Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839040 | AES95304.2 | 92.686 | 752 | 8 | 2 | 2 | 706 | 80 | 831 | 0.0 | 1417 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839040 | sp|P24095|LOXX_SOYBN | 68.861 | 790 | 158 | 6 | 2 | 706 | 78 | 864 | 0.0 | 1101 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839040 | G7K037 | 92.686 | 752 | 8 | 2 | 2 | 706 | 80 | 831 | 0.0 | 1417 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004990 | Msa0839040 | 0.800062 | 1.718556e-48 | -8.615850e-47 |
| Msa0011010 | Msa0839040 | 0.801701 | 7.952961e-49 | -8.615850e-47 |
| Msa0011040 | Msa0839040 | 0.811892 | 5.576294e-51 | -8.615850e-47 |
| Msa0013270 | Msa0839040 | 0.804217 | 2.402151e-49 | -8.615850e-47 |
| Msa0014590 | Msa0839040 | 0.836525 | 8.892823e-57 | -8.615850e-47 |
| Msa0024650 | Msa0839040 | 0.838363 | 3.007214e-57 | -8.615850e-47 |
| Msa0030090 | Msa0839040 | 0.808669 | 2.764250e-50 | -8.615850e-47 |
| Msa0034100 | Msa0839040 | -0.802347 | 5.857531e-49 | -8.615850e-47 |
| Msa0037270 | Msa0839040 | -0.817598 | 3.035128e-52 | -8.615850e-47 |
| Msa0038010 | Msa0839040 | 0.820328 | 7.267752e-53 | -8.615850e-47 |
| Msa0038750 | Msa0839040 | -0.803366 | 3.608644e-49 | -8.615850e-47 |
| Msa0042210 | Msa0839040 | -0.805836 | 1.101331e-49 | -8.615850e-47 |
| Msa0048380 | Msa0839040 | 0.802989 | 4.318730e-49 | -8.615850e-47 |
| Msa0063540 | Msa0839040 | 0.832455 | 9.359584e-56 | -8.615850e-47 |
| Msa0065520 | Msa0839040 | -0.811563 | 6.575568e-51 | -8.615850e-47 |
| Msa0073110 | Msa0839040 | 0.813014 | 3.171125e-51 | -8.615850e-47 |
| Msa0081120 | Msa0839040 | -0.813008 | 3.181704e-51 | -8.615850e-47 |
| Msa0081790 | Msa0839040 | -0.822746 | 2.008143e-53 | -8.615850e-47 |
| Msa0085710 | Msa0839040 | 0.802115 | 6.539476e-49 | -8.615850e-47 |
| Msa0087900 | Msa0839040 | 0.814701 | 1.347056e-51 | -8.615850e-47 |
| Msa0095910 | Msa0839040 | 0.817078 | 3.974434e-52 | -8.615850e-47 |
| Msa0106540 | Msa0839040 | 0.812269 | 4.615575e-51 | -8.615850e-47 |
| Msa0111780 | Msa0839040 | 0.818806 | 1.617614e-52 | -8.615850e-47 |
| Msa0120450 | Msa0839040 | 0.837834 | 4.113922e-57 | -8.615850e-47 |
| Msa0603180 | Msa0839040 | -0.813777 | 2.155102e-51 | -8.615850e-47 |
| Msa0604200 | Msa0839040 | 0.811458 | 6.929657e-51 | -8.615850e-47 |
| Msa0604280 | Msa0839040 | 0.839119 | 1.916635e-57 | -8.615850e-47 |
| Msa0606600 | Msa0839040 | 0.808799 | 2.592925e-50 | -8.615850e-47 |
| Msa0614960 | Msa0839040 | 0.804200 | 2.420875e-49 | -8.615850e-47 |
| Msa0629160 | Msa0839040 | 0.806632 | 7.486692e-50 | -8.615850e-47 |
| Msa0629720 | Msa0839040 | 0.808418 | 3.127538e-50 | -8.615850e-47 |
| Msa0634290 | Msa0839040 | 0.822067 | 2.888706e-53 | -8.615850e-47 |
| Msa0645370 | Msa0839040 | 0.828229 | 1.009626e-54 | -8.615850e-47 |
| Msa0655370 | Msa0839040 | 0.813699 | 2.242980e-51 | -8.615850e-47 |
| Msa0680460 | Msa0839040 | 0.812550 | 4.007684e-51 | -8.615850e-47 |
| Msa0684030 | Msa0839040 | -0.806062 | 9.873566e-50 | -8.615850e-47 |
| Msa0685080 | Msa0839040 | 0.809372 | 1.954928e-50 | -8.615850e-47 |
| Msa0692480 | Msa0839040 | -0.801117 | 1.047515e-48 | -8.615850e-47 |
| Msa0699170 | Msa0839040 | 0.815130 | 1.082290e-51 | -8.615850e-47 |
| Msa0715250 | Msa0839040 | 0.814192 | 1.745923e-51 | -8.615850e-47 |
| Msa0718770 | Msa0839040 | 0.902468 | 9.402012e-79 | -8.615850e-47 |
| Msa0720810 | Msa0839040 | 0.804710 | 1.895936e-49 | -8.615850e-47 |
| Msa0751960 | Msa0839040 | 0.819919 | 9.016446e-53 | -8.615850e-47 |
| Msa0757120 | Msa0839040 | 0.814070 | 1.858040e-51 | -8.615850e-47 |
| Msa0758150 | Msa0839040 | 0.827527 | 1.489207e-54 | -8.615850e-47 |
| Msa0761950 | Msa0839040 | 0.807969 | 3.898744e-50 | -8.615850e-47 |
| Msa0787860 | Msa0839040 | 0.818535 | 1.863200e-52 | -8.615850e-47 |
| Msa0792330 | Msa0839040 | 0.816400 | 5.638365e-52 | -8.615850e-47 |
| Msa0792410 | Msa0839040 | 0.812174 | 4.840159e-51 | -8.615850e-47 |
| Msa0798150 | Msa0839040 | 0.801655 | 8.126480e-49 | -8.615850e-47 |
| Msa0801920 | Msa0839040 | -0.800876 | 1.173263e-48 | -8.615850e-47 |
| Msa0802600 | Msa0839040 | 0.826041 | 3.371605e-54 | -8.615850e-47 |
| Msa0803880 | Msa0839040 | 0.805990 | 1.022389e-49 | -8.615850e-47 |
| Msa0806930 | Msa0839040 | 0.819115 | 1.375669e-52 | -8.615850e-47 |
| Msa0816140 | Msa0839040 | 0.853601 | 2.145337e-61 | -8.615850e-47 |
| Msa0817100 | Msa0839040 | 0.814973 | 1.172684e-51 | -8.615850e-47 |
| Msa0824850 | Msa0839040 | 0.849534 | 3.040429e-60 | -8.615850e-47 |
| Msa0827800 | Msa0839040 | 0.944622 | 1.388869e-103 | -8.615850e-47 |
| Msa0831890 | Msa0839040 | 0.804324 | 2.281141e-49 | -8.615850e-47 |
| Msa0839040 | Msa0841930 | 0.812506 | 4.096783e-51 | -8.615850e-47 |
| Msa0839040 | Msa0863840 | 0.812541 | 4.026146e-51 | -8.615850e-47 |
| Msa0839040 | Msa0863850 | 0.817115 | 3.898960e-52 | -8.615850e-47 |
| Msa0839040 | Msa0863860 | 0.837085 | 6.398075e-57 | -8.615850e-47 |
| Msa0839040 | Msa0864160 | 0.828642 | 8.025849e-55 | -8.615850e-47 |
| Msa0839040 | Msa0867080 | 0.826651 | 2.413758e-54 | -8.615850e-47 |
| Msa0839040 | Msa0886370 | 0.806199 | 9.236277e-50 | -8.615850e-47 |
| Msa0839040 | Msa0896910 | 0.817946 | 2.532743e-52 | -8.615850e-47 |
| Msa0839040 | Msa0896920 | 0.840567 | 8.044077e-58 | -8.615850e-47 |
| Msa0839040 | Msa0896950 | 0.829586 | 4.739385e-55 | -8.615850e-47 |
| Msa0839040 | Msa0933610 | 0.817608 | 3.018770e-52 | -8.615850e-47 |
| Msa0839040 | Msa0962320 | 0.807303 | 5.398946e-50 | -8.615850e-47 |
| Msa0839040 | Msa0964510 | 0.805426 | 1.342895e-49 | -8.615850e-47 |
| Msa0839040 | Msa0970790 | 0.825398 | 4.790607e-54 | -8.615850e-47 |
| Msa0839040 | Msa0996980 | 0.809554 | 1.786687e-50 | -8.615850e-47 |
| Msa0839040 | Msa0996990 | 0.837431 | 5.220737e-57 | -8.615850e-47 |
| Msa0839040 | Msa1006170 | 0.803950 | 2.729695e-49 | -8.615850e-47 |
| Msa0839040 | Msa1007930 | 0.800549 | 1.368161e-48 | -8.615850e-47 |
| Msa0839040 | Msa1024480 | 0.821275 | 4.403703e-53 | -8.615850e-47 |
| Msa0839040 | Msa1029860 | 0.806456 | 8.152984e-50 | -8.615850e-47 |
| Msa0839040 | Msa1030320 | 0.819754 | 9.834981e-53 | -8.615850e-47 |
| Msa0839040 | Msa1031060 | 0.802732 | 4.879485e-49 | -8.615850e-47 |
| Msa0839040 | Msa1036020 | 0.822400 | 2.417759e-53 | -8.615850e-47 |
| Msa0839040 | Msa1041910 | 0.808556 | 2.922963e-50 | -8.615850e-47 |
| Msa0839040 | Msa1047300 | 0.806579 | 7.682208e-50 | -8.615850e-47 |
| Msa0839040 | Msa1047340 | 0.806138 | 9.513279e-50 | -8.615850e-47 |
| Msa0839040 | Msa1048390 | 0.834757 | 2.492355e-56 | -8.615850e-47 |
| Msa0839040 | Msa1049400 | 0.804642 | 1.958355e-49 | -8.615850e-47 |
| Msa0839040 | Msa1061670 | 0.819621 | 1.055163e-52 | -8.615850e-47 |
| Msa0839040 | Msa1063260 | 0.803436 | 3.489055e-49 | -8.615850e-47 |
| Msa0839040 | Msa1064940 | 0.833269 | 5.875056e-56 | -8.615850e-47 |
| Msa0839040 | Msa1068900 | 0.807140 | 5.847089e-50 | -8.615850e-47 |
| Msa0839040 | Msa1076280 | 0.834224 | 3.392144e-56 | -8.615850e-47 |
| Msa0839040 | Msa1084800 | 0.806074 | 9.814250e-50 | -8.615850e-47 |
| Msa0839040 | Msa1087370 | 0.807673 | 4.505917e-50 | -8.615850e-47 |
| Msa0839040 | Msa1099640 | 0.809705 | 1.657848e-50 | -8.615850e-47 |
| Msa0839040 | Msa1100330 | 0.824259 | 8.894671e-54 | -8.615850e-47 |
| Msa0839040 | Msa1103450 | 0.839682 | 1.369380e-57 | -8.615850e-47 |
| Msa0839040 | Msa1106680 | 0.821772 | 3.380620e-53 | -8.615850e-47 |
| Msa0839040 | Msa1106960 | 0.814670 | 1.369109e-51 | -8.615850e-47 |
| Msa0839040 | Msa1108560 | 0.801480 | 8.826331e-49 | -8.615850e-47 |
| Msa0839040 | Msa1108610 | 0.802047 | 6.751747e-49 | -8.615850e-47 |
| Msa0839040 | Msa1109540 | 0.801599 | 8.346753e-49 | -8.615850e-47 |
| Msa0839040 | Msa1115900 | 0.805774 | 1.134560e-49 | -8.615850e-47 |
| Msa0839040 | Msa1119670 | 0.818669 | 1.737865e-52 | -8.615850e-47 |
| Msa0839040 | Msa1120960 | 0.825592 | 4.310011e-54 | -8.615850e-47 |
| Msa0839040 | Msa1122550 | 0.823831 | 1.120535e-53 | -8.615850e-47 |
| Msa0839040 | Msa1123010 | 0.802970 | 4.357232e-49 | -8.615850e-47 |
| Msa0839040 | Msa1131300 | -0.822067 | 2.888059e-53 | -8.615850e-47 |
| Msa0839040 | Msa1133440 | -0.800205 | 1.607184e-48 | -8.615850e-47 |
| Msa0839040 | Msa1147010 | 0.825726 | 4.004910e-54 | -8.615850e-47 |
| Msa0839040 | Msa1147030 | 0.800032 | 1.743079e-48 | -8.615850e-47 |
| Msa0839040 | Msa1148210 | 0.807071 | 6.047072e-50 | -8.615850e-47 |
| Msa0839040 | Msa1153690 | 0.809425 | 1.904235e-50 | -8.615850e-47 |
| Msa0839040 | Msa1156240 | 0.804415 | 2.184281e-49 | -8.615850e-47 |
| Msa0839040 | Msa1157210 | 0.812249 | 4.662221e-51 | -8.615850e-47 |
| Msa0839040 | Msa1160540 | 0.817068 | 3.995249e-52 | -8.615850e-47 |
| Msa0839040 | Msa1163340 | 0.822970 | 1.781694e-53 | -8.615850e-47 |
| Msa0839040 | Msa1167960 | 0.811890 | 5.582280e-51 | -8.615850e-47 |
| Msa0839040 | Msa1170340 | 0.839350 | 1.669658e-57 | -8.615850e-47 |
| Msa0839040 | Msa1179190 | 0.804749 | 1.860800e-49 | -8.615850e-47 |
| Msa0839040 | Msa1191270 | 0.833369 | 5.548388e-56 | -8.615850e-47 |
| Msa0839040 | Msa1203650 | 0.801559 | 8.502553e-49 | -8.615850e-47 |
| Msa0839040 | Msa1206380 | 0.802457 | 5.560763e-49 | -8.615850e-47 |
| Msa0839040 | Msa1215540 | -0.814226 | 1.715944e-51 | -8.615850e-47 |
| Msa0839040 | Msa1223540 | 0.835242 | 1.880724e-56 | -8.615850e-47 |
| Msa0839040 | Msa1223620 | 0.818828 | 1.598473e-52 | -8.615850e-47 |
| Msa0839040 | Msa1223710 | 0.801925 | 7.152839e-49 | -8.615850e-47 |
| Msa0839040 | Msa1223960 | 0.823591 | 1.275445e-53 | -8.615850e-47 |
| Msa0839040 | Msa1223990 | 0.828189 | 1.032332e-54 | -8.615850e-47 |
| Msa0839040 | Msa1225850 | 0.811394 | 7.155000e-51 | -8.615850e-47 |
| Msa0839040 | Msa1228460 | -0.810426 | 1.159561e-50 | -8.615850e-47 |
| Msa0839040 | Msa1233620 | 0.806008 | 1.013426e-49 | -8.615850e-47 |
| Msa0839040 | Msa1238250 | 0.801044 | 1.083860e-48 | -8.615850e-47 |
| Msa0839040 | Msa1255710 | 0.821798 | 3.334343e-53 | -8.615850e-47 |
| Msa0839040 | Msa1263110 | 0.820782 | 5.717820e-53 | -8.615850e-47 |
| Msa0839040 | Msa1263120 | 0.803144 | 4.010005e-49 | -8.615850e-47 |
| Msa0839040 | Msa1263520 | 0.827308 | 1.681128e-54 | -8.615850e-47 |
| Msa0839040 | Msa1269730 | -0.803053 | 4.189119e-49 | -8.615850e-47 |
| Msa0839040 | Msa1273320 | 0.832211 | 1.076045e-55 | -8.615850e-47 |
| Msa0839040 | Msa1295210 | -0.800976 | 1.119522e-48 | -8.615850e-47 |
| Msa0839040 | Msa1314020 | 0.804838 | 1.782811e-49 | -8.615850e-47 |
| Msa0839040 | Msa1316960 | 0.804788 | 1.826198e-49 | -8.615850e-47 |
| Msa0839040 | Msa1319190 | 0.800126 | 1.668443e-48 | -8.615850e-47 |
| Msa0839040 | Msa1338510 | 0.806691 | 7.275633e-50 | -8.615850e-47 |
| Msa0839040 | Msa1355340 | 0.828748 | 7.565741e-55 | -8.615850e-47 |
| Msa0839040 | Msa1357840 | 0.824732 | 6.881544e-54 | -8.615850e-47 |
| Msa0839040 | Msa1375650 | -0.801035 | 1.088529e-48 | -8.615850e-47 |
| Msa0839040 | Msa1378950 | 0.835321 | 1.795815e-56 | -8.615850e-47 |
| Msa0839040 | Msa1387480 | 0.850809 | 1.335151e-60 | -8.615850e-47 |
| Msa0839040 | Msa1400290 | -0.803431 | 3.498438e-49 | -8.615850e-47 |
| Msa0839040 | Msa1404810 | -0.801354 | 9.367855e-49 | -8.615850e-47 |
| Msa0839040 | Msa1405830 | 0.814385 | 1.582905e-51 | -8.615850e-47 |
| Msa0839040 | Msa1407810 | 0.803931 | 2.753646e-49 | -8.615850e-47 |
| Msa0839040 | Msa1411550 | 0.827019 | 1.971062e-54 | -8.615850e-47 |
| Msa0839040 | Msa1417220 | 0.813287 | 2.762871e-51 | -8.615850e-47 |
| Msa0839040 | Msa1437780 | 0.804345 | 2.259276e-49 | -8.615850e-47 |
| Msa0839040 | Msa1441300 | 0.810721 | 1.001119e-50 | -8.615850e-47 |
| Msa0839040 | Msa1441450 | 0.850346 | 1.802213e-60 | -8.615850e-47 |
| Msa0839040 | Msa1445780 | 0.811465 | 6.906547e-51 | -8.615850e-47 |
| Msa0839040 | Msa1453650 | 0.817347 | 3.456518e-52 | -8.615850e-47 |
| Msa0839040 | Msa1455360 | 0.827976 | 1.161900e-54 | -8.615850e-47 |
| Msa0839040 | Msa1456600 | 0.822583 | 2.191556e-53 | -8.615850e-47 |
| Msa0839040 | Msa1458270 | 0.845569 | 3.741591e-59 | -8.615850e-47 |
| Msa0839040 | Msa1459610 | 0.803575 | 3.264565e-49 | -8.615850e-47 |
| Msa0839040 | Msa1461660 | 0.835459 | 1.657936e-56 | -8.615850e-47 |
| Msa0839040 | Msa1462610 | 0.813666 | 2.279967e-51 | -8.615850e-47 |
| Msa0839040 | Msa1466130 | 0.808452 | 3.076455e-50 | -8.615850e-47 |
| Msa0121320 | Msa0839040 | 0.807783 | 4.270000e-50 | -8.615850e-47 |
| Msa0122170 | Msa0839040 | -0.805484 | 1.305490e-49 | -8.615850e-47 |
| Msa0125600 | Msa0839040 | 0.832185 | 1.092123e-55 | -8.615850e-47 |
| Msa0128110 | Msa0839040 | -0.807949 | 3.935885e-50 | -8.615850e-47 |
| Msa0130710 | Msa0839040 | 0.805144 | 1.538143e-49 | -8.615850e-47 |
| Msa0132250 | Msa0839040 | 0.833133 | 6.353497e-56 | -8.615850e-47 |
| Msa0136090 | Msa0839040 | 0.807254 | 5.528710e-50 | -8.615850e-47 |
| Msa0136180 | Msa0839040 | -0.810350 | 1.204334e-50 | -8.615850e-47 |
| Msa0137010 | Msa0839040 | -0.810433 | 1.155747e-50 | -8.615850e-47 |
| Msa0163690 | Msa0839040 | 0.839828 | 1.254342e-57 | -8.615850e-47 |
| Msa0170080 | Msa0839040 | 0.810400 | 1.174474e-50 | -8.615850e-47 |
| Msa0175060 | Msa0839040 | 0.814680 | 1.361913e-51 | -8.615850e-47 |
| Msa0176600 | Msa0839040 | 0.801241 | 9.879002e-49 | -8.615850e-47 |
| Msa0184390 | Msa0839040 | 0.947499 | 5.974404e-106 | -8.615850e-47 |
| Msa0189150 | Msa0839040 | -0.802778 | 4.773885e-49 | -8.615850e-47 |
| Msa0190670 | Msa0839040 | 0.824018 | 1.013279e-53 | -8.615850e-47 |
| Msa0207640 | Msa0839040 | 0.814605 | 1.415289e-51 | -8.615850e-47 |
| Msa0218060 | Msa0839040 | 0.800713 | 1.266693e-48 | -8.615850e-47 |
| Msa0234120 | Msa0839040 | 0.814117 | 1.813993e-51 | -8.615850e-47 |
| Msa0370620 | Msa0839040 | 0.820801 | 5.660523e-53 | -8.615850e-47 |
| Msa0374040 | Msa0839040 | 0.805610 | 1.228670e-49 | -8.615850e-47 |
| Msa0396790 | Msa0839040 | 0.817800 | 2.732201e-52 | -8.615850e-47 |
| Msa0396860 | Msa0839040 | 0.819509 | 1.118719e-52 | -8.615850e-47 |
| Msa0404070 | Msa0839040 | -0.811590 | 6.488055e-51 | -8.615850e-47 |
| Msa0410560 | Msa0839040 | 0.800400 | 1.467324e-48 | -8.615850e-47 |
| Msa0414480 | Msa0839040 | 0.838954 | 2.115685e-57 | -8.615850e-47 |
| Msa0418160 | Msa0839040 | 0.838058 | 3.603107e-57 | -8.615850e-47 |
| Msa0423200 | Msa0839040 | 0.810322 | 1.220885e-50 | -8.615850e-47 |
| Msa0423220 | Msa0839040 | 0.806091 | 9.733922e-50 | -8.615850e-47 |
| Msa0444210 | Msa0839040 | 0.800977 | 1.118984e-48 | -8.615850e-47 |
| Msa0444400 | Msa0839040 | 0.828194 | 1.029553e-54 | -8.615850e-47 |
| Msa0449500 | Msa0839040 | 0.803299 | 3.724540e-49 | -8.615850e-47 |
| Msa0454160 | Msa0839040 | 0.828534 | 8.522283e-55 | -8.615850e-47 |
| Msa0464300 | Msa0839040 | 0.804549 | 2.047914e-49 | -8.615850e-47 |
| Msa0464310 | Msa0839040 | 0.840983 | 6.258659e-58 | -8.615850e-47 |
| Msa0269240 | Msa0839040 | 0.856022 | 4.259250e-62 | -8.615850e-47 |
| Msa0270730 | Msa0839040 | -0.800109 | 1.681782e-48 | -8.615850e-47 |
| Msa0274250 | Msa0839040 | 0.817048 | 4.035943e-52 | -8.615850e-47 |
| Msa0278460 | Msa0839040 | 0.830990 | 2.151437e-55 | -8.615850e-47 |
| Msa0278950 | Msa0839040 | 0.811978 | 5.341254e-51 | -8.615850e-47 |
| Msa0279810 | Msa0839040 | 0.824447 | 8.032262e-54 | -8.615850e-47 |
| Msa0307630 | Msa0839040 | 0.811192 | 7.917023e-51 | -8.615850e-47 |
| Msa0314440 | Msa0839040 | 0.805858 | 1.089897e-49 | -8.615850e-47 |
| Msa0318360 | Msa0839040 | 0.815917 | 7.231040e-52 | -8.615850e-47 |
| Msa0319220 | Msa0839040 | 0.818355 | 2.046966e-52 | -8.615850e-47 |
| Msa0328090 | Msa0839040 | 0.809025 | 2.320482e-50 | -8.615850e-47 |
| Msa0349910 | Msa0839040 | 0.815338 | 9.731286e-52 | -8.615850e-47 |
| Msa0354600 | Msa0839040 | 0.816168 | 6.355280e-52 | -8.615850e-47 |
| Msa0356270 | Msa0839040 | 0.805679 | 1.188304e-49 | -8.615850e-47 |
| Msa0361700 | Msa0839040 | 0.804207 | 2.413161e-49 | -8.615850e-47 |
| Msa0487100 | Msa0839040 | 0.808333 | 3.260368e-50 | -8.615850e-47 |
| Msa0487110 | Msa0839040 | 0.806715 | 7.188242e-50 | -8.615850e-47 |
| Msa0491950 | Msa0839040 | 0.810133 | 1.341296e-50 | -8.615850e-47 |
| Msa0497680 | Msa0839040 | 0.822136 | 2.783866e-53 | -8.615850e-47 |
| Msa0535570 | Msa0839040 | 0.800935 | 1.141355e-48 | -8.615850e-47 |
| Msa0538440 | Msa0839040 | 0.820027 | 8.518323e-53 | -8.615850e-47 |
| Msa0538450 | Msa0839040 | 0.809079 | 2.258921e-50 | -8.615850e-47 |
| Msa0538520 | Msa0839040 | 0.810297 | 1.236559e-50 | -8.615850e-47 |
| Msa0538530 | Msa0839040 | 0.818762 | 1.654925e-52 | -8.615850e-47 |
| Msa0545680 | Msa0839040 | 0.810995 | 8.734257e-51 | -8.615850e-47 |
| Msa0548260 | Msa0839040 | -0.810221 | 1.283861e-50 | -8.615850e-47 |
| Msa0549170 | Msa0839040 | 0.850770 | 1.369957e-60 | -8.615850e-47 |
| Msa0554660 | Msa0839040 | 0.812746 | 3.630964e-51 | -8.615850e-47 |
| Msa0561830 | Msa0839040 | 0.805162 | 1.525257e-49 | -8.615850e-47 |
| Msa0567330 | Msa0839040 | 0.800583 | 1.346543e-48 | -8.615850e-47 |
| Msa0587730 | Msa0839040 | 0.801405 | 9.146439e-49 | -8.615850e-47 |
| Msa0589740 | Msa0839040 | 0.818734 | 1.679763e-52 | -8.615850e-47 |
| Msa0591490 | Msa0839040 | 0.803048 | 4.198874e-49 | -8.615850e-47 |
| Msa0594330 | Msa0839040 | 0.815003 | 1.154975e-51 | -8.615850e-47 |
| Msa0601400 | Msa0839040 | 0.814301 | 1.652261e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839040 | MtrunA17_Chr5g0406871 | 88.452 | 788 | 8 | 3 | 2 | 706 | 80 | 867 | 0.0 | 1399 |
| Msa0839040 | MtrunA17_Chr8g0343031 | 76.777 | 788 | 99 | 4 | 2 | 706 | 79 | 865 | 0.0 | 1228 |
| Msa0839040 | MtrunA17_Chr8g0343021 | 75.635 | 788 | 108 | 4 | 2 | 706 | 78 | 864 | 0.0 | 1211 |
| Msa0839040 | MtrunA17_Chr2g0329901 | 67.005 | 788 | 175 | 7 | 2 | 706 | 78 | 863 | 0.0 | 1073 |
| Msa0839040 | MtrunA17_Chr8g0342881 | 63.797 | 790 | 198 | 8 | 3 | 706 | 69 | 856 | 0.0 | 1016 |
| Msa0839040 | MtrunA17_Chr2g0329911 | 63.797 | 790 | 200 | 6 | 2 | 706 | 73 | 861 | 0.0 | 1014 |
| Msa0839040 | MtrunA17_Chr3g0120071 | 60.759 | 790 | 218 | 8 | 4 | 706 | 74 | 858 | 0.0 | 961 |
| Msa0839040 | MtrunA17_Chr8g0342971 | 58.987 | 790 | 237 | 7 | 3 | 706 | 82 | 870 | 0.0 | 952 |
| Msa0839040 | MtrunA17_Chr8g0342891 | 59.241 | 790 | 234 | 8 | 3 | 706 | 74 | 861 | 0.0 | 945 |
| Msa0839040 | MtrunA17_Chr8g0342921 | 59.039 | 791 | 236 | 8 | 2 | 706 | 81 | 869 | 0.0 | 936 |
| Msa0839040 | MtrunA17_Chr8g0343011 | 57.522 | 791 | 243 | 8 | 2 | 706 | 82 | 865 | 0.0 | 929 |
| Msa0839040 | MtrunA17_Chr8g0342951 | 59.798 | 791 | 230 | 8 | 2 | 706 | 80 | 868 | 0.0 | 924 |
| Msa0839040 | MtrunA17_Chr8g0344211 | 57.775 | 791 | 246 | 8 | 2 | 706 | 80 | 868 | 0.0 | 917 |
| Msa0839040 | MtrunA17_Chr8g0342931 | 59.441 | 752 | 217 | 8 | 41 | 706 | 1 | 750 | 0.0 | 885 |
| Msa0839040 | MtrunA17_Chr8g0342901 | 56.298 | 778 | 241 | 13 | 3 | 706 | 76 | 828 | 0.0 | 850 |
| Msa0839040 | MtrunA17_Chr1g0191921 | 52.757 | 798 | 278 | 11 | 3 | 706 | 66 | 858 | 0.0 | 818 |
| Msa0839040 | MtrunA17_Chr8g0343001 | 54.987 | 762 | 271 | 13 | 2 | 706 | 61 | 807 | 0.0 | 816 |
| Msa0839040 | MtrunA17_Chr8g0342991 | 54.961 | 766 | 265 | 14 | 2 | 706 | 61 | 807 | 0.0 | 808 |
| Msa0839040 | MtrunA17_Chr7g0272791 | 51.870 | 802 | 285 | 13 | 2 | 706 | 70 | 867 | 0.0 | 797 |
| Msa0839040 | MtrunA17_Chr1g0205611 | 51.372 | 802 | 286 | 13 | 5 | 706 | 59 | 856 | 0.0 | 793 |
| Msa0839040 | MtrunA17_Chr8g0342981 | 49.442 | 807 | 273 | 16 | 2 | 706 | 50 | 823 | 0.0 | 725 |
| Msa0839040 | MtrunA17_Chr8g0344201 | 42.802 | 778 | 341 | 16 | 24 | 705 | 157 | 926 | 0.0 | 603 |
| Msa0839040 | MtrunA17_Chr3g0118651 | 39.687 | 766 | 361 | 13 | 35 | 706 | 145 | 903 | 1.11e-180 | 538 |
| Msa0839040 | MtrunA17_Chr4g0033171 | 42.291 | 707 | 313 | 14 | 91 | 706 | 23 | 725 | 1.33e-178 | 527 |
| Msa0839040 | MtrunA17_Chr8g0377101 | 39.767 | 772 | 362 | 17 | 31 | 706 | 152 | 916 | 1.39e-176 | 528 |
| Msa0839040 | MtrunA17_Chr8g0338451 | 37.913 | 786 | 378 | 18 | 4 | 688 | 73 | 849 | 1.10e-172 | 516 |
| Msa0839040 | MtrunA17_Chr3g0118641 | 38.351 | 764 | 374 | 13 | 35 | 706 | 144 | 902 | 1.21e-171 | 514 |
| Msa0839040 | MtrunA17_Chr4g0047281 | 39.605 | 760 | 363 | 18 | 26 | 705 | 151 | 894 | 4.07e-170 | 510 |
| Msa0839040 | MtrunA17_Chr3g0118621 | 38.562 | 765 | 372 | 13 | 35 | 706 | 106 | 865 | 2.12e-160 | 484 |
| Msa0839040 | MtrunA17_Chr8g0344241 | 57.320 | 403 | 137 | 3 | 338 | 706 | 60 | 461 | 4.66e-158 | 464 |
| Msa0839040 | MtrunA17_Chr6g0471951 | 39.770 | 435 | 220 | 7 | 276 | 671 | 53 | 484 | 1.96e-109 | 340 |
| Msa0839040 | MtrunA17_Chr7g0218231 | 56.881 | 109 | 46 | 1 | 369 | 476 | 24 | 132 | 1.34e-32 | 122 |
| Msa0839040 | MtrunA17_Chr6g0468081 | 55.056 | 89 | 39 | 1 | 389 | 476 | 1 | 89 | 1.16e-24 | 98.6 |
| Msa0839040 | MtrunA17_Chr3g0137991 | 43.651 | 126 | 52 | 3 | 583 | 706 | 1 | 109 | 5.49e-22 | 91.7 |
| Msa0839040 | MtrunA17_Chr7g0272781 | 50.000 | 62 | 31 | 0 | 599 | 660 | 8 | 69 | 2.40e-16 | 75.1 |
| Msa0839040 | MtrunA17_Chr2g0277191 | 50.000 | 56 | 28 | 0 | 580 | 635 | 58 | 113 | 3.85e-15 | 72.4 |
| Msa0839040 | MtrunA17_Chr4g0047271 | 41.758 | 91 | 52 | 1 | 616 | 705 | 1 | 91 | 5.33e-13 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0839040 | AT1G55020.1 | 53.567 | 799 | 269 | 12 | 3 | 706 | 68 | 859 | 0.0 | 831 |
| Msa0839040 | AT3G22400.1 | 49.628 | 806 | 298 | 13 | 5 | 706 | 85 | 886 | 0.0 | 766 |
| Msa0839040 | AT1G17420.1 | 42.597 | 770 | 339 | 14 | 31 | 706 | 159 | 919 | 0.0 | 593 |
| Msa0839040 | AT1G72520.1 | 42.065 | 775 | 347 | 13 | 26 | 706 | 160 | 926 | 0.0 | 593 |
| Msa0839040 | AT3G45140.1 | 41.078 | 779 | 347 | 18 | 26 | 706 | 132 | 896 | 0.0 | 542 |
| Msa0839040 | AT3G45140.2 | 41.569 | 765 | 335 | 18 | 40 | 706 | 4 | 754 | 0.0 | 537 |
| Msa0839040 | AT1G67560.1 | 40.333 | 781 | 352 | 17 | 27 | 706 | 150 | 917 | 9.15e-178 | 531 |
Find 161 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCATGCAGCTGTTAATTT+TGG | 0.118332 | 5_4:-13699383 | Msa0839040:CDS |
| TCAATAAGGGTTTGATATTT+TGG | 0.152933 | 5_4:+13699230 | None:intergenic |
| AACACAAATAATTTATTATT+TGG | 0.165515 | 5_4:+13698819 | None:intergenic |
| TTTGATTGGGATGCTGATTT+TGG | 0.190953 | 5_4:-13702458 | Msa0839040:CDS |
| TTATTATGTATTGTTGTATT+TGG | 0.214487 | 5_4:-13698858 | Msa0839040:three_prime_UTR |
| TTGAATTTGTTTGCAATTCA+TGG | 0.215771 | 5_4:-13702340 | Msa0839040:CDS |
| TTCACCATCTCATCATAATT+TGG | 0.225540 | 5_4:+13699287 | None:intergenic |
| CATTTACCATTCACTTTGAT+TGG | 0.244250 | 5_4:-13702472 | Msa0839040:CDS |
| TTACAAGCCTTTCAAAAGTT+TGG | 0.259729 | 5_4:-13699113 | Msa0839040:CDS |
| TGGTCGAAAACCAACTAAAA+AGG | 0.263615 | 5_4:-13701899 | Msa0839040:CDS |
| TCTTGAATATTCTGCATCTT+AGG | 0.264727 | 5_4:+13699449 | None:intergenic |
| GGATCTAGCAACTTGTTAAT+AGG | 0.291816 | 5_4:+13700039 | None:intergenic |
| CTACTTTGTAGTGTATTTGT+TGG | 0.298685 | 5_4:-13698743 | Msa0839040:three_prime_UTR |
| GAAGATGGATTAACCTTTAG+AGG | 0.309941 | 5_4:-13698978 | Msa0839040:CDS |
| GAGAGAGGGATGTTAAGTTT+TGG | 0.326208 | 5_4:-13699154 | Msa0839040:CDS |
| ATTTATTGTGTCACGGAAAT+GGG | 0.326994 | 5_4:+13700017 | None:intergenic |
| CTTATGGAACAGGCACTTAA+TGG | 0.333183 | 5_4:-13700587 | Msa0839040:intron |
| TATTATGTATTGTTGTATTT+GGG | 0.336217 | 5_4:-13698857 | Msa0839040:three_prime_UTR |
| AGTGTATTTGTTGGTCTATA+TGG | 0.337238 | 5_4:-13698734 | Msa0839040:three_prime_UTR |
| GGATTTGGAGCTTACATCAT+TGG | 0.341118 | 5_4:+13702274 | None:intergenic |
| TATTTATTGTGTCACGGAAA+TGG | 0.341127 | 5_4:+13700016 | None:intergenic |
| CAGTTGACGGACTAGAGATA+TGG | 0.343179 | 5_4:-13699616 | Msa0839040:CDS |
| AATTCAACGGATTCACGATT+AGG | 0.343202 | 5_4:+13702356 | None:intergenic |
| CAATCACAGAAAGATCAATA+AGG | 0.347208 | 5_4:+13699216 | None:intergenic |
| TCTTGTCTGTAGAAGACTAA+TGG | 0.350358 | 5_4:+13702090 | None:intergenic |
| CATCCAAATGGTGTTAAGTA+TGG | 0.355834 | 5_4:-13700413 | Msa0839040:CDS |
| CATCAGCAGCATACAAGAAC+TGG | 0.362677 | 5_4:-13699906 | Msa0839040:CDS |
| GTTCAATACCACCTTCAAAT+AGG | 0.363395 | 5_4:+13701570 | None:intergenic |
| GCACCATACTTAACACCATT+TGG | 0.363952 | 5_4:+13700410 | None:intergenic |
| TTTATTATTTGGTAGTCAAT+TGG | 0.367942 | 5_4:+13698830 | None:intergenic |
| ATTTGAAACTTACTTGTAGA+AGG | 0.370231 | 5_4:+13701075 | None:intergenic |
| CTTCATCGTTCTAGTGAAGA+TGG | 0.384983 | 5_4:-13698993 | Msa0839040:CDS |
| TGGATGACTGACGAAGAATT+TGG | 0.388201 | 5_4:-13701137 | Msa0839040:CDS |
| TCTAGTCCGTCAACTGCATA+AGG | 0.389360 | 5_4:+13699623 | None:intergenic |
| TCGAAGCTATCAAACTCATT+TGG | 0.389705 | 5_4:+13701605 | None:intergenic |
| CAGTCCCTTACCGGTCCTTA+AGG | 0.394732 | 5_4:-13701522 | Msa0839040:CDS |
| GAGCAAAATCAGTCCCTTAC+CGG | 0.400018 | 5_4:-13701531 | Msa0839040:CDS |
| GATCTAGCAACTTGTTAATA+GGG | 0.403902 | 5_4:+13700040 | None:intergenic |
| CAAACAAGAGTATGCATTAG+AGG | 0.407786 | 5_4:-13698711 | Msa0839040:three_prime_UTR |
| TCATCTGACTTCCTTACATA+TGG | 0.412674 | 5_4:-13701695 | Msa0839040:CDS |
| GATGACATCTCAACAGAATT+CGG | 0.416030 | 5_4:+13699925 | None:intergenic |
| TGGAAGGAAGTTGTAGAAAA+AGG | 0.421210 | 5_4:-13699503 | Msa0839040:CDS |
| ATGTGGTAAACTCAACTCTA+TGG | 0.424161 | 5_4:+13700433 | None:intergenic |
| TAATTTGGAGTTCCTTTCTC+CGG | 0.424665 | 5_4:+13699302 | None:intergenic |
| TGTCCTAGTGGCATAAGCTT+TGG | 0.431901 | 5_4:+13700496 | None:intergenic |
| GATTTATAATAACATCTGTA+TGG | 0.435396 | 5_4:-13698895 | Msa0839040:three_prime_UTR |
| CTGTTTGTTGCTATGATGAA+TGG | 0.436847 | 5_4:+13700081 | None:intergenic |
| AAGCTTGCTCGTCCAGTCCT+TGG | 0.441085 | 5_4:-13701961 | Msa0839040:CDS |
| ATATGATAATGGAACATGAT+TGG | 0.444515 | 5_4:+13699420 | None:intergenic |
| GTTCCAAGAGATGAAAACTT+TGG | 0.447882 | 5_4:-13701728 | Msa0839040:CDS |
| ATTTACCATTCACTTTGATT+GGG | 0.449296 | 5_4:-13702471 | Msa0839040:CDS |
| TCAATAGACAATGTAGTAAG+TGG | 0.449297 | 5_4:+13698795 | None:intergenic |
| CTATCAACACCTTGGTCTGC+AGG | 0.450678 | 5_4:+13700368 | None:intergenic |
| GCAAATGGCAAGGGATTAGT+TGG | 0.452072 | 5_4:-13702557 | Msa0839040:CDS |
| CAGTGCGGAAAATTTCCTTA+AGG | 0.452424 | 5_4:+13701507 | None:intergenic |
| AATCATGTTCCATTATCATA+TGG | 0.452609 | 5_4:-13699418 | Msa0839040:CDS |
| GCTCCCAAGGTTGGTAGAGT+GGG | 0.452917 | 5_4:+13702506 | None:intergenic |
| TTCCTTATGTAAAATGCTCC+TGG | 0.457180 | 5_4:+13702431 | None:intergenic |
| AATCACAGAAAGATCAATAA+GGG | 0.464195 | 5_4:+13699217 | None:intergenic |
| ATTCAAATAGAGATACTGTT+GGG | 0.465250 | 5_4:+13698951 | None:intergenic |
| TGCATCTTGTCTTGCTCCCA+AGG | 0.467682 | 5_4:+13702493 | None:intergenic |
| GCAAGCTTGACATCTTCATC+TGG | 0.469750 | 5_4:+13701976 | None:intergenic |
| TTTGGAAGAGAGATGGTTGC+TGG | 0.470580 | 5_4:-13701119 | Msa0839040:CDS |
| CTTGCTCGTCCAGTCCTTGG+AGG | 0.472483 | 5_4:-13701958 | Msa0839040:CDS |
| CTTCTAACCCTTCGAGGGTA+AGG | 0.480584 | 5_4:+13701922 | None:intergenic |
| TCTTGTCTTGCTCCCAAGGT+TGG | 0.483250 | 5_4:+13702497 | None:intergenic |
| AGAAGCAGTCCATATGATAA+TGG | 0.483627 | 5_4:+13699409 | None:intergenic |
| TCAAAAGTTTGGAAGTAAGC+TGG | 0.485045 | 5_4:-13699102 | Msa0839040:CDS |
| CGACCACTTCTAACCCTTCG+AGG | 0.485068 | 5_4:+13701916 | None:intergenic |
| CGAAGATGGATCCCGGAGAA+AGG | 0.485557 | 5_4:-13699314 | Msa0839040:CDS |
| TACTGGACAACGAAAAGAAT+GGG | 0.494054 | 5_4:-13702040 | Msa0839040:CDS |
| TGCTCCCAAGGTTGGTAGAG+TGG | 0.496348 | 5_4:+13702505 | None:intergenic |
| TACCTCTTGATAAGTTCAGC+TGG | 0.498045 | 5_4:+13699862 | None:intergenic |
| AATGCTCTAATTAATGCTGA+TGG | 0.498741 | 5_4:-13699976 | Msa0839040:CDS |
| CGGAAAATTTCCTTAAGGAC+CGG | 0.498830 | 5_4:+13701512 | None:intergenic |
| TATGATGTCTACAATGATCT+TGG | 0.499215 | 5_4:-13702003 | Msa0839040:CDS |
| GTCCCCACTCTACCAACCTT+GGG | 0.499236 | 5_4:-13702509 | Msa0839040:CDS |
| ACTGTTGGGAATTCCTCTAA+AGG | 0.502768 | 5_4:+13698965 | None:intergenic |
| AATCTAAGAGGAGATGGTAC+TGG | 0.504050 | 5_4:-13702057 | Msa0839040:CDS |
| AATACAAGGAGACATAATCT+TGG | 0.506056 | 5_4:+13699573 | None:intergenic |
| GAAGAATTGCAAAATCTAAG+AGG | 0.508305 | 5_4:-13702069 | Msa0839040:CDS |
| GTGCTAGACCCTCCAAGGAC+TGG | 0.510390 | 5_4:+13701949 | None:intergenic |
| AATTTGGAGTTCCTTTCTCC+GGG | 0.512509 | 5_4:+13699303 | None:intergenic |
| CGTTGATATTTATTGTGTCA+CGG | 0.512648 | 5_4:+13700010 | None:intergenic |
| AGTAAGCTGGCCAAAATTGA+AGG | 0.513964 | 5_4:-13699089 | Msa0839040:CDS |
| AGCATCCCAATCAAAGTGAA+TGG | 0.517285 | 5_4:+13702466 | None:intergenic |
| CTAGTCCGTCAACTGCATAA+GGG | 0.521062 | 5_4:+13699624 | None:intergenic |
| ATCTCAACAGAATTCGGCCC+AGG | 0.524407 | 5_4:+13699931 | None:intergenic |
| AATGGAGCTGGTGTTTGACT+TGG | 0.524882 | 5_4:+13702108 | None:intergenic |
| AATTTCCTTAAGGACCGGTA+AGG | 0.525335 | 5_4:+13701517 | None:intergenic |
| TGTCCCCACTCTACCAACCT+TGG | 0.528094 | 5_4:-13702510 | Msa0839040:CDS |
| GTCCGACACTTAGTCGAAGA+TGG | 0.531477 | 5_4:-13699328 | Msa0839040:CDS |
| ATGAAATCTACCTTGGAGAG+AGG | 0.531981 | 5_4:-13699169 | Msa0839040:CDS |
| TTCAGAATATAACCTCCATA+AGG | 0.532169 | 5_4:+13699353 | None:intergenic |
| GACTACCCTTATGCAGTTGA+CGG | 0.533613 | 5_4:-13699629 | Msa0839040:CDS |
| CGAAGAATTTGGAAGAGAGA+TGG | 0.533979 | 5_4:-13701126 | Msa0839040:CDS |
| GCTTCTGATGAAATCTACCT+TGG | 0.534074 | 5_4:-13699176 | Msa0839040:CDS |
| AAAGTGTAGGGCAATTGCAC+CGG | 0.534813 | 5_4:+13699017 | None:intergenic |
| AACATCTGTATGGTGCTTGT+GGG | 0.539250 | 5_4:-13698885 | Msa0839040:three_prime_UTR |
| TTGAGTTTACCACATCCAAA+TGG | 0.542511 | 5_4:-13700425 | Msa0839040:CDS |
| AGTTGACGGACTAGAGATAT+GGG | 0.546670 | 5_4:-13699615 | Msa0839040:CDS |
| TAAGAAAAGGATTGTCCTAG+TGG | 0.548685 | 5_4:+13700484 | None:intergenic |
| TACTTAACACCATTTGGATG+TGG | 0.549004 | 5_4:+13700416 | None:intergenic |
| GACCACTTCTAACCCTTCGA+GGG | 0.549674 | 5_4:+13701917 | None:intergenic |
| TTGCAAAATCTAAGAGGAGA+TGG | 0.549962 | 5_4:-13702063 | Msa0839040:CDS |
| ACACTGAATTACAAACTTGG+TGG | 0.550213 | 5_4:-13699523 | Msa0839040:CDS |
| TAACATCTGTATGGTGCTTG+TGG | 0.553818 | 5_4:-13698886 | Msa0839040:three_prime_UTR |
| AACTCCAAATTATGATGAGA+TGG | 0.555053 | 5_4:-13699291 | Msa0839040:CDS |
| AAACAAGAGTATGCATTAGA+GGG | 0.555405 | 5_4:-13698710 | Msa0839040:three_prime_UTR |
| AATTCAAATAGAGATACTGT+TGG | 0.555796 | 5_4:+13698950 | None:intergenic |
| TGAAATCTACCTTGGAGAGA+GGG | 0.557296 | 5_4:-13699168 | Msa0839040:CDS |
| ATGACACTGAATTACAAACT+TGG | 0.557584 | 5_4:-13699526 | Msa0839040:CDS |
| TGAATTGCAAACAAATTCAA+CGG | 0.559629 | 5_4:+13702343 | None:intergenic |
| ATTTCCTTAAGGACCGGTAA+GGG | 0.560193 | 5_4:+13701518 | None:intergenic |
| ATGGGATGCTATTAAGTCAT+GGG | 0.562373 | 5_4:-13699597 | Msa0839040:CDS |
| TGGCCTTCGTCTTGTGATCG+AGG | 0.568239 | 5_4:-13699651 | Msa0839040:CDS |
| GAACGATGAAGCAAAGTGTA+GGG | 0.570006 | 5_4:+13699005 | None:intergenic |
| TTGCTCGTCCAGTCCTTGGA+GGG | 0.571582 | 5_4:-13701957 | Msa0839040:CDS |
| ATGCCAAAGCTTATGCCACT+AGG | 0.574343 | 5_4:-13700499 | Msa0839040:CDS |
| AAGATTACAGATTTAAACAA+AGG | 0.575473 | 5_4:+13701644 | None:intergenic |
| AAACTCAACTCTATGGCCAC+TGG | 0.582518 | 5_4:+13700440 | None:intergenic |
| ACTTAACATCCCTCTCTCCA+AGG | 0.586823 | 5_4:+13699159 | None:intergenic |
| AGAACGATGAAGCAAAGTGT+AGG | 0.586872 | 5_4:+13699004 | None:intergenic |
| GCACTCATCCTTACCCTCGA+AGG | 0.587455 | 5_4:-13701930 | Msa0839040:CDS |
| TTCTGCATCTTAGGCCACCA+TGG | 0.587934 | 5_4:+13699458 | None:intergenic |
| TATGGGATGCTATTAAGTCA+TGG | 0.588056 | 5_4:-13699598 | Msa0839040:CDS |
| ATCATCTTGCCTGCAGACCA+AGG | 0.588962 | 5_4:-13700377 | Msa0839040:intron |
| TTTGGACAATATCCTTATGG+AGG | 0.593205 | 5_4:-13699365 | Msa0839040:CDS |
| CTGTAGAAGACTAATGGAGC+TGG | 0.594388 | 5_4:+13702096 | None:intergenic |
| CGAAGGCCATGTGGAGACGA+TGG | 0.595336 | 5_4:+13699665 | None:intergenic |
| TAATGCTGATGGAATCATAG+AGG | 0.596258 | 5_4:-13699965 | Msa0839040:CDS |
| CACTCATCCTTACCCTCGAA+GGG | 0.596982 | 5_4:-13701929 | Msa0839040:CDS |
| GTACTGGACAACGAAAAGAA+TGG | 0.597403 | 5_4:-13702041 | Msa0839040:CDS |
| CTTGGAACATACATCACACC+TGG | 0.601033 | 5_4:+13701743 | None:intergenic |
| TTCATCAATTGGATAATACA+AGG | 0.601876 | 5_4:+13699559 | None:intergenic |
| ATATAGAGGATTAGCAGTTG+AGG | 0.604087 | 5_4:-13699690 | Msa0839040:intron |
| GATGAGTGCTAGACCCTCCA+AGG | 0.604496 | 5_4:+13701944 | None:intergenic |
| TGAATTACAAACTTGGTGGA+AGG | 0.608098 | 5_4:-13699519 | Msa0839040:CDS |
| ACTTAGTCGAAGATGGATCC+CGG | 0.609977 | 5_4:-13699321 | Msa0839040:CDS |
| TTTATTGTGTCACGGAAATG+GGG | 0.616340 | 5_4:+13700018 | None:intergenic |
| TGTAGAAGGCGAATCACACA+AGG | 0.616729 | 5_4:+13701089 | None:intergenic |
| CGTGACACAATAAATATCAA+CGG | 0.620852 | 5_4:-13700009 | Msa0839040:CDS |
| TTATAGTTAGCAAATCTGCA+TGG | 0.622128 | 5_4:-13701157 | Msa0839040:intron |
| TACCAGCTGAACTTATCAAG+AGG | 0.624556 | 5_4:-13699864 | Msa0839040:intron |
| ATCAGCAGCATACAAGAACT+GGG | 0.628225 | 5_4:-13699905 | Msa0839040:CDS |
| ATCCATCTTCGACTAAGTGT+CGG | 0.630524 | 5_4:+13699326 | None:intergenic |
| TACCCTCGAAGGGTTAGAAG+TGG | 0.635885 | 5_4:-13701919 | Msa0839040:CDS |
| CTCCCAAGGTTGGTAGAGTG+GGG | 0.636848 | 5_4:+13702507 | None:intergenic |
| TGATGGAACTTTGAAACCAG+TGG | 0.644367 | 5_4:-13700456 | Msa0839040:CDS |
| ATCACAAGACGAAGGCCATG+TGG | 0.656555 | 5_4:+13699656 | None:intergenic |
| GAGGATCCATCGTCTCCACA+TGG | 0.659512 | 5_4:-13699671 | Msa0839040:CDS |
| GAAGTGCGTGACCTATTTGA+AGG | 0.661942 | 5_4:-13701581 | Msa0839040:CDS |
| AACAAGAGTATGCATTAGAG+GGG | 0.673097 | 5_4:-13698709 | Msa0839040:three_prime_UTR |
| ATCTTCGACTAAGTGTCGGA+CGG | 0.684688 | 5_4:+13699330 | None:intergenic |
| GTGACTTGAAAGACAAACCA+TGG | 0.687567 | 5_4:-13699475 | Msa0839040:CDS |
| GATCCTAAAAGTGAGAGACC+AGG | 0.704866 | 5_4:-13701761 | Msa0839040:CDS |
| AGTCCTCGATCACAAGACGA+AGG | 0.713341 | 5_4:+13699648 | None:intergenic |
| GTGCGTGACCTATTTGAAGG+TGG | 0.729776 | 5_4:-13701578 | Msa0839040:CDS |
| GGACTTGTTCACCATCAGTG+CGG | 0.739041 | 5_4:+13701492 | None:intergenic |
| ACTTGAAAGACAAACCATGG+TGG | 0.743773 | 5_4:-13699472 | Msa0839040:CDS |
| GTAGAAGGCGAATCACACAA+GGG | 0.752151 | 5_4:+13701090 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACACAAATAATTTATTATT+TGG | + | chr5_4:13702299-13702318 | None:intergenic | 10.0% |
| !!! | AACTTTTTTAATTAAGGATT+TGG | + | chr5_4:13698859-13698878 | None:intergenic | 15.0% |
| !!! | AATTGTTCCATTTTAATTTT+TGG | - | chr5_4:13698912-13698931 | Msa0839040:three_prime_UTR | 15.0% |
| !! | TGATAGAAAAAAAATATTAG+TGG | + | chr5_4:13700142-13700161 | None:intergenic | 15.0% |
| !! | GAGTTAAAAATATTAAATTG+TGG | + | chr5_4:13700272-13700291 | None:intergenic | 15.0% |
| !!! | TATTAAATTATTTTTTTGGC+AGG | - | chr5_4:13700301-13700320 | Msa0839040:intron | 15.0% |
| !! | ACATAAAAGTCATTATTAAT+TGG | - | chr5_4:13700459-13700478 | Msa0839040:CDS | 15.0% |
| !! | TTATTATGTATTGTTGTATT+TGG | - | chr5_4:13702257-13702276 | Msa0839040:intron | 15.0% |
| !! | TATTATGTATTGTTGTATTT+GGG | - | chr5_4:13702258-13702277 | Msa0839040:intron | 15.0% |
| !! | CAATTTCAAAAACTACAAAA+CGG | - | chr5_4:13698803-13698822 | Msa0839040:three_prime_UTR | 20.0% |
| !! | TATAGAGCCAAAAATTAAAA+TGG | + | chr5_4:13698922-13698941 | None:intergenic | 20.0% |
| !!! | AAAAAATTACCCTTTTTAGT+TGG | + | chr5_4:13699229-13699248 | None:intergenic | 20.0% |
| !!! | ATGATTTTATTCCATATGTA+AGG | + | chr5_4:13699434-13699453 | None:intergenic | 20.0% |
| !! | AAGATTACAGATTTAAACAA+AGG | + | chr5_4:13699474-13699493 | None:intergenic | 20.0% |
| !! | CAAAGATATAAATATTGCAT+TGG | + | chr5_4:13699781-13699800 | None:intergenic | 20.0% |
| !! | GAATATATATTTATGGGAAA+TGG | + | chr5_4:13699843-13699862 | None:intergenic | 20.0% |
| !! | AAATATTAAATTGTGGAATG+TGG | + | chr5_4:13700265-13700284 | None:intergenic | 20.0% |
| !! | AGTGATTGAAATTATACTTA+TGG | - | chr5_4:13700512-13700531 | Msa0839040:CDS | 20.0% |
| !! | GATTTATAATAACATCTGTA+TGG | - | chr5_4:13702220-13702239 | Msa0839040:intron | 20.0% |
| !!! | TTTATTATTTGGTAGTCAAT+TGG | + | chr5_4:13702288-13702307 | None:intergenic | 20.0% |
| !!! | TTTAAAAAACGCATGATTTT+TGG | - | chr5_4:13702468-13702487 | Msa0839040:CDS | 20.0% |
| !!! | TTAAAAAACGCATGATTTTT+GGG | - | chr5_4:13702469-13702488 | Msa0839040:CDS | 20.0% |
| !!! | AGTTGGAAAAGAAGTATTTT+TGG | - | chr5_4:13698575-13698594 | Msa0839040:three_prime_UTR | 25.0% |
| ! | ATTTACCATTCACTTTGATT+GGG | - | chr5_4:13698644-13698663 | Msa0839040:intron | 25.0% |
| ! | TGAATTGCAAACAAATTCAA+CGG | + | chr5_4:13698775-13698794 | None:intergenic | 25.0% |
| !! | TTGAATTTGTTTGCAATTCA+TGG | - | chr5_4:13698775-13698794 | Msa0839040:three_prime_UTR | 25.0% |
| ! | AAATATGAGAGTCAATAATG+TGG | - | chr5_4:13699273-13699292 | Msa0839040:CDS | 25.0% |
| ! | TCATATGCCTCTATAAATAT+AGG | - | chr5_4:13699702-13699721 | Msa0839040:intron | 25.0% |
| ! | CATATGCCTCTATAAATATA+GGG | - | chr5_4:13699703-13699722 | Msa0839040:intron | 25.0% |
| !! | GTTTTTAACATGTGCTTTTA+GGG | + | chr5_4:13699744-13699763 | None:intergenic | 25.0% |
| !!! | TGTTTTTAACATGTGCTTTT+AGG | + | chr5_4:13699745-13699764 | None:intergenic | 25.0% |
| ! | AAGCACATGTTAAAAACAAT+TGG | - | chr5_4:13699747-13699766 | Msa0839040:intron | 25.0% |
| !! | ATTTGAAACTTACTTGTAGA+AGG | + | chr5_4:13700043-13700062 | None:intergenic | 25.0% |
| ! | TATCATATCTATATCCATGA+GGG | - | chr5_4:13700157-13700176 | Msa0839040:intron | 25.0% |
| !! | TGGAGCATTATTCATTAAAT+TGG | + | chr5_4:13700245-13700264 | None:intergenic | 25.0% |
| ! | TATACTAAAAAAAGAACAGC+TGG | - | chr5_4:13700376-13700395 | Msa0839040:intron | 25.0% |
| ! | TGAAATTATACTTATGGAAC+AGG | - | chr5_4:13700518-13700537 | Msa0839040:CDS | 25.0% |
| ! | TTGTTTATCTTCTCCAAAAA+TGG | + | chr5_4:13700594-13700613 | None:intergenic | 25.0% |
| !! | ATCCTTTTCTTAAAAGATGA+TGG | - | chr5_4:13700642-13700661 | Msa0839040:intron | 25.0% |
| !!! | TTCCATCATCTTTTAAGAAA+AGG | + | chr5_4:13700647-13700666 | None:intergenic | 25.0% |
| !!! | ACTTTTTTTCAATGTGTACT+AGG | - | chr5_4:13700987-13701006 | Msa0839040:intron | 25.0% |
| !!! | TAGCTACCGATTTTTTAAAT+TGG | + | chr5_4:13701357-13701376 | None:intergenic | 25.0% |
| ! | AAATTGTTTGCTTGATATAG+AGG | - | chr5_4:13701411-13701430 | Msa0839040:intron | 25.0% |
| ! | TTCATCAATTGGATAATACA+AGG | + | chr5_4:13701559-13701578 | None:intergenic | 25.0% |
| !!! | ATATGATAATGGAACATGAT+TGG | + | chr5_4:13701698-13701717 | None:intergenic | 25.0% |
| ! | AATCATGTTCCATTATCATA+TGG | - | chr5_4:13701697-13701716 | Msa0839040:CDS | 25.0% |
| !! | AATTTTGGACAATATCCTTA+TGG | - | chr5_4:13701747-13701766 | Msa0839040:CDS | 25.0% |
| !!! | TTCTCAAATATGCTTTTTGA+GGG | + | chr5_4:13701857-13701876 | None:intergenic | 25.0% |
| !! | TCAATAAGGGTTTGATATTT+TGG | + | chr5_4:13701888-13701907 | None:intergenic | 25.0% |
| ! | AATCACAGAAAGATCAATAA+GGG | + | chr5_4:13701901-13701920 | None:intergenic | 25.0% |
| !! | TGTGATTTTTCCTTCAATTT+TGG | + | chr5_4:13702039-13702058 | None:intergenic | 25.0% |
| ! | ATTCAAATAGAGATACTGTT+GGG | + | chr5_4:13702167-13702186 | None:intergenic | 25.0% |
| ! | AATTCAAATAGAGATACTGT+TGG | + | chr5_4:13702168-13702187 | None:intergenic | 25.0% |
| CATTTACCATTCACTTTGAT+TGG | - | chr5_4:13698643-13698662 | Msa0839040:intron | 30.0% | |
| GAAGAATTGCAAAATCTAAG+AGG | - | chr5_4:13699046-13699065 | Msa0839040:CDS | 30.0% | |
| TATGATGTCTACAATGATCT+TGG | - | chr5_4:13699112-13699131 | Msa0839040:CDS | 30.0% | |
| ! | ATTTTGCTCAATATGTGTGT+AGG | + | chr5_4:13699573-13699592 | None:intergenic | 30.0% |
| ! | TAGAGGCATATGATTGAATA+AGG | + | chr5_4:13699695-13699714 | None:intergenic | 30.0% |
| AATGGTAAAATTTACCCTGA+GGG | + | chr5_4:13699825-13699844 | None:intergenic | 30.0% | |
| AAATGGTAAAATTTACCCTG+AGG | + | chr5_4:13699826-13699845 | None:intergenic | 30.0% | |
| TTTATCGCTAATGCTAACAT+AGG | + | chr5_4:13699884-13699903 | None:intergenic | 30.0% | |
| TTATAGTTAGCAAATCTGCA+TGG | - | chr5_4:13699958-13699977 | Msa0839040:CDS | 30.0% | |
| CTATCATATCTATATCCATG+AGG | - | chr5_4:13700156-13700175 | Msa0839040:intron | 30.0% | |
| ! | TTGTAGTCTTTGAGAGATAT+TGG | - | chr5_4:13700193-13700212 | Msa0839040:intron | 30.0% |
| ! | TCTTTGAGAGATATTGGAAT+TGG | - | chr5_4:13700199-13700218 | Msa0839040:intron | 30.0% |
| ATTCATTAAATTGGCAGCAT+TGG | + | chr5_4:13700236-13700255 | None:intergenic | 30.0% | |
| AAATTGTACTATCAACACCT+TGG | + | chr5_4:13700758-13700777 | None:intergenic | 30.0% | |
| !! | AAGGTGTTGATAGTACAATT+TGG | - | chr5_4:13700757-13700776 | Msa0839040:intron | 30.0% |
| TGATAGTACAATTTGGCTAT+TGG | - | chr5_4:13700764-13700783 | Msa0839040:intron | 30.0% | |
| ATTTACAATTACATGAGCCT+TGG | + | chr5_4:13700790-13700809 | None:intergenic | 30.0% | |
| AGTGGTAGATTTAGTTAGTA+GGG | + | chr5_4:13700852-13700871 | None:intergenic | 30.0% | |
| ATAAAAAATGAGAGAGTGAG+TGG | + | chr5_4:13700870-13700889 | None:intergenic | 30.0% | |
| TGTGAAATGACCTAATATGA+CGG | - | chr5_4:13700915-13700934 | Msa0839040:intron | 30.0% | |
| !! | GATCTAGCAACTTGTTAATA+GGG | + | chr5_4:13701078-13701097 | None:intergenic | 30.0% |
| ATTTATTGTGTCACGGAAAT+GGG | + | chr5_4:13701101-13701120 | None:intergenic | 30.0% | |
| TATTTATTGTGTCACGGAAA+TGG | + | chr5_4:13701102-13701121 | None:intergenic | 30.0% | |
| CGTTGATATTTATTGTGTCA+CGG | + | chr5_4:13701108-13701127 | None:intergenic | 30.0% | |
| CGTGACACAATAAATATCAA+CGG | - | chr5_4:13701106-13701125 | Msa0839040:CDS | 30.0% | |
| AATGCTCTAATTAATGCTGA+TGG | - | chr5_4:13701139-13701158 | Msa0839040:CDS | 30.0% | |
| ! | ATAGAGGAAACATTTTTACC+TGG | - | chr5_4:13701166-13701185 | Msa0839040:intron | 30.0% |
| ! | TAGAGGAAACATTTTTACCT+GGG | - | chr5_4:13701167-13701186 | Msa0839040:intron | 30.0% |
| AAATATGCATCCAAGTTAGA+TGG | + | chr5_4:13701287-13701306 | None:intergenic | 30.0% | |
| ! | ATTTTTCTCTACCAATCTAG+CGG | - | chr5_4:13701331-13701350 | Msa0839040:intron | 30.0% |
| TAGCGGCCAATTTAAAAAAT+CGG | - | chr5_4:13701348-13701367 | Msa0839040:intron | 30.0% | |
| AATACAAGGAGACATAATCT+TGG | + | chr5_4:13701545-13701564 | None:intergenic | 30.0% | |
| ! | TTTTGTACTGCTTCATCAAT+TGG | + | chr5_4:13701570-13701589 | None:intergenic | 30.0% |
| ATGACACTGAATTACAAACT+TGG | - | chr5_4:13701589-13701608 | Msa0839040:CDS | 30.0% | |
| TCTTGAATATTCTGCATCTT+AGG | + | chr5_4:13701669-13701688 | None:intergenic | 30.0% | |
| TTCAGAATATAACCTCCATA+AGG | + | chr5_4:13701765-13701784 | None:intergenic | 30.0% | |
| AACTCCAAATTATGATGAGA+TGG | - | chr5_4:13701824-13701843 | Msa0839040:intron | 30.0% | |
| TTCACCATCTCATCATAATT+TGG | + | chr5_4:13701831-13701850 | None:intergenic | 30.0% | |
| !! | GTTCTCAAATATGCTTTTTG+AGG | + | chr5_4:13701858-13701877 | None:intergenic | 30.0% |
| CAATCACAGAAAGATCAATA+AGG | + | chr5_4:13701902-13701921 | None:intergenic | 30.0% | |
| TTACAAGCCTTTCAAAAGTT+TGG | - | chr5_4:13702002-13702021 | Msa0839040:CDS | 30.0% | |
| ! | CTTACTTCCAAACTTTTGAA+AGG | + | chr5_4:13702012-13702031 | None:intergenic | 30.0% |
| TCAATAGACAATGTAGTAAG+TGG | + | chr5_4:13702323-13702342 | None:intergenic | 30.0% | |
| CTACTTTGTAGTGTATTTGT+TGG | - | chr5_4:13702372-13702391 | Msa0839040:CDS | 30.0% | |
| ! | AGTGTATTTGTTGGTCTATA+TGG | - | chr5_4:13702381-13702400 | Msa0839040:CDS | 30.0% |
| ! | AAACAAGAGTATGCATTAGA+GGG | - | chr5_4:13702405-13702424 | Msa0839040:CDS | 30.0% |
| !!! | TTTGATTGGGATGCTGATTT+TGG | - | chr5_4:13698657-13698676 | Msa0839040:intron | 35.0% |
| !!! | TTCCAGGAGCATTTTACATA+AGG | - | chr5_4:13698682-13698701 | Msa0839040:three_prime_UTR | 35.0% |
| TTCCTTATGTAAAATGCTCC+TGG | + | chr5_4:13698687-13698706 | None:intergenic | 35.0% | |
| ! | AATTCAACGGATTCACGATT+AGG | + | chr5_4:13698762-13698781 | None:intergenic | 35.0% |
| TCTTGTCTGTAGAAGACTAA+TGG | + | chr5_4:13699028-13699047 | None:intergenic | 35.0% | |
| TTGCAAAATCTAAGAGGAGA+TGG | - | chr5_4:13699052-13699071 | Msa0839040:CDS | 35.0% | |
| TACTGGACAACGAAAAGAAT+GGG | - | chr5_4:13699075-13699094 | Msa0839040:CDS | 35.0% | |
| TGGTCGAAAACCAACTAAAA+AGG | - | chr5_4:13699216-13699235 | Msa0839040:CDS | 35.0% | |
| GGTCGAAAACCAACTAAAAA+GGG | - | chr5_4:13699217-13699236 | Msa0839040:CDS | 35.0% | |
| GTTCCAAGAGATGAAAACTT+TGG | - | chr5_4:13699387-13699406 | Msa0839040:CDS | 35.0% | |
| ! | TGTCCAAAGTTTTCATCTCT+TGG | + | chr5_4:13699393-13699412 | None:intergenic | 35.0% |
| TCATCTGACTTCCTTACATA+TGG | - | chr5_4:13699420-13699439 | Msa0839040:CDS | 35.0% | |
| TCGAAGCTATCAAACTCATT+TGG | + | chr5_4:13699513-13699532 | None:intergenic | 35.0% | |
| GTTCAATACCACCTTCAAAT+AGG | + | chr5_4:13699548-13699567 | None:intergenic | 35.0% | |
| AATGTACCTCTGATTACATG+TGG | + | chr5_4:13699663-13699682 | None:intergenic | 35.0% | |
| GCATGACCCTATATTTATAG+AGG | + | chr5_4:13699712-13699731 | None:intergenic | 35.0% | |
| AAAATTTACCCTGAGGGTTA+GGG | + | chr5_4:13699819-13699838 | None:intergenic | 35.0% | |
| TAAAATTTACCCTGAGGGTT+AGG | + | chr5_4:13699820-13699839 | None:intergenic | 35.0% | |
| ! | GCAATATCTAACGTGCTTTT+CGG | + | chr5_4:13700335-13700354 | None:intergenic | 35.0% |
| ACGTTAGATATTGCTGTGTA+TGG | - | chr5_4:13700341-13700360 | Msa0839040:intron | 35.0% | |
| !!! | TGATGCATTCATGCCATTTT+TGG | - | chr5_4:13700578-13700597 | Msa0839040:CDS | 35.0% |
| TAAGAAAAGGATTGTCCTAG+TGG | + | chr5_4:13700634-13700653 | None:intergenic | 35.0% | |
| ATGTGGTAAACTCAACTCTA+TGG | + | chr5_4:13700685-13700704 | None:intergenic | 35.0% | |
| TTGAGTTTACCACATCCAAA+TGG | - | chr5_4:13700690-13700709 | Msa0839040:intron | 35.0% | |
| TACTTAACACCATTTGGATG+TGG | + | chr5_4:13700702-13700721 | None:intergenic | 35.0% | |
| ! | CATCCAAATGGTGTTAAGTA+TGG | - | chr5_4:13700702-13700721 | Msa0839040:intron | 35.0% |
| GTGGTAGATTTAGTTAGTAG+GGG | + | chr5_4:13700851-13700870 | None:intergenic | 35.0% | |
| GAGTGGTAGATTTAGTTAGT+AGG | + | chr5_4:13700853-13700872 | None:intergenic | 35.0% | |
| ! | ACCTAATATGACGGTTTTTG+TGG | - | chr5_4:13700924-13700943 | Msa0839040:intron | 35.0% |
| TCCACAAAAACCGTCATATT+AGG | + | chr5_4:13700928-13700947 | None:intergenic | 35.0% | |
| ! | ATATGACGGTTTTTGTGGAA+CGG | - | chr5_4:13700929-13700948 | Msa0839040:intron | 35.0% |
| ! | CTGTTTGTTGCTATGATGAA+TGG | + | chr5_4:13701037-13701056 | None:intergenic | 35.0% |
| !! | GGATCTAGCAACTTGTTAAT+AGG | + | chr5_4:13701079-13701098 | None:intergenic | 35.0% |
| TTTATTGTGTCACGGAAATG+GGG | + | chr5_4:13701100-13701119 | None:intergenic | 35.0% | |
| TAATGCTGATGGAATCATAG+AGG | - | chr5_4:13701150-13701169 | Msa0839040:CDS | 35.0% | |
| GATGACATCTCAACAGAATT+CGG | + | chr5_4:13701193-13701212 | None:intergenic | 35.0% | |
| ! | TAATTTGCCACCATCTAACT+TGG | - | chr5_4:13701274-13701293 | Msa0839040:intron | 35.0% |
| ! | TTTTAAATTGGCCGCTAGAT+TGG | + | chr5_4:13701345-13701364 | None:intergenic | 35.0% |
| ! | ATATAGAGGATTAGCAGTTG+AGG | - | chr5_4:13701425-13701444 | Msa0839040:intron | 35.0% |
| TATGGGATGCTATTAAGTCA+TGG | - | chr5_4:13701517-13701536 | Msa0839040:CDS | 35.0% | |
| ATGGGATGCTATTAAGTCAT+GGG | - | chr5_4:13701518-13701537 | Msa0839040:CDS | 35.0% | |
| ACACTGAATTACAAACTTGG+TGG | - | chr5_4:13701592-13701611 | Msa0839040:CDS | 35.0% | |
| ! | TGAATTACAAACTTGGTGGA+AGG | - | chr5_4:13701596-13701615 | Msa0839040:CDS | 35.0% |
| TGGAAGGAAGTTGTAGAAAA+AGG | - | chr5_4:13701612-13701631 | Msa0839040:CDS | 35.0% | |
| GAAGTTGTAGAAAAAGGTCA+CGG | - | chr5_4:13701618-13701637 | Msa0839040:CDS | 35.0% | |
| AGAAGCAGTCCATATGATAA+TGG | + | chr5_4:13701709-13701728 | None:intergenic | 35.0% | |
| ! | CTTCATGCAGCTGTTAATTT+TGG | - | chr5_4:13701732-13701751 | Msa0839040:CDS | 35.0% |
| TTTGGACAATATCCTTATGG+AGG | - | chr5_4:13701750-13701769 | Msa0839040:CDS | 35.0% | |
| ! | TAATTTGGAGTTCCTTTCTC+CGG | + | chr5_4:13701816-13701835 | None:intergenic | 35.0% |
| TCAAAAGTTTGGAAGTAAGC+TGG | - | chr5_4:13702013-13702032 | Msa0839040:CDS | 35.0% | |
| !! | GAAGATGGATTAACCTTTAG+AGG | - | chr5_4:13702137-13702156 | Msa0839040:intron | 35.0% |
| ! | CAAACAAGAGTATGCATTAG+AGG | - | chr5_4:13702404-13702423 | Msa0839040:CDS | 35.0% |
| ! | AACAAGAGTATGCATTAGAG+GGG | - | chr5_4:13702406-13702425 | Msa0839040:CDS | 35.0% |
| AGCATCCCAATCAAAGTGAA+TGG | + | chr5_4:13698652-13698671 | None:intergenic | 40.0% | |
| !!! | GATGCTGATTTTGGAATTCC+AGG | - | chr5_4:13698666-13698685 | Msa0839040:intron | 40.0% |
| ! | GGATTTGGAGCTTACATCAT+TGG | + | chr5_4:13698844-13698863 | None:intergenic | 40.0% |
| AATCTAAGAGGAGATGGTAC+TGG | - | chr5_4:13699058-13699077 | Msa0839040:CDS | 40.0% | |
| GTACTGGACAACGAAAAGAA+TGG | - | chr5_4:13699074-13699093 | Msa0839040:CDS | 40.0% | |
| ATTTCCTTAAGGACCGGTAA+GGG | + | chr5_4:13699600-13699619 | None:intergenic | 40.0% | |
| AATTTCCTTAAGGACCGGTA+AGG | + | chr5_4:13699601-13699620 | None:intergenic | 40.0% | |
| CGGAAAATTTCCTTAAGGAC+CGG | + | chr5_4:13699606-13699625 | None:intergenic | 40.0% | |
| CAGTGCGGAAAATTTCCTTA+AGG | + | chr5_4:13699611-13699630 | None:intergenic | 40.0% | |
| ! | AAGGAAATTTTCCGCACTGA+TGG | - | chr5_4:13699612-13699631 | Msa0839040:CDS | 40.0% |
| TGGATGACTGACGAAGAATT+TGG | - | chr5_4:13699978-13699997 | Msa0839040:CDS | 40.0% | |
| CGAAGAATTTGGAAGAGAGA+TGG | - | chr5_4:13699989-13700008 | Msa0839040:CDS | 40.0% | |
| AGATCAAACTCTTACCCTCA+TGG | + | chr5_4:13700174-13700193 | None:intergenic | 40.0% | |
| ! | TATCTAACGTGCTTTTCGGT+GGG | + | chr5_4:13700331-13700350 | None:intergenic | 40.0% |
| ! | ATATCTAACGTGCTTTTCGG+TGG | + | chr5_4:13700332-13700351 | None:intergenic | 40.0% |
| GAACAGCTGGAGATTAATCT+AGG | - | chr5_4:13700389-13700408 | Msa0839040:CDS | 40.0% | |
| AGCTGGAGATTAATCTAGGT+GGG | - | chr5_4:13700393-13700412 | Msa0839040:CDS | 40.0% | |
| CTTATGGAACAGGCACTTAA+TGG | - | chr5_4:13700528-13700547 | Msa0839040:CDS | 40.0% | |
| !! | TGATGGAACTTTGAAACCAG+TGG | - | chr5_4:13700659-13700678 | Msa0839040:intron | 40.0% |
| GCACCATACTTAACACCATT+TGG | + | chr5_4:13700708-13700727 | None:intergenic | 40.0% | |
| TACAATTTGGCTATTGGCCA+AGG | - | chr5_4:13700770-13700789 | Msa0839040:intron | 40.0% | |
| ! | TAGGTTGAATACTCATGCAG+TGG | - | chr5_4:13701006-13701025 | Msa0839040:intron | 40.0% |
| ATCAGCAGCATACAAGAACT+GGG | - | chr5_4:13701210-13701229 | Msa0839040:intron | 40.0% | |
| TACCAGCTGAACTTATCAAG+AGG | - | chr5_4:13701251-13701270 | Msa0839040:intron | 40.0% | |
| TACCTCTTGATAAGTTCAGC+TGG | + | chr5_4:13701256-13701275 | None:intergenic | 40.0% | |
| TATGCATCCAAGTTAGATGG+TGG | + | chr5_4:13701284-13701303 | None:intergenic | 40.0% | |
| !! | AGTTGACGGACTAGAGATAT+GGG | - | chr5_4:13701500-13701519 | Msa0839040:intron | 40.0% |
| GTGACTTGAAAGACAAACCA+TGG | - | chr5_4:13701640-13701659 | Msa0839040:CDS | 40.0% | |
| ACTTGAAAGACAAACCATGG+TGG | - | chr5_4:13701643-13701662 | Msa0839040:CDS | 40.0% | |
| ATCCATCTTCGACTAAGTGT+CGG | + | chr5_4:13701792-13701811 | None:intergenic | 40.0% | |
| ! | AATTTGGAGTTCCTTTCTCC+GGG | + | chr5_4:13701815-13701834 | None:intergenic | 40.0% |
| GCTTCTGATGAAATCTACCT+TGG | - | chr5_4:13701939-13701958 | Msa0839040:CDS | 40.0% | |
| ATGAAATCTACCTTGGAGAG+AGG | - | chr5_4:13701946-13701965 | Msa0839040:CDS | 40.0% | |
| TGAAATCTACCTTGGAGAGA+GGG | - | chr5_4:13701947-13701966 | Msa0839040:CDS | 40.0% | |
| ! | GAGAGAGGGATGTTAAGTTT+TGG | - | chr5_4:13701961-13701980 | Msa0839040:CDS | 40.0% |
| AGTAAGCTGGCCAAAATTGA+AGG | - | chr5_4:13702026-13702045 | Msa0839040:CDS | 40.0% | |
| TCCGATCTGAAAAATCGAAC+TGG | - | chr5_4:13702074-13702093 | Msa0839040:CDS | 40.0% | |
| !! | CCCAGTTCGATTTTTCAGAT+CGG | + | chr5_4:13702078-13702097 | None:intergenic | 40.0% |
| CCGATCTGAAAAATCGAACT+GGG | - | chr5_4:13702075-13702094 | Msa0839040:CDS | 40.0% | |
| GAACGATGAAGCAAAGTGTA+GGG | + | chr5_4:13702113-13702132 | None:intergenic | 40.0% | |
| AGAACGATGAAGCAAAGTGT+AGG | + | chr5_4:13702114-13702133 | None:intergenic | 40.0% | |
| CTTCATCGTTCTAGTGAAGA+TGG | - | chr5_4:13702122-13702141 | Msa0839040:intron | 40.0% | |
| ACTGTTGGGAATTCCTCTAA+AGG | + | chr5_4:13702153-13702172 | None:intergenic | 40.0% | |
| TAACATCTGTATGGTGCTTG+TGG | - | chr5_4:13702229-13702248 | Msa0839040:intron | 40.0% | |
| AACATCTGTATGGTGCTTGT+GGG | - | chr5_4:13702230-13702249 | Msa0839040:intron | 40.0% | |
| ! | GCAAATGGCAAGGGATTAGT+TGG | - | chr5_4:13698558-13698577 | Msa0839040:three_prime_UTR | 45.0% |
| AATGGAGCTGGTGTTTGACT+TGG | + | chr5_4:13699010-13699029 | None:intergenic | 45.0% | |
| CTGTAGAAGACTAATGGAGC+TGG | + | chr5_4:13699022-13699041 | None:intergenic | 45.0% | |
| GCAAGCTTGACATCTTCATC+TGG | + | chr5_4:13699142-13699161 | None:intergenic | 45.0% | |
| GATCCTAAAAGTGAGAGACC+AGG | - | chr5_4:13699354-13699373 | Msa0839040:CDS | 45.0% | |
| !! | ACACCTGGTCTCTCACTTTT+AGG | + | chr5_4:13699360-13699379 | None:intergenic | 45.0% |
| CTTGGAACATACATCACACC+TGG | + | chr5_4:13699375-13699394 | None:intergenic | 45.0% | |
| GAAGTGCGTGACCTATTTGA+AGG | - | chr5_4:13699534-13699553 | Msa0839040:CDS | 45.0% | |
| GAGCAAAATCAGTCCCTTAC+CGG | - | chr5_4:13699584-13699603 | Msa0839040:CDS | 45.0% | |
| GTACCTCTGATTACATGTGG+TGG | + | chr5_4:13699660-13699679 | None:intergenic | 45.0% | |
| TTTGGAAGAGAGATGGTTGC+TGG | - | chr5_4:13699996-13700015 | Msa0839040:CDS | 45.0% | |
| GTAGAAGGCGAATCACACAA+GGG | + | chr5_4:13700028-13700047 | None:intergenic | 45.0% | |
| TGTAGAAGGCGAATCACACA+AGG | + | chr5_4:13700029-13700048 | None:intergenic | 45.0% | |
| CAGCTGGAGATTAATCTAGG+TGG | - | chr5_4:13700392-13700411 | Msa0839040:CDS | 45.0% | |
| ATGCCAAAGCTTATGCCACT+AGG | - | chr5_4:13700616-13700635 | Msa0839040:intron | 45.0% | |
| TGTCCTAGTGGCATAAGCTT+TGG | + | chr5_4:13700622-13700641 | None:intergenic | 45.0% | |
| AAACTCAACTCTATGGCCAC+TGG | + | chr5_4:13700678-13700697 | None:intergenic | 45.0% | |
| CATCAGCAGCATACAAGAAC+TGG | - | chr5_4:13701209-13701228 | Msa0839040:intron | 45.0% | |
| GACTACCCTTATGCAGTTGA+CGG | - | chr5_4:13701486-13701505 | Msa0839040:intron | 45.0% | |
| CTAGTCCGTCAACTGCATAA+GGG | + | chr5_4:13701494-13701513 | None:intergenic | 45.0% | |
| TCTAGTCCGTCAACTGCATA+AGG | + | chr5_4:13701495-13701514 | None:intergenic | 45.0% | |
| !! | CAGTTGACGGACTAGAGATA+TGG | - | chr5_4:13701499-13701518 | Msa0839040:intron | 45.0% |
| !! | ATCTTCGACTAAGTGTCGGA+CGG | + | chr5_4:13701788-13701807 | None:intergenic | 45.0% |
| ACTTAGTCGAAGATGGATCC+CGG | - | chr5_4:13701794-13701813 | Msa0839040:intron | 45.0% | |
| ACTTAACATCCCTCTCTCCA+AGG | + | chr5_4:13701959-13701978 | None:intergenic | 45.0% | |
| TCTGAAAAATCGAACTGGGC+CGG | - | chr5_4:13702079-13702098 | Msa0839040:CDS | 45.0% | |
| AAAGTGTAGGGCAATTGCAC+CGG | + | chr5_4:13702101-13702120 | None:intergenic | 45.0% | |
| !!! | ATAATTAACTTTTTTAATTA+AGG | + | chr5_4:13698865-13698884 | None:intergenic | 5.0% |
| !!! | CAATTAATATTTAATATTTT+AGG | + | chr5_4:13698966-13698985 | None:intergenic | 5.0% |
| !!! | AATTTAGAATATATATTTAT+GGG | + | chr5_4:13699849-13699868 | None:intergenic | 5.0% |
| !!! | TAATTTAGAATATATATTTA+TGG | + | chr5_4:13699850-13699869 | None:intergenic | 5.0% |
| !! | ATAAGAAATATATATTAAAT+TGG | + | chr5_4:13699934-13699953 | None:intergenic | 5.0% |
| !!! | ATTATTTACAATTTTTTTTT+TGG | - | chr5_4:13700091-13700110 | Msa0839040:CDS | 5.0% |
| !!! | ATTGTATTAAATTATTTTTT+TGG | - | chr5_4:13700297-13700316 | Msa0839040:intron | 5.0% |
| TCTTGTCTTGCTCCCAAGGT+TGG | + | chr5_4:13698621-13698640 | None:intergenic | 50.0% | |
| TGCATCTTGTCTTGCTCCCA+AGG | + | chr5_4:13698625-13698644 | None:intergenic | 50.0% | |
| CACTCATCCTTACCCTCGAA+GGG | - | chr5_4:13699186-13699205 | Msa0839040:CDS | 50.0% | |
| CTTCTAACCCTTCGAGGGTA+AGG | + | chr5_4:13699196-13699215 | None:intergenic | 50.0% | |
| TACCCTCGAAGGGTTAGAAG+TGG | - | chr5_4:13699196-13699215 | Msa0839040:CDS | 50.0% | |
| GACCACTTCTAACCCTTCGA+GGG | + | chr5_4:13699201-13699220 | None:intergenic | 50.0% | |
| GTGCGTGACCTATTTGAAGG+TGG | - | chr5_4:13699537-13699556 | Msa0839040:CDS | 50.0% | |
| ! | GGACTTGTTCACCATCAGTG+CGG | + | chr5_4:13699626-13699645 | None:intergenic | 50.0% |
| !! | CATGTGGTGGTGGAAACTTG+AGG | + | chr5_4:13699647-13699666 | None:intergenic | 50.0% |
| CCTCTGATTACATGTGGTGG+TGG | + | chr5_4:13699657-13699676 | None:intergenic | 50.0% | |
| CCACCACCACATGTAATCAG+AGG | - | chr5_4:13699654-13699673 | Msa0839040:CDS | 50.0% | |
| TAACATGTGCCCTAACCCTC+AGG | - | chr5_4:13699807-13699826 | Msa0839040:intron | 50.0% | |
| AACATGTGCCCTAACCCTCA+GGG | - | chr5_4:13699808-13699827 | Msa0839040:intron | 50.0% | |
| ! | AGGTGGGCTCACAGTAGAAA+AGG | - | chr5_4:13700409-13700428 | Msa0839040:CDS | 50.0% |
| ATCATCTTGCCTGCAGACCA+AGG | - | chr5_4:13700738-13700757 | Msa0839040:intron | 50.0% | |
| CTATCAACACCTTGGTCTGC+AGG | + | chr5_4:13700750-13700769 | None:intergenic | 50.0% | |
| ACCATCAACTCATGAGCCAC+TGG | - | chr5_4:13700820-13700839 | Msa0839040:intron | 50.0% | |
| ! | ACCAGTGGCTCATGAGTTGA+TGG | + | chr5_4:13700824-13700843 | None:intergenic | 50.0% |
| CAACTCATGAGCCACTGGTA+TGG | - | chr5_4:13700825-13700844 | Msa0839040:intron | 50.0% | |
| ATCTCAACAGAATTCGGCCC+AGG | + | chr5_4:13701187-13701206 | None:intergenic | 50.0% | |
| ATCACAAGACGAAGGCCATG+TGG | + | chr5_4:13701462-13701481 | None:intergenic | 50.0% | |
| AGTCCTCGATCACAAGACGA+AGG | + | chr5_4:13701470-13701489 | None:intergenic | 50.0% | |
| TTCTGCATCTTAGGCCACCA+TGG | + | chr5_4:13701660-13701679 | None:intergenic | 50.0% | |
| GTCCGACACTTAGTCGAAGA+TGG | - | chr5_4:13701787-13701806 | Msa0839040:intron | 50.0% | |
| TGTCCCCACTCTACCAACCT+TGG | - | chr5_4:13698605-13698624 | Msa0839040:three_prime_UTR | 55.0% | |
| GTCCCCACTCTACCAACCTT+GGG | - | chr5_4:13698606-13698625 | Msa0839040:three_prime_UTR | 55.0% | |
| !! | CTCCCAAGGTTGGTAGAGTG+GGG | + | chr5_4:13698611-13698630 | None:intergenic | 55.0% |
| !! | GCTCCCAAGGTTGGTAGAGT+GGG | + | chr5_4:13698612-13698631 | None:intergenic | 55.0% |
| !! | TGCTCCCAAGGTTGGTAGAG+TGG | + | chr5_4:13698613-13698632 | None:intergenic | 55.0% |
| ! | AAGCTTGCTCGTCCAGTCCT+TGG | - | chr5_4:13699154-13699173 | Msa0839040:CDS | 55.0% |
| TTGCTCGTCCAGTCCTTGGA+GGG | - | chr5_4:13699158-13699177 | Msa0839040:CDS | 55.0% | |
| GATGAGTGCTAGACCCTCCA+AGG | + | chr5_4:13699174-13699193 | None:intergenic | 55.0% | |
| GCACTCATCCTTACCCTCGA+AGG | - | chr5_4:13699185-13699204 | Msa0839040:CDS | 55.0% | |
| CGACCACTTCTAACCCTTCG+AGG | + | chr5_4:13699202-13699221 | None:intergenic | 55.0% | |
| CAGTCCCTTACCGGTCCTTA+AGG | - | chr5_4:13699593-13699612 | Msa0839040:CDS | 55.0% | |
| GTTAGTAGGGGCCATACCAG+TGG | + | chr5_4:13700839-13700858 | None:intergenic | 55.0% | |
| GAGGATCCATCGTCTCCACA+TGG | - | chr5_4:13701444-13701463 | Msa0839040:intron | 55.0% | |
| TGGCCTTCGTCTTGTGATCG+AGG | - | chr5_4:13701464-13701483 | Msa0839040:intron | 55.0% | |
| CGAAGATGGATCCCGGAGAA+AGG | - | chr5_4:13701801-13701820 | Msa0839040:intron | 55.0% | |
| CTTGCTCGTCCAGTCCTTGG+AGG | - | chr5_4:13699157-13699176 | Msa0839040:CDS | 60.0% | |
| GTGCTAGACCCTCCAAGGAC+TGG | + | chr5_4:13699169-13699188 | None:intergenic | 60.0% | |
| CGAAGGCCATGTGGAGACGA+TGG | + | chr5_4:13701453-13701472 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 13698555 | 13702582 | 13698555 | ID=Msa0839040;Name=Msa0839040 |
| chr5_4 | mRNA | 13698555 | 13702582 | 13698555 | ID=Msa0839040-mRNA-1;Parent=Msa0839040;Name=Msa0839040-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0.57|0.5|1|0.85|0.75|8|360|706 |
| chr5_4 | exon | 13698555 | 13698636 | 13698555 | ID=Msa0839040-mRNA-1:exon:6109;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13698675 | 13699706 | 13698675 | ID=Msa0839040-mRNA-1:exon:6108;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13699865 | 13700111 | 13699865 | ID=Msa0839040-mRNA-1:exon:6107;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13700378 | 13700597 | 13700378 | ID=Msa0839040-mRNA-1:exon:6106;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13701088 | 13701173 | 13701088 | ID=Msa0839040-mRNA-1:exon:6105;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13701504 | 13701782 | 13701504 | ID=Msa0839040-mRNA-1:exon:6104;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13701899 | 13702139 | 13701899 | ID=Msa0839040-mRNA-1:exon:6103;Parent=Msa0839040-mRNA-1 |
| chr5_4 | exon | 13702289 | 13702582 | 13702289 | ID=Msa0839040-mRNA-1:exon:6102;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13702289 | 13702582 | 13702289 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13701899 | 13702139 | 13701899 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13701504 | 13701782 | 13701504 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13701088 | 13701173 | 13701088 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13700378 | 13700597 | 13700378 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13699865 | 13700111 | 13699865 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | CDS | 13698953 | 13699706 | 13698953 | ID=Msa0839040-mRNA-1:cds;Parent=Msa0839040-mRNA-1 |
| chr5_4 | three_prime_UTR | 13698675 | 13698952 | 13698675 | ID=Msa0839040-mRNA-1:three_prime_utr;Parent=Msa0839040-mRNA-1 |
| chr5_4 | three_prime_UTR | 13698555 | 13698636 | 13698555 | ID=Msa0839040-mRNA-1:three_prime_utr;Parent=Msa0839040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
