTGTCCGCTGTACGATGCAGCCCCGCCGCTCCATCAAGTCTCACTATCAGAGCTGGTTCTTATGCCGATGAGCTCGTTAAGACCGCGAAAACAATTGCGTCACCAGGTCGTGGTATTTTGGCCATGGATGAGTCCAATGCTACTTGTGGGAAGCGTTTGGCTTCAATTGGGCTAGAGAACACCGAAGTTAACCGCCAAGCGTGGCGTACCCTTCTAGTGACAGTTCCATCTCTTGGAGAGTACATCTCTGGTGCCATTCTCTTTGAGGAGACTCTCTACCAATCCACAACAGATGGAAGGAAGATTGTTGATGTACTCATCGAGCAAAACATTGTTCCTGGTATCAAAGTTGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTGCCAAGGTCTAGACGGTCTTGCCTCTCGTTCAGCTGCATACTACCAGCAAGGTGCTCGTTTCGCCAAATGGCGTACTGTTGTGAGCATCCCCAATGGTCCCTCTGCTCTAGCAGTCAAGGAAGCAGCATGGGGTCTGGCTCGCTACGCTGCAATTAGTCAGGACAACGGATTGGTCCCAATTGTGGAACCAGAGATCTTACTTGATGGAGAACATGGTATTGACAGAACTTTTGAAGTAGCGCAAAAGGTTTGGGCTGAGGTTTTCTTCTACCTTGCTGAGAACAATGTCCAATTTGAGGGCATTCTCCTCAAGCCTAGCATGGTTACTCCTGGAGCTGAGTGCAAGGACAAGGCCTCTCCTGCAACAGTTGCTGACTATACCCTCAAGCTCCTTCACAGGAGAATTCCCCCAGCCGTCCCTGGTATCATGTTTTTGTCTGGTGGACAATCTGAGGTTGAAGCAACCCTCAACTTGAATGCCATGAACCAATCTCCAAACCCATGGCACGTGTCGTTCTCATATGCAAGAGCTCTCCAAAACACCGCTTTGAAGACATGGGGAGGCCGCATAGAGAACGTTCAGGCAGCACAAGAAGCACTCCTTTTCCGTGCTAAGTCCAACTCAATTGCTCAACTTGGAAAGTACACTGGTGAGGGTGAATCTGAGGAAGCCAAGAAGGAATTGTTTGTCAAAGGATACTCTTATTAA

Protein sequence

>Msa0606350

MASASASLFKSSIVLDKSDWVKGQTLRQSSVSAVRCSPAAPSSLTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPSLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGIDRTFEVAQKVWAEVFFYLAENNVQFEGILLKPSMVTPGAECKDKASPATVADYTLKLLHRRIPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTALKTWGGRIENVQAAQEALLFRAKSNSIAQLGKYTGEGESEEAKKELFVKGYSY*