Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549130 | XP_013456276.1 | 83.178 | 321 | 28 | 4 | 1 | 320 | 1 | 296 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549130 | sp|Q9T072|BH025_ARATH | 47.853 | 163 | 75 | 5 | 164 | 319 | 145 | 304 | 4.36e-35 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549130 | A0A072UKT5 | 83.178 | 321 | 28 | 4 | 1 | 320 | 1 | 296 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0549130 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000370 | Msa0549130 | 0.808761 | 2.642511e-50 | -8.615850e-47 |
| Msa0002110 | Msa0549130 | -0.817174 | 3.780836e-52 | -8.615850e-47 |
| Msa0006080 | Msa0549130 | 0.824386 | 8.302346e-54 | -8.615850e-47 |
| Msa0013270 | Msa0549130 | 0.824174 | 9.311368e-54 | -8.615850e-47 |
| Msa0017300 | Msa0549130 | -0.821336 | 4.262983e-53 | -8.615850e-47 |
| Msa0017710 | Msa0549130 | 0.805785 | 1.128609e-49 | -8.615850e-47 |
| Msa0024650 | Msa0549130 | 0.801982 | 6.963998e-49 | -8.615850e-47 |
| Msa0025570 | Msa0549130 | 0.842742 | 2.147039e-58 | -8.615850e-47 |
| Msa0033220 | Msa0549130 | 0.814969 | 1.175077e-51 | -8.615850e-47 |
| Msa0037180 | Msa0549130 | 0.805801 | 1.120294e-49 | -8.615850e-47 |
| Msa0038150 | Msa0549130 | -0.806337 | 8.637372e-50 | -8.615850e-47 |
| Msa0045810 | Msa0549130 | 0.825554 | 4.400018e-54 | -8.615850e-47 |
| Msa0046200 | Msa0549130 | 0.818074 | 2.369478e-52 | -8.615850e-47 |
| Msa0047560 | Msa0549130 | -0.810227 | 1.279764e-50 | -8.615850e-47 |
| Msa0056230 | Msa0549130 | -0.801652 | 8.138495e-49 | -8.615850e-47 |
| Msa0060410 | Msa0549130 | 0.846669 | 1.878357e-59 | -8.615850e-47 |
| Msa0062190 | Msa0549130 | 0.824716 | 6.940963e-54 | -8.615850e-47 |
| Msa0065670 | Msa0549130 | -0.830771 | 2.434477e-55 | -8.615850e-47 |
| Msa0073110 | Msa0549130 | 0.842614 | 2.321572e-58 | -8.615850e-47 |
| Msa0077570 | Msa0549130 | -0.811436 | 7.007298e-51 | -8.615850e-47 |
| Msa0079880 | Msa0549130 | 0.828962 | 6.713703e-55 | -8.615850e-47 |
| Msa0080030 | Msa0549130 | 0.821450 | 4.011249e-53 | -8.615850e-47 |
| Msa0085690 | Msa0549130 | -0.829475 | 5.041027e-55 | -8.615850e-47 |
| Msa0086620 | Msa0549130 | -0.808801 | 2.590909e-50 | -8.615850e-47 |
| Msa0094560 | Msa0549130 | 0.800027 | 1.746975e-48 | -8.615850e-47 |
| Msa0095810 | Msa0549130 | -0.812842 | 3.459287e-51 | -8.615850e-47 |
| Msa0095890 | Msa0549130 | -0.810108 | 1.357917e-50 | -8.615850e-47 |
| Msa0102240 | Msa0549130 | 0.802647 | 5.080068e-49 | -8.615850e-47 |
| Msa0105590 | Msa0549130 | -0.806544 | 7.813798e-50 | -8.615850e-47 |
| Msa0106540 | Msa0549130 | 0.856727 | 2.645724e-62 | -8.615850e-47 |
| Msa0111110 | Msa0549130 | -0.800432 | 1.445580e-48 | -8.615850e-47 |
| Msa0120450 | Msa0549130 | 0.806751 | 7.063590e-50 | -8.615850e-47 |
| Msa0121320 | Msa0549130 | 0.808734 | 2.677635e-50 | -8.615850e-47 |
| Msa0122170 | Msa0549130 | -0.800946 | 1.135243e-48 | -8.615850e-47 |
| Msa0132080 | Msa0549130 | -0.802681 | 4.998717e-49 | -8.615850e-47 |
| Msa0137010 | Msa0549130 | -0.806730 | 7.138139e-50 | -8.615850e-47 |
| Msa0139500 | Msa0549130 | 0.822464 | 2.335868e-53 | -8.615850e-47 |
| Msa0141410 | Msa0549130 | 0.838190 | 3.332447e-57 | -8.615850e-47 |
| Msa0143590 | Msa0549130 | 0.805491 | 1.301206e-49 | -8.615850e-47 |
| Msa0157030 | Msa0549130 | -0.804786 | 1.827449e-49 | -8.615850e-47 |
| Msa0165640 | Msa0549130 | 0.823008 | 1.745128e-53 | -8.615850e-47 |
| Msa0177320 | Msa0549130 | 0.800512 | 1.392292e-48 | -8.615850e-47 |
| Msa0198990 | Msa0549130 | 0.864950 | 8.403744e-65 | -8.615850e-47 |
| Msa0207250 | Msa0549130 | -0.806117 | 9.612131e-50 | -8.615850e-47 |
| Msa0211460 | Msa0549130 | 0.816646 | 4.966231e-52 | -8.615850e-47 |
| Msa0212950 | Msa0549130 | -0.805635 | 1.213550e-49 | -8.615850e-47 |
| Msa0216150 | Msa0549130 | -0.800222 | 1.595115e-48 | -8.615850e-47 |
| Msa0224870 | Msa0549130 | 0.803270 | 3.776567e-49 | -8.615850e-47 |
| Msa0229350 | Msa0549130 | -0.802333 | 5.896744e-49 | -8.615850e-47 |
| Msa0234150 | Msa0549130 | 0.829256 | 5.698254e-55 | -8.615850e-47 |
| Msa0364910 | Msa0549130 | -0.810366 | 1.194494e-50 | -8.615850e-47 |
| Msa0371350 | Msa0549130 | -0.813020 | 3.162011e-51 | -8.615850e-47 |
| Msa0382020 | Msa0549130 | -0.804002 | 2.661972e-49 | -8.615850e-47 |
| Msa0386880 | Msa0549130 | 0.851664 | 7.657032e-61 | -8.615850e-47 |
| Msa0401500 | Msa0549130 | 0.813037 | 3.135296e-51 | -8.615850e-47 |
| Msa0403740 | Msa0549130 | -0.825952 | 3.539382e-54 | -8.615850e-47 |
| Msa0412580 | Msa0549130 | -0.827807 | 1.275737e-54 | -8.615850e-47 |
| Msa0428300 | Msa0549130 | -0.810622 | 1.051593e-50 | -8.615850e-47 |
| Msa0437440 | Msa0549130 | -0.813287 | 2.763194e-51 | -8.615850e-47 |
| Msa0454770 | Msa0549130 | 0.803730 | 3.031862e-49 | -8.615850e-47 |
| Msa0454990 | Msa0549130 | 0.813341 | 2.687949e-51 | -8.615850e-47 |
| Msa0456450 | Msa0549130 | -0.826661 | 2.400573e-54 | -8.615850e-47 |
| Msa0457070 | Msa0549130 | -0.825691 | 4.082182e-54 | -8.615850e-47 |
| Msa0467170 | Msa0549130 | 0.826824 | 2.194227e-54 | -8.615850e-47 |
| Msa0467330 | Msa0549130 | 0.835085 | 2.059669e-56 | -8.615850e-47 |
| Msa0469770 | Msa0549130 | -0.805813 | 1.113364e-49 | -8.615850e-47 |
| Msa0474660 | Msa0549130 | -0.816236 | 6.137342e-52 | -8.615850e-47 |
| Msa0476600 | Msa0549130 | -0.803244 | 3.823354e-49 | -8.615850e-47 |
| Msa0481670 | Msa0549130 | 0.817947 | 2.531572e-52 | -8.615850e-47 |
| Msa0240590 | Msa0549130 | -0.807946 | 3.942395e-50 | -8.615850e-47 |
| Msa0241750 | Msa0549130 | 0.869306 | 3.417886e-66 | -8.615850e-47 |
| Msa0253230 | Msa0549130 | -0.812123 | 4.967853e-51 | -8.615850e-47 |
| Msa0256540 | Msa0549130 | 0.824609 | 7.358677e-54 | -8.615850e-47 |
| Msa0258260 | Msa0549130 | 0.823699 | 1.203466e-53 | -8.615850e-47 |
| Msa0258910 | Msa0549130 | 0.801417 | 9.093647e-49 | -8.615850e-47 |
| Msa0260640 | Msa0549130 | -0.800870 | 1.176622e-48 | -8.615850e-47 |
| Msa0261350 | Msa0549130 | -0.811833 | 5.746013e-51 | -8.615850e-47 |
| Msa0267450 | Msa0549130 | -0.821762 | 3.397607e-53 | -8.615850e-47 |
| Msa0267510 | Msa0549130 | -0.827099 | 1.886552e-54 | -8.615850e-47 |
| Msa0269220 | Msa0549130 | -0.811360 | 7.279125e-51 | -8.615850e-47 |
| Msa0270730 | Msa0549130 | -0.815606 | 8.482980e-52 | -8.615850e-47 |
| Msa0276860 | Msa0549130 | 0.809990 | 1.439846e-50 | -8.615850e-47 |
| Msa0279090 | Msa0549130 | -0.806309 | 8.758677e-50 | -8.615850e-47 |
| Msa0279810 | Msa0549130 | 0.862865 | 3.744844e-64 | -8.615850e-47 |
| Msa0287480 | Msa0549130 | 0.828086 | 1.093319e-54 | -8.615850e-47 |
| Msa0290800 | Msa0549130 | 0.825003 | 5.940331e-54 | -8.615850e-47 |
| Msa0292060 | Msa0549130 | -0.807647 | 4.563321e-50 | -8.615850e-47 |
| Msa0297340 | Msa0549130 | 0.803845 | 2.869600e-49 | -8.615850e-47 |
| Msa0298400 | Msa0549130 | 0.808350 | 3.233649e-50 | -8.615850e-47 |
| Msa0299130 | Msa0549130 | -0.818787 | 1.633455e-52 | -8.615850e-47 |
| Msa0307630 | Msa0549130 | 0.818689 | 1.719075e-52 | -8.615850e-47 |
| Msa0313900 | Msa0549130 | 0.804184 | 2.439452e-49 | -8.615850e-47 |
| Msa0316000 | Msa0549130 | 0.805153 | 1.531819e-49 | -8.615850e-47 |
| Msa0319220 | Msa0549130 | 0.857945 | 1.154457e-62 | -8.615850e-47 |
| Msa0326170 | Msa0549130 | -0.812298 | 4.547747e-51 | -8.615850e-47 |
| Msa0328870 | Msa0549130 | 0.815119 | 1.088497e-51 | -8.615850e-47 |
| Msa0331070 | Msa0549130 | -0.812609 | 3.888923e-51 | -8.615850e-47 |
| Msa0334320 | Msa0549130 | 0.808885 | 2.485441e-50 | -8.615850e-47 |
| Msa0340700 | Msa0549130 | -0.813175 | 2.923490e-51 | -8.615850e-47 |
| Msa0354600 | Msa0549130 | 0.815962 | 7.063471e-52 | -8.615850e-47 |
| Msa0362170 | Msa0549130 | 0.807193 | 5.697558e-50 | -8.615850e-47 |
| Msa0364030 | Msa0549130 | -0.826146 | 3.184082e-54 | -8.615850e-47 |
| Msa0483980 | Msa0549130 | -0.801446 | 8.969859e-49 | -8.615850e-47 |
| Msa0501080 | Msa0549130 | 0.812492 | 4.126070e-51 | -8.615850e-47 |
| Msa0510050 | Msa0549130 | 0.801075 | 1.068165e-48 | -8.615850e-47 |
| Msa0519070 | Msa0549130 | -0.809193 | 2.135255e-50 | -8.615850e-47 |
| Msa0525180 | Msa0549130 | -0.804209 | 2.410866e-49 | -8.615850e-47 |
| Msa0546590 | Msa0549130 | 0.813310 | 2.731094e-51 | -8.615850e-47 |
| Msa0549130 | Msa0549170 | 0.824697 | 7.015437e-54 | -8.615850e-47 |
| Msa0549130 | Msa0549960 | 0.835424 | 1.691696e-56 | -8.615850e-47 |
| Msa0549130 | Msa0560950 | 0.800074 | 1.709333e-48 | -8.615850e-47 |
| Msa0549130 | Msa0566280 | 0.854167 | 1.474040e-61 | -8.615850e-47 |
| Msa0549130 | Msa0567330 | 0.847186 | 1.355643e-59 | -8.615850e-47 |
| Msa0549130 | Msa0567570 | 0.832993 | 6.884632e-56 | -8.615850e-47 |
| Msa0549130 | Msa0576320 | 0.837637 | 4.620847e-57 | -8.615850e-47 |
| Msa0549130 | Msa0580410 | -0.801328 | 9.484616e-49 | -8.615850e-47 |
| Msa0549130 | Msa0580890 | -0.800488 | 1.408052e-48 | -8.615850e-47 |
| Msa0549130 | Msa0581350 | 0.809123 | 2.210946e-50 | -8.615850e-47 |
| Msa0549130 | Msa0582270 | -0.806014 | 1.010287e-49 | -8.615850e-47 |
| Msa0549130 | Msa0590620 | -0.807830 | 4.173668e-50 | -8.615850e-47 |
| Msa0549130 | Msa0604190 | 0.891677 | 3.193759e-74 | -8.615850e-47 |
| Msa0549130 | Msa0606600 | 0.817402 | 3.360246e-52 | -8.615850e-47 |
| Msa0549130 | Msa0610700 | -0.830941 | 2.210903e-55 | -8.615850e-47 |
| Msa0549130 | Msa0615070 | 0.837752 | 4.319173e-57 | -8.615850e-47 |
| Msa0549130 | Msa0638300 | -0.816783 | 4.627271e-52 | -8.615850e-47 |
| Msa0549130 | Msa0643230 | 0.801187 | 1.013680e-48 | -8.615850e-47 |
| Msa0549130 | Msa0645370 | 0.834417 | 3.034606e-56 | -8.615850e-47 |
| Msa0549130 | Msa0645390 | 0.897455 | 1.383333e-76 | -8.615850e-47 |
| Msa0549130 | Msa0646010 | 0.836218 | 1.064558e-56 | -8.615850e-47 |
| Msa0549130 | Msa0646430 | 0.845230 | 4.624466e-59 | -8.615850e-47 |
| Msa0549130 | Msa0647300 | 0.814205 | 1.734693e-51 | -8.615850e-47 |
| Msa0549130 | Msa0649250 | -0.813536 | 2.435616e-51 | -8.615850e-47 |
| Msa0549130 | Msa0657710 | 0.815618 | 8.430444e-52 | -8.615850e-47 |
| Msa0549130 | Msa0682110 | 0.823289 | 1.501091e-53 | -8.615850e-47 |
| Msa0549130 | Msa0682160 | 0.830853 | 2.324074e-55 | -8.615850e-47 |
| Msa0549130 | Msa0684030 | -0.804248 | 2.366227e-49 | -8.615850e-47 |
| Msa0549130 | Msa0685020 | 0.909730 | 4.123334e-82 | -8.615850e-47 |
| Msa0549130 | Msa0686040 | 0.822833 | 1.917379e-53 | -8.615850e-47 |
| Msa0549130 | Msa0686830 | 0.816347 | 5.794814e-52 | -8.615850e-47 |
| Msa0549130 | Msa0702690 | -0.804154 | 2.474786e-49 | -8.615850e-47 |
| Msa0549130 | Msa0702800 | 0.823090 | 1.670318e-53 | -8.615850e-47 |
| Msa0549130 | Msa0707330 | 0.835639 | 1.492242e-56 | -8.615850e-47 |
| Msa0549130 | Msa0712880 | 0.813773 | 2.159806e-51 | -8.615850e-47 |
| Msa0549130 | Msa0719270 | 0.809165 | 2.164899e-50 | -8.615850e-47 |
| Msa0549130 | Msa0719330 | -0.806920 | 6.505950e-50 | -8.615850e-47 |
| Msa0549130 | Msa0719750 | 0.813436 | 2.561570e-51 | -8.615850e-47 |
| Msa0549130 | Msa0725580 | 0.800820 | 1.204355e-48 | -8.615850e-47 |
| Msa0549130 | Msa0732970 | 0.818910 | 1.531371e-52 | -8.615850e-47 |
| Msa0549130 | Msa0735010 | 0.806995 | 6.273857e-50 | -8.615850e-47 |
| Msa0549130 | Msa0745140 | 0.834711 | 2.558873e-56 | -8.615850e-47 |
| Msa0549130 | Msa0754020 | -0.806974 | 6.337568e-50 | -8.615850e-47 |
| Msa0549130 | Msa0755880 | 0.822487 | 2.307511e-53 | -8.615850e-47 |
| Msa0549130 | Msa0758880 | -0.815265 | 1.010334e-51 | -8.615850e-47 |
| Msa0549130 | Msa0758990 | 0.803048 | 4.199073e-49 | -8.615850e-47 |
| Msa0549130 | Msa0769910 | -0.809760 | 1.613382e-50 | -8.615850e-47 |
| Msa0549130 | Msa0772160 | -0.806512 | 7.935527e-50 | -8.615850e-47 |
| Msa0549130 | Msa0773960 | 0.834232 | 3.376831e-56 | -8.615850e-47 |
| Msa0549130 | Msa0775660 | 0.805895 | 1.070537e-49 | -8.615850e-47 |
| Msa0549130 | Msa0776640 | 0.837834 | 4.114418e-57 | -8.615850e-47 |
| Msa0549130 | Msa0790650 | -0.837593 | 4.744253e-57 | -8.615850e-47 |
| Msa0549130 | Msa0792410 | 0.814195 | 1.743709e-51 | -8.615850e-47 |
| Msa0549130 | Msa0795910 | -0.801030 | 1.091407e-48 | -8.615850e-47 |
| Msa0549130 | Msa0797580 | 0.811544 | 6.637955e-51 | -8.615850e-47 |
| Msa0549130 | Msa0800120 | 0.810090 | 1.370276e-50 | -8.615850e-47 |
| Msa0549130 | Msa0801920 | -0.818107 | 2.329001e-52 | -8.615850e-47 |
| Msa0549130 | Msa0807100 | -0.807029 | 6.171459e-50 | -8.615850e-47 |
| Msa0549130 | Msa0813160 | 0.803117 | 4.062260e-49 | -8.615850e-47 |
| Msa0549130 | Msa0825920 | 0.841777 | 3.868389e-58 | -8.615850e-47 |
| Msa0549130 | Msa0828960 | 0.823113 | 1.649947e-53 | -8.615850e-47 |
| Msa0549130 | Msa0829250 | -0.806633 | 7.483317e-50 | -8.615850e-47 |
| Msa0549130 | Msa0833030 | -0.804992 | 1.655039e-49 | -8.615850e-47 |
| Msa0549130 | Msa0833200 | -0.811583 | 6.510467e-51 | -8.615850e-47 |
| Msa0549130 | Msa0838120 | -0.818241 | 2.172121e-52 | -8.615850e-47 |
| Msa0549130 | Msa0838210 | 0.820899 | 5.374903e-53 | -8.615850e-47 |
| Msa0549130 | Msa0840520 | 0.802479 | 5.502003e-49 | -8.615850e-47 |
| Msa0549130 | Msa0841050 | 0.808124 | 3.613186e-50 | -8.615850e-47 |
| Msa0549130 | Msa0842750 | 0.808086 | 3.681407e-50 | -8.615850e-47 |
| Msa0549130 | Msa0853200 | -0.809338 | 1.988369e-50 | -8.615850e-47 |
| Msa0549130 | Msa0865420 | 0.829559 | 4.810708e-55 | -8.615850e-47 |
| Msa0549130 | Msa0880910 | 0.823207 | 1.568296e-53 | -8.615850e-47 |
| Msa0549130 | Msa0898970 | 0.801855 | 7.395622e-49 | -8.615850e-47 |
| Msa0549130 | Msa0900330 | 0.840947 | 6.398003e-58 | -8.615850e-47 |
| Msa0549130 | Msa0908270 | -0.812015 | 5.243612e-51 | -8.615850e-47 |
| Msa0549130 | Msa0908280 | -0.819700 | 1.011773e-52 | -8.615850e-47 |
| Msa0549130 | Msa0908350 | -0.817678 | 2.911348e-52 | -8.615850e-47 |
| Msa0549130 | Msa0908500 | -0.819081 | 1.400506e-52 | -8.615850e-47 |
| Msa0549130 | Msa0909260 | 0.829342 | 5.430191e-55 | -8.615850e-47 |
| Msa0549130 | Msa0910170 | 0.843770 | 1.141948e-58 | -8.615850e-47 |
| Msa0549130 | Msa0928450 | 0.855340 | 6.737937e-62 | -8.615850e-47 |
| Msa0549130 | Msa0931680 | 0.824616 | 7.329387e-54 | -8.615850e-47 |
| Msa0549130 | Msa0935840 | -0.800670 | 1.292266e-48 | -8.615850e-47 |
| Msa0549130 | Msa0941150 | -0.811328 | 7.397743e-51 | -8.615850e-47 |
| Msa0549130 | Msa0945030 | 0.833477 | 5.214329e-56 | -8.615850e-47 |
| Msa0549130 | Msa0964400 | -0.822871 | 1.878155e-53 | -8.615850e-47 |
| Msa0549130 | Msa0965950 | 0.812053 | 5.143373e-51 | -8.615850e-47 |
| Msa0549130 | Msa0967780 | 0.836371 | 9.734658e-57 | -8.615850e-47 |
| Msa0549130 | Msa0973010 | -0.822097 | 2.842316e-53 | -8.615850e-47 |
| Msa0549130 | Msa0984520 | 0.807406 | 5.134312e-50 | -8.615850e-47 |
| Msa0549130 | Msa0998660 | -0.814054 | 1.872464e-51 | -8.615850e-47 |
| Msa0549130 | Msa1000480 | 0.822068 | 2.886622e-53 | -8.615850e-47 |
| Msa0549130 | Msa1002820 | 0.800949 | 1.133877e-48 | -8.615850e-47 |
| Msa0549130 | Msa1013190 | 0.810961 | 8.883601e-51 | -8.615850e-47 |
| Msa0549130 | Msa1022420 | 0.828498 | 8.695829e-55 | -8.615850e-47 |
| Msa0549130 | Msa1028890 | -0.802352 | 5.844754e-49 | -8.615850e-47 |
| Msa0549130 | Msa1029780 | 0.821874 | 3.201002e-53 | -8.615850e-47 |
| Msa0549130 | Msa1029820 | 0.847753 | 9.475620e-60 | -8.615850e-47 |
| Msa0549130 | Msa1029840 | 0.843396 | 1.437705e-58 | -8.615850e-47 |
| Msa0549130 | Msa1036260 | -0.803994 | 2.672943e-49 | -8.615850e-47 |
| Msa0549130 | Msa1042300 | 0.812480 | 4.150771e-51 | -8.615850e-47 |
| Msa0549130 | Msa1044050 | -0.808329 | 3.266762e-50 | -8.615850e-47 |
| Msa0549130 | Msa1068710 | 0.807828 | 4.177373e-50 | -8.615850e-47 |
| Msa0549130 | Msa1068730 | 0.811113 | 8.233195e-51 | -8.615850e-47 |
| Msa0549130 | Msa1068940 | 0.853202 | 2.792368e-61 | -8.615850e-47 |
| Msa0549130 | Msa1068950 | 0.823716 | 1.192117e-53 | -8.615850e-47 |
| Msa0549130 | Msa1068960 | 0.807958 | 3.918827e-50 | -8.615850e-47 |
| Msa0549130 | Msa1076280 | 0.824322 | 8.595888e-54 | -8.615850e-47 |
| Msa0549130 | Msa1078760 | -0.803770 | 2.974307e-49 | -8.615850e-47 |
| Msa0549130 | Msa1079820 | 0.807966 | 3.903628e-50 | -8.615850e-47 |
| Msa0549130 | Msa1087080 | -0.811155 | 8.063026e-51 | -8.615850e-47 |
| Msa0549130 | Msa1088740 | -0.825595 | 4.303805e-54 | -8.615850e-47 |
| Msa0549130 | Msa1106730 | -0.822866 | 1.883451e-53 | -8.615850e-47 |
| Msa0549130 | Msa1111910 | 0.830466 | 2.890351e-55 | -8.615850e-47 |
| Msa0549130 | Msa1115600 | 0.828331 | 9.542410e-55 | -8.615850e-47 |
| Msa0549130 | Msa1121720 | -0.800174 | 1.630811e-48 | -8.615850e-47 |
| Msa0549130 | Msa1122710 | -0.800578 | 1.349298e-48 | -8.615850e-47 |
| Msa0549130 | Msa1129120 | -0.802881 | 4.544676e-49 | -8.615850e-47 |
| Msa0549130 | Msa1132880 | -0.802468 | 5.530222e-49 | -8.615850e-47 |
| Msa0549130 | Msa1147010 | 0.804775 | 1.837260e-49 | -8.615850e-47 |
| Msa0549130 | Msa1149910 | 0.835200 | 1.926825e-56 | -8.615850e-47 |
| Msa0549130 | Msa1154320 | 0.810227 | 1.279764e-50 | -8.615850e-47 |
| Msa0549130 | Msa1156710 | 0.846701 | 1.840446e-59 | -8.615850e-47 |
| Msa0549130 | Msa1156720 | 0.838957 | 2.111274e-57 | -8.615850e-47 |
| Msa0549130 | Msa1156730 | 0.825155 | 5.470047e-54 | -8.615850e-47 |
| Msa0549130 | Msa1165460 | 0.820249 | 7.576956e-53 | -8.615850e-47 |
| Msa0549130 | Msa1167960 | 0.800137 | 1.659678e-48 | -8.615850e-47 |
| Msa0549130 | Msa1179160 | 0.805324 | 1.410339e-49 | -8.615850e-47 |
| Msa0549130 | Msa1184680 | 0.815515 | 8.888514e-52 | -8.615850e-47 |
| Msa0549130 | Msa1190350 | -0.811663 | 6.254683e-51 | -8.615850e-47 |
| Msa0549130 | Msa1191530 | -0.827753 | 1.314129e-54 | -8.615850e-47 |
| Msa0549130 | Msa1192360 | 0.856087 | 4.076496e-62 | -8.615850e-47 |
| Msa0549130 | Msa1193940 | 0.803267 | 3.781508e-49 | -8.615850e-47 |
| Msa0549130 | Msa1199540 | -0.802706 | 4.939841e-49 | -8.615850e-47 |
| Msa0549130 | Msa1203650 | 0.809995 | 1.436229e-50 | -8.615850e-47 |
| Msa0549130 | Msa1204870 | -0.801812 | 7.545450e-49 | -8.615850e-47 |
| Msa0549130 | Msa1204900 | -0.803122 | 4.052780e-49 | -8.615850e-47 |
| Msa0549130 | Msa1205270 | -0.827445 | 1.558347e-54 | -8.615850e-47 |
| Msa0549130 | Msa1206920 | 0.811958 | 5.396870e-51 | -8.615850e-47 |
| Msa0549130 | Msa1209990 | -0.802864 | 4.581295e-49 | -8.615850e-47 |
| Msa0549130 | Msa1215220 | -0.808244 | 3.405963e-50 | -8.615850e-47 |
| Msa0549130 | Msa1217890 | 0.805058 | 1.603236e-49 | -8.615850e-47 |
| Msa0549130 | Msa1223990 | 0.801589 | 8.384645e-49 | -8.615850e-47 |
| Msa0549130 | Msa1233660 | 0.802460 | 5.552360e-49 | -8.615850e-47 |
| Msa0549130 | Msa1240490 | 0.811957 | 5.399621e-51 | -8.615850e-47 |
| Msa0549130 | Msa1242160 | 0.810231 | 1.277718e-50 | -8.615850e-47 |
| Msa0549130 | Msa1246830 | 0.819147 | 1.353171e-52 | -8.615850e-47 |
| Msa0549130 | Msa1250660 | 0.818154 | 2.272393e-52 | -8.615850e-47 |
| Msa0549130 | Msa1253520 | 0.800564 | 1.358407e-48 | -8.615850e-47 |
| Msa0549130 | Msa1255030 | -0.828936 | 6.813467e-55 | -8.615850e-47 |
| Msa0549130 | Msa1256490 | -0.802875 | 4.557820e-49 | -8.615850e-47 |
| Msa0549130 | Msa1257200 | 0.816022 | 6.851610e-52 | -8.615850e-47 |
| Msa0549130 | Msa1263110 | 0.812645 | 3.820733e-51 | -8.615850e-47 |
| Msa0549130 | Msa1266120 | -0.827184 | 1.799904e-54 | -8.615850e-47 |
| Msa0549130 | Msa1268360 | 0.816922 | 4.307469e-52 | -8.615850e-47 |
| Msa0549130 | Msa1270860 | -0.800412 | 1.458558e-48 | -8.615850e-47 |
| Msa0549130 | Msa1273320 | 0.800668 | 1.293536e-48 | -8.615850e-47 |
| Msa0549130 | Msa1283930 | 0.818054 | 2.394883e-52 | -8.615850e-47 |
| Msa0549130 | Msa1284020 | 0.843849 | 1.088028e-58 | -8.615850e-47 |
| Msa0549130 | Msa1286860 | -0.829181 | 5.943645e-55 | -8.615850e-47 |
| Msa0549130 | Msa1288070 | 0.844130 | 9.147365e-59 | -8.615850e-47 |
| Msa0549130 | Msa1295210 | -0.830079 | 3.594351e-55 | -8.615850e-47 |
| Msa0549130 | Msa1295480 | -0.845778 | 3.283852e-59 | -8.615850e-47 |
| Msa0549130 | Msa1297220 | -0.825336 | 4.955403e-54 | -8.615850e-47 |
| Msa0549130 | Msa1297460 | 0.810016 | 1.421281e-50 | -8.615850e-47 |
| Msa0549130 | Msa1298480 | -0.801859 | 7.379107e-49 | -8.615850e-47 |
| Msa0549130 | Msa1314030 | 0.800685 | 1.283680e-48 | -8.615850e-47 |
| Msa0549130 | Msa1322960 | 0.823684 | 1.213014e-53 | -8.615850e-47 |
| Msa0549130 | Msa1322980 | 0.826972 | 2.022419e-54 | -8.615850e-47 |
| Msa0549130 | Msa1323070 | 0.806639 | 7.459583e-50 | -8.615850e-47 |
| Msa0549130 | Msa1323260 | -0.805945 | 1.044694e-49 | -8.615850e-47 |
| Msa0549130 | Msa1331570 | -0.807609 | 4.649037e-50 | -8.615850e-47 |
| Msa0549130 | Msa1341710 | -0.802195 | 6.296107e-49 | -8.615850e-47 |
| Msa0549130 | Msa1342360 | -0.827659 | 1.384950e-54 | -8.615850e-47 |
| Msa0549130 | Msa1354370 | -0.812470 | 4.171034e-51 | -8.615850e-47 |
| Msa0549130 | Msa1354780 | -0.801159 | 1.027130e-48 | -8.615850e-47 |
| Msa0549130 | Msa1361980 | 0.831169 | 1.943613e-55 | -8.615850e-47 |
| Msa0549130 | Msa1365820 | 0.825223 | 5.269576e-54 | -8.615850e-47 |
| Msa0549130 | Msa1366140 | -0.814530 | 1.470429e-51 | -8.615850e-47 |
| Msa0549130 | Msa1368390 | 0.849503 | 3.101635e-60 | -8.615850e-47 |
| Msa0549130 | Msa1372000 | 0.807913 | 4.007571e-50 | -8.615850e-47 |
| Msa0549130 | Msa1376880 | 0.803087 | 4.120554e-49 | -8.615850e-47 |
| Msa0549130 | Msa1387450 | -0.817434 | 3.304543e-52 | -8.615850e-47 |
| Msa0549130 | Msa1388720 | -0.803577 | 3.261909e-49 | -8.615850e-47 |
| Msa0549130 | Msa1396200 | -0.804007 | 2.656446e-49 | -8.615850e-47 |
| Msa0549130 | Msa1405830 | 0.856354 | 3.405501e-62 | -8.615850e-47 |
| Msa0549130 | Msa1407810 | 0.841768 | 3.890300e-58 | -8.615850e-47 |
| Msa0549130 | Msa1408860 | -0.807333 | 5.320213e-50 | -8.615850e-47 |
| Msa0549130 | Msa1412330 | -0.810613 | 1.056412e-50 | -8.615850e-47 |
| Msa0549130 | Msa1413130 | 0.814455 | 1.527550e-51 | -8.615850e-47 |
| Msa0549130 | Msa1414780 | -0.808025 | 3.792451e-50 | -8.615850e-47 |
| Msa0549130 | Msa1422860 | 0.845257 | 4.546564e-59 | -8.615850e-47 |
| Msa0549130 | Msa1433040 | 0.807289 | 5.435468e-50 | -8.615850e-47 |
| Msa0549130 | Msa1433360 | 0.844989 | 5.372205e-59 | -8.615850e-47 |
| Msa0549130 | Msa1436400 | 0.805253 | 1.459231e-49 | -8.615850e-47 |
| Msa0549130 | Msa1436620 | 0.801580 | 8.420678e-49 | -8.615850e-47 |
| Msa0549130 | Msa1437780 | 0.841703 | 4.045320e-58 | -8.615850e-47 |
| Msa0549130 | Msa1445530 | 0.823452 | 1.374720e-53 | -8.615850e-47 |
| Msa0549130 | Msa1455360 | 0.832239 | 1.059064e-55 | -8.615850e-47 |
| Msa0549130 | Msa1457770 | 0.812707 | 3.703238e-51 | -8.615850e-47 |
| Msa0549130 | Msa1461770 | 0.822187 | 2.709014e-53 | -8.615850e-47 |
| Msa0549130 | Msa1462610 | 0.816437 | 5.532443e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549130 | MtrunA17_Chr4g0033391 | 83.178 | 321 | 28 | 4 | 1 | 320 | 1 | 296 | 0.0 | 521 |
| Msa0549130 | MtrunA17_Chr4g0033281 | 88.438 | 320 | 18 | 3 | 1 | 320 | 1 | 301 | 0.0 | 521 |
| Msa0549130 | MtrunA17_Chr4g0033291 | 82.919 | 322 | 35 | 4 | 1 | 320 | 1 | 304 | 0.0 | 506 |
| Msa0549130 | MtrunA17_Chr2g0307131 | 65.143 | 350 | 73 | 7 | 1 | 320 | 1 | 331 | 3.14e-140 | 400 |
| Msa0549130 | MtrunA17_Chr6g0468491 | 65.909 | 308 | 76 | 8 | 23 | 320 | 1 | 289 | 8.46e-131 | 375 |
| Msa0549130 | MtrunA17_Chr2g0307141 | 63.714 | 350 | 82 | 7 | 1 | 320 | 1 | 335 | 3.22e-129 | 373 |
| Msa0549130 | MtrunA17_Chr6g0468461 | 57.225 | 346 | 91 | 9 | 1 | 322 | 1 | 313 | 9.49e-113 | 331 |
| Msa0549130 | MtrunA17_Chr7g0225901 | 57.655 | 307 | 64 | 7 | 23 | 325 | 1 | 245 | 1.29e-105 | 309 |
| Msa0549130 | MtrunA17_Chr4g0054581 | 53.719 | 363 | 116 | 8 | 1 | 320 | 1 | 354 | 1.18e-102 | 306 |
| Msa0549130 | MtrunA17_Chr4g0054621 | 47.246 | 345 | 129 | 11 | 1 | 320 | 1 | 317 | 3.23e-81 | 250 |
| Msa0549130 | MtrunA17_Chr5g0400621 | 43.750 | 320 | 134 | 13 | 17 | 320 | 20 | 309 | 7.56e-57 | 187 |
| Msa0549130 | MtrunA17_Chr5g0400641 | 54.545 | 154 | 59 | 4 | 174 | 320 | 1 | 150 | 3.19e-42 | 144 |
| Msa0549130 | MtrunA17_Chr4g0054561 | 38.525 | 244 | 125 | 6 | 97 | 320 | 67 | 305 | 3.95e-40 | 143 |
| Msa0549130 | MtrunA17_Chr4g0054551 | 38.115 | 244 | 126 | 6 | 97 | 320 | 67 | 305 | 4.72e-40 | 143 |
| Msa0549130 | MtrunA17_Chr5g0400661 | 34.940 | 332 | 168 | 11 | 13 | 320 | 7 | 314 | 1.00e-39 | 142 |
| Msa0549130 | MtrunA17_Chr2g0280161 | 44.385 | 187 | 93 | 3 | 138 | 320 | 151 | 330 | 2.56e-38 | 139 |
| Msa0549130 | MtrunA17_Chr2g0333641 | 36.981 | 265 | 143 | 8 | 60 | 320 | 43 | 287 | 2.90e-37 | 135 |
| Msa0549130 | MtrunA17_Chr2g0333621 | 39.171 | 217 | 120 | 4 | 109 | 320 | 82 | 291 | 6.11e-37 | 134 |
| Msa0549130 | MtrunA17_Chr8g0336681 | 38.938 | 226 | 112 | 5 | 109 | 320 | 102 | 315 | 1.84e-36 | 134 |
| Msa0549130 | MtrunA17_Chr5g0400671 | 42.458 | 179 | 98 | 2 | 146 | 320 | 126 | 303 | 2.98e-36 | 133 |
| Msa0549130 | MtrunA17_Chr4g0049331 | 36.929 | 241 | 134 | 5 | 92 | 320 | 53 | 287 | 7.48e-36 | 131 |
| Msa0549130 | MtrunA17_Chr4g0054571 | 48.780 | 164 | 72 | 4 | 168 | 320 | 147 | 309 | 4.66e-35 | 130 |
| Msa0549130 | MtrunA17_Chr4g0002801 | 40.513 | 195 | 100 | 6 | 140 | 320 | 118 | 310 | 7.76e-35 | 129 |
| Msa0549130 | MtrunA17_Chr4g0002781 | 36.797 | 231 | 121 | 5 | 102 | 320 | 112 | 329 | 9.55e-35 | 129 |
| Msa0549130 | MtrunA17_Chr7g0249811 | 38.743 | 191 | 108 | 3 | 130 | 320 | 127 | 308 | 4.04e-31 | 119 |
| Msa0549130 | MtrunA17_Chr2g0333541 | 43.787 | 169 | 86 | 4 | 160 | 320 | 81 | 248 | 5.97e-29 | 112 |
| Msa0549130 | MtrunA17_Chr2g0333611 | 39.535 | 172 | 85 | 6 | 160 | 320 | 32 | 195 | 1.06e-28 | 110 |
| Msa0549130 | MtrunA17_Chr8g0346161 | 30.108 | 186 | 115 | 5 | 143 | 321 | 263 | 440 | 5.71e-18 | 84.3 |
| Msa0549130 | MtrunA17_Chr1g0185621 | 31.250 | 144 | 84 | 2 | 171 | 301 | 475 | 616 | 3.81e-17 | 82.4 |
| Msa0549130 | MtrunA17_Chr8g0366751 | 31.138 | 167 | 91 | 2 | 162 | 304 | 443 | 609 | 5.12e-17 | 82.0 |
| Msa0549130 | MtrunA17_Chr4g0002831 | 33.775 | 151 | 86 | 5 | 173 | 320 | 45 | 184 | 1.34e-15 | 74.3 |
| Msa0549130 | MtrunA17_Chr5g0411341 | 31.138 | 167 | 97 | 3 | 156 | 304 | 474 | 640 | 1.96e-15 | 77.0 |
| Msa0549130 | MtrunA17_Chr7g0233441 | 33.582 | 134 | 68 | 2 | 194 | 320 | 57 | 176 | 5.21e-15 | 72.8 |
| Msa0549130 | MtrunA17_Chr8g0365711 | 26.596 | 188 | 118 | 5 | 142 | 317 | 219 | 398 | 2.16e-14 | 73.6 |
| Msa0549130 | MtrunA17_Chr8g0346151 | 29.605 | 152 | 73 | 4 | 155 | 277 | 246 | 392 | 2.76e-14 | 73.2 |
| Msa0549130 | MtrunA17_Chr7g0275821 | 30.323 | 155 | 99 | 3 | 167 | 317 | 244 | 393 | 3.89e-14 | 72.8 |
| Msa0549130 | MtrunA17_Chr4g0002851 | 32.450 | 151 | 70 | 4 | 178 | 320 | 50 | 176 | 5.86e-14 | 69.7 |
| Msa0549130 | MtrunA17_Chr7g0260841 | 34.234 | 111 | 63 | 1 | 138 | 238 | 312 | 422 | 1.80e-13 | 70.9 |
| Msa0549130 | MtrunA17_Chr3g0131691 | 27.485 | 171 | 111 | 2 | 157 | 314 | 284 | 454 | 6.40e-13 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549130 | AT4G37850.2 | 47.853 | 163 | 75 | 5 | 164 | 319 | 145 | 304 | 4.43e-36 | 133 |
| Msa0549130 | AT4G37850.1 | 47.853 | 163 | 75 | 5 | 164 | 319 | 145 | 304 | 4.43e-36 | 133 |
| Msa0549130 | AT2G22760.2 | 40.476 | 168 | 94 | 2 | 160 | 321 | 108 | 275 | 3.41e-34 | 127 |
| Msa0549130 | AT2G22760.1 | 40.120 | 167 | 94 | 2 | 160 | 320 | 108 | 274 | 6.22e-33 | 124 |
| Msa0549130 | AT2G22750.1 | 45.349 | 172 | 84 | 4 | 157 | 319 | 111 | 281 | 6.18e-31 | 119 |
| Msa0549130 | AT2G22750.2 | 45.349 | 172 | 84 | 4 | 157 | 319 | 111 | 281 | 6.71e-31 | 119 |
| Msa0549130 | AT2G22750.4 | 45.349 | 172 | 84 | 4 | 157 | 319 | 139 | 309 | 6.82e-31 | 119 |
| Msa0549130 | AT2G22750.5 | 45.349 | 172 | 84 | 4 | 157 | 319 | 135 | 305 | 6.93e-31 | 119 |
| Msa0549130 | AT2G22750.3 | 45.349 | 172 | 84 | 4 | 157 | 319 | 139 | 309 | 7.94e-31 | 119 |
| Msa0549130 | AT2G22770.1 | 37.278 | 169 | 88 | 1 | 170 | 320 | 131 | 299 | 1.97e-27 | 109 |
| Msa0549130 | AT4G17880.1 | 32.558 | 215 | 109 | 5 | 114 | 304 | 350 | 552 | 5.30e-20 | 91.3 |
| Msa0549130 | AT5G46760.1 | 35.542 | 166 | 85 | 6 | 156 | 301 | 396 | 559 | 2.40e-19 | 89.4 |
| Msa0549130 | AT1G32640.1 | 33.544 | 158 | 97 | 4 | 155 | 304 | 432 | 589 | 4.56e-17 | 82.4 |
| Msa0549130 | AT2G46510.1 | 47.297 | 74 | 29 | 1 | 163 | 226 | 377 | 450 | 1.60e-14 | 74.7 |
| Msa0549130 | AT1G01260.1 | 37.143 | 105 | 63 | 1 | 161 | 262 | 420 | 524 | 2.46e-14 | 74.3 |
| Msa0549130 | AT1G01260.2 | 37.143 | 105 | 63 | 1 | 161 | 262 | 420 | 524 | 2.46e-14 | 74.3 |
| Msa0549130 | AT1G01260.3 | 37.143 | 105 | 63 | 1 | 161 | 262 | 420 | 524 | 2.46e-14 | 74.3 |
| Msa0549130 | AT4G16430.1 | 39.216 | 102 | 58 | 1 | 156 | 253 | 301 | 402 | 2.98e-14 | 73.6 |
| Msa0549130 | AT4G09820.1 | 30.769 | 130 | 73 | 1 | 160 | 289 | 352 | 464 | 4.40e-13 | 70.1 |
| Msa0549130 | AT5G46830.1 | 41.667 | 96 | 42 | 2 | 167 | 248 | 335 | 430 | 1.05e-12 | 68.9 |
| Msa0549130 | AT4G00870.1 | 34.188 | 117 | 65 | 2 | 172 | 279 | 250 | 363 | 1.84e-12 | 68.2 |
| Msa0549130 | AT5G41315.3 | 29.310 | 174 | 92 | 6 | 171 | 316 | 446 | 616 | 1.85e-11 | 65.5 |
| Msa0549130 | AT5G41315.1 | 29.310 | 174 | 92 | 6 | 171 | 316 | 441 | 611 | 1.96e-11 | 65.5 |
| Msa0549130 | AT5G41315.2 | 29.310 | 174 | 92 | 6 | 171 | 316 | 449 | 619 | 2.03e-11 | 65.5 |
| Msa0549130 | AT1G63650.3 | 27.219 | 169 | 97 | 4 | 171 | 316 | 405 | 570 | 8.43e-11 | 63.5 |
| Msa0549130 | AT1G63650.1 | 27.219 | 169 | 97 | 4 | 171 | 316 | 405 | 570 | 8.43e-11 | 63.5 |
| Msa0549130 | AT1G63650.2 | 27.219 | 169 | 97 | 4 | 171 | 316 | 405 | 570 | 8.43e-11 | 63.5 |
Find 48 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGTTTAATGGCAATTTAA+AGG | 0.241233 | 4_1:+43929973 | None:intergenic |
| CAGCAGCTGGTTAACTGATT+TGG | 0.268145 | 4_1:-43934421 | Msa0549130:intron |
| CAAGTGGAAGCAAGAGTATT+AGG | 0.274085 | 4_1:-43930159 | Msa0549130:CDS |
| TCTTGTTCCTAACCTTAAAA+AGG | 0.274757 | 4_1:-43933580 | Msa0549130:intron |
| ATTGATGATACTTTCATTGC+TGG | 0.287035 | 4_1:+43934444 | None:intergenic |
| TCAAGAGCACAAGGGGCTTT+TGG | 0.303932 | 4_1:-43930109 | Msa0549130:CDS |
| CATCAGCATCAAGGAAATTC+AGG | 0.324134 | 4_1:+43934054 | None:intergenic |
| GATGGTGATGGAGAAATATT+TGG | 0.350142 | 4_1:+43933876 | None:intergenic |
| CTGCAAGAGCAATGAAGGTT+TGG | 0.363766 | 4_1:+43933604 | None:intergenic |
| ATCAGTGTCTCCAACCGAAT+TGG | 0.364748 | 4_1:-43933769 | Msa0549130:CDS |
| ACTCTTGCTTCCACTTGAAA+TGG | 0.401306 | 4_1:+43930165 | None:intergenic |
| ATCGCTGCATAGGCATGGTT+TGG | 0.409003 | 4_1:+43930236 | None:intergenic |
| TTTAATGGCAATTTAAAGGA+TGG | 0.412231 | 4_1:+43929977 | None:intergenic |
| AATAGCAGTGTCTTACCCTT+TGG | 0.414898 | 4_1:-43930042 | Msa0549130:CDS |
| TAGGAAAACAAATGTTGATT+CGG | 0.415655 | 4_1:-43930140 | Msa0549130:CDS |
| TGCAAGAGCAATGAAGGTTT+GGG | 0.438568 | 4_1:+43933605 | None:intergenic |
| CAAACAACAATGTTTAACTC+TGG | 0.449913 | 4_1:-43933982 | Msa0549130:CDS |
| AAAGAGGAGTTAGATGGTGA+TGG | 0.464747 | 4_1:+43933864 | None:intergenic |
| AAACAACAATGTTTAACTCT+GGG | 0.467228 | 4_1:-43933981 | Msa0549130:CDS |
| TTGATGATACTTTCATTGCT+GGG | 0.467665 | 4_1:+43934445 | None:intergenic |
| TGACTTGCTGAGATTATTTG+TGG | 0.472239 | 4_1:+43933950 | None:intergenic |
| TGATAGTGTTGAATGTGTTG+TGG | 0.476411 | 4_1:-43930193 | Msa0549130:CDS |
| GCTGAGATTATTTGTGGAAG+TGG | 0.485912 | 4_1:+43933956 | None:intergenic |
| GATAGTGTTGAATGTGTTGT+GGG | 0.494386 | 4_1:-43930192 | Msa0549130:CDS |
| AAGAGCTGCAAGAGCAATGA+AGG | 0.494766 | 4_1:+43933599 | None:intergenic |
| AACTGAAAAGAGGAGTTAGA+TGG | 0.496291 | 4_1:+43933858 | None:intergenic |
| AATTTCCTTGATGCTGATGT+AGG | 0.503309 | 4_1:-43934050 | Msa0549130:CDS |
| GGTAACTACCTGAGCAATGA+TGG | 0.506977 | 4_1:+43929999 | None:intergenic |
| AGCAAAAGGCCTCGTGCTCA+TGG | 0.511731 | 4_1:-43933672 | Msa0549130:CDS |
| TTAATGGCAATTTAAAGGAT+GGG | 0.512013 | 4_1:+43929978 | None:intergenic |
| TTCCTTGATGCTGATGTAGG+AGG | 0.513457 | 4_1:-43934047 | Msa0549130:CDS |
| TGACATTACCATCATTGCTC+AGG | 0.520672 | 4_1:-43930007 | Msa0549130:CDS |
| TCCTTGATGCTGATGTAGGA+GGG | 0.555978 | 4_1:-43934046 | Msa0549130:CDS |
| AAGTATCATCAATCAGCAGC+TGG | 0.573007 | 4_1:-43934434 | Msa0549130:CDS |
| GTCAAGTGTAGAATCTCCAA+AGG | 0.576619 | 4_1:+43930026 | None:intergenic |
| TCTTCATCGCTGCATAGGCA+TGG | 0.581383 | 4_1:+43930231 | None:intergenic |
| AAGAATCTTCATCGCTGCAT+AGG | 0.581886 | 4_1:+43930226 | None:intergenic |
| ACCCTCCTACATCAGCATCA+AGG | 0.584158 | 4_1:+43934045 | None:intergenic |
| TGGTATTTGAAACTGAAAAG+AGG | 0.585974 | 4_1:+43933848 | None:intergenic |
| TACAATGTCAAGAGCACAAG+GGG | 0.594830 | 4_1:-43930116 | Msa0549130:CDS |
| GATACAATGTCAAGAGCACA+AGG | 0.611765 | 4_1:-43930118 | Msa0549130:CDS |
| TCAAGTGTAGAATCTCCAAA+GGG | 0.613125 | 4_1:+43930027 | None:intergenic |
| TGTGGGTTCACCATTTCAAG+TGG | 0.614039 | 4_1:-43930175 | Msa0549130:CDS |
| CGAATACAATATATTTGCTG+AGG | 0.615306 | 4_1:-43934084 | Msa0549130:CDS |
| AACAACAATGTTTAACTCTG+GGG | 0.649069 | 4_1:-43933980 | Msa0549130:CDS |
| TCATGGTAGAGATCACATCA+TGG | 0.685356 | 4_1:-43933655 | Msa0549130:CDS |
| TGATCTCTACCATGAGCACG+AGG | 0.691122 | 4_1:+43933663 | None:intergenic |
| ATACAATGTCAAGAGCACAA+GGG | 0.744485 | 4_1:-43930117 | Msa0549130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CGATTATTAATTAATTATTT+TGG | - | chr4_1:43930061-43930080 | Msa0549130:CDS | 10.0% |
| !!! | AACTTTTTTTTTTTTTTTTC+AGG | - | chr4_1:43930326-43930345 | Msa0549130:CDS | 10.0% |
| !! | ACAAATTAGTAATATTAATT+GGG | - | chr4_1:43932326-43932345 | Msa0549130:intron | 10.0% |
| !! | TATTTGTTTATAAATGTAAT+CGG | + | chr4_1:43932509-43932528 | None:intergenic | 10.0% |
| !! | AAAAATAATTAAGGAATTAA+TGG | - | chr4_1:43933202-43933221 | Msa0549130:intron | 10.0% |
| !! | AAAATAATTAAGGAATTAAT+GGG | - | chr4_1:43933203-43933222 | Msa0549130:intron | 10.0% |
| !! | AAAAATGATTGTTAATTTAT+TGG | - | chr4_1:43933243-43933262 | Msa0549130:intron | 10.0% |
| !! | AAAATTGATTGTTAATTTAT+TGG | - | chr4_1:43933279-43933298 | Msa0549130:intron | 10.0% |
| !!! | TTTTTTTAAAATTTCGTTTT+AGG | + | chr4_1:43933458-43933477 | None:intergenic | 10.0% |
| !!! | TCTATGTTTATTCTTATTTA+AGG | + | chr4_1:43930205-43930224 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTTTTGACAAG+AGG | + | chr4_1:43931109-43931128 | None:intergenic | 15.0% |
| !!! | TATTTTGACCAATATATAAA+GGG | + | chr4_1:43931141-43931160 | None:intergenic | 15.0% |
| !!! | AGTATTTTTATAATAATGAC+CGG | + | chr4_1:43931183-43931202 | None:intergenic | 15.0% |
| !! | TTCTCTTAAATAAAATCAAA+GGG | + | chr4_1:43931513-43931532 | None:intergenic | 15.0% |
| !! | TTTCTCTTAAATAAAATCAA+AGG | + | chr4_1:43931514-43931533 | None:intergenic | 15.0% |
| !! | TGTTGTTCTATAAAATAAAA+TGG | - | chr4_1:43931854-43931873 | Msa0549130:intron | 15.0% |
| !!! | AATTGTAGAGTATTTTATTT+GGG | + | chr4_1:43932052-43932071 | None:intergenic | 15.0% |
| !!! | AAATTGTAGAGTATTTTATT+TGG | + | chr4_1:43932053-43932072 | None:intergenic | 15.0% |
| !! | GACAAATTAGTAATATTAAT+TGG | - | chr4_1:43932325-43932344 | Msa0549130:intron | 15.0% |
| !! | CAAATTAGTAATATTAATTG+GGG | - | chr4_1:43932327-43932346 | Msa0549130:intron | 15.0% |
| !! | AAATTAGTAATATTAATTGG+GGG | - | chr4_1:43932328-43932347 | Msa0549130:intron | 15.0% |
| !! | ATTTGTTTATAAATGTAATC+GGG | + | chr4_1:43932508-43932527 | None:intergenic | 15.0% |
| !!! | TCAATAAAATCACATTTTTA+AGG | + | chr4_1:43932760-43932779 | None:intergenic | 15.0% |
| !!! | TTATTTTGACCATATATTAA+CGG | + | chr4_1:43932819-43932838 | None:intergenic | 15.0% |
| !! | TGAAAAAGGTAAAAAAAAAT+AGG | - | chr4_1:43933172-43933191 | Msa0549130:intron | 15.0% |
| !!! | ATTTTATGATCTCTAATAAT+TGG | + | chr4_1:43933673-43933692 | None:intergenic | 15.0% |
| !!! | GTTTATTCTTATTTAAGGTT+AGG | + | chr4_1:43930200-43930219 | None:intergenic | 20.0% |
| !! | GTCTACAAATATATTTGAAA+AGG | + | chr4_1:43930245-43930264 | None:intergenic | 20.0% |
| !!! | TAATTGATGATTTTAAGAGT+TGG | + | chr4_1:43930916-43930935 | None:intergenic | 20.0% |
| !! | TAACATTTCCCTTTATATAT+TGG | - | chr4_1:43931130-43931149 | Msa0549130:intron | 20.0% |
| !!! | CTATTTTGACCAATATATAA+AGG | + | chr4_1:43931142-43931161 | None:intergenic | 20.0% |
| !! | ACATTCTTATCTTTCTATAA+AGG | - | chr4_1:43931423-43931442 | Msa0549130:intron | 20.0% |
| !! | AAATTCTTGATAAAAAGCTT+CGG | - | chr4_1:43931819-43931838 | Msa0549130:intron | 20.0% |
| !! | AAATGGAAAATGTTATCTTA+AGG | - | chr4_1:43931871-43931890 | Msa0549130:intron | 20.0% |
| !! | AATGGAAAATGTTATCTTAA+GGG | - | chr4_1:43931872-43931891 | Msa0549130:intron | 20.0% |
| !!! | AAAGTATACTACTACTTTTA+AGG | + | chr4_1:43932098-43932117 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | + | chr4_1:43932285-43932304 | None:intergenic | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | - | chr4_1:43932410-43932429 | Msa0549130:intron | 20.0% |
| !! | TTTGTTTATAAATGTAATCG+GGG | + | chr4_1:43932507-43932526 | None:intergenic | 20.0% |
| !!! | TAAACAAATACCAACTTTTT+AGG | - | chr4_1:43932519-43932538 | Msa0549130:intron | 20.0% |
| !! | ATTCAATTAACCTAAAAAGT+TGG | + | chr4_1:43932532-43932551 | None:intergenic | 20.0% |
| !! | AACAATTAGAATTATCATGA+GGG | - | chr4_1:43932690-43932709 | Msa0549130:intron | 20.0% |
| !!! | CACTTTAGTTCAAAATAAAT+AGG | - | chr4_1:43932722-43932741 | Msa0549130:intron | 20.0% |
| !!! | TTGATTTTGTTTATTTGCAA+CGG | - | chr4_1:43932776-43932795 | Msa0549130:intron | 20.0% |
| !!! | TTAACTTTTCCGTTAATATA+TGG | - | chr4_1:43932807-43932826 | Msa0549130:intron | 20.0% |
| !! | AAAGGTAAAAAAAAATAGGA+AGG | - | chr4_1:43933176-43933195 | Msa0549130:intron | 20.0% |
| !! | ACATATTAATTCTCTTACTT+GGG | + | chr4_1:43933370-43933389 | None:intergenic | 20.0% |
| !! | AACATATTAATTCTCTTACT+TGG | + | chr4_1:43933371-43933390 | None:intergenic | 20.0% |
| !! | AGTAAGAGAATTAATATGTT+TGG | - | chr4_1:43933371-43933390 | Msa0549130:intron | 20.0% |
| !! | TACTCATATTTAATTAGTGT+CGG | + | chr4_1:43933526-43933545 | None:intergenic | 20.0% |
| !! | TTAGAGATAAAGATAAATCT+TGG | - | chr4_1:43934018-43934037 | Msa0549130:CDS | 20.0% |
| ! | TTTGGTAAGAAAATCACATA+TGG | - | chr4_1:43930037-43930056 | Msa0549130:CDS | 25.0% |
| ! | AAACAACAATGTTTAACTCT+GGG | - | chr4_1:43930459-43930478 | Msa0549130:intron | 25.0% |
| !! | GTGATTCATATTTTCCAATT+CGG | + | chr4_1:43930688-43930707 | None:intergenic | 25.0% |
| !!! | TAAAGTATCGTACCTTTTTA+AGG | + | chr4_1:43930875-43930894 | None:intergenic | 25.0% |
| !! | TTTTTATAATAATGACCGGA+AGG | + | chr4_1:43931179-43931198 | None:intergenic | 25.0% |
| !!! | TAAGCAAAAGACTACTTTTT+AGG | + | chr4_1:43931302-43931321 | None:intergenic | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | + | chr4_1:43931631-43931650 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | + | chr4_1:43931644-43931663 | None:intergenic | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | - | chr4_1:43931643-43931662 | Msa0549130:intron | 25.0% |
| !! | ACTGCTACTTCAAAAAAATA+TGG | - | chr4_1:43931732-43931751 | Msa0549130:intron | 25.0% |
| !! | CTGCTACTTCAAAAAAATAT+GGG | - | chr4_1:43931733-43931752 | Msa0549130:intron | 25.0% |
| ! | AATTCTTGATAAAAAGCTTC+GGG | - | chr4_1:43931820-43931839 | Msa0549130:intron | 25.0% |
| ! | ACAAGTTAAGGATCTATAAA+AGG | + | chr4_1:43932004-43932023 | None:intergenic | 25.0% |
| ! | AGAAATGTGAAAAATGCAAA+GGG | + | chr4_1:43932202-43932221 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAATGCAA+AGG | + | chr4_1:43932203-43932222 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr4_1:43932374-43932393 | Msa0549130:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr4_1:43932375-43932394 | Msa0549130:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | - | chr4_1:43932409-43932428 | Msa0549130:intron | 25.0% |
| ! | CAAAAATAAAATCAAATGGG+TGG | - | chr4_1:43932413-43932432 | Msa0549130:intron | 25.0% |
| !!! | GTTTTAATGAATACTTACTC+TGG | + | chr4_1:43932620-43932639 | None:intergenic | 25.0% |
| ! | TTAATACAGCAACAAATTGT+AGG | - | chr4_1:43932659-43932678 | Msa0549130:intron | 25.0% |
| ! | CTCATGATAATTCTAATTGT+TGG | + | chr4_1:43932691-43932710 | None:intergenic | 25.0% |
| ! | CAACAATTAGAATTATCATG+AGG | - | chr4_1:43932689-43932708 | Msa0549130:intron | 25.0% |
| !!! | AATCACATTTTTAAGGAATG+TGG | + | chr4_1:43932753-43932772 | None:intergenic | 25.0% |
| ! | AGTTATATAAATAGTGCACA+TGG | - | chr4_1:43932838-43932857 | Msa0549130:intron | 25.0% |
| ! | AGTTATATAAATAGTGCACA+TGG | - | chr4_1:43932838-43932857 | Msa0549130:intron | 25.0% |
| ! | GGAAGGAGAAAAAATAATTA+AGG | - | chr4_1:43933193-43933212 | Msa0549130:intron | 25.0% |
| !! | TAATTAAGGAATTAATGGGT+TGG | - | chr4_1:43933207-43933226 | Msa0549130:intron | 25.0% |
| ! | TGATTCAATCACAAATGTAA+GGG | + | chr4_1:43933340-43933359 | None:intergenic | 25.0% |
| ! | ATGATTCAATCACAAATGTA+AGG | + | chr4_1:43933341-43933360 | None:intergenic | 25.0% |
| ! | TTTAGGCCTAAAAATACATT+GGG | + | chr4_1:43933441-43933460 | None:intergenic | 25.0% |
| !! | TTTTAGGCCTAAAAATACAT+TGG | + | chr4_1:43933442-43933461 | None:intergenic | 25.0% |
| ! | CAAAAAAATGAAGCCTAATA+CGG | - | chr4_1:43933865-43933884 | Msa0549130:CDS | 25.0% |
| ! | TAAAACAATGCTACATAGTA+GGG | + | chr4_1:43933948-43933967 | None:intergenic | 25.0% |
| !! | TAGGAAAACAAATGTTGATT+CGG | - | chr4_1:43934300-43934319 | Msa0549130:intron | 25.0% |
| ! | TTAATGGCAATTTAAAGGAT+GGG | + | chr4_1:43934465-43934484 | None:intergenic | 25.0% |
| ! | TTGATGATACTTTCATTGCT+GGG | + | chr4_1:43929998-43930017 | None:intergenic | 30.0% |
| ! | ATTGATGATACTTTCATTGC+TGG | + | chr4_1:43929999-43930018 | None:intergenic | 30.0% |
| ! | CGAATACAATATATTTGCTG+AGG | - | chr4_1:43930356-43930375 | Msa0549130:intron | 30.0% |
| CAAACAACAATGTTTAACTC+TGG | - | chr4_1:43930458-43930477 | Msa0549130:intron | 30.0% | |
| AACAACAATGTTTAACTCTG+GGG | - | chr4_1:43930460-43930479 | Msa0549130:intron | 30.0% | |
| ! | TGGTATTTGAAACTGAAAAG+AGG | + | chr4_1:43930595-43930614 | None:intergenic | 30.0% |
| !!! | ATTCTCTTTTGAGTTACTAG+GGG | + | chr4_1:43930643-43930662 | None:intergenic | 30.0% |
| !!! | CATTCTCTTTTGAGTTACTA+GGG | + | chr4_1:43930644-43930663 | None:intergenic | 30.0% |
| !!! | TCATTCTCTTTTGAGTTACT+AGG | + | chr4_1:43930645-43930664 | None:intergenic | 30.0% |
| ! | TTCATATTTTCCAATTCGGT+TGG | + | chr4_1:43930684-43930703 | None:intergenic | 30.0% |
| ACTCAACAAAAACCTCAAAA+GGG | - | chr4_1:43930706-43930725 | Msa0549130:intron | 30.0% | |
| CAAAAACCTCAAAAAGCAAA+AGG | - | chr4_1:43930754-43930773 | Msa0549130:intron | 30.0% | |
| TCTTGTTCCTAACCTTAAAA+AGG | - | chr4_1:43930860-43930879 | Msa0549130:intron | 30.0% | |
| !!! | TATCGTACCTTTTTAAGGTT+AGG | + | chr4_1:43930870-43930889 | None:intergenic | 30.0% |
| !! | GATTTTAAGAGTTGGCTAAT+AGG | + | chr4_1:43930908-43930927 | None:intergenic | 30.0% |
| TATGAAATGAGTGATGTATG+TGG | + | chr4_1:43931277-43931296 | None:intergenic | 30.0% | |
| CTTTCTATAAAGGAAAATGC+TGG | - | chr4_1:43931433-43931452 | Msa0549130:intron | 30.0% | |
| ATGAAATTTCCAGAATGTGT+TGG | - | chr4_1:43931476-43931495 | Msa0549130:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | - | chr4_1:43931546-43931565 | Msa0549130:intron | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr4_1:43931618-43931637 | None:intergenic | 30.0% | |
| TCAACAAAGTTGTCATCAAA+TGG | - | chr4_1:43931669-43931688 | Msa0549130:intron | 30.0% | |
| !! | ATCCTTAACTTGTATCCTTA+AGG | - | chr4_1:43932011-43932030 | Msa0549130:intron | 30.0% |
| TACCTTAAGGATACAAGTTA+AGG | + | chr4_1:43932016-43932035 | None:intergenic | 30.0% | |
| ! | TAATGCTAACTTGTACCTTA+AGG | + | chr4_1:43932029-43932048 | None:intergenic | 30.0% |
| ! | AGTATTTAGTTCCAGTTGAT+AGG | + | chr4_1:43932156-43932175 | None:intergenic | 30.0% |
| AAATGTGAAAAATGCAAAGG+GGG | + | chr4_1:43932200-43932219 | None:intergenic | 30.0% | |
| GAAATGTGAAAAATGCAAAG+GGG | + | chr4_1:43932201-43932220 | None:intergenic | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | + | chr4_1:43932276-43932295 | None:intergenic | 30.0% | |
| ! | TATTAATTGGGGGTATGTTT+AGG | - | chr4_1:43932338-43932357 | Msa0549130:intron | 30.0% |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr4_1:43932376-43932395 | Msa0549130:intron | 30.0% | |
| CATCTAGTAATTTGAAAAGG+GGG | - | chr4_1:43932377-43932396 | Msa0549130:intron | 30.0% | |
| GCTGTATTAATTACTACAAG+TGG | + | chr4_1:43932649-43932668 | None:intergenic | 30.0% | |
| !! | ATTTTGTTTATTTGCAACGG+AGG | - | chr4_1:43932779-43932798 | Msa0549130:intron | 30.0% |
| !! | TTTTGTTTATTTGCAACGGA+GGG | - | chr4_1:43932780-43932799 | Msa0549130:intron | 30.0% |
| !! | CTTTGACTTGTATTTATGAG+CGG | - | chr4_1:43932896-43932915 | Msa0549130:intron | 30.0% |
| !! | CTTCTTTTAAAGATGAGTAG+TGG | - | chr4_1:43933127-43933146 | Msa0549130:intron | 30.0% |
| GGTTTAGAAAACAAATACTC+CGG | - | chr4_1:43933300-43933319 | Msa0549130:intron | 30.0% | |
| !! | AAGGGTTTTGATATATACTC+CGG | + | chr4_1:43933322-43933341 | None:intergenic | 30.0% |
| TATAGAATCACTTTCGATTG+AGG | + | chr4_1:43933493-43933512 | None:intergenic | 30.0% | |
| AGTGGTATGTAATTCAATGT+CGG | + | chr4_1:43933790-43933809 | None:intergenic | 30.0% | |
| !!! | AATTTTTTAGGCTCCGTATT+AGG | + | chr4_1:43933881-43933900 | None:intergenic | 30.0% |
| GTAAAACAATGCTACATAGT+AGG | + | chr4_1:43933949-43933968 | None:intergenic | 30.0% | |
| ATCTGTAAAAATCTGCTAGA+TGG | - | chr4_1:43934076-43934095 | Msa0549130:CDS | 30.0% | |
| GAAAGAGCTTAAAAATCGTT+TGG | - | chr4_1:43934136-43934155 | Msa0549130:intron | 30.0% | |
| TGAGACAAATCTTGGAGATT+TGG | + | chr4_1:43930267-43930286 | None:intergenic | 35.0% | |
| AATTTCCTTGATGCTGATGT+AGG | - | chr4_1:43930390-43930409 | Msa0549130:intron | 35.0% | |
| !! | TGACTTGCTGAGATTATTTG+TGG | + | chr4_1:43930493-43930512 | None:intergenic | 35.0% |
| !! | GATGGTGATGGAGAAATATT+TGG | + | chr4_1:43930567-43930586 | None:intergenic | 35.0% |
| AACTGAAAAGAGGAGTTAGA+TGG | + | chr4_1:43930585-43930604 | None:intergenic | 35.0% | |
| !!! | TTCTCTTTTGAGTTACTAGG+GGG | + | chr4_1:43930642-43930661 | None:intergenic | 35.0% |
| CACTCAACAAAAACCTCAAA+AGG | - | chr4_1:43930705-43930724 | Msa0549130:intron | 35.0% | |
| GTCGTTGGAAAAAGAAAACA+TGG | - | chr4_1:43930728-43930747 | Msa0549130:intron | 35.0% | |
| GATTACATAGATACTCCTTC+CGG | - | chr4_1:43931161-43931180 | Msa0549130:intron | 35.0% | |
| CATCGAAGAAATGATGTATG+TGG | - | chr4_1:43931212-43931231 | Msa0549130:intron | 35.0% | |
| GATGTATGTGGTCTATTATG+TGG | - | chr4_1:43931224-43931243 | Msa0549130:intron | 35.0% | |
| ATGTACACTACTACTTTCTC+TGG | + | chr4_1:43931334-43931353 | None:intergenic | 35.0% | |
| AGAGAAAGTAGTAGTGTACA+TGG | - | chr4_1:43931333-43931352 | Msa0549130:intron | 35.0% | |
| GACATGTATTTATGAGTGCA+AGG | - | chr4_1:43931365-43931384 | Msa0549130:intron | 35.0% | |
| AGTGCAAGGAGTCATAATAT+AGG | - | chr4_1:43931379-43931398 | Msa0549130:intron | 35.0% | |
| ! | CACATTCTGGAAATTTCATG+AGG | + | chr4_1:43931475-43931494 | None:intergenic | 35.0% |
| GTCCAAAAGTTGTCAAAAAG+TGG | + | chr4_1:43931551-43931570 | None:intergenic | 35.0% | |
| TTTATCAAGAATTTGTCCCG+AGG | + | chr4_1:43931813-43931832 | None:intergenic | 35.0% | |
| TTGAAAAGGGGGTTACATTT+AGG | - | chr4_1:43932388-43932407 | Msa0549130:intron | 35.0% | |
| TGAAAAGGGGGTTACATTTA+GGG | - | chr4_1:43932389-43932408 | Msa0549130:intron | 35.0% | |
| TCAAATGGGTGGTTACATTA+AGG | - | chr4_1:43932424-43932443 | Msa0549130:intron | 35.0% | |
| CAAATGGGTGGTTACATTAA+GGG | - | chr4_1:43932425-43932444 | Msa0549130:intron | 35.0% | |
| ! | AGCGGATGAAGTACTAATAT+AGG | - | chr4_1:43932914-43932933 | Msa0549130:intron | 35.0% |
| TTGACAATTACTCTGTAGCA+GGG | - | chr4_1:43933411-43933430 | Msa0549130:intron | 35.0% | |
| CTTTCGATTGAGGAAACTTA+TGG | + | chr4_1:43933483-43933502 | None:intergenic | 35.0% | |
| !!! | TTTAGGCCCTCGAATTTTTT+AGG | + | chr4_1:43933893-43933912 | None:intergenic | 35.0% |
| ! | TGATAGTGTTGAATGTGTTG+TGG | - | chr4_1:43934247-43934266 | Msa0549130:intron | 35.0% |
| ! | GATAGTGTTGAATGTGTTGT+GGG | - | chr4_1:43934248-43934267 | Msa0549130:intron | 35.0% |
| ! | ATACAATGTCAAGAGCACAA+GGG | - | chr4_1:43934323-43934342 | Msa0549130:intron | 35.0% |
| !! | GGGGCTTTTGGTTAAAATAA+TGG | - | chr4_1:43934343-43934362 | Msa0549130:intron | 35.0% |
| TCAAGTGTAGAATCTCCAAA+GGG | + | chr4_1:43934416-43934435 | None:intergenic | 35.0% | |
| AAGTATCATCAATCAGCAGC+TGG | - | chr4_1:43930006-43930025 | Msa0549130:CDS | 40.0% | |
| !! | TTGTGACGGATATTCTGAAG+TGG | + | chr4_1:43930167-43930186 | None:intergenic | 40.0% |
| ACTTCAGAATATCCGTCACA+AGG | - | chr4_1:43930166-43930185 | Msa0549130:CDS | 40.0% | |
| CTTCAGAATATCCGTCACAA+GGG | - | chr4_1:43930167-43930186 | Msa0549130:CDS | 40.0% | |
| CCAAACGTTGAGACAAATCT+TGG | + | chr4_1:43930275-43930294 | None:intergenic | 40.0% | |
| CCAAGATTTGTCTCAACGTT+TGG | - | chr4_1:43930272-43930291 | Msa0549130:CDS | 40.0% | |
| CATCAGCATCAAGGAAATTC+AGG | + | chr4_1:43930389-43930408 | None:intergenic | 40.0% | |
| GCTGAGATTATTTGTGGAAG+TGG | + | chr4_1:43930487-43930506 | None:intergenic | 40.0% | |
| AAAGAGGAGTTAGATGGTGA+TGG | + | chr4_1:43930579-43930598 | None:intergenic | 40.0% | |
| AGTTACTAGGGGGTGAATTT+GGG | + | chr4_1:43930632-43930651 | None:intergenic | 40.0% | |
| AAAAACCTCAAAAGGGTCGT+TGG | - | chr4_1:43930713-43930732 | Msa0549130:intron | 40.0% | |
| ! | TTTTTCCAACGACCCTTTTG+AGG | + | chr4_1:43930721-43930740 | None:intergenic | 40.0% |
| TCATGGTAGAGATCACATCA+TGG | - | chr4_1:43930785-43930804 | Msa0549130:intron | 40.0% | |
| TGCAAGAGCAATGAAGGTTT+GGG | + | chr4_1:43930838-43930857 | None:intergenic | 40.0% | |
| AGAATGTTGCCAACACATTC+TGG | + | chr4_1:43931488-43931507 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | + | chr4_1:43931608-43931627 | None:intergenic | 40.0% | |
| GAGTTTATGAACCCGAAACA+CGG | - | chr4_1:43932127-43932146 | Msa0549130:intron | 40.0% | |
| GCAAAGGGGGATTACATTAA+GGG | + | chr4_1:43932187-43932206 | None:intergenic | 40.0% | |
| TGCAAAGGGGGATTACATTA+AGG | + | chr4_1:43932188-43932207 | None:intergenic | 40.0% | |
| GTTGACAATTACTCTGTAGC+AGG | - | chr4_1:43933410-43933429 | Msa0549130:intron | 40.0% | |
| GGCCTAAAAATACATTGGGA+CGG | + | chr4_1:43933437-43933456 | None:intergenic | 40.0% | |
| TACGGAGCCTAAAAAATTCG+AGG | - | chr4_1:43933883-43933902 | Msa0549130:CDS | 40.0% | |
| ACGGAGCCTAAAAAATTCGA+GGG | - | chr4_1:43933884-43933903 | Msa0549130:CDS | 40.0% | |
| AAGAATCTTCATCGCTGCAT+AGG | + | chr4_1:43934217-43934236 | None:intergenic | 40.0% | |
| ACTCTTGCTTCCACTTGAAA+TGG | + | chr4_1:43934278-43934297 | None:intergenic | 40.0% | |
| !! | CAAGTGGAAGCAAGAGTATT+AGG | - | chr4_1:43934281-43934300 | Msa0549130:intron | 40.0% |
| ! | GATACAATGTCAAGAGCACA+AGG | - | chr4_1:43934322-43934341 | Msa0549130:intron | 40.0% |
| ! | TACAATGTCAAGAGCACAAG+GGG | - | chr4_1:43934324-43934343 | Msa0549130:intron | 40.0% |
| AATAGCAGTGTCTTACCCTT+TGG | - | chr4_1:43934398-43934417 | Msa0549130:intron | 40.0% | |
| GTCAAGTGTAGAATCTCCAA+AGG | + | chr4_1:43934417-43934436 | None:intergenic | 40.0% | |
| TGACATTACCATCATTGCTC+AGG | - | chr4_1:43934433-43934452 | Msa0549130:CDS | 40.0% | |
| CAGCAGCTGGTTAACTGATT+TGG | - | chr4_1:43930019-43930038 | Msa0549130:CDS | 45.0% | |
| TAGGCTTATGTCCCTTGTGA+CGG | + | chr4_1:43930181-43930200 | None:intergenic | 45.0% | |
| TTCCTTGATGCTGATGTAGG+AGG | - | chr4_1:43930393-43930412 | Msa0549130:intron | 45.0% | |
| TCCTTGATGCTGATGTAGGA+GGG | - | chr4_1:43930394-43930413 | Msa0549130:intron | 45.0% | |
| TTTGGGGGGTTGTCAAAAGA+TGG | + | chr4_1:43930615-43930634 | None:intergenic | 45.0% | |
| TTACTAGGGGGTGAATTTGG+GGG | + | chr4_1:43930630-43930649 | None:intergenic | 45.0% | |
| GTTACTAGGGGGTGAATTTG+GGG | + | chr4_1:43930631-43930650 | None:intergenic | 45.0% | |
| GAGTTACTAGGGGGTGAATT+TGG | + | chr4_1:43930633-43930652 | None:intergenic | 45.0% | |
| ATCAGTGTCTCCAACCGAAT+TGG | - | chr4_1:43930671-43930690 | Msa0549130:intron | 45.0% | |
| !!! | ACGAGGCCTTTTGCTTTTTG+AGG | + | chr4_1:43930763-43930782 | None:intergenic | 45.0% |
| CTGCAAGAGCAATGAAGGTT+TGG | + | chr4_1:43930839-43930858 | None:intergenic | 45.0% | |
| AAGAGCTGCAAGAGCAATGA+AGG | + | chr4_1:43930844-43930863 | None:intergenic | 45.0% | |
| !!! | AACCACGATGCCGTTTTTTC+CGG | - | chr4_1:43931756-43931775 | Msa0549130:intron | 45.0% |
| AATCACAATTCATGCTGGCC+CGG | + | chr4_1:43931778-43931797 | None:intergenic | 45.0% | |
| GGACCAATCACAATTCATGC+TGG | + | chr4_1:43931783-43931802 | None:intergenic | 45.0% | |
| ! | TGATTGGTCCAACAAAGCCT+CGG | - | chr4_1:43931793-43931812 | Msa0549130:intron | 45.0% |
| ! | AATTTGTCCCGAGGCTTTGT+TGG | + | chr4_1:43931804-43931823 | None:intergenic | 45.0% |
| TTTATGAACCCGAAACACGG+TGG | - | chr4_1:43932130-43932149 | Msa0549130:intron | 45.0% | |
| GGATTACATTAAGGGACGGA+GGG | + | chr4_1:43932179-43932198 | None:intergenic | 45.0% | |
| AGGGGGATTACATTAAGGGA+CGG | + | chr4_1:43932183-43932202 | None:intergenic | 45.0% | |
| TGGGTGGTTACATTAAGGGA+CGG | - | chr4_1:43932429-43932448 | Msa0549130:intron | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | - | chr4_1:43932433-43932452 | Msa0549130:intron | 45.0% | |
| ! | GGCCGTCCCAATGTATTTTT+AGG | - | chr4_1:43933432-43933451 | Msa0549130:intron | 45.0% |
| ATGTTCACTCGAAGCTCAAG+TGG | + | chr4_1:43933808-43933827 | None:intergenic | 45.0% | |
| !! | ACATAGTAGGGCTGGTCTAA+GGG | + | chr4_1:43933936-43933955 | None:intergenic | 45.0% |
| !! | TACATAGTAGGGCTGGTCTA+AGG | + | chr4_1:43933937-43933956 | None:intergenic | 45.0% |
| ACAATGCTACATAGTAGGGC+TGG | + | chr4_1:43933944-43933963 | None:intergenic | 45.0% | |
| TGTGGGTTCACCATTTCAAG+TGG | - | chr4_1:43934265-43934284 | Msa0549130:intron | 45.0% | |
| GGTAACTACCTGAGCAATGA+TGG | + | chr4_1:43934444-43934463 | None:intergenic | 45.0% | |
| !!! | TTATATTTTAAAAATATTGA+AGG | - | chr4_1:43931051-43931070 | Msa0549130:intron | 5.0% |
| !!! | TAAAAGTAAAATTATTTTTT+TGG | - | chr4_1:43931910-43931929 | Msa0549130:intron | 5.0% |
| !! | ATATAATAAAAAAATGAAAA+AGG | - | chr4_1:43933158-43933177 | Msa0549130:intron | 5.0% |
| ACCCTCCTACATCAGCATCA+AGG | + | chr4_1:43930398-43930417 | None:intergenic | 50.0% | |
| TACTAGGGGGTGAATTTGGG+GGG | + | chr4_1:43930629-43930648 | None:intergenic | 50.0% | |
| TGATCTCTACCATGAGCACG+AGG | + | chr4_1:43930780-43930799 | None:intergenic | 50.0% | |
| GGAAAATGCTGGATAACGCG+AGG | - | chr4_1:43931444-43931463 | Msa0549130:intron | 50.0% | |
| AAATGCTGGATAACGCGAGG+TGG | - | chr4_1:43931447-43931466 | Msa0549130:intron | 50.0% | |
| !!! | ACCACGATGCCGTTTTTTCC+GGG | - | chr4_1:43931757-43931776 | Msa0549130:intron | 50.0% |
| TCATGCTGGCCCGGAAAAAA+CGG | + | chr4_1:43931769-43931788 | None:intergenic | 50.0% | |
| GGGCCAGCATGAATTGTGAT+TGG | - | chr4_1:43931777-43931796 | Msa0549130:intron | 50.0% | |
| ! | GATTGGTCCAACAAAGCCTC+GGG | - | chr4_1:43931794-43931813 | Msa0549130:intron | 50.0% |
| TTGATAGGCCACCGTGTTTC+GGG | + | chr4_1:43932141-43932160 | None:intergenic | 50.0% | |
| ! | GTTGATAGGCCACCGTGTTT+CGG | + | chr4_1:43932142-43932161 | None:intergenic | 50.0% |
| AAACACGGTGGCCTATCAAC+TGG | - | chr4_1:43932142-43932161 | Msa0549130:intron | 50.0% | |
| GGGATTACATTAAGGGACGG+AGG | + | chr4_1:43932180-43932199 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | - | chr4_1:43932432-43932451 | Msa0549130:intron | 50.0% | |
| !! | CATAGTAGGGCTGGTCTAAG+GGG | + | chr4_1:43933935-43933954 | None:intergenic | 50.0% |
| ATCGCTGCATAGGCATGGTT+TGG | + | chr4_1:43934207-43934226 | None:intergenic | 50.0% | |
| TCTTCATCGCTGCATAGGCA+TGG | + | chr4_1:43934212-43934231 | None:intergenic | 50.0% | |
| !! | TCAAGAGCACAAGGGGCTTT+TGG | - | chr4_1:43934331-43934350 | Msa0549130:intron | 50.0% |
| AGCAAAAGGCCTCGTGCTCA+TGG | - | chr4_1:43930768-43930787 | Msa0549130:intron | 55.0% | |
| GCCTAAAGCCCCTGCTTTAG+TGG | - | chr4_1:43933906-43933925 | Msa0549130:CDS | 55.0% | |
| GCCACTAAAGCAGGGGCTTT+AGG | + | chr4_1:43933910-43933929 | None:intergenic | 55.0% | |
| AAGGGGCTGCCACTAAAGCA+GGG | + | chr4_1:43933918-43933937 | None:intergenic | 55.0% | |
| TAAGGGGCTGCCACTAAAGC+AGG | + | chr4_1:43933919-43933938 | None:intergenic | 55.0% | |
| GCCCGGAAAAAACGGCATCG+TGG | + | chr4_1:43931761-43931780 | None:intergenic | 60.0% | |
| AGGGGCTGCCACTAAAGCAG+GGG | + | chr4_1:43933917-43933936 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 43929978 | 43934484 | 43929978 | ID=Msa0549130;Name=Msa0549130 |
| chr4_1 | mRNA | 43929978 | 43934484 | 43929978 | ID=Msa0549130-mRNA-1;Parent=Msa0549130;Name=Msa0549130-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0|0|1|1|1|3|0|328 |
| chr4_1 | exon | 43934422 | 43934484 | 43934422 | ID=Msa0549130-mRNA-1:exon:11343;Parent=Msa0549130-mRNA-1 |
| chr4_1 | exon | 43933581 | 43934114 | 43933581 | ID=Msa0549130-mRNA-1:exon:11342;Parent=Msa0549130-mRNA-1 |
| chr4_1 | exon | 43929978 | 43930367 | 43929978 | ID=Msa0549130-mRNA-1:exon:11341;Parent=Msa0549130-mRNA-1 |
| chr4_1 | CDS | 43934422 | 43934484 | 43934422 | ID=Msa0549130-mRNA-1:cds;Parent=Msa0549130-mRNA-1 |
| chr4_1 | CDS | 43933581 | 43934114 | 43933581 | ID=Msa0549130-mRNA-1:cds;Parent=Msa0549130-mRNA-1 |
| chr4_1 | CDS | 43929978 | 43930367 | 43929978 | ID=Msa0549130-mRNA-1:cds;Parent=Msa0549130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
