Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25856.t1 | XP_003601330.1 | 94.3 | 228 | 13 | 0 | 1 | 228 | 1 | 228 | 4.60E-114 | 420.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25856.t1 | P93236 | 29.5 | 149 | 97 | 4 | 56 | 198 | 505 | 651 | 1.2e-06 | 55.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25856.t1 | G7J637 | 94.3 | 228 | 13 | 0 | 1 | 228 | 1 | 228 | 3.3e-114 | 420.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene25856 | 0.874756 | 5.27E-68 | -1.69E-46 |
| MS.gene049171 | MS.gene25856 | 0.875364 | 3.27E-68 | -1.69E-46 |
| MS.gene049173 | MS.gene25856 | 0.852944 | 3.31E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene25856 | 0.876827 | 1.02E-68 | -1.69E-46 |
| MS.gene049222 | MS.gene25856 | 0.895009 | 1.44E-75 | -1.69E-46 |
| MS.gene049232 | MS.gene25856 | 0.807512 | 4.87E-50 | -1.69E-46 |
| MS.gene049285 | MS.gene25856 | 0.913368 | 6.67E-84 | -1.69E-46 |
| MS.gene049320 | MS.gene25856 | 0.911323 | 6.92E-83 | -1.69E-46 |
| MS.gene04939 | MS.gene25856 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene25856 | 0.874978 | 4.43E-68 | -1.69E-46 |
| MS.gene049609 | MS.gene25856 | 0.90807 | 2.55E-81 | -1.69E-46 |
| MS.gene049614 | MS.gene25856 | 0.81879 | 1.63E-52 | -1.69E-46 |
| MS.gene049615 | MS.gene25856 | 0.808407 | 3.14E-50 | -1.69E-46 |
| MS.gene049627 | MS.gene25856 | 0.836557 | 8.73E-57 | -1.69E-46 |
| MS.gene049633 | MS.gene25856 | 0.832064 | 1.17E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene25856 | 0.812115 | 4.99E-51 | -1.69E-46 |
| MS.gene049805 | MS.gene25856 | 0.907065 | 7.58E-81 | -1.69E-46 |
| MS.gene050076 | MS.gene25856 | 0.842634 | 2.29E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene25856 | 0.847553 | 1.08E-59 | -1.69E-46 |
| MS.gene050163 | MS.gene25856 | 0.895847 | 6.49E-76 | -1.69E-46 |
| MS.gene050165 | MS.gene25856 | 0.871775 | 5.28E-67 | -1.69E-46 |
| MS.gene050323 | MS.gene25856 | 0.803063 | 4.17E-49 | -1.69E-46 |
| MS.gene050333 | MS.gene25856 | 0.876163 | 1.74E-68 | -1.69E-46 |
| MS.gene050432 | MS.gene25856 | 0.861632 | 8.95E-64 | -1.69E-46 |
| MS.gene050444 | MS.gene25856 | 0.828521 | 8.59E-55 | -1.69E-46 |
| MS.gene050504 | MS.gene25856 | 0.880723 | 4.34E-70 | -1.69E-46 |
| MS.gene050518 | MS.gene25856 | 0.872441 | 3.17E-67 | -1.69E-46 |
| MS.gene050520 | MS.gene25856 | 0.815433 | 9.27E-52 | -1.69E-46 |
| MS.gene050538 | MS.gene25856 | 0.861654 | 8.81E-64 | -1.69E-46 |
| MS.gene050547 | MS.gene25856 | -0.805207 | 1.49E-49 | -1.69E-46 |
| MS.gene050577 | MS.gene25856 | 0.855648 | 5.48E-62 | -1.69E-46 |
| MS.gene050593 | MS.gene25856 | 0.857301 | 1.79E-62 | -1.69E-46 |
| MS.gene050612 | MS.gene25856 | 0.874178 | 8.27E-68 | -1.69E-46 |
| MS.gene050675 | MS.gene25856 | 0.848409 | 6.24E-60 | -1.69E-46 |
| MS.gene050699 | MS.gene25856 | 0.890633 | 8.26E-74 | -1.69E-46 |
| MS.gene050747 | MS.gene25856 | 0.901351 | 2.92E-78 | -1.69E-46 |
| MS.gene050767 | MS.gene25856 | 0.853829 | 1.84E-61 | -1.69E-46 |
| MS.gene050770 | MS.gene25856 | 0.856169 | 3.86E-62 | -1.69E-46 |
| MS.gene050772 | MS.gene25856 | 0.918516 | 1.41E-86 | -1.69E-46 |
| MS.gene050781 | MS.gene25856 | 0.834705 | 2.57E-56 | -1.69E-46 |
| MS.gene050783 | MS.gene25856 | 0.81387 | 2.06E-51 | -1.69E-46 |
| MS.gene05080 | MS.gene25856 | 0.851433 | 8.90E-61 | -1.69E-46 |
| MS.gene05081 | MS.gene25856 | 0.809977 | 1.45E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene25856 | 0.823765 | 1.16E-53 | -1.69E-46 |
| MS.gene050871 | MS.gene25856 | 0.822557 | 2.22E-53 | -1.69E-46 |
| MS.gene050950 | MS.gene25856 | 0.891837 | 2.76E-74 | -1.69E-46 |
| MS.gene050986 | MS.gene25856 | 0.868045 | 8.74E-66 | -1.69E-46 |
| MS.gene05100 | MS.gene25856 | 0.898829 | 3.61E-77 | -1.69E-46 |
| MS.gene05105 | MS.gene25856 | 0.852827 | 3.57E-61 | -1.69E-46 |
| MS.gene051167 | MS.gene25856 | -0.815695 | 8.10E-52 | -1.69E-46 |
| MS.gene051228 | MS.gene25856 | 0.866893 | 2.04E-65 | -1.69E-46 |
| MS.gene051317 | MS.gene25856 | 0.813423 | 2.58E-51 | -1.69E-46 |
| MS.gene051387 | MS.gene25856 | 0.862335 | 5.45E-64 | -1.69E-46 |
| MS.gene051551 | MS.gene25856 | 0.8705 | 1.39E-66 | -1.69E-46 |
| MS.gene051666 | MS.gene25856 | 0.896202 | 4.63E-76 | -1.69E-46 |
| MS.gene051692 | MS.gene25856 | 0.818334 | 2.07E-52 | -1.69E-46 |
| MS.gene051694 | MS.gene25856 | 0.873067 | 1.96E-67 | -1.69E-46 |
| MS.gene051810 | MS.gene25856 | 0.877245 | 7.33E-69 | -1.69E-46 |
| MS.gene051838 | MS.gene25856 | 0.829319 | 5.50E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene25856 | 0.86708 | 1.78E-65 | -1.69E-46 |
| MS.gene051949 | MS.gene25856 | 0.840262 | 9.67E-58 | -1.69E-46 |
| MS.gene052164 | MS.gene25856 | 0.850268 | 1.89E-60 | -1.69E-46 |
| MS.gene052271 | MS.gene25856 | 0.867365 | 1.44E-65 | -1.69E-46 |
| MS.gene052290 | MS.gene25856 | 0.845305 | 4.41E-59 | -1.69E-46 |
| MS.gene052310 | MS.gene25856 | 0.808646 | 2.80E-50 | -1.69E-46 |
| MS.gene052322 | MS.gene25856 | 0.826546 | 2.56E-54 | -1.69E-46 |
| MS.gene052379 | MS.gene25856 | 0.882424 | 1.05E-70 | -1.69E-46 |
| MS.gene052421 | MS.gene25856 | 0.867478 | 1.33E-65 | -1.69E-46 |
| MS.gene052481 | MS.gene25856 | 0.817834 | 2.68E-52 | -1.69E-46 |
| MS.gene052482 | MS.gene25856 | 0.811613 | 6.41E-51 | -1.69E-46 |
| MS.gene052484 | MS.gene25856 | 0.834204 | 3.43E-56 | -1.69E-46 |
| MS.gene052486 | MS.gene25856 | 0.815946 | 7.12E-52 | -1.69E-46 |
| MS.gene052501 | MS.gene25856 | 0.852839 | 3.55E-61 | -1.69E-46 |
| MS.gene052503 | MS.gene25856 | 0.86605 | 3.78E-65 | -1.69E-46 |
| MS.gene052505 | MS.gene25856 | 0.847931 | 8.46E-60 | -1.69E-46 |
| MS.gene052506 | MS.gene25856 | 0.827122 | 1.86E-54 | -1.69E-46 |
| MS.gene052605 | MS.gene25856 | 0.800759 | 1.24E-48 | -1.69E-46 |
| MS.gene052615 | MS.gene25856 | 0.895864 | 6.39E-76 | -1.69E-46 |
| MS.gene052670 | MS.gene25856 | 0.839474 | 1.55E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene25856 | 0.831473 | 1.64E-55 | -1.69E-46 |
| MS.gene052823 | MS.gene25856 | 0.857308 | 1.78E-62 | -1.69E-46 |
| MS.gene052825 | MS.gene25856 | 0.854878 | 9.18E-62 | -1.69E-46 |
| MS.gene052870 | MS.gene25856 | 0.834862 | 2.34E-56 | -1.69E-46 |
| MS.gene052872 | MS.gene25856 | 0.840038 | 1.11E-57 | -1.69E-46 |
| MS.gene052916 | MS.gene25856 | 0.856268 | 3.61E-62 | -1.69E-46 |
| MS.gene052966 | MS.gene25856 | 0.818499 | 1.90E-52 | -1.69E-46 |
| MS.gene052982 | MS.gene25856 | 0.839413 | 1.61E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene25856 | 0.84833 | 6.56E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene25856 | 0.887278 | 1.64E-72 | -1.69E-46 |
| MS.gene053104 | MS.gene25856 | 0.898887 | 3.41E-77 | -1.69E-46 |
| MS.gene053107 | MS.gene25856 | 0.836292 | 1.02E-56 | -1.69E-46 |
| MS.gene053117 | MS.gene25856 | 0.805471 | 1.31E-49 | -1.69E-46 |
| MS.gene053203 | MS.gene25856 | 0.849166 | 3.85E-60 | -1.69E-46 |
| MS.gene053207 | MS.gene25856 | 0.911917 | 3.53E-83 | -1.69E-46 |
| MS.gene053209 | MS.gene25856 | 0.819201 | 1.32E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene25856 | 0.930312 | 1.97E-93 | -1.69E-46 |
| MS.gene053286 | MS.gene25856 | 0.925546 | 1.59E-90 | -1.69E-46 |
| MS.gene053322 | MS.gene25856 | 0.900538 | 6.63E-78 | -1.69E-46 |
| MS.gene053436 | MS.gene25856 | 0.875842 | 2.24E-68 | -1.69E-46 |
| MS.gene053479 | MS.gene25856 | 0.804252 | 2.36E-49 | -1.69E-46 |
| MS.gene053480 | MS.gene25856 | 0.830464 | 2.89E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene25856 | 0.888599 | 5.12E-73 | -1.69E-46 |
| MS.gene053579 | MS.gene25856 | 0.841644 | 4.19E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene25856 | 0.822494 | 2.30E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene25856 | 0.91063 | 1.51E-82 | -1.69E-46 |
| MS.gene053824 | MS.gene25856 | 0.845771 | 3.30E-59 | -1.69E-46 |
| MS.gene053915 | MS.gene25856 | 0.846755 | 1.78E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene25856 | 0.87187 | 4.92E-67 | -1.69E-46 |
| MS.gene054003 | MS.gene25856 | 0.800548 | 1.37E-48 | -1.69E-46 |
| MS.gene054376 | MS.gene25856 | 0.837602 | 4.72E-57 | -1.69E-46 |
| MS.gene054408 | MS.gene25856 | 0.878777 | 2.13E-69 | -1.69E-46 |
| MS.gene054595 | MS.gene25856 | 0.863989 | 1.68E-64 | -1.69E-46 |
| MS.gene054600 | MS.gene25856 | 0.911947 | 3.41E-83 | -1.69E-46 |
| MS.gene054642 | MS.gene25856 | 0.921707 | 2.53E-88 | -1.69E-46 |
| MS.gene05470 | MS.gene25856 | 0.840128 | 1.05E-57 | -1.69E-46 |
| MS.gene054802 | MS.gene25856 | 0.850937 | 1.23E-60 | -1.69E-46 |
| MS.gene054803 | MS.gene25856 | 0.846553 | 2.02E-59 | -1.69E-46 |
| MS.gene054804 | MS.gene25856 | 0.850749 | 1.39E-60 | -1.69E-46 |
| MS.gene054927 | MS.gene25856 | 0.858735 | 6.72E-63 | -1.69E-46 |
| MS.gene054954 | MS.gene25856 | 0.871036 | 9.28E-67 | -1.69E-46 |
| MS.gene05505 | MS.gene25856 | 0.89235 | 1.72E-74 | -1.69E-46 |
| MS.gene055154 | MS.gene25856 | -0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene25856 | 0.884076 | 2.61E-71 | -1.69E-46 |
| MS.gene055212 | MS.gene25856 | 0.873091 | 1.92E-67 | -1.69E-46 |
| MS.gene055224 | MS.gene25856 | 0.836567 | 8.67E-57 | -1.69E-46 |
| MS.gene055254 | MS.gene25856 | 0.82232 | 2.52E-53 | -1.69E-46 |
| MS.gene055289 | MS.gene25856 | 0.88679 | 2.52E-72 | -1.69E-46 |
| MS.gene055362 | MS.gene25856 | 0.913305 | 7.18E-84 | -1.69E-46 |
| MS.gene055397 | MS.gene25856 | 0.860345 | 2.20E-63 | -1.69E-46 |
| MS.gene055412 | MS.gene25856 | 0.854198 | 1.44E-61 | -1.69E-46 |
| MS.gene055499 | MS.gene25856 | 0.88033 | 6.00E-70 | -1.69E-46 |
| MS.gene055502 | MS.gene25856 | 0.889076 | 3.35E-73 | -1.69E-46 |
| MS.gene055577 | MS.gene25856 | 0.861594 | 9.20E-64 | -1.69E-46 |
| MS.gene055636 | MS.gene25856 | 0.821723 | 3.47E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene25856 | 0.825753 | 3.95E-54 | -1.69E-46 |
| MS.gene055647 | MS.gene25856 | 0.851865 | 6.72E-61 | -1.69E-46 |
| MS.gene055722 | MS.gene25856 | 0.895464 | 9.35E-76 | -1.69E-46 |
| MS.gene055748 | MS.gene25856 | 0.844589 | 6.89E-59 | -1.69E-46 |
| MS.gene055750 | MS.gene25856 | 0.830825 | 2.36E-55 | -1.69E-46 |
| MS.gene055751 | MS.gene25856 | 0.828648 | 8.00E-55 | -1.69E-46 |
| MS.gene05589 | MS.gene25856 | 0.813052 | 3.11E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene25856 | 0.883456 | 4.42E-71 | -1.69E-46 |
| MS.gene055941 | MS.gene25856 | 0.87378 | 1.13E-67 | -1.69E-46 |
| MS.gene055956 | MS.gene25856 | -0.828548 | 8.46E-55 | -1.69E-46 |
| MS.gene056040 | MS.gene25856 | 0.802118 | 6.53E-49 | -1.69E-46 |
| MS.gene056083 | MS.gene25856 | 0.880315 | 6.07E-70 | -1.69E-46 |
| MS.gene056374 | MS.gene25856 | 0.900548 | 6.56E-78 | -1.69E-46 |
| MS.gene056409 | MS.gene25856 | 0.825033 | 5.84E-54 | -1.69E-46 |
| MS.gene056446 | MS.gene25856 | 0.823416 | 1.40E-53 | -1.69E-46 |
| MS.gene056448 | MS.gene25856 | 0.83293 | 7.13E-56 | -1.69E-46 |
| MS.gene056449 | MS.gene25856 | 0.836789 | 7.62E-57 | -1.69E-46 |
| MS.gene056487 | MS.gene25856 | 0.843965 | 1.01E-58 | -1.69E-46 |
| MS.gene056504 | MS.gene25856 | 0.850439 | 1.70E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene25856 | 0.853202 | 2.79E-61 | -1.69E-46 |
| MS.gene056511 | MS.gene25856 | 0.816008 | 6.90E-52 | -1.69E-46 |
| MS.gene056549 | MS.gene25856 | 0.802406 | 5.70E-49 | -1.69E-46 |
| MS.gene056609 | MS.gene25856 | 0.805088 | 1.58E-49 | -1.69E-46 |
| MS.gene056610 | MS.gene25856 | 0.837971 | 3.79E-57 | -1.69E-46 |
| MS.gene056657 | MS.gene25856 | 0.913479 | 5.87E-84 | -1.69E-46 |
| MS.gene056692 | MS.gene25856 | 0.859522 | 3.90E-63 | -1.69E-46 |
| MS.gene056897 | MS.gene25856 | 0.827053 | 1.93E-54 | -1.69E-46 |
| MS.gene056898 | MS.gene25856 | 0.809608 | 1.74E-50 | -1.69E-46 |
| MS.gene056942 | MS.gene25856 | 0.801569 | 8.46E-49 | -1.69E-46 |
| MS.gene056946 | MS.gene25856 | 0.813976 | 1.95E-51 | -1.69E-46 |
| MS.gene057011 | MS.gene25856 | 0.882458 | 1.02E-70 | -1.69E-46 |
| MS.gene057048 | MS.gene25856 | 0.830164 | 3.43E-55 | -1.69E-46 |
| MS.gene057076 | MS.gene25856 | 0.845779 | 3.28E-59 | -1.69E-46 |
| MS.gene057123 | MS.gene25856 | 0.812986 | 3.22E-51 | -1.69E-46 |
| MS.gene057124 | MS.gene25856 | 0.802175 | 6.36E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene25856 | 0.908707 | 1.27E-81 | -1.69E-46 |
| MS.gene057146 | MS.gene25856 | 0.862969 | 3.48E-64 | -1.69E-46 |
| MS.gene057196 | MS.gene25856 | 0.838832 | 2.27E-57 | -1.69E-46 |
| MS.gene057246 | MS.gene25856 | 0.814778 | 1.30E-51 | -1.69E-46 |
| MS.gene057331 | MS.gene25856 | 0.871721 | 5.51E-67 | -1.69E-46 |
| MS.gene05735 | MS.gene25856 | 0.805481 | 1.31E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene25856 | 0.923433 | 2.67E-89 | -1.69E-46 |
| MS.gene057658 | MS.gene25856 | 0.874791 | 5.12E-68 | -1.69E-46 |
| MS.gene057734 | MS.gene25856 | 0.810063 | 1.39E-50 | -1.69E-46 |
| MS.gene057831 | MS.gene25856 | 0.862368 | 5.32E-64 | -1.69E-46 |
| MS.gene057856 | MS.gene25856 | 0.803086 | 4.12E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene25856 | 0.812994 | 3.20E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene25856 | 0.82779 | 1.29E-54 | -1.69E-46 |
| MS.gene058006 | MS.gene25856 | 0.821489 | 3.93E-53 | -1.69E-46 |
| MS.gene058019 | MS.gene25856 | 0.873031 | 2.01E-67 | -1.69E-46 |
| MS.gene058130 | MS.gene25856 | 0.856859 | 2.42E-62 | -1.69E-46 |
| MS.gene058233 | MS.gene25856 | 0.804113 | 2.52E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene25856 | 0.831283 | 1.82E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene25856 | 0.876139 | 1.77E-68 | -1.69E-46 |
| MS.gene058338 | MS.gene25856 | 0.834738 | 2.52E-56 | -1.69E-46 |
| MS.gene05837 | MS.gene25856 | 0.844607 | 6.81E-59 | -1.69E-46 |
| MS.gene058419 | MS.gene25856 | 0.921187 | 4.93E-88 | -1.69E-46 |
| MS.gene058544 | MS.gene25856 | 0.903263 | 4.16E-79 | -1.69E-46 |
| MS.gene058660 | MS.gene25856 | 0.816111 | 6.55E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene25856 | 0.867273 | 1.55E-65 | -1.69E-46 |
| MS.gene058773 | MS.gene25856 | 0.889658 | 1.99E-73 | -1.69E-46 |
| MS.gene058838 | MS.gene25856 | 0.866401 | 2.93E-65 | -1.69E-46 |
| MS.gene05883 | MS.gene25856 | 0.846038 | 2.79E-59 | -1.69E-46 |
| MS.gene059022 | MS.gene25856 | 0.889401 | 2.50E-73 | -1.69E-46 |
| MS.gene059023 | MS.gene25856 | 0.864987 | 8.19E-65 | -1.69E-46 |
| MS.gene059029 | MS.gene25856 | 0.863463 | 2.44E-64 | -1.69E-46 |
| MS.gene05913 | MS.gene25856 | 0.84068 | 7.51E-58 | -1.69E-46 |
| MS.gene05914 | MS.gene25856 | 0.80079 | 1.22E-48 | -1.69E-46 |
| MS.gene05934 | MS.gene25856 | 0.871199 | 8.20E-67 | -1.69E-46 |
| MS.gene059367 | MS.gene25856 | 0.822518 | 2.27E-53 | -1.69E-46 |
| MS.gene059368 | MS.gene25856 | 0.800299 | 1.54E-48 | -1.69E-46 |
| MS.gene059455 | MS.gene25856 | 0.807083 | 6.01E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene25856 | 0.869763 | 2.43E-66 | -1.69E-46 |
| MS.gene059667 | MS.gene25856 | 0.815072 | 1.11E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene25856 | 0.905186 | 5.60E-80 | -1.69E-46 |
| MS.gene059688 | MS.gene25856 | 0.82685 | 2.16E-54 | -1.69E-46 |
| MS.gene059692 | MS.gene25856 | 0.818936 | 1.51E-52 | -1.69E-46 |
| MS.gene059695 | MS.gene25856 | 0.823189 | 1.58E-53 | -1.69E-46 |
| MS.gene059711 | MS.gene25856 | 0.81366 | 2.29E-51 | -1.69E-46 |
| MS.gene059718 | MS.gene25856 | 0.920143 | 1.86E-87 | -1.69E-46 |
| MS.gene059756 | MS.gene25856 | 0.85083 | 1.32E-60 | -1.69E-46 |
| MS.gene059801 | MS.gene25856 | 0.842793 | 2.08E-58 | -1.69E-46 |
| MS.gene059858 | MS.gene25856 | 0.802809 | 4.70E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene25856 | 0.833213 | 6.07E-56 | -1.69E-46 |
| MS.gene059902 | MS.gene25856 | 0.869721 | 2.50E-66 | -1.69E-46 |
| MS.gene059960 | MS.gene25856 | 0.893033 | 9.15E-75 | -1.69E-46 |
| MS.gene060193 | MS.gene25856 | 0.817711 | 2.86E-52 | -1.69E-46 |
| MS.gene060356 | MS.gene25856 | 0.805501 | 1.29E-49 | -1.69E-46 |
| MS.gene060403 | MS.gene25856 | 0.805709 | 1.17E-49 | -1.69E-46 |
| MS.gene060482 | MS.gene25856 | 0.847124 | 1.41E-59 | -1.69E-46 |
| MS.gene060703 | MS.gene25856 | 0.819791 | 9.65E-53 | -1.69E-46 |
| MS.gene060728 | MS.gene25856 | 0.821079 | 4.89E-53 | -1.69E-46 |
| MS.gene060762 | MS.gene25856 | 0.871101 | 8.83E-67 | -1.69E-46 |
| MS.gene06077 | MS.gene25856 | 0.869469 | 3.03E-66 | -1.69E-46 |
| MS.gene060804 | MS.gene25856 | 0.890892 | 6.53E-74 | -1.69E-46 |
| MS.gene060818 | MS.gene25856 | 0.843423 | 1.41E-58 | -1.69E-46 |
| MS.gene060835 | MS.gene25856 | 0.849192 | 3.79E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene25856 | 0.835916 | 1.27E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene25856 | 0.911435 | 6.10E-83 | -1.69E-46 |
| MS.gene060982 | MS.gene25856 | 0.811981 | 5.33E-51 | -1.69E-46 |
| MS.gene061041 | MS.gene25856 | 0.869617 | 2.71E-66 | -1.69E-46 |
| MS.gene061134 | MS.gene25856 | 0.823212 | 1.56E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene25856 | 0.914463 | 1.86E-84 | -1.69E-46 |
| MS.gene061171 | MS.gene25856 | 0.831718 | 1.42E-55 | -1.69E-46 |
| MS.gene061200 | MS.gene25856 | 0.890155 | 1.27E-73 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25856.t1 | MTR_3g079520 | 94.009 | 217 | 13 | 0 | 1 | 217 | 1 | 217 | 8.36e-147 | 408 |
| MS.gene25856.t1 | MTR_3g479600 | 94.009 | 217 | 13 | 0 | 1 | 217 | 1 | 217 | 8.36e-147 | 408 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25856.t1 | AT2G21530 | 59.231 | 130 | 52 | 1 | 82 | 211 | 81 | 209 | 9.38e-51 | 164 |
Find 40 sgRNAs with CRISPR-Local
Find 79 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCTTCTTGTTATAGATT+TGG | 0.263843 | 3.2:-69956417 | MS.gene25856:CDS |
| TCTGGGAGTTATATTACTTT+TGG | 0.301923 | 3.2:-69956329 | MS.gene25856:intron |
| AATGCCAGGGGACACTAATT+TGG | 0.313943 | 3.2:-69956102 | MS.gene25856:intron |
| ACTTCTATACCTGTTGCAAC+TGG | 0.344018 | 3.2:+69956634 | None:intergenic |
| CCATTGTCTAGTTCACCTTC+TGG | 0.345009 | 3.2:+69956026 | None:intergenic |
| GCAGAACATGTTTGAGACTT+TGG | 0.358567 | 3.2:+69957310 | None:intergenic |
| GTAGTTACCACTGTATCTTC+TGG | 0.366490 | 3.2:-69956347 | MS.gene25856:CDS |
| CTTTGTGTAGCATTAGTTGT+TGG | 0.401469 | 3.2:+69957112 | None:intergenic |
| GCATTGGAGTGTAATAAAAT+TGG | 0.429187 | 3.2:+69957271 | None:intergenic |
| ATCACTAAATCAGCTTTCTC+TGG | 0.443107 | 3.2:+69956658 | None:intergenic |
| TTGATGCATGTATAGCTCCT+AGG | 0.449624 | 3.2:+69957146 | None:intergenic |
| TTAGTGATCCCAGTTGCAAC+AGG | 0.462387 | 3.2:-69956643 | MS.gene25856:intron |
| TTCAAGGCATATAGGCTTCA+AGG | 0.462486 | 3.2:-69956813 | MS.gene25856:CDS |
| GATGGTGATTCAAGGCATAT+AGG | 0.467110 | 3.2:-69956821 | MS.gene25856:CDS |
| AGCACCAATGGAACATTCAT+TGG | 0.469041 | 3.2:-69956392 | MS.gene25856:CDS |
| GAACATTCATTGGTGACAAA+AGG | 0.471831 | 3.2:-69956382 | MS.gene25856:CDS |
| TAGTTACCACTGTATCTTCT+GGG | 0.476442 | 3.2:-69956346 | MS.gene25856:CDS |
| CAACTAATGCTACACAAAGA+TGG | 0.490326 | 3.2:-69957108 | MS.gene25856:CDS |
| TGATAGGAGATGGTGATTCA+AGG | 0.491582 | 3.2:-69956829 | MS.gene25856:intron |
| GAAAGTTACTGAAGTGGCAT+TGG | 0.511446 | 3.2:+69957255 | None:intergenic |
| GTCACCAATGAATGTTCCAT+TGG | 0.522297 | 3.2:+69956388 | None:intergenic |
| GAGAAGGCTGCAGATACAGT+TGG | 0.528528 | 3.2:-69956053 | MS.gene25856:CDS |
| GGTGACAAAAGGCTGAAACC+TGG | 0.545814 | 3.2:-69956371 | MS.gene25856:CDS |
| AGATGGATTCTTGAACCAGT+TGG | 0.550406 | 3.2:-69957091 | MS.gene25856:intron |
| ATAGATTTGGATAGCACCAA+TGG | 0.560750 | 3.2:-69956404 | MS.gene25856:CDS |
| GGCTTCAAGGTTGAGAGACC+AGG | 0.565164 | 3.2:-69956800 | MS.gene25856:CDS |
| GATACAGTGGTAACTACTCC+AGG | 0.567838 | 3.2:+69956353 | None:intergenic |
| TGTTATACATCCCAAATCAC+AGG | 0.568456 | 3.2:-69957179 | MS.gene25856:CDS |
| CTTCTATACCTGTTGCAACT+GGG | 0.577256 | 3.2:+69956635 | None:intergenic |
| CAGGTGTGCATGCACGCATT+CGG | 0.581165 | 3.2:-69956451 | MS.gene25856:CDS |
| TGTGTCGAAAATAGAAGAGA+AGG | 0.593642 | 3.2:-69956069 | MS.gene25856:CDS |
| TGTAGCATTAGTTGTTGGAG+TGG | 0.594055 | 3.2:+69957117 | None:intergenic |
| ACTCTAGCAACAATAATGGA+AGG | 0.614859 | 3.2:-69957364 | None:intergenic |
| ATCTAGAATGAAGTCACTGT+AGG | 0.636581 | 3.2:-69956688 | MS.gene25856:intron |
| TGAACTGAAAGTTACTGAAG+TGG | 0.650521 | 3.2:+69957249 | None:intergenic |
| GATACAGTTGGAGAACCAGA+AGG | 0.670779 | 3.2:-69956041 | MS.gene25856:CDS |
| GAAGTAATTTCATAAGCACC+TGG | 0.674584 | 3.2:+69956782 | None:intergenic |
| TTGGGATGTATAACACGACC+TGG | 0.687791 | 3.2:+69957187 | None:intergenic |
| ATAACTCCCAGAAGATACAG+TGG | 0.690459 | 3.2:+69956340 | None:intergenic |
| CCAGAAGGTGAACTAGACAA+TGG | 0.701962 | 3.2:-69956026 | MS.gene25856:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTAAGTATTTGTTTCAATA+TGG | - | chr3.2:69956431-69956450 | MS.gene25856:CDS | 15.0% |
| !!! | GATTTTAACAATTTTTCAAT+TGG | + | chr3.2:69956302-69956321 | None:intergenic | 15.0% |
| !! | ACATAATTATTCAACAGAAA+AGG | + | chr3.2:69957066-69957085 | None:intergenic | 20.0% |
| !! | TATTTGTAGTAATATCATGA+AGG | + | chr3.2:69956389-69956408 | None:intergenic | 20.0% |
| !! | TGAAACAAATACTTAAAAAG+TGG | + | chr3.2:69956428-69956447 | None:intergenic | 20.0% |
| !! | TTCATGATATTACTACAAAT+AGG | - | chr3.2:69956388-69956407 | MS.gene25856:CDS | 20.0% |
| !! | TTTGTAACTGTAAGAAAAAT+AGG | + | chr3.2:69956755-69956774 | None:intergenic | 20.0% |
| !!! | TATCATTTTGAAATTCTCTT+AGG | + | chr3.2:69957158-69957177 | None:intergenic | 20.0% |
| ! | ACTTAAAAAGTGGTTAATTG+AGG | + | chr3.2:69956418-69956437 | None:intergenic | 25.0% |
| ! | AGCATAGTACATTAAGATTA+AGG | + | chr3.2:69956801-69956820 | None:intergenic | 25.0% |
| ! | ATAATAGCAGAGGTTAAATA+TGG | + | chr3.2:69957209-69957228 | None:intergenic | 25.0% |
| ! | CAAATTATATTGTGATTCTC+TGG | + | chr3.2:69956835-69956854 | None:intergenic | 25.0% |
| ! | CAATATGGTCAATATTAACA+AGG | - | chr3.2:69956446-69956465 | MS.gene25856:CDS | 25.0% |
| ! | CTCAATCAAGATAAGAAAAA+TGG | + | chr3.2:69956348-69956367 | None:intergenic | 25.0% |
| ! | CTTAAAAAGTGGTTAATTGA+GGG | + | chr3.2:69956417-69956436 | None:intergenic | 25.0% |
| ! | TTGAAATTCTCTTAGGAATA+TGG | + | chr3.2:69957151-69957170 | None:intergenic | 25.0% |
| !! | CAATCTTCTTGTTATAGATT+TGG | - | chr3.2:69956915-69956934 | MS.gene25856:intron | 25.0% |
| !!! | ACAAAACCAATCATTTTGAT+AGG | - | chr3.2:69956487-69956506 | MS.gene25856:intron | 25.0% |
| CAGAGGTTAAATATGGAATA+GGG | + | chr3.2:69957202-69957221 | None:intergenic | 30.0% | |
| GCATTGGAGTGTAATAAAAT+TGG | + | chr3.2:69956064-69956083 | None:intergenic | 30.0% | |
| TATATAACCCTGTTTGTAGA+AGG | - | chr3.2:69957112-69957131 | MS.gene25856:CDS | 30.0% | |
| TTAAGATCCTTCTACAAACA+GGG | + | chr3.2:69957122-69957141 | None:intergenic | 30.0% | |
| ! | ATCAGAATCAATGATTTGTG+TGG | - | chr3.2:69956583-69956602 | MS.gene25856:intron | 30.0% |
| ! | TCTGGGAGTTATATTACTTT+TGG | - | chr3.2:69957003-69957022 | MS.gene25856:intron | 30.0% |
| ! | TGTTTTGTATTTACAGTGTC+AGG | - | chr3.2:69956862-69956881 | MS.gene25856:intron | 30.0% |
| ! | TTTAAGATCCTTCTACAAAC+AGG | + | chr3.2:69957123-69957142 | None:intergenic | 30.0% |
| !! | AACAAGGTGTTTTATCACTT+TGG | - | chr3.2:69956462-69956481 | MS.gene25856:intron | 30.0% |
| !!! | GAGACTTTGGAATTTTTGTT+AGG | + | chr3.2:69956012-69956031 | None:intergenic | 30.0% |
| !!! | TTCACTTTTTCCTGTGATTT+GGG | + | chr3.2:69956166-69956185 | None:intergenic | 30.0% |
| ATAGATTTGGATAGCACCAA+TGG | - | chr3.2:69956928-69956947 | MS.gene25856:intron | 35.0% | |
| ATCACTAAATCAGCTTTCTC+TGG | + | chr3.2:69956677-69956696 | None:intergenic | 35.0% | |
| CAACTAATGCTACACAAAGA+TGG | - | chr3.2:69956224-69956243 | MS.gene25856:intron | 35.0% | |
| CCATCTCCTATCAAAATGAT+TGG | + | chr3.2:69956496-69956515 | None:intergenic | 35.0% | |
| CTTTGTGTAGCATTAGTTGT+TGG | + | chr3.2:69956223-69956242 | None:intergenic | 35.0% | |
| GAAGTAATTTCATAAGCACC+TGG | + | chr3.2:69956553-69956572 | None:intergenic | 35.0% | |
| GATTAAGGAGCTTATTTCAG+TGG | + | chr3.2:69956786-69956805 | None:intergenic | 35.0% | |
| GCAGAGGTTAAATATGGAAT+AGG | + | chr3.2:69957203-69957222 | None:intergenic | 35.0% | |
| TAGTTACCACTGTATCTTCT+GGG | - | chr3.2:69956986-69957005 | MS.gene25856:intron | 35.0% | |
| TGAACTGAAAGTTACTGAAG+TGG | + | chr3.2:69956086-69956105 | None:intergenic | 35.0% | |
| TGTGTCGAAAATAGAAGAGA+AGG | - | chr3.2:69957263-69957282 | MS.gene25856:CDS | 35.0% | |
| TGTTATACATCCCAAATCAC+AGG | - | chr3.2:69956153-69956172 | MS.gene25856:intron | 35.0% | |
| ! | AGAAAGTGTAACTAACCAAC+TGG | + | chr3.2:69956259-69956278 | None:intergenic | 35.0% |
| ! | ATCTAGAATGAAGTCACTGT+AGG | - | chr3.2:69956644-69956663 | MS.gene25856:CDS | 35.0% |
| ! | GAACATTCATTGGTGACAAA+AGG | - | chr3.2:69956950-69956969 | MS.gene25856:intron | 35.0% |
| ! | TCTCTTCTATTTTCGACACA+CGG | + | chr3.2:69957263-69957282 | None:intergenic | 35.0% |
| !! | CCAATCATTTTGATAGGAGA+TGG | - | chr3.2:69956493-69956512 | MS.gene25856:intron | 35.0% |
| !!! | GTTCACTTTTTCCTGTGATT+TGG | + | chr3.2:69956167-69956186 | None:intergenic | 35.0% |
| ACTTCTATACCTGTTGCAAC+TGG | + | chr3.2:69956701-69956720 | None:intergenic | 40.0% | |
| AGCACCAATGGAACATTCAT+TGG | - | chr3.2:69956940-69956959 | MS.gene25856:intron | 40.0% | |
| ATAACTCCCAGAAGATACAG+TGG | + | chr3.2:69956995-69957014 | None:intergenic | 40.0% | |
| CTCTGCTATTATGAATGCCA+GGG | - | chr3.2:69957217-69957236 | MS.gene25856:CDS | 40.0% | |
| CTTCTATACCTGTTGCAACT+GGG | + | chr3.2:69956700-69956719 | None:intergenic | 40.0% | |
| GAAAGTTACTGAAGTGGCAT+TGG | + | chr3.2:69956080-69956099 | None:intergenic | 40.0% | |
| GATGGTGATTCAAGGCATAT+AGG | - | chr3.2:69956511-69956530 | MS.gene25856:intron | 40.0% | |
| GTAGTTACCACTGTATCTTC+TGG | - | chr3.2:69956985-69957004 | MS.gene25856:intron | 40.0% | |
| GTCACCAATGAATGTTCCAT+TGG | + | chr3.2:69956947-69956966 | None:intergenic | 40.0% | |
| TCACAGGAAAAAGTGAACCT+AGG | - | chr3.2:69956169-69956188 | MS.gene25856:intron | 40.0% | |
| TCTGCTATTATGAATGCCAG+GGG | - | chr3.2:69957218-69957237 | MS.gene25856:CDS | 40.0% | |
| TGATAGGAGATGGTGATTCA+AGG | - | chr3.2:69956503-69956522 | MS.gene25856:intron | 40.0% | |
| TGTAGCATTAGTTGTTGGAG+TGG | + | chr3.2:69956218-69956237 | None:intergenic | 40.0% | |
| TTCAAGGCATATAGGCTTCA+AGG | - | chr3.2:69956519-69956538 | MS.gene25856:intron | 40.0% | |
| TTGATGCATGTATAGCTCCT+AGG | + | chr3.2:69956189-69956208 | None:intergenic | 40.0% | |
| ! | AGATGGATTCTTGAACCAGT+TGG | - | chr3.2:69956241-69956260 | MS.gene25856:intron | 40.0% |
| ! | GCAGAACATGTTTGAGACTT+TGG | + | chr3.2:69956025-69956044 | None:intergenic | 40.0% |
| !!! | TGCTTTCTTTTTCAGCAACC+AGG | - | chr3.2:69956127-69956146 | MS.gene25856:intron | 40.0% |
| AATGCCAGGGGACACTAATT+TGG | - | chr3.2:69957230-69957249 | MS.gene25856:CDS | 45.0% | |
| ATAGCCAAATTAGTGTCCCC+TGG | + | chr3.2:69957237-69957256 | None:intergenic | 45.0% | |
| CCAGAAGGTGAACTAGACAA+TGG | - | chr3.2:69957306-69957325 | MS.gene25856:CDS | 45.0% | |
| CCTCTGCTATTATGAATGCC+AGG | - | chr3.2:69957216-69957235 | MS.gene25856:CDS | 45.0% | |
| CCTGGCATTCATAATAGCAG+AGG | + | chr3.2:69957219-69957238 | None:intergenic | 45.0% | |
| GATACAGTGGTAACTACTCC+AGG | + | chr3.2:69956982-69957001 | None:intergenic | 45.0% | |
| GATACAGTTGGAGAACCAGA+AGG | - | chr3.2:69957291-69957310 | MS.gene25856:CDS | 45.0% | |
| TTAGTGATCCCAGTTGCAAC+AGG | - | chr3.2:69956689-69956708 | MS.gene25856:intron | 45.0% | |
| TTGGGATGTATAACACGACC+TGG | + | chr3.2:69956148-69956167 | None:intergenic | 45.0% | |
| ! | CCATTGTCTAGTTCACCTTC+TGG | + | chr3.2:69957309-69957328 | None:intergenic | 45.0% |
| GAGAAGGCTGCAGATACAGT+TGG | - | chr3.2:69957279-69957298 | MS.gene25856:CDS | 50.0% | |
| GGTGACAAAAGGCTGAAACC+TGG | - | chr3.2:69956961-69956980 | MS.gene25856:intron | 50.0% | |
| CAGGTGTGCATGCACGCATT+CGG | - | chr3.2:69956881-69956900 | MS.gene25856:intron | 55.0% | |
| GGCTTCAAGGTTGAGAGACC+AGG | - | chr3.2:69956532-69956551 | MS.gene25856:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.2 | gene | 69955983 | 69957371 | 69955983 | ID=MS.gene25856 |
| chr3.2 | mRNA | 69955983 | 69957371 | 69955983 | ID=MS.gene25856.t1;Parent=MS.gene25856 |
| chr3.2 | exon | 69957092 | 69957371 | 69957092 | ID=MS.gene25856.t1.exon1;Parent=MS.gene25856.t1 |
| chr3.2 | CDS | 69957092 | 69957371 | 69957092 | ID=cds.MS.gene25856.t1;Parent=MS.gene25856.t1 |
| chr3.2 | exon | 69956781 | 69956845 | 69956781 | ID=MS.gene25856.t1.exon2;Parent=MS.gene25856.t1 |
| chr3.2 | CDS | 69956781 | 69956845 | 69956781 | ID=cds.MS.gene25856.t1;Parent=MS.gene25856.t1 |
| chr3.2 | exon | 69956644 | 69956704 | 69956644 | ID=MS.gene25856.t1.exon3;Parent=MS.gene25856.t1 |
| chr3.2 | CDS | 69956644 | 69956704 | 69956644 | ID=cds.MS.gene25856.t1;Parent=MS.gene25856.t1 |
| chr3.2 | exon | 69956330 | 69956476 | 69956330 | ID=MS.gene25856.t1.exon4;Parent=MS.gene25856.t1 |
| chr3.2 | CDS | 69956330 | 69956476 | 69956330 | ID=cds.MS.gene25856.t1;Parent=MS.gene25856.t1 |
| chr3.2 | exon | 69955983 | 69956116 | 69955983 | ID=MS.gene25856.t1.exon5;Parent=MS.gene25856.t1 |
| chr3.2 | CDS | 69955983 | 69956116 | 69955983 | ID=cds.MS.gene25856.t1;Parent=MS.gene25856.t1 |
| Gene Sequence |
| Protein sequence |
