Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318990 | KEH37081.1 | 97.044 | 406 | 12 | 0 | 61 | 466 | 4 | 409 | 0.0 | 810 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318990 | sp|O81787|PTF2_ARATH | 44.337 | 415 | 203 | 9 | 65 | 466 | 128 | 527 | 4.37e-84 | 271 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015390 | Msa0318990 | 0.805139 | 1.541962e-49 | -8.615850e-47 |
| Msa0026430 | Msa0318990 | 0.809440 | 1.890356e-50 | -8.615850e-47 |
| Msa0026910 | Msa0318990 | 0.802941 | 4.417789e-49 | -8.615850e-47 |
| Msa0031180 | Msa0318990 | 0.808670 | 2.763395e-50 | -8.615850e-47 |
| Msa0036920 | Msa0318990 | 0.809360 | 1.966331e-50 | -8.615850e-47 |
| Msa0037880 | Msa0318990 | 0.812024 | 5.219331e-51 | -8.615850e-47 |
| Msa0040620 | Msa0318990 | 0.827568 | 1.456154e-54 | -8.615850e-47 |
| Msa0043980 | Msa0318990 | 0.812912 | 3.338094e-51 | -8.615850e-47 |
| Msa0051630 | Msa0318990 | 0.809364 | 1.962664e-50 | -8.615850e-47 |
| Msa0051750 | Msa0318990 | 0.815898 | 7.301606e-52 | -8.615850e-47 |
| Msa0068680 | Msa0318990 | 0.804898 | 1.731382e-49 | -8.615850e-47 |
| Msa0078480 | Msa0318990 | 0.808782 | 2.615063e-50 | -8.615850e-47 |
| Msa0079130 | Msa0318990 | 0.804699 | 1.905308e-49 | -8.615850e-47 |
| Msa0086420 | Msa0318990 | 0.812502 | 4.105521e-51 | -8.615850e-47 |
| Msa0089360 | Msa0318990 | 0.818822 | 1.604170e-52 | -8.615850e-47 |
| Msa0097840 | Msa0318990 | 0.801863 | 7.367877e-49 | -8.615850e-47 |
| Msa0099650 | Msa0318990 | 0.804445 | 2.153004e-49 | -8.615850e-47 |
| Msa0100000 | Msa0318990 | 0.821238 | 4.490875e-53 | -8.615850e-47 |
| Msa0104800 | Msa0318990 | 0.821831 | 3.275163e-53 | -8.615850e-47 |
| Msa0109900 | Msa0318990 | 0.808757 | 2.647695e-50 | -8.615850e-47 |
| Msa0113750 | Msa0318990 | 0.816315 | 5.892974e-52 | -8.615850e-47 |
| Msa0114430 | Msa0318990 | 0.801070 | 1.070780e-48 | -8.615850e-47 |
| Msa0116080 | Msa0318990 | 0.806137 | 9.520683e-50 | -8.615850e-47 |
| Msa0120010 | Msa0318990 | -0.804515 | 2.081313e-49 | -8.615850e-47 |
| Msa0120020 | Msa0318990 | -0.804594 | 2.004690e-49 | -8.615850e-47 |
| Msa0120040 | Msa0318990 | -0.801776 | 7.676948e-49 | -8.615850e-47 |
| Msa0130970 | Msa0318990 | 0.802907 | 4.489859e-49 | -8.615850e-47 |
| Msa0138500 | Msa0318990 | 0.828104 | 1.081887e-54 | -8.615850e-47 |
| Msa0138520 | Msa0318990 | 0.822767 | 1.985955e-53 | -8.615850e-47 |
| Msa0151180 | Msa0318990 | 0.814711 | 1.340688e-51 | -8.615850e-47 |
| Msa0157100 | Msa0318990 | 0.803425 | 3.507547e-49 | -8.615850e-47 |
| Msa0159770 | Msa0318990 | 0.806891 | 6.599055e-50 | -8.615850e-47 |
| Msa0166870 | Msa0318990 | 0.807097 | 5.970935e-50 | -8.615850e-47 |
| Msa0170570 | Msa0318990 | 0.837371 | 5.405894e-57 | -8.615850e-47 |
| Msa0171120 | Msa0318990 | 0.809955 | 1.465149e-50 | -8.615850e-47 |
| Msa0178510 | Msa0318990 | 0.803560 | 3.288088e-49 | -8.615850e-47 |
| Msa0183050 | Msa0318990 | 0.810567 | 1.081050e-50 | -8.615850e-47 |
| Msa0186950 | Msa0318990 | 0.800255 | 1.570148e-48 | -8.615850e-47 |
| Msa0188830 | Msa0318990 | 0.800060 | 1.720490e-48 | -8.615850e-47 |
| Msa0200560 | Msa0318990 | 0.807430 | 5.073509e-50 | -8.615850e-47 |
| Msa0206010 | Msa0318990 | 0.815463 | 9.125359e-52 | -8.615850e-47 |
| Msa0207030 | Msa0318990 | 0.810506 | 1.114058e-50 | -8.615850e-47 |
| Msa0212990 | Msa0318990 | 0.805487 | 1.303877e-49 | -8.615850e-47 |
| Msa0213520 | Msa0318990 | 0.807852 | 4.128514e-50 | -8.615850e-47 |
| Msa0218350 | Msa0318990 | 0.804095 | 2.546639e-49 | -8.615850e-47 |
| Msa0240300 | Msa0318990 | 0.822508 | 2.282303e-53 | -8.615850e-47 |
| Msa0241540 | Msa0318990 | 0.817305 | 3.533410e-52 | -8.615850e-47 |
| Msa0243250 | Msa0318990 | 0.808398 | 3.158854e-50 | -8.615850e-47 |
| Msa0245940 | Msa0318990 | 0.820890 | 5.400185e-53 | -8.615850e-47 |
| Msa0249100 | Msa0318990 | 0.806023 | 1.005985e-49 | -8.615850e-47 |
| Msa0264780 | Msa0318990 | 0.800212 | 1.601974e-48 | -8.615850e-47 |
| Msa0270100 | Msa0318990 | 0.814204 | 1.735731e-51 | -8.615850e-47 |
| Msa0279230 | Msa0318990 | 0.875008 | 4.320858e-68 | -8.615850e-47 |
| Msa0281640 | Msa0318990 | 0.817712 | 2.860667e-52 | -8.615850e-47 |
| Msa0284520 | Msa0318990 | 0.808374 | 3.196205e-50 | -8.615850e-47 |
| Msa0285330 | Msa0318990 | 0.810826 | 9.500249e-51 | -8.615850e-47 |
| Msa0286670 | Msa0318990 | 0.804122 | 2.513055e-49 | -8.615850e-47 |
| Msa0287410 | Msa0318990 | 0.827688 | 1.362927e-54 | -8.615850e-47 |
| Msa0287650 | Msa0318990 | 0.800369 | 1.488384e-48 | -8.615850e-47 |
| Msa0291500 | Msa0318990 | 0.812792 | 3.546824e-51 | -8.615850e-47 |
| Msa0299580 | Msa0318990 | 0.805857 | 1.090283e-49 | -8.615850e-47 |
| Msa0318990 | Msa0319170 | 0.821959 | 3.059592e-53 | -8.615850e-47 |
| Msa0318990 | Msa0320800 | 0.804595 | 2.003478e-49 | -8.615850e-47 |
| Msa0318990 | Msa0324240 | 0.801145 | 1.033956e-48 | -8.615850e-47 |
| Msa0318990 | Msa0326110 | 0.826676 | 2.380793e-54 | -8.615850e-47 |
| Msa0318990 | Msa0341540 | 0.806025 | 1.004998e-49 | -8.615850e-47 |
| Msa0318990 | Msa0351810 | 0.815950 | 7.107882e-52 | -8.615850e-47 |
| Msa0318990 | Msa0359030 | 0.802081 | 6.645946e-49 | -8.615850e-47 |
| Msa0318990 | Msa0373450 | 0.802479 | 5.503159e-49 | -8.615850e-47 |
| Msa0318990 | Msa0379640 | 0.807706 | 4.433517e-50 | -8.615850e-47 |
| Msa0318990 | Msa0388950 | 0.804884 | 1.743154e-49 | -8.615850e-47 |
| Msa0318990 | Msa0389910 | 0.807593 | 4.686252e-50 | -8.615850e-47 |
| Msa0318990 | Msa0390960 | 0.811238 | 7.735486e-51 | -8.615850e-47 |
| Msa0318990 | Msa0395790 | 0.805137 | 1.543324e-49 | -8.615850e-47 |
| Msa0318990 | Msa0423520 | 0.804739 | 1.869674e-49 | -8.615850e-47 |
| Msa0318990 | Msa0426900 | 0.823607 | 1.264385e-53 | -8.615850e-47 |
| Msa0318990 | Msa0436370 | 0.806807 | 6.875782e-50 | -8.615850e-47 |
| Msa0318990 | Msa0477130 | -0.802985 | 4.326065e-49 | -8.615850e-47 |
| Msa0318990 | Msa0484780 | 0.842354 | 2.721201e-58 | -8.615850e-47 |
| Msa0318990 | Msa0489660 | 0.802566 | 5.278516e-49 | -8.615850e-47 |
| Msa0318990 | Msa0545070 | 0.806134 | 9.531456e-50 | -8.615850e-47 |
| Msa0318990 | Msa0579130 | 0.813271 | 2.784848e-51 | -8.615850e-47 |
| Msa0318990 | Msa0606750 | 0.825822 | 3.800700e-54 | -8.615850e-47 |
| Msa0318990 | Msa0621600 | 0.813321 | 2.716191e-51 | -8.615850e-47 |
| Msa0318990 | Msa0622650 | 0.802649 | 5.076288e-49 | -8.615850e-47 |
| Msa0318990 | Msa0638070 | 0.816523 | 5.292662e-52 | -8.615850e-47 |
| Msa0318990 | Msa0652450 | 0.804577 | 2.020522e-49 | -8.615850e-47 |
| Msa0318990 | Msa0657750 | 0.828058 | 1.110373e-54 | -8.615850e-47 |
| Msa0318990 | Msa0659400 | 0.806358 | 8.552573e-50 | -8.615850e-47 |
| Msa0318990 | Msa0663240 | 0.807031 | 6.164615e-50 | -8.615850e-47 |
| Msa0318990 | Msa0687840 | 0.812070 | 5.100705e-51 | -8.615850e-47 |
| Msa0318990 | Msa0688070 | 0.802904 | 4.495243e-49 | -8.615850e-47 |
| Msa0318990 | Msa0688480 | 0.817810 | 2.718284e-52 | -8.615850e-47 |
| Msa0318990 | Msa0693380 | 0.815787 | 7.728237e-52 | -8.615850e-47 |
| Msa0318990 | Msa0709160 | 0.810282 | 1.245279e-50 | -8.615850e-47 |
| Msa0318990 | Msa0711100 | 0.808523 | 2.971067e-50 | -8.615850e-47 |
| Msa0318990 | Msa0715470 | 0.825175 | 5.408101e-54 | -8.615850e-47 |
| Msa0318990 | Msa0721280 | 0.835106 | 2.035329e-56 | -8.615850e-47 |
| Msa0318990 | Msa0731180 | 0.802657 | 5.057230e-49 | -8.615850e-47 |
| Msa0318990 | Msa0748730 | 0.826244 | 3.017815e-54 | -8.615850e-47 |
| Msa0318990 | Msa0753720 | 0.801379 | 9.259114e-49 | -8.615850e-47 |
| Msa0318990 | Msa0763890 | 0.801223 | 9.966086e-49 | -8.615850e-47 |
| Msa0318990 | Msa0771580 | 0.800649 | 1.305379e-48 | -8.615850e-47 |
| Msa0318990 | Msa0773590 | 0.823829 | 1.121823e-53 | -8.615850e-47 |
| Msa0318990 | Msa0790510 | 0.809916 | 1.493783e-50 | -8.615850e-47 |
| Msa0318990 | Msa0811040 | 0.810145 | 1.333300e-50 | -8.615850e-47 |
| Msa0318990 | Msa0820770 | 0.803589 | 3.243570e-49 | -8.615850e-47 |
| Msa0318990 | Msa0828850 | 0.813709 | 2.231720e-51 | -8.615850e-47 |
| Msa0318990 | Msa0828920 | 0.826293 | 2.937642e-54 | -8.615850e-47 |
| Msa0318990 | Msa0832150 | 0.815858 | 7.451291e-52 | -8.615850e-47 |
| Msa0318990 | Msa0847880 | 0.816035 | 6.805462e-52 | -8.615850e-47 |
| Msa0318990 | Msa0861090 | 0.801252 | 9.828019e-49 | -8.615850e-47 |
| Msa0318990 | Msa0861930 | 0.801499 | 8.747861e-49 | -8.615850e-47 |
| Msa0318990 | Msa0866400 | 0.819066 | 1.411810e-52 | -8.615850e-47 |
| Msa0318990 | Msa0866410 | 0.830963 | 2.184340e-55 | -8.615850e-47 |
| Msa0318990 | Msa0869100 | 0.814287 | 1.663867e-51 | -8.615850e-47 |
| Msa0318990 | Msa0873860 | 0.800240 | 1.581309e-48 | -8.615850e-47 |
| Msa0318990 | Msa0919470 | 0.826663 | 2.397996e-54 | -8.615850e-47 |
| Msa0318990 | Msa0933230 | 0.810622 | 1.051643e-50 | -8.615850e-47 |
| Msa0318990 | Msa0933310 | 0.831376 | 1.729339e-55 | -8.615850e-47 |
| Msa0318990 | Msa0939000 | 0.801754 | 7.755041e-49 | -8.615850e-47 |
| Msa0318990 | Msa0962840 | 0.823989 | 1.029286e-53 | -8.615850e-47 |
| Msa0318990 | Msa0969520 | 0.817606 | 3.021778e-52 | -8.615850e-47 |
| Msa0318990 | Msa0971090 | 0.833570 | 4.943602e-56 | -8.615850e-47 |
| Msa0318990 | Msa0980880 | 0.801749 | 7.775848e-49 | -8.615850e-47 |
| Msa0318990 | Msa0981310 | 0.810761 | 9.815379e-51 | -8.615850e-47 |
| Msa0318990 | Msa0982240 | 0.813657 | 2.290914e-51 | -8.615850e-47 |
| Msa0318990 | Msa0990580 | 0.802623 | 5.138726e-49 | -8.615850e-47 |
| Msa0318990 | Msa0997970 | 0.805849 | 1.094370e-49 | -8.615850e-47 |
| Msa0318990 | Msa0999100 | 0.821655 | 3.597435e-53 | -8.615850e-47 |
| Msa0318990 | Msa1010350 | 0.815678 | 8.175800e-52 | -8.615850e-47 |
| Msa0318990 | Msa1031770 | 0.810262 | 1.257918e-50 | -8.615850e-47 |
| Msa0318990 | Msa1034150 | 0.813706 | 2.234572e-51 | -8.615850e-47 |
| Msa0318990 | Msa1038810 | 0.802943 | 4.413801e-49 | -8.615850e-47 |
| Msa0318990 | Msa1052830 | 0.807887 | 4.058794e-50 | -8.615850e-47 |
| Msa0318990 | Msa1058750 | 0.801350 | 9.386016e-49 | -8.615850e-47 |
| Msa0318990 | Msa1065610 | 0.814728 | 1.329170e-51 | -8.615850e-47 |
| Msa0318990 | Msa1079430 | 0.803343 | 3.648128e-49 | -8.615850e-47 |
| Msa0318990 | Msa1081590 | 0.801912 | 7.197796e-49 | -8.615850e-47 |
| Msa0318990 | Msa1082500 | 0.820353 | 7.173348e-53 | -8.615850e-47 |
| Msa0318990 | Msa1111180 | 0.821257 | 4.446046e-53 | -8.615850e-47 |
| Msa0318990 | Msa1118110 | 0.800584 | 1.345774e-48 | -8.615850e-47 |
| Msa0318990 | Msa1139890 | 0.803144 | 4.011166e-49 | -8.615850e-47 |
| Msa0318990 | Msa1147970 | 0.831727 | 1.417217e-55 | -8.615850e-47 |
| Msa0318990 | Msa1157740 | 0.812198 | 4.784114e-51 | -8.615850e-47 |
| Msa0318990 | Msa1170800 | 0.806410 | 8.338358e-50 | -8.615850e-47 |
| Msa0318990 | Msa1174040 | 0.814405 | 1.566564e-51 | -8.615850e-47 |
| Msa0318990 | Msa1174850 | 0.820030 | 8.508002e-53 | -8.615850e-47 |
| Msa0318990 | Msa1193290 | 0.826227 | 3.044847e-54 | -8.615850e-47 |
| Msa0318990 | Msa1201120 | 0.806703 | 7.233442e-50 | -8.615850e-47 |
| Msa0318990 | Msa1207350 | 0.808950 | 2.407079e-50 | -8.615850e-47 |
| Msa0318990 | Msa1215920 | 0.824786 | 6.682551e-54 | -8.615850e-47 |
| Msa0318990 | Msa1224480 | 0.807229 | 5.597992e-50 | -8.615850e-47 |
| Msa0318990 | Msa1250530 | 0.810452 | 1.144472e-50 | -8.615850e-47 |
| Msa0318990 | Msa1250730 | 0.803377 | 3.589695e-49 | -8.615850e-47 |
| Msa0318990 | Msa1276440 | 0.817485 | 3.218058e-52 | -8.615850e-47 |
| Msa0318990 | Msa1297290 | 0.815997 | 6.937601e-52 | -8.615850e-47 |
| Msa0318990 | Msa1313140 | 0.807366 | 5.235118e-50 | -8.615850e-47 |
| Msa0318990 | Msa1314340 | 0.822740 | 2.014762e-53 | -8.615850e-47 |
| Msa0318990 | Msa1320620 | 0.807647 | 4.563773e-50 | -8.615850e-47 |
| Msa0318990 | Msa1329700 | 0.807835 | 4.163533e-50 | -8.615850e-47 |
| Msa0318990 | Msa1331320 | 0.800612 | 1.328377e-48 | -8.615850e-47 |
| Msa0318990 | Msa1333730 | 0.807818 | 4.196845e-50 | -8.615850e-47 |
| Msa0318990 | Msa1341490 | 0.801511 | 8.698586e-49 | -8.615850e-47 |
| Msa0318990 | Msa1341950 | 0.808494 | 3.013716e-50 | -8.615850e-47 |
| Msa0318990 | Msa1348880 | 0.806297 | 8.808223e-50 | -8.615850e-47 |
| Msa0318990 | Msa1351550 | 0.806638 | 7.464082e-50 | -8.615850e-47 |
| Msa0318990 | Msa1353470 | 0.838854 | 2.245542e-57 | -8.615850e-47 |
| Msa0318990 | Msa1357890 | 0.832962 | 7.005082e-56 | -8.615850e-47 |
| Msa0318990 | Msa1378940 | 0.802675 | 5.013956e-49 | -8.615850e-47 |
| Msa0318990 | Msa1379850 | 0.808281 | 3.345880e-50 | -8.615850e-47 |
| Msa0318990 | Msa1385000 | 0.816443 | 5.514733e-52 | -8.615850e-47 |
| Msa0318990 | Msa1392260 | 0.806056 | 9.899994e-50 | -8.615850e-47 |
| Msa0318990 | Msa1393040 | 0.801335 | 9.453150e-49 | -8.615850e-47 |
| Msa0318990 | Msa1398090 | 0.826078 | 3.304092e-54 | -8.615850e-47 |
| Msa0318990 | Msa1407580 | 0.812734 | 3.653184e-51 | -8.615850e-47 |
| Msa0318990 | Msa1411020 | 0.836461 | 9.232795e-57 | -8.615850e-47 |
| Msa0318990 | Msa1420140 | 0.816250 | 6.091544e-52 | -8.615850e-47 |
| Msa0318990 | Msa1420490 | 0.827468 | 1.538679e-54 | -8.615850e-47 |
| Msa0318990 | Msa1423390 | 0.826696 | 2.354569e-54 | -8.615850e-47 |
| Msa0318990 | Msa1423870 | 0.806280 | 8.880980e-50 | -8.615850e-47 |
| Msa0318990 | Msa1424290 | 0.827821 | 1.266040e-54 | -8.615850e-47 |
| Msa0318990 | Msa1425100 | 0.800546 | 1.369967e-48 | -8.615850e-47 |
| Msa0318990 | Msa1427230 | 0.804628 | 1.971946e-49 | -8.615850e-47 |
| Msa0318990 | Msa1429900 | 0.800031 | 1.743978e-48 | -8.615850e-47 |
| Msa0318990 | Msa1434350 | 0.831101 | 2.020159e-55 | -8.615850e-47 |
| Msa0318990 | Msa1435270 | 0.813734 | 2.203395e-51 | -8.615850e-47 |
| Msa0318990 | Msa1439320 | 0.835425 | 1.690285e-56 | -8.615850e-47 |
| Msa0318990 | Msa1440370 | 0.827002 | 1.989660e-54 | -8.615850e-47 |
| Msa0318990 | Msa1440810 | 0.824799 | 6.637003e-54 | -8.615850e-47 |
| Msa0318990 | Msa1447150 | 0.807313 | 5.372146e-50 | -8.615850e-47 |
| Msa0318990 | Msa1449520 | 0.800702 | 1.272982e-48 | -8.615850e-47 |
| Msa0318990 | Msa1453560 | 0.806108 | 9.655316e-50 | -8.615850e-47 |
| Msa0318990 | Msa1457430 | 0.807386 | 5.185127e-50 | -8.615850e-47 |
| Msa0318990 | Msa1458610 | 0.801522 | 8.653189e-49 | -8.615850e-47 |
| Msa0318990 | Msa1460830 | 0.800874 | 1.174132e-48 | -8.615850e-47 |
| Msa0318990 | Msa1466730 | 0.850177 | 2.009963e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318990 | MtrunA17_Chr2g0292981 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 3.76e-38 | 133 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0318990 | AT4G35540.1 | 44.337 | 415 | 203 | 9 | 65 | 466 | 128 | 527 | 4.44e-85 | 271 |
| Msa0318990 | AT4G35540.1 | 44.444 | 54 | 30 | 0 | 6 | 59 | 2 | 55 | 7.21e-11 | 64.7 |
Find 115 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTAGGGTTGTTGATTATT+TGG | 0.150898 | 2_4:+18209916 | Msa0318990:CDS |
| ACCTTTGGTGGTTGCGGTTT+TGG | 0.191198 | 2_4:+18210117 | Msa0318990:CDS |
| CGAGAAGTTGACATTGGATT+TGG | 0.222381 | 2_4:-18209455 | None:intergenic |
| AGCTTGGGAAGATGGTTATT+AGG | 0.244616 | 2_4:+18209900 | Msa0318990:CDS |
| TGATATTCGGTTGGAGGATT+TGG | 0.263600 | 2_4:+18210165 | Msa0318990:CDS |
| TAGGGAGGTTGATAGGAGTT+TGG | 0.285403 | 2_4:+18210015 | Msa0318990:CDS |
| GATTTAATAGAGAAGGATAT+TGG | 0.309330 | 2_4:+18210715 | Msa0318990:CDS |
| GAGAAGTTGACATTGGATTT+GGG | 0.330949 | 2_4:-18209454 | None:intergenic |
| GCTTGGGAAGATGGTTATTA+GGG | 0.333982 | 2_4:+18209901 | Msa0318990:CDS |
| CATCCATTACATGCTGATCT+TGG | 0.348193 | 2_4:+18210838 | Msa0318990:CDS |
| CAGGAGGGGCAATATGAGTA+TGG | 0.351574 | 2_4:+18210433 | Msa0318990:CDS |
| TGATCAGACTGGGTTGGATT+TGG | 0.359898 | 2_4:+18210384 | Msa0318990:CDS |
| ATCCATTACATGCTGATCTT+GGG | 0.370201 | 2_4:+18210839 | Msa0318990:CDS |
| GCCTTTACCTTTGGTGGTTG+CGG | 0.373331 | 2_4:+18210111 | Msa0318990:CDS |
| CAATATGAGTATGGGGTTGA+TGG | 0.373951 | 2_4:+18210442 | Msa0318990:CDS |
| AGATTAATGGAGTTGATATT+CGG | 0.376635 | 2_4:+18210152 | Msa0318990:CDS |
| CACATCGGAACCTCCGGTTC+AGG | 0.393270 | 2_4:+18209623 | Msa0318990:CDS |
| ACATCCTTCCTCTTCTCAAC+AGG | 0.394246 | 2_4:-18210361 | None:intergenic |
| GCCGTTTGTGATTCAGTATA+TGG | 0.395048 | 2_4:+18210318 | Msa0318990:CDS |
| GGGGCGTAGGCCTTTACCTT+TGG | 0.395648 | 2_4:+18210102 | Msa0318990:CDS |
| TACATCAGAGACAAACATTC+AGG | 0.407335 | 2_4:-18210556 | None:intergenic |
| AAATGCACAATATCAAAATC+TGG | 0.409859 | 2_4:-18209959 | None:intergenic |
| GCGTAGGCCTTTACCTTTGG+TGG | 0.419286 | 2_4:+18210105 | Msa0318990:CDS |
| TTCACCCGCGACGACGAAAC+CGG | 0.421147 | 2_4:+18209506 | Msa0318990:CDS |
| TCTTCTGTTCTTCTTTCTCT+CGG | 0.422902 | 2_4:-18210899 | None:intergenic |
| TATAAATTATTTGTTGTGAA+TGG | 0.425568 | 2_4:-18209408 | None:intergenic |
| TTGTTGAAAAGGAGTGTTGA+TGG | 0.439457 | 2_4:+18209980 | Msa0318990:CDS |
| ATCGTGATGCTATGTCTTCA+AGG | 0.440117 | 2_4:+18210599 | Msa0318990:CDS |
| GGGCATTACAATACCTTACT+AGG | 0.441637 | 2_4:+18211009 | Msa0318990:CDS |
| TGTTGCGCAAGTGTTGCCTT+GGG | 0.457664 | 2_4:+18210258 | Msa0318990:CDS |
| TGGAGTTGATATTCGGTTGG+AGG | 0.458813 | 2_4:+18210159 | Msa0318990:CDS |
| GTCTGTTGATGGTATTGATT+GGG | 0.462296 | 2_4:+18210927 | Msa0318990:CDS |
| AGGAAGGATGTTGATCAGAC+TGG | 0.469196 | 2_4:+18210373 | Msa0318990:CDS |
| TTCGTTCACATCGGAACCTC+CGG | 0.475672 | 2_4:+18209617 | Msa0318990:CDS |
| AGAGTAGATAGTACCTGAAC+CGG | 0.475919 | 2_4:-18209636 | None:intergenic |
| GGGCTGTTCTGCGCCGCATG+AGG | 0.477078 | 2_4:-18209543 | None:intergenic |
| TTCGTCGTCGCGGGTGAATG+AGG | 0.477355 | 2_4:-18209501 | None:intergenic |
| CTTGGGGATACTGCAAATCT+TGG | 0.477564 | 2_4:+18210856 | Msa0318990:CDS |
| AGAAGAGGAATGTCTGTTGA+TGG | 0.480043 | 2_4:+18210916 | Msa0318990:CDS |
| CGCCAGAGTTAAACACATAT+AGG | 0.481048 | 2_4:-18211032 | None:intergenic |
| TTGTTTCGACTTGTAGAACT+AGG | 0.483197 | 2_4:+18210206 | Msa0318990:CDS |
| TGTCTGTTGATGGTATTGAT+TGG | 0.487077 | 2_4:+18210926 | Msa0318990:CDS |
| AAGGATGAGGAAATTGAGAA+AGG | 0.488481 | 2_4:+18210988 | Msa0318990:CDS |
| GTTGATTATTTGGATTTGAG+AGG | 0.498670 | 2_4:+18209926 | Msa0318990:CDS |
| CAATTGACCATTGACAAATG+AGG | 0.499040 | 2_4:-18210755 | None:intergenic |
| TGGGTTGGATTTGGCTGATG+TGG | 0.502402 | 2_4:+18210393 | Msa0318990:CDS |
| ATGTTGCGCAAGTGTTGCCT+TGG | 0.503658 | 2_4:+18210257 | Msa0318990:CDS |
| AATTGACCATTGACAAATGA+GGG | 0.504917 | 2_4:-18210754 | None:intergenic |
| ATATTGTGCATTTGTTGAAA+AGG | 0.505084 | 2_4:+18209969 | Msa0318990:CDS |
| TAATGGAGTTGATATTCGGT+TGG | 0.505545 | 2_4:+18210156 | Msa0318990:CDS |
| TCCCCAAGATCAGCATGTAA+TGG | 0.508917 | 2_4:-18210841 | None:intergenic |
| ACTGAAAGATTTAATAGAGA+AGG | 0.510387 | 2_4:+18210708 | Msa0318990:CDS |
| TCCATATACTGAATCACAAA+CGG | 0.516426 | 2_4:-18210319 | None:intergenic |
| CAAATGTTCAGAAACGGAAA+AGG | 0.524266 | 2_4:+18210626 | Msa0318990:CDS |
| ACCGCAACCACCAAAGGTAA+AGG | 0.525542 | 2_4:-18210112 | None:intergenic |
| AAACACATATAGGCCTAGTA+AGG | 0.525978 | 2_4:-18211022 | None:intergenic |
| GGATGTTGATCAGACTGGGT+TGG | 0.526107 | 2_4:+18210378 | Msa0318990:CDS |
| TTGTGGACCGTTGATTCCGA+TGG | 0.532490 | 2_4:-18209588 | None:intergenic |
| TTGATTATTTGGATTTGAGA+GGG | 0.532546 | 2_4:+18209927 | Msa0318990:CDS |
| AGGATGAGGAAATTGAGAAA+GGG | 0.534335 | 2_4:+18210989 | Msa0318990:CDS |
| TGTTCAGAAACGGAAAAGGT+TGG | 0.536629 | 2_4:+18210630 | Msa0318990:CDS |
| GTCAATTGAAATGTAAAATG+AGG | 0.539663 | 2_4:+18210770 | Msa0318990:CDS |
| ACTTGTTCTTCATCAAGTAA+AGG | 0.541741 | 2_4:+18210969 | Msa0318990:CDS |
| GGCCTATATGTGTTTAACTC+TGG | 0.542099 | 2_4:+18211030 | Msa0318990:CDS |
| ACCAAAACCGCAACCACCAA+AGG | 0.546298 | 2_4:-18210118 | None:intergenic |
| ATGCCACCCTCATTTGTCAA+TGG | 0.547561 | 2_4:+18210748 | Msa0318990:CDS |
| TCCATTACATGCTGATCTTG+GGG | 0.550027 | 2_4:+18210840 | Msa0318990:CDS |
| GGAGTGCAAATGTTCAGAAA+CGG | 0.550767 | 2_4:+18210620 | Msa0318990:CDS |
| GTTGGAGGATTTGGCGAAGG+AGG | 0.555166 | 2_4:+18210174 | Msa0318990:CDS |
| GTTGATAGAATGAAGAAACA+AGG | 0.555439 | 2_4:+18210037 | Msa0318990:CDS |
| CAAAGTAATGGTGATAGAGA+AGG | 0.556116 | 2_4:+18210502 | Msa0318990:CDS |
| GGAGTGGTGGAATGAAGAAT+CGG | 0.557731 | 2_4:+18210666 | Msa0318990:CDS |
| TGGTGATAGAGAAGGTATTG+TGG | 0.557817 | 2_4:+18210510 | Msa0318990:CDS |
| ACCGCCGGTTTCGTCGTCGC+GGG | 0.558652 | 2_4:-18209510 | None:intergenic |
| AGGAGGGGCAATATGAGTAT+GGG | 0.559945 | 2_4:+18210434 | Msa0318990:CDS |
| AACCGCCGGTTTCGTCGTCG+CGG | 0.561590 | 2_4:-18209511 | None:intergenic |
| CAGCGACGAGAAGTTGACAT+TGG | 0.563031 | 2_4:-18209461 | None:intergenic |
| GAGAGAAAGAAGAACAGAAG+AGG | 0.568918 | 2_4:+18210901 | Msa0318990:CDS |
| TCTTCATCAAGTAAAGGATG+AGG | 0.569871 | 2_4:+18210975 | Msa0318990:CDS |
| ATGGTGAATAGTTAGATTTG+AGG | 0.571258 | 2_4:-18209389 | None:intergenic |
| ATGAAAGTGTTGAGAAAAGT+CGG | 0.578244 | 2_4:-18209335 | None:intergenic |
| ATTGACAAATGAGGGTGGCA+TGG | 0.583819 | 2_4:-18210746 | None:intergenic |
| GTAAGTTTCGAATTGATCGA+AGG | 0.585342 | 2_4:-18209564 | None:intergenic |
| AATGAAGTTGCGAATGCGGT+TGG | 0.585805 | 2_4:+18209863 | Msa0318990:CDS |
| AAGGTATTGTGGATGATGAA+AGG | 0.587808 | 2_4:+18210521 | Msa0318990:CDS |
| AGAAGTTGACATTGGATTTG+GGG | 0.588335 | 2_4:-18209453 | None:intergenic |
| TTGATAGAATGAAGAAACAA+GGG | 0.589111 | 2_4:+18210038 | Msa0318990:CDS |
| TGTCGAAGCCTGTTGAGAAG+AGG | 0.590299 | 2_4:+18210353 | Msa0318990:CDS |
| TTGCGCAAGTGTTGCCTTGG+GGG | 0.591039 | 2_4:+18210260 | Msa0318990:CDS |
| AGATCAATGCTGCAAAGAAG+CGG | 0.602307 | 2_4:+18210800 | Msa0318990:CDS |
| GGAAGGATGTTGATCAGACT+GGG | 0.602769 | 2_4:+18210374 | Msa0318990:CDS |
| TCGGTTGGAGGATTTGGCGA+AGG | 0.605651 | 2_4:+18210171 | Msa0318990:CDS |
| GAAGTTGACATTGGATTTGG+GGG | 0.606869 | 2_4:-18209452 | None:intergenic |
| ACTTACACCATCGGAATCAA+CGG | 0.614239 | 2_4:+18209581 | Msa0318990:CDS |
| TAAGTTTCGAATTGATCGAA+GGG | 0.622958 | 2_4:-18209563 | None:intergenic |
| ATCGGAATCAACGGTCCACA+AGG | 0.623023 | 2_4:+18209590 | Msa0318990:CDS |
| GATGAGTGCTTAACACAGGA+GGG | 0.625762 | 2_4:+18210418 | Msa0318990:CDS |
| TGATGAGTGCTTAACACAGG+AGG | 0.628170 | 2_4:+18210417 | Msa0318990:CDS |
| TGAGGAGCAGAATGAACCGC+CGG | 0.630001 | 2_4:-18209525 | None:intergenic |
| AATAGAGAAGGATATTGGAG+TGG | 0.630511 | 2_4:+18210720 | Msa0318990:CDS |
| CAATTCGAAACTTACACCAT+CGG | 0.639402 | 2_4:+18209572 | Msa0318990:CDS |
| CAAGGAACCTTCGTTCACAT+CGG | 0.641632 | 2_4:+18209608 | Msa0318990:CDS |
| GATGAATGAAGTTGCGAATG+CGG | 0.643098 | 2_4:+18209859 | Msa0318990:CDS |
| ATGTGAACGAAGGTTCCTTG+TGG | 0.647912 | 2_4:-18209605 | None:intergenic |
| GGAGGGGCAATATGAGTATG+GGG | 0.648566 | 2_4:+18210435 | Msa0318990:CDS |
| GGAGGTTCCGATGTGAACGA+AGG | 0.651359 | 2_4:-18209615 | None:intergenic |
| GGTTCATTCTGCTCCTCATG+CGG | 0.655444 | 2_4:+18209530 | Msa0318990:CDS |
| GAAGCCTGTTGAGAAGAGGA+AGG | 0.661443 | 2_4:+18210357 | Msa0318990:CDS |
| GTTGCGCAAGTGTTGCCTTG+GGG | 0.664565 | 2_4:+18210259 | Msa0318990:CDS |
| TGATAGAATGAAGAAACAAG+GGG | 0.688848 | 2_4:+18210039 | Msa0318990:CDS |
| ACCCGCGACGACGAAACCGG+CGG | 0.692169 | 2_4:+18209509 | Msa0318990:CDS |
| GTAGATAGTACCTGAACCGG+AGG | 0.693829 | 2_4:-18209633 | None:intergenic |
| ATGAGTGCTTAACACAGGAG+GGG | 0.699013 | 2_4:+18210419 | Msa0318990:CDS |
| TGACCATTGACAAATGAGGG+TGG | 0.700636 | 2_4:-18210751 | None:intergenic |
| GGTTGATGAGTGCTTAACAC+AGG | 0.740005 | 2_4:+18210414 | Msa0318990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTAATTTCAATTTTCT+TGG | - | chr2_4:18209732-18209751 | None:intergenic | 10.0% |
| !!! | TTTATTAATTTCAATTTTCT+TGG | - | chr2_4:18209732-18209751 | None:intergenic | 10.0% |
| !!! | TATAAATTATTTGTTGTGAA+TGG | - | chr2_4:18209411-18209430 | None:intergenic | 15.0% |
| !!! | TATAAATTATTTGTTGTGAA+TGG | - | chr2_4:18209411-18209430 | None:intergenic | 15.0% |
| !!! | AAAAATACTGAGAATCTTTT+CGG | - | chr2_4:18210477-18210496 | None:intergenic | 20.0% |
| !!! | TATTTTTCATTGCAAAGTAA+TGG | + | chr2_4:18210490-18210509 | Msa0318990:CDS | 20.0% |
| !!! | AAAAATACTGAGAATCTTTT+CGG | - | chr2_4:18210477-18210496 | None:intergenic | 20.0% |
| !!! | TATTTTTCATTGCAAAGTAA+TGG | + | chr2_4:18210490-18210509 | Msa0318990:CDS | 20.0% |
| !! | TATTAGGGTTGTTGATTATT+TGG | + | chr2_4:18209916-18209935 | Msa0318990:CDS | 25.0% |
| ! | TTGATTATTTGGATTTGAGA+GGG | + | chr2_4:18209927-18209946 | Msa0318990:CDS | 25.0% |
| ! | AAATGCACAATATCAAAATC+TGG | - | chr2_4:18209962-18209981 | None:intergenic | 25.0% |
| !! | ATATTGTGCATTTGTTGAAA+AGG | + | chr2_4:18209969-18209988 | Msa0318990:CDS | 25.0% |
| ! | TTGATAGAATGAAGAAACAA+GGG | + | chr2_4:18210038-18210057 | Msa0318990:CDS | 25.0% |
| !!! | AGATTAATGGAGTTGATATT+CGG | + | chr2_4:18210152-18210171 | Msa0318990:CDS | 25.0% |
| ! | ACTGAAAGATTTAATAGAGA+AGG | + | chr2_4:18210708-18210727 | Msa0318990:CDS | 25.0% |
| ! | GATTTAATAGAGAAGGATAT+TGG | + | chr2_4:18210715-18210734 | Msa0318990:CDS | 25.0% |
| ! | GTCAATTGAAATGTAAAATG+AGG | + | chr2_4:18210770-18210789 | Msa0318990:CDS | 25.0% |
| !! | TATTAGGGTTGTTGATTATT+TGG | + | chr2_4:18209916-18209935 | Msa0318990:CDS | 25.0% |
| ! | TTGATTATTTGGATTTGAGA+GGG | + | chr2_4:18209927-18209946 | Msa0318990:CDS | 25.0% |
| ! | AAATGCACAATATCAAAATC+TGG | - | chr2_4:18209962-18209981 | None:intergenic | 25.0% |
| !! | ATATTGTGCATTTGTTGAAA+AGG | + | chr2_4:18209969-18209988 | Msa0318990:CDS | 25.0% |
| ! | TTGATAGAATGAAGAAACAA+GGG | + | chr2_4:18210038-18210057 | Msa0318990:CDS | 25.0% |
| !!! | AGATTAATGGAGTTGATATT+CGG | + | chr2_4:18210152-18210171 | Msa0318990:CDS | 25.0% |
| ! | ACTGAAAGATTTAATAGAGA+AGG | + | chr2_4:18210708-18210727 | Msa0318990:CDS | 25.0% |
| ! | GATTTAATAGAGAAGGATAT+TGG | + | chr2_4:18210715-18210734 | Msa0318990:CDS | 25.0% |
| ! | GTCAATTGAAATGTAAAATG+AGG | + | chr2_4:18210770-18210789 | Msa0318990:CDS | 25.0% |
| !! | ATGAAAGTGTTGAGAAAAGT+CGG | - | chr2_4:18209338-18209357 | None:intergenic | 30.0% |
| ATGGTGAATAGTTAGATTTG+AGG | - | chr2_4:18209392-18209411 | None:intergenic | 30.0% | |
| TAAGTTTCGAATTGATCGAA+GGG | - | chr2_4:18209566-18209585 | None:intergenic | 30.0% | |
| TACGAGCTGAGAATAATTTA+CGG | - | chr2_4:18209670-18209689 | None:intergenic | 30.0% | |
| AACAATTCACCACTCAATTA+GGG | + | chr2_4:18209699-18209718 | Msa0318990:intron | 30.0% | |
| ATGATTAGTGATATCACTGA+TGG | + | chr2_4:18209752-18209771 | Msa0318990:intron | 30.0% | |
| !!! | GATTGGTTTCAGGTTTTAAT+TGG | + | chr2_4:18209791-18209810 | Msa0318990:intron | 30.0% |
| GTTGATTATTTGGATTTGAG+AGG | + | chr2_4:18209926-18209945 | Msa0318990:CDS | 30.0% | |
| !! | TTGATGGTTGTCATTGTTTT+AGG | + | chr2_4:18209996-18210015 | Msa0318990:CDS | 30.0% |
| !! | TGATGGTTGTCATTGTTTTA+GGG | + | chr2_4:18209997-18210016 | Msa0318990:CDS | 30.0% |
| ! | GTTGATAGAATGAAGAAACA+AGG | + | chr2_4:18210037-18210056 | Msa0318990:CDS | 30.0% |
| TGATAGAATGAAGAAACAAG+GGG | + | chr2_4:18210039-18210058 | Msa0318990:CDS | 30.0% | |
| TCCATATACTGAATCACAAA+CGG | - | chr2_4:18210322-18210341 | None:intergenic | 30.0% | |
| AATTGACCATTGACAAATGA+GGG | - | chr2_4:18210757-18210776 | None:intergenic | 30.0% | |
| ACTTGTTCTTCATCAAGTAA+AGG | + | chr2_4:18210969-18210988 | Msa0318990:CDS | 30.0% | |
| !! | ATGAAAGTGTTGAGAAAAGT+CGG | - | chr2_4:18209338-18209357 | None:intergenic | 30.0% |
| ATGGTGAATAGTTAGATTTG+AGG | - | chr2_4:18209392-18209411 | None:intergenic | 30.0% | |
| TAAGTTTCGAATTGATCGAA+GGG | - | chr2_4:18209566-18209585 | None:intergenic | 30.0% | |
| TACGAGCTGAGAATAATTTA+CGG | - | chr2_4:18209670-18209689 | None:intergenic | 30.0% | |
| AACAATTCACCACTCAATTA+GGG | + | chr2_4:18209699-18209718 | Msa0318990:intron | 30.0% | |
| ATGATTAGTGATATCACTGA+TGG | + | chr2_4:18209752-18209771 | Msa0318990:intron | 30.0% | |
| !!! | GATTGGTTTCAGGTTTTAAT+TGG | + | chr2_4:18209791-18209810 | Msa0318990:intron | 30.0% |
| GTTGATTATTTGGATTTGAG+AGG | + | chr2_4:18209926-18209945 | Msa0318990:CDS | 30.0% | |
| !! | TTGATGGTTGTCATTGTTTT+AGG | + | chr2_4:18209996-18210015 | Msa0318990:CDS | 30.0% |
| !! | TGATGGTTGTCATTGTTTTA+GGG | + | chr2_4:18209997-18210016 | Msa0318990:CDS | 30.0% |
| ! | GTTGATAGAATGAAGAAACA+AGG | + | chr2_4:18210037-18210056 | Msa0318990:CDS | 30.0% |
| TGATAGAATGAAGAAACAAG+GGG | + | chr2_4:18210039-18210058 | Msa0318990:CDS | 30.0% | |
| TCCATATACTGAATCACAAA+CGG | - | chr2_4:18210322-18210341 | None:intergenic | 30.0% | |
| AATTGACCATTGACAAATGA+GGG | - | chr2_4:18210757-18210776 | None:intergenic | 30.0% | |
| ACTTGTTCTTCATCAAGTAA+AGG | + | chr2_4:18210969-18210988 | Msa0318990:CDS | 30.0% | |
| AGAAGTTGACATTGGATTTG+GGG | - | chr2_4:18209456-18209475 | None:intergenic | 35.0% | |
| GAGAAGTTGACATTGGATTT+GGG | - | chr2_4:18209457-18209476 | None:intergenic | 35.0% | |
| GTAAGTTTCGAATTGATCGA+AGG | - | chr2_4:18209567-18209586 | None:intergenic | 35.0% | |
| CAATTCGAAACTTACACCAT+CGG | + | chr2_4:18209572-18209591 | Msa0318990:CDS | 35.0% | |
| TTGAGTGGTGAATTGTTCAA+CGG | - | chr2_4:18209696-18209715 | None:intergenic | 35.0% | |
| GAACAATTCACCACTCAATT+AGG | + | chr2_4:18209698-18209717 | Msa0318990:intron | 35.0% | |
| ! | CGTGTTGTTATGTTGTTATG+CGG | + | chr2_4:18209816-18209835 | Msa0318990:intron | 35.0% |
| !! | GTTGTGATGTTTTTGAGCTT+GGG | + | chr2_4:18209885-18209904 | Msa0318990:CDS | 35.0% |
| !! | TTGTTGAAAAGGAGTGTTGA+TGG | + | chr2_4:18209980-18209999 | Msa0318990:CDS | 35.0% |
| !!! | ATTGTTTTAGGGAGGTTGAT+AGG | + | chr2_4:18210008-18210027 | Msa0318990:CDS | 35.0% |
| !!! | GGTGAAGTTGTTTTTGAGTA+CGG | + | chr2_4:18210081-18210100 | Msa0318990:CDS | 35.0% |
| !!! | GTGAAGTTGTTTTTGAGTAC+GGG | + | chr2_4:18210082-18210101 | Msa0318990:CDS | 35.0% |
| !!! | TGAAGTTGTTTTTGAGTACG+GGG | + | chr2_4:18210083-18210102 | Msa0318990:CDS | 35.0% |
| !! | TAATGGAGTTGATATTCGGT+TGG | + | chr2_4:18210156-18210175 | Msa0318990:CDS | 35.0% |
| ! | TTGTTTCGACTTGTAGAACT+AGG | + | chr2_4:18210206-18210225 | Msa0318990:CDS | 35.0% |
| CAAAGTAATGGTGATAGAGA+AGG | + | chr2_4:18210502-18210521 | Msa0318990:CDS | 35.0% | |
| !! | AAGGTATTGTGGATGATGAA+AGG | + | chr2_4:18210521-18210540 | Msa0318990:CDS | 35.0% |
| TACATCAGAGACAAACATTC+AGG | - | chr2_4:18210559-18210578 | None:intergenic | 35.0% | |
| CAAATGTTCAGAAACGGAAA+AGG | + | chr2_4:18210626-18210645 | Msa0318990:CDS | 35.0% | |
| ! | AAGGTTGGAACTTGATTTTC+AGG | + | chr2_4:18210645-18210664 | Msa0318990:CDS | 35.0% |
| AATAGAGAAGGATATTGGAG+TGG | + | chr2_4:18210720-18210739 | Msa0318990:CDS | 35.0% | |
| CAATTGACCATTGACAAATG+AGG | - | chr2_4:18210758-18210777 | None:intergenic | 35.0% | |
| ATCCATTACATGCTGATCTT+GGG | + | chr2_4:18210839-18210858 | Msa0318990:CDS | 35.0% | |
| TCTTCTGTTCTTCTTTCTCT+CGG | - | chr2_4:18210902-18210921 | None:intergenic | 35.0% | |
| !! | TGTCTGTTGATGGTATTGAT+TGG | + | chr2_4:18210926-18210945 | Msa0318990:CDS | 35.0% |
| !! | GTCTGTTGATGGTATTGATT+GGG | + | chr2_4:18210927-18210946 | Msa0318990:CDS | 35.0% |
| TCTTCATCAAGTAAAGGATG+AGG | + | chr2_4:18210975-18210994 | Msa0318990:CDS | 35.0% | |
| AAGGATGAGGAAATTGAGAA+AGG | + | chr2_4:18210988-18211007 | Msa0318990:CDS | 35.0% | |
| AGGATGAGGAAATTGAGAAA+GGG | + | chr2_4:18210989-18211008 | Msa0318990:CDS | 35.0% | |
| AAACACATATAGGCCTAGTA+AGG | - | chr2_4:18211025-18211044 | None:intergenic | 35.0% | |
| AGAAGTTGACATTGGATTTG+GGG | - | chr2_4:18209456-18209475 | None:intergenic | 35.0% | |
| GAGAAGTTGACATTGGATTT+GGG | - | chr2_4:18209457-18209476 | None:intergenic | 35.0% | |
| GTAAGTTTCGAATTGATCGA+AGG | - | chr2_4:18209567-18209586 | None:intergenic | 35.0% | |
| CAATTCGAAACTTACACCAT+CGG | + | chr2_4:18209572-18209591 | Msa0318990:CDS | 35.0% | |
| TTGAGTGGTGAATTGTTCAA+CGG | - | chr2_4:18209696-18209715 | None:intergenic | 35.0% | |
| GAACAATTCACCACTCAATT+AGG | + | chr2_4:18209698-18209717 | Msa0318990:intron | 35.0% | |
| ! | CGTGTTGTTATGTTGTTATG+CGG | + | chr2_4:18209816-18209835 | Msa0318990:intron | 35.0% |
| !! | GTTGTGATGTTTTTGAGCTT+GGG | + | chr2_4:18209885-18209904 | Msa0318990:CDS | 35.0% |
| !! | TTGTTGAAAAGGAGTGTTGA+TGG | + | chr2_4:18209980-18209999 | Msa0318990:CDS | 35.0% |
| !!! | ATTGTTTTAGGGAGGTTGAT+AGG | + | chr2_4:18210008-18210027 | Msa0318990:CDS | 35.0% |
| !!! | GGTGAAGTTGTTTTTGAGTA+CGG | + | chr2_4:18210081-18210100 | Msa0318990:CDS | 35.0% |
| !!! | GTGAAGTTGTTTTTGAGTAC+GGG | + | chr2_4:18210082-18210101 | Msa0318990:CDS | 35.0% |
| !!! | TGAAGTTGTTTTTGAGTACG+GGG | + | chr2_4:18210083-18210102 | Msa0318990:CDS | 35.0% |
| !! | TAATGGAGTTGATATTCGGT+TGG | + | chr2_4:18210156-18210175 | Msa0318990:CDS | 35.0% |
| ! | TTGTTTCGACTTGTAGAACT+AGG | + | chr2_4:18210206-18210225 | Msa0318990:CDS | 35.0% |
| CAAAGTAATGGTGATAGAGA+AGG | + | chr2_4:18210502-18210521 | Msa0318990:CDS | 35.0% | |
| !! | AAGGTATTGTGGATGATGAA+AGG | + | chr2_4:18210521-18210540 | Msa0318990:CDS | 35.0% |
| TACATCAGAGACAAACATTC+AGG | - | chr2_4:18210559-18210578 | None:intergenic | 35.0% | |
| CAAATGTTCAGAAACGGAAA+AGG | + | chr2_4:18210626-18210645 | Msa0318990:CDS | 35.0% | |
| ! | AAGGTTGGAACTTGATTTTC+AGG | + | chr2_4:18210645-18210664 | Msa0318990:CDS | 35.0% |
| AATAGAGAAGGATATTGGAG+TGG | + | chr2_4:18210720-18210739 | Msa0318990:CDS | 35.0% | |
| CAATTGACCATTGACAAATG+AGG | - | chr2_4:18210758-18210777 | None:intergenic | 35.0% | |
| ATCCATTACATGCTGATCTT+GGG | + | chr2_4:18210839-18210858 | Msa0318990:CDS | 35.0% | |
| TCTTCTGTTCTTCTTTCTCT+CGG | - | chr2_4:18210902-18210921 | None:intergenic | 35.0% | |
| !! | TGTCTGTTGATGGTATTGAT+TGG | + | chr2_4:18210926-18210945 | Msa0318990:CDS | 35.0% |
| !! | GTCTGTTGATGGTATTGATT+GGG | + | chr2_4:18210927-18210946 | Msa0318990:CDS | 35.0% |
| TCTTCATCAAGTAAAGGATG+AGG | + | chr2_4:18210975-18210994 | Msa0318990:CDS | 35.0% | |
| AAGGATGAGGAAATTGAGAA+AGG | + | chr2_4:18210988-18211007 | Msa0318990:CDS | 35.0% | |
| AGGATGAGGAAATTGAGAAA+GGG | + | chr2_4:18210989-18211008 | Msa0318990:CDS | 35.0% | |
| AAACACATATAGGCCTAGTA+AGG | - | chr2_4:18211025-18211044 | None:intergenic | 35.0% | |
| ACATTGGATTTGGGGGTTTA+GGG | - | chr2_4:18209448-18209467 | None:intergenic | 40.0% | |
| GAAGTTGACATTGGATTTGG+GGG | - | chr2_4:18209455-18209474 | None:intergenic | 40.0% | |
| CGAGAAGTTGACATTGGATT+TGG | - | chr2_4:18209458-18209477 | None:intergenic | 40.0% | |
| ACTTACACCATCGGAATCAA+CGG | + | chr2_4:18209581-18209600 | Msa0318990:CDS | 40.0% | |
| AGAGTAGATAGTACCTGAAC+CGG | - | chr2_4:18209639-18209658 | None:intergenic | 40.0% | |
| ! | GATATCACTGATGGCGAATT+CGG | + | chr2_4:18209761-18209780 | Msa0318990:intron | 40.0% |
| GATGAATGAAGTTGCGAATG+CGG | + | chr2_4:18209859-18209878 | Msa0318990:CDS | 40.0% | |
| !! | GGTTGTGATGTTTTTGAGCT+TGG | + | chr2_4:18209884-18209903 | Msa0318990:CDS | 40.0% |
| !! | TGTTTTTGAGCTTGGGAAGA+TGG | + | chr2_4:18209892-18209911 | Msa0318990:CDS | 40.0% |
| AGCTTGGGAAGATGGTTATT+AGG | + | chr2_4:18209900-18209919 | Msa0318990:CDS | 40.0% | |
| GCTTGGGAAGATGGTTATTA+GGG | + | chr2_4:18209901-18209920 | Msa0318990:CDS | 40.0% | |
| !!! | TGGTTGTCATTGTTTTAGGG+AGG | + | chr2_4:18210000-18210019 | Msa0318990:CDS | 40.0% |
| !! | GGTGTTTTTGTTGCAATGTG+CGG | + | chr2_4:18210060-18210079 | Msa0318990:CDS | 40.0% |
| !!! | GTTTTGGTTGCGGAGATTAA+TGG | + | chr2_4:18210139-18210158 | Msa0318990:CDS | 40.0% |
| TGATATTCGGTTGGAGGATT+TGG | + | chr2_4:18210165-18210184 | Msa0318990:CDS | 40.0% | |
| TTCGTAATATCTTTCCCCCA+AGG | - | chr2_4:18210277-18210296 | None:intergenic | 40.0% | |
| GCCGTTTGTGATTCAGTATA+TGG | + | chr2_4:18210318-18210337 | Msa0318990:CDS | 40.0% | |
| CAATATGAGTATGGGGTTGA+TGG | + | chr2_4:18210442-18210461 | Msa0318990:CDS | 40.0% | |
| !! | TGGTGATAGAGAAGGTATTG+TGG | + | chr2_4:18210510-18210529 | Msa0318990:CDS | 40.0% |
| ATCGTGATGCTATGTCTTCA+AGG | + | chr2_4:18210599-18210618 | Msa0318990:CDS | 40.0% | |
| GGAGTGCAAATGTTCAGAAA+CGG | + | chr2_4:18210620-18210639 | Msa0318990:CDS | 40.0% | |
| TGTTCAGAAACGGAAAAGGT+TGG | + | chr2_4:18210630-18210649 | Msa0318990:CDS | 40.0% | |
| !! | TGGAACTTGATTTTCAGGAG+TGG | + | chr2_4:18210650-18210669 | Msa0318990:CDS | 40.0% |
| !! | AACTTGATTTTCAGGAGTGG+TGG | + | chr2_4:18210653-18210672 | Msa0318990:CDS | 40.0% |
| AGATCAATGCTGCAAAGAAG+CGG | + | chr2_4:18210800-18210819 | Msa0318990:CDS | 40.0% | |
| CATCCATTACATGCTGATCT+TGG | + | chr2_4:18210838-18210857 | Msa0318990:CDS | 40.0% | |
| TCCATTACATGCTGATCTTG+GGG | + | chr2_4:18210840-18210859 | Msa0318990:CDS | 40.0% | |
| GAGAGAAAGAAGAACAGAAG+AGG | + | chr2_4:18210901-18210920 | Msa0318990:CDS | 40.0% | |
| AGAAGAGGAATGTCTGTTGA+TGG | + | chr2_4:18210916-18210935 | Msa0318990:CDS | 40.0% | |
| GGGCATTACAATACCTTACT+AGG | + | chr2_4:18211009-18211028 | Msa0318990:CDS | 40.0% | |
| GGCCTATATGTGTTTAACTC+TGG | + | chr2_4:18211030-18211049 | Msa0318990:CDS | 40.0% | |
| CGCCAGAGTTAAACACATAT+AGG | - | chr2_4:18211035-18211054 | None:intergenic | 40.0% | |
| ACATTGGATTTGGGGGTTTA+GGG | - | chr2_4:18209448-18209467 | None:intergenic | 40.0% | |
| GAAGTTGACATTGGATTTGG+GGG | - | chr2_4:18209455-18209474 | None:intergenic | 40.0% | |
| CGAGAAGTTGACATTGGATT+TGG | - | chr2_4:18209458-18209477 | None:intergenic | 40.0% | |
| ACTTACACCATCGGAATCAA+CGG | + | chr2_4:18209581-18209600 | Msa0318990:CDS | 40.0% | |
| AGAGTAGATAGTACCTGAAC+CGG | - | chr2_4:18209639-18209658 | None:intergenic | 40.0% | |
| ! | GATATCACTGATGGCGAATT+CGG | + | chr2_4:18209761-18209780 | Msa0318990:intron | 40.0% |
| GATGAATGAAGTTGCGAATG+CGG | + | chr2_4:18209859-18209878 | Msa0318990:CDS | 40.0% | |
| !! | GGTTGTGATGTTTTTGAGCT+TGG | + | chr2_4:18209884-18209903 | Msa0318990:CDS | 40.0% |
| !! | TGTTTTTGAGCTTGGGAAGA+TGG | + | chr2_4:18209892-18209911 | Msa0318990:CDS | 40.0% |
| AGCTTGGGAAGATGGTTATT+AGG | + | chr2_4:18209900-18209919 | Msa0318990:CDS | 40.0% | |
| GCTTGGGAAGATGGTTATTA+GGG | + | chr2_4:18209901-18209920 | Msa0318990:CDS | 40.0% | |
| !!! | TGGTTGTCATTGTTTTAGGG+AGG | + | chr2_4:18210000-18210019 | Msa0318990:CDS | 40.0% |
| !! | GGTGTTTTTGTTGCAATGTG+CGG | + | chr2_4:18210060-18210079 | Msa0318990:CDS | 40.0% |
| !!! | GTTTTGGTTGCGGAGATTAA+TGG | + | chr2_4:18210139-18210158 | Msa0318990:CDS | 40.0% |
| TGATATTCGGTTGGAGGATT+TGG | + | chr2_4:18210165-18210184 | Msa0318990:CDS | 40.0% | |
| TTCGTAATATCTTTCCCCCA+AGG | - | chr2_4:18210277-18210296 | None:intergenic | 40.0% | |
| GCCGTTTGTGATTCAGTATA+TGG | + | chr2_4:18210318-18210337 | Msa0318990:CDS | 40.0% | |
| CAATATGAGTATGGGGTTGA+TGG | + | chr2_4:18210442-18210461 | Msa0318990:CDS | 40.0% | |
| !! | TGGTGATAGAGAAGGTATTG+TGG | + | chr2_4:18210510-18210529 | Msa0318990:CDS | 40.0% |
| ATCGTGATGCTATGTCTTCA+AGG | + | chr2_4:18210599-18210618 | Msa0318990:CDS | 40.0% | |
| GGAGTGCAAATGTTCAGAAA+CGG | + | chr2_4:18210620-18210639 | Msa0318990:CDS | 40.0% | |
| TGTTCAGAAACGGAAAAGGT+TGG | + | chr2_4:18210630-18210649 | Msa0318990:CDS | 40.0% | |
| !! | TGGAACTTGATTTTCAGGAG+TGG | + | chr2_4:18210650-18210669 | Msa0318990:CDS | 40.0% |
| !! | AACTTGATTTTCAGGAGTGG+TGG | + | chr2_4:18210653-18210672 | Msa0318990:CDS | 40.0% |
| AGATCAATGCTGCAAAGAAG+CGG | + | chr2_4:18210800-18210819 | Msa0318990:CDS | 40.0% | |
| CATCCATTACATGCTGATCT+TGG | + | chr2_4:18210838-18210857 | Msa0318990:CDS | 40.0% | |
| TCCATTACATGCTGATCTTG+GGG | + | chr2_4:18210840-18210859 | Msa0318990:CDS | 40.0% | |
| GAGAGAAAGAAGAACAGAAG+AGG | + | chr2_4:18210901-18210920 | Msa0318990:CDS | 40.0% | |
| AGAAGAGGAATGTCTGTTGA+TGG | + | chr2_4:18210916-18210935 | Msa0318990:CDS | 40.0% | |
| GGGCATTACAATACCTTACT+AGG | + | chr2_4:18211009-18211028 | Msa0318990:CDS | 40.0% | |
| GGCCTATATGTGTTTAACTC+TGG | + | chr2_4:18211030-18211049 | Msa0318990:CDS | 40.0% | |
| CGCCAGAGTTAAACACATAT+AGG | - | chr2_4:18211035-18211054 | None:intergenic | 40.0% | |
| GACATTGGATTTGGGGGTTT+AGG | - | chr2_4:18209449-18209468 | None:intergenic | 45.0% | |
| ATGTGAACGAAGGTTCCTTG+TGG | - | chr2_4:18209608-18209627 | None:intergenic | 45.0% | |
| CAAGGAACCTTCGTTCACAT+CGG | + | chr2_4:18209608-18209627 | Msa0318990:CDS | 45.0% | |
| GGAAGCTAACCCTAATTGAG+TGG | - | chr2_4:18209711-18209730 | None:intergenic | 45.0% | |
| AATGAAGTTGCGAATGCGGT+TGG | + | chr2_4:18209863-18209882 | Msa0318990:CDS | 45.0% | |
| !! | TAGGGAGGTTGATAGGAGTT+TGG | + | chr2_4:18210015-18210034 | Msa0318990:CDS | 45.0% |
| !!! | TGCGGTTTTGGTTTTGGTTG+CGG | + | chr2_4:18210129-18210148 | Msa0318990:CDS | 45.0% |
| !! | TGGAGTTGATATTCGGTTGG+AGG | + | chr2_4:18210159-18210178 | Msa0318990:CDS | 45.0% |
| ACATCCTTCCTCTTCTCAAC+AGG | - | chr2_4:18210364-18210383 | None:intergenic | 45.0% | |
| AGGAAGGATGTTGATCAGAC+TGG | + | chr2_4:18210373-18210392 | Msa0318990:CDS | 45.0% | |
| GGAAGGATGTTGATCAGACT+GGG | + | chr2_4:18210374-18210393 | Msa0318990:CDS | 45.0% | |
| ! | TGATCAGACTGGGTTGGATT+TGG | + | chr2_4:18210384-18210403 | Msa0318990:CDS | 45.0% |
| !! | GGTTGATGAGTGCTTAACAC+AGG | + | chr2_4:18210414-18210433 | Msa0318990:CDS | 45.0% |
| TGATGAGTGCTTAACACAGG+AGG | + | chr2_4:18210417-18210436 | Msa0318990:CDS | 45.0% | |
| GATGAGTGCTTAACACAGGA+GGG | + | chr2_4:18210418-18210437 | Msa0318990:CDS | 45.0% | |
| ATGAGTGCTTAACACAGGAG+GGG | + | chr2_4:18210419-18210438 | Msa0318990:CDS | 45.0% | |
| AGGAGGGGCAATATGAGTAT+GGG | + | chr2_4:18210434-18210453 | Msa0318990:CDS | 45.0% | |
| ! | GGAGTGGTGGAATGAAGAAT+CGG | + | chr2_4:18210666-18210685 | Msa0318990:CDS | 45.0% |
| ATTGACAAATGAGGGTGGCA+TGG | - | chr2_4:18210749-18210768 | None:intergenic | 45.0% | |
| ATGCCACCCTCATTTGTCAA+TGG | + | chr2_4:18210748-18210767 | Msa0318990:CDS | 45.0% | |
| TGACCATTGACAAATGAGGG+TGG | - | chr2_4:18210754-18210773 | None:intergenic | 45.0% | |
| TCCCCAAGATCAGCATGTAA+TGG | - | chr2_4:18210844-18210863 | None:intergenic | 45.0% | |
| CTTGGGGATACTGCAAATCT+TGG | + | chr2_4:18210856-18210875 | Msa0318990:CDS | 45.0% | |
| GACATTGGATTTGGGGGTTT+AGG | - | chr2_4:18209449-18209468 | None:intergenic | 45.0% | |
| ATGTGAACGAAGGTTCCTTG+TGG | - | chr2_4:18209608-18209627 | None:intergenic | 45.0% | |
| CAAGGAACCTTCGTTCACAT+CGG | + | chr2_4:18209608-18209627 | Msa0318990:CDS | 45.0% | |
| GGAAGCTAACCCTAATTGAG+TGG | - | chr2_4:18209711-18209730 | None:intergenic | 45.0% | |
| AATGAAGTTGCGAATGCGGT+TGG | + | chr2_4:18209863-18209882 | Msa0318990:CDS | 45.0% | |
| !! | TAGGGAGGTTGATAGGAGTT+TGG | + | chr2_4:18210015-18210034 | Msa0318990:CDS | 45.0% |
| !!! | TGCGGTTTTGGTTTTGGTTG+CGG | + | chr2_4:18210129-18210148 | Msa0318990:CDS | 45.0% |
| !! | TGGAGTTGATATTCGGTTGG+AGG | + | chr2_4:18210159-18210178 | Msa0318990:CDS | 45.0% |
| ACATCCTTCCTCTTCTCAAC+AGG | - | chr2_4:18210364-18210383 | None:intergenic | 45.0% | |
| AGGAAGGATGTTGATCAGAC+TGG | + | chr2_4:18210373-18210392 | Msa0318990:CDS | 45.0% | |
| GGAAGGATGTTGATCAGACT+GGG | + | chr2_4:18210374-18210393 | Msa0318990:CDS | 45.0% | |
| ! | TGATCAGACTGGGTTGGATT+TGG | + | chr2_4:18210384-18210403 | Msa0318990:CDS | 45.0% |
| !! | GGTTGATGAGTGCTTAACAC+AGG | + | chr2_4:18210414-18210433 | Msa0318990:CDS | 45.0% |
| TGATGAGTGCTTAACACAGG+AGG | + | chr2_4:18210417-18210436 | Msa0318990:CDS | 45.0% | |
| GATGAGTGCTTAACACAGGA+GGG | + | chr2_4:18210418-18210437 | Msa0318990:CDS | 45.0% | |
| ATGAGTGCTTAACACAGGAG+GGG | + | chr2_4:18210419-18210438 | Msa0318990:CDS | 45.0% | |
| AGGAGGGGCAATATGAGTAT+GGG | + | chr2_4:18210434-18210453 | Msa0318990:CDS | 45.0% | |
| ! | GGAGTGGTGGAATGAAGAAT+CGG | + | chr2_4:18210666-18210685 | Msa0318990:CDS | 45.0% |
| ATTGACAAATGAGGGTGGCA+TGG | - | chr2_4:18210749-18210768 | None:intergenic | 45.0% | |
| ATGCCACCCTCATTTGTCAA+TGG | + | chr2_4:18210748-18210767 | Msa0318990:CDS | 45.0% | |
| TGACCATTGACAAATGAGGG+TGG | - | chr2_4:18210754-18210773 | None:intergenic | 45.0% | |
| TCCCCAAGATCAGCATGTAA+TGG | - | chr2_4:18210844-18210863 | None:intergenic | 45.0% | |
| CTTGGGGATACTGCAAATCT+TGG | + | chr2_4:18210856-18210875 | Msa0318990:CDS | 45.0% | |
| CAGCGACGAGAAGTTGACAT+TGG | - | chr2_4:18209464-18209483 | None:intergenic | 50.0% | |
| GGTTCATTCTGCTCCTCATG+CGG | + | chr2_4:18209530-18209549 | Msa0318990:CDS | 50.0% | |
| !! | TTGTGGACCGTTGATTCCGA+TGG | - | chr2_4:18209591-18209610 | None:intergenic | 50.0% |
| ATCGGAATCAACGGTCCACA+AGG | + | chr2_4:18209590-18209609 | Msa0318990:CDS | 50.0% | |
| TTCGTTCACATCGGAACCTC+CGG | + | chr2_4:18209617-18209636 | Msa0318990:CDS | 50.0% | |
| GTAGATAGTACCTGAACCGG+AGG | - | chr2_4:18209636-18209655 | None:intergenic | 50.0% | |
| ! | ACTGATGGCGAATTCGGTCA+AGG | + | chr2_4:18209767-18209786 | Msa0318990:intron | 50.0% |
| ! | CTGATGGCGAATTCGGTCAA+GGG | + | chr2_4:18209768-18209787 | Msa0318990:intron | 50.0% |
| ! | TGATGGCGAATTCGGTCAAG+GGG | + | chr2_4:18209769-18209788 | Msa0318990:intron | 50.0% |
| !!! | TGTTTTTGAGTACGGGGCGT+AGG | + | chr2_4:18210089-18210108 | Msa0318990:CDS | 50.0% |
| ! | GCCTTTACCTTTGGTGGTTG+CGG | + | chr2_4:18210111-18210130 | Msa0318990:CDS | 50.0% |
| ACCGCAACCACCAAAGGTAA+AGG | - | chr2_4:18210115-18210134 | None:intergenic | 50.0% | |
| !! | ACCTTTGGTGGTTGCGGTTT+TGG | + | chr2_4:18210117-18210136 | Msa0318990:CDS | 50.0% |
| ACCAAAACCGCAACCACCAA+AGG | - | chr2_4:18210121-18210140 | None:intergenic | 50.0% | |
| !!! | GGTGGTTGCGGTTTTGGTTT+TGG | + | chr2_4:18210123-18210142 | Msa0318990:CDS | 50.0% |
| ! | ATGTTGCGCAAGTGTTGCCT+TGG | + | chr2_4:18210257-18210276 | Msa0318990:CDS | 50.0% |
| ! | TGTTGCGCAAGTGTTGCCTT+GGG | + | chr2_4:18210258-18210277 | Msa0318990:CDS | 50.0% |
| TGTCGAAGCCTGTTGAGAAG+AGG | + | chr2_4:18210353-18210372 | Msa0318990:CDS | 50.0% | |
| GAAGCCTGTTGAGAAGAGGA+AGG | + | chr2_4:18210357-18210376 | Msa0318990:CDS | 50.0% | |
| GGATGTTGATCAGACTGGGT+TGG | + | chr2_4:18210378-18210397 | Msa0318990:CDS | 50.0% | |
| ! | TGGGTTGGATTTGGCTGATG+TGG | + | chr2_4:18210393-18210412 | Msa0318990:CDS | 50.0% |
| CAGGAGGGGCAATATGAGTA+TGG | + | chr2_4:18210433-18210452 | Msa0318990:CDS | 50.0% | |
| GGAGGGGCAATATGAGTATG+GGG | + | chr2_4:18210435-18210454 | Msa0318990:CDS | 50.0% | |
| CAGCGACGAGAAGTTGACAT+TGG | - | chr2_4:18209464-18209483 | None:intergenic | 50.0% | |
| GGTTCATTCTGCTCCTCATG+CGG | + | chr2_4:18209530-18209549 | Msa0318990:CDS | 50.0% | |
| !! | TTGTGGACCGTTGATTCCGA+TGG | - | chr2_4:18209591-18209610 | None:intergenic | 50.0% |
| ATCGGAATCAACGGTCCACA+AGG | + | chr2_4:18209590-18209609 | Msa0318990:CDS | 50.0% | |
| TTCGTTCACATCGGAACCTC+CGG | + | chr2_4:18209617-18209636 | Msa0318990:CDS | 50.0% | |
| GTAGATAGTACCTGAACCGG+AGG | - | chr2_4:18209636-18209655 | None:intergenic | 50.0% | |
| ! | ACTGATGGCGAATTCGGTCA+AGG | + | chr2_4:18209767-18209786 | Msa0318990:intron | 50.0% |
| ! | CTGATGGCGAATTCGGTCAA+GGG | + | chr2_4:18209768-18209787 | Msa0318990:intron | 50.0% |
| ! | TGATGGCGAATTCGGTCAAG+GGG | + | chr2_4:18209769-18209788 | Msa0318990:intron | 50.0% |
| !!! | TGTTTTTGAGTACGGGGCGT+AGG | + | chr2_4:18210089-18210108 | Msa0318990:CDS | 50.0% |
| ! | GCCTTTACCTTTGGTGGTTG+CGG | + | chr2_4:18210111-18210130 | Msa0318990:CDS | 50.0% |
| ACCGCAACCACCAAAGGTAA+AGG | - | chr2_4:18210115-18210134 | None:intergenic | 50.0% | |
| !! | ACCTTTGGTGGTTGCGGTTT+TGG | + | chr2_4:18210117-18210136 | Msa0318990:CDS | 50.0% |
| ACCAAAACCGCAACCACCAA+AGG | - | chr2_4:18210121-18210140 | None:intergenic | 50.0% | |
| !!! | GGTGGTTGCGGTTTTGGTTT+TGG | + | chr2_4:18210123-18210142 | Msa0318990:CDS | 50.0% |
| ! | ATGTTGCGCAAGTGTTGCCT+TGG | + | chr2_4:18210257-18210276 | Msa0318990:CDS | 50.0% |
| ! | TGTTGCGCAAGTGTTGCCTT+GGG | + | chr2_4:18210258-18210277 | Msa0318990:CDS | 50.0% |
| TGTCGAAGCCTGTTGAGAAG+AGG | + | chr2_4:18210353-18210372 | Msa0318990:CDS | 50.0% | |
| GAAGCCTGTTGAGAAGAGGA+AGG | + | chr2_4:18210357-18210376 | Msa0318990:CDS | 50.0% | |
| GGATGTTGATCAGACTGGGT+TGG | + | chr2_4:18210378-18210397 | Msa0318990:CDS | 50.0% | |
| ! | TGGGTTGGATTTGGCTGATG+TGG | + | chr2_4:18210393-18210412 | Msa0318990:CDS | 50.0% |
| CAGGAGGGGCAATATGAGTA+TGG | + | chr2_4:18210433-18210452 | Msa0318990:CDS | 50.0% | |
| GGAGGGGCAATATGAGTATG+GGG | + | chr2_4:18210435-18210454 | Msa0318990:CDS | 50.0% | |
| TGAGGAGCAGAATGAACCGC+CGG | - | chr2_4:18209528-18209547 | None:intergenic | 55.0% | |
| GGAGGTTCCGATGTGAACGA+AGG | - | chr2_4:18209618-18209637 | None:intergenic | 55.0% | |
| GCGAATTCGGTCAAGGGGAT+TGG | + | chr2_4:18209774-18209793 | Msa0318990:intron | 55.0% | |
| !! | CGGTCAAGGGGATTGGTTTC+AGG | + | chr2_4:18209781-18209800 | Msa0318990:intron | 55.0% |
| GCGTAGGCCTTTACCTTTGG+TGG | + | chr2_4:18210105-18210124 | Msa0318990:CDS | 55.0% | |
| TCGGTTGGAGGATTTGGCGA+AGG | + | chr2_4:18210171-18210190 | Msa0318990:CDS | 55.0% | |
| GTTGGAGGATTTGGCGAAGG+AGG | + | chr2_4:18210174-18210193 | Msa0318990:CDS | 55.0% | |
| ! | GTTGCGCAAGTGTTGCCTTG+GGG | + | chr2_4:18210259-18210278 | Msa0318990:CDS | 55.0% |
| ! | TTGCGCAAGTGTTGCCTTGG+GGG | + | chr2_4:18210260-18210279 | Msa0318990:CDS | 55.0% |
| TGAGGAGCAGAATGAACCGC+CGG | - | chr2_4:18209528-18209547 | None:intergenic | 55.0% | |
| GGAGGTTCCGATGTGAACGA+AGG | - | chr2_4:18209618-18209637 | None:intergenic | 55.0% | |
| GCGAATTCGGTCAAGGGGAT+TGG | + | chr2_4:18209774-18209793 | Msa0318990:intron | 55.0% | |
| !! | CGGTCAAGGGGATTGGTTTC+AGG | + | chr2_4:18209781-18209800 | Msa0318990:intron | 55.0% |
| GCGTAGGCCTTTACCTTTGG+TGG | + | chr2_4:18210105-18210124 | Msa0318990:CDS | 55.0% | |
| TCGGTTGGAGGATTTGGCGA+AGG | + | chr2_4:18210171-18210190 | Msa0318990:CDS | 55.0% | |
| GTTGGAGGATTTGGCGAAGG+AGG | + | chr2_4:18210174-18210193 | Msa0318990:CDS | 55.0% | |
| ! | GTTGCGCAAGTGTTGCCTTG+GGG | + | chr2_4:18210259-18210278 | Msa0318990:CDS | 55.0% |
| ! | TTGCGCAAGTGTTGCCTTGG+GGG | + | chr2_4:18210260-18210279 | Msa0318990:CDS | 55.0% |
| TTCGTCGTCGCGGGTGAATG+AGG | - | chr2_4:18209504-18209523 | None:intergenic | 60.0% | |
| TTCACCCGCGACGACGAAAC+CGG | + | chr2_4:18209506-18209525 | Msa0318990:CDS | 60.0% | |
| CACATCGGAACCTCCGGTTC+AGG | + | chr2_4:18209623-18209642 | Msa0318990:CDS | 60.0% | |
| GGGGCGTAGGCCTTTACCTT+TGG | + | chr2_4:18210102-18210121 | Msa0318990:CDS | 60.0% | |
| TTCGTCGTCGCGGGTGAATG+AGG | - | chr2_4:18209504-18209523 | None:intergenic | 60.0% | |
| TTCACCCGCGACGACGAAAC+CGG | + | chr2_4:18209506-18209525 | Msa0318990:CDS | 60.0% | |
| CACATCGGAACCTCCGGTTC+AGG | + | chr2_4:18209623-18209642 | Msa0318990:CDS | 60.0% | |
| GGGGCGTAGGCCTTTACCTT+TGG | + | chr2_4:18210102-18210121 | Msa0318990:CDS | 60.0% | |
| !! | AACCGCCGGTTTCGTCGTCG+CGG | - | chr2_4:18209514-18209533 | None:intergenic | 65.0% |
| !! | AACCGCCGGTTTCGTCGTCG+CGG | - | chr2_4:18209514-18209533 | None:intergenic | 65.0% |
| ACCCGCGACGACGAAACCGG+CGG | + | chr2_4:18209509-18209528 | Msa0318990:CDS | 70.0% | |
| !! | ACCGCCGGTTTCGTCGTCGC+GGG | - | chr2_4:18209513-18209532 | None:intergenic | 70.0% |
| GGGCTGTTCTGCGCCGCATG+AGG | - | chr2_4:18209546-18209565 | None:intergenic | 70.0% | |
| ACCCGCGACGACGAAACCGG+CGG | + | chr2_4:18209509-18209528 | Msa0318990:CDS | 70.0% | |
| !! | ACCGCCGGTTTCGTCGTCGC+GGG | - | chr2_4:18209513-18209532 | None:intergenic | 70.0% |
| GGGCTGTTCTGCGCCGCATG+AGG | - | chr2_4:18209546-18209565 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 18209334 | 18211062 | 18209334 | ID=Msa0318990;Name=Msa0318990 |
| chr2_4 | mRNA | 18209334 | 18211062 | 18209334 | ID=Msa0318990-mRNA-1;Parent=Msa0318990;Name=Msa0318990-mRNA-1;_AED=0.10;_eAED=0.10;_QI=130|0|0.5|1|0|0|2|0|466 |
| chr2_4 | exon | 18209334 | 18209644 | 18209334 | ID=Msa0318990-mRNA-1:exon:6808;Parent=Msa0318990-mRNA-1 |
| chr2_4 | exon | 18209843 | 18211062 | 18209843 | ID=Msa0318990-mRNA-1:exon:6809;Parent=Msa0318990-mRNA-1 |
| chr2_4 | five_prime_UTR | 18209334 | 18209463 | 18209334 | ID=Msa0318990-mRNA-1:five_prime_utr;Parent=Msa0318990-mRNA-1 |
| chr2_4 | CDS | 18209464 | 18209644 | 18209464 | ID=Msa0318990-mRNA-1:cds;Parent=Msa0318990-mRNA-1 |
| chr2_4 | CDS | 18209843 | 18211062 | 18209843 | ID=Msa0318990-mRNA-1:cds;Parent=Msa0318990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
