Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269060 | RDY14692.1 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 7.75e-56 | 178 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269060 | sp|Q49L15|PSBK_EUCGG | 91.667 | 60 | 5 | 0 | 1 | 60 | 1 | 60 | 1.80e-32 | 110 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269060 | A0A371II05 | 90.722 | 97 | 9 | 0 | 1 | 97 | 4 | 100 | 3.70e-56 | 178 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017120 | Msa0269060 | 0.801371 | 9.292374e-49 | -8.615850e-47 |
| Msa0028610 | Msa0269060 | 0.807524 | 4.846538e-50 | -8.615850e-47 |
| Msa0032040 | Msa0269060 | 0.803980 | 2.690904e-49 | -8.615850e-47 |
| Msa0035090 | Msa0269060 | 0.848140 | 7.409876e-60 | -8.615850e-47 |
| Msa0039200 | Msa0269060 | 0.825931 | 3.581555e-54 | -8.615850e-47 |
| Msa0040190 | Msa0269060 | 0.830290 | 3.192185e-55 | -8.615850e-47 |
| Msa0050360 | Msa0269060 | 0.807617 | 4.632054e-50 | -8.615850e-47 |
| Msa0050400 | Msa0269060 | 0.811331 | 7.386057e-51 | -8.615850e-47 |
| Msa0057260 | Msa0269060 | 0.802558 | 5.298718e-49 | -8.615850e-47 |
| Msa0057740 | Msa0269060 | 0.817265 | 3.606955e-52 | -8.615850e-47 |
| Msa0065390 | Msa0269060 | 0.805983 | 1.025794e-49 | -8.615850e-47 |
| Msa0083570 | Msa0269060 | 0.821902 | 3.153587e-53 | -8.615850e-47 |
| Msa0086820 | Msa0269060 | 0.827316 | 1.673373e-54 | -8.615850e-47 |
| Msa0087880 | Msa0269060 | 0.821976 | 3.032480e-53 | -8.615850e-47 |
| Msa0092750 | Msa0269060 | 0.851048 | 1.143487e-60 | -8.615850e-47 |
| Msa0094420 | Msa0269060 | 0.810941 | 8.973284e-51 | -8.615850e-47 |
| Msa0095140 | Msa0269060 | 0.879333 | 1.358019e-69 | -8.615850e-47 |
| Msa0095180 | Msa0269060 | 0.824811 | 6.593800e-54 | -8.615850e-47 |
| Msa0095190 | Msa0269060 | 0.800885 | 1.168183e-48 | -8.615850e-47 |
| Msa0095200 | Msa0269060 | 0.878924 | 1.893690e-69 | -8.615850e-47 |
| Msa0095240 | Msa0269060 | 0.846133 | 2.629666e-59 | -8.615850e-47 |
| Msa0095270 | Msa0269060 | 0.880521 | 5.126063e-70 | -8.615850e-47 |
| Msa0095300 | Msa0269060 | 0.812028 | 5.209754e-51 | -8.615850e-47 |
| Msa0099830 | Msa0269060 | 0.817896 | 2.600223e-52 | -8.615850e-47 |
| Msa0103060 | Msa0269060 | 0.827290 | 1.697692e-54 | -8.615850e-47 |
| Msa0103780 | Msa0269060 | 0.810878 | 9.258189e-51 | -8.615850e-47 |
| Msa0110710 | Msa0269060 | 0.810015 | 1.421848e-50 | -8.615850e-47 |
| Msa0123940 | Msa0269060 | 0.809411 | 1.917160e-50 | -8.615850e-47 |
| Msa0124070 | Msa0269060 | 0.810900 | 9.159674e-51 | -8.615850e-47 |
| Msa0130120 | Msa0269060 | 0.840315 | 9.363514e-58 | -8.615850e-47 |
| Msa0133670 | Msa0269060 | 0.828062 | 1.107754e-54 | -8.615850e-47 |
| Msa0133880 | Msa0269060 | 0.832556 | 8.837046e-56 | -8.615850e-47 |
| Msa0134550 | Msa0269060 | 0.832590 | 8.665458e-56 | -8.615850e-47 |
| Msa0139740 | Msa0269060 | 0.831579 | 1.541384e-55 | -8.615850e-47 |
| Msa0141670 | Msa0269060 | 0.822468 | 2.330745e-53 | -8.615850e-47 |
| Msa0149070 | Msa0269060 | 0.813160 | 2.945190e-51 | -8.615850e-47 |
| Msa0156780 | Msa0269060 | 0.831213 | 1.896429e-55 | -8.615850e-47 |
| Msa0157020 | Msa0269060 | 0.805834 | 1.102418e-49 | -8.615850e-47 |
| Msa0175900 | Msa0269060 | 0.849371 | 3.374930e-60 | -8.615850e-47 |
| Msa0180980 | Msa0269060 | 0.821242 | 4.481127e-53 | -8.615850e-47 |
| Msa0184120 | Msa0269060 | 0.829989 | 3.780721e-55 | -8.615850e-47 |
| Msa0186750 | Msa0269060 | 0.815595 | 8.528247e-52 | -8.615850e-47 |
| Msa0189050 | Msa0269060 | 0.802992 | 4.310920e-49 | -8.615850e-47 |
| Msa0190000 | Msa0269060 | 0.829995 | 3.767502e-55 | -8.615850e-47 |
| Msa0202630 | Msa0269060 | 0.802394 | 5.729353e-49 | -8.615850e-47 |
| Msa0216010 | Msa0269060 | 0.800486 | 1.408860e-48 | -8.615850e-47 |
| Msa0221860 | Msa0269060 | 0.856718 | 2.661389e-62 | -8.615850e-47 |
| Msa0222070 | Msa0269060 | 0.829699 | 4.446546e-55 | -8.615850e-47 |
| Msa0222120 | Msa0269060 | 0.826465 | 2.672154e-54 | -8.615850e-47 |
| Msa0224960 | Msa0269060 | 0.823961 | 1.044895e-53 | -8.615850e-47 |
| Msa0225010 | Msa0269060 | 0.822694 | 2.064866e-53 | -8.615850e-47 |
| Msa0227290 | Msa0269060 | 0.825731 | 3.995216e-54 | -8.615850e-47 |
| Msa0231310 | Msa0269060 | 0.805228 | 1.477074e-49 | -8.615850e-47 |
| Msa0240290 | Msa0269060 | 0.805020 | 1.632603e-49 | -8.615850e-47 |
| Msa0253410 | Msa0269060 | 0.826528 | 2.582444e-54 | -8.615850e-47 |
| Msa0257130 | Msa0269060 | 0.804190 | 2.432656e-49 | -8.615850e-47 |
| Msa0263620 | Msa0269060 | 0.826810 | 2.211537e-54 | -8.615850e-47 |
| Msa0268180 | Msa0269060 | 0.956741 | 1.439645e-114 | -8.615850e-47 |
| Msa0268220 | Msa0269060 | 0.850298 | 1.858397e-60 | -8.615850e-47 |
| Msa0268340 | Msa0269060 | 0.862524 | 4.768488e-64 | -8.615850e-47 |
| Msa0268380 | Msa0269060 | 0.912500 | 1.813519e-83 | -8.615850e-47 |
| Msa0268420 | Msa0269060 | 0.949260 | 1.821806e-107 | -8.615850e-47 |
| Msa0268460 | Msa0269060 | 0.866607 | 2.520553e-65 | -8.615850e-47 |
| Msa0268500 | Msa0269060 | 0.863684 | 2.087867e-64 | -8.615850e-47 |
| Msa0268540 | Msa0269060 | 0.926792 | 2.879599e-91 | -8.615850e-47 |
| Msa0268650 | Msa0269060 | 0.949968 | 4.329342e-108 | -8.615850e-47 |
| Msa0268680 | Msa0269060 | 0.823512 | 1.331350e-53 | -8.615850e-47 |
| Msa0268690 | Msa0269060 | 0.843876 | 1.070188e-58 | -8.615850e-47 |
| Msa0268730 | Msa0269060 | 0.908487 | 1.620071e-81 | -8.615850e-47 |
| Msa0268760 | Msa0269060 | 0.844321 | 8.128309e-59 | -8.615850e-47 |
| Msa0268850 | Msa0269060 | 0.954686 | 1.690375e-112 | -8.615850e-47 |
| Msa0268900 | Msa0269060 | 0.848307 | 6.663527e-60 | -8.615850e-47 |
| Msa0268930 | Msa0269060 | 0.905480 | 4.104066e-80 | -8.615850e-47 |
| Msa0269060 | Msa0269100 | 0.862663 | 4.321195e-64 | -8.615850e-47 |
| Msa0269060 | Msa0284260 | 0.802599 | 5.198137e-49 | -8.615850e-47 |
| Msa0269060 | Msa0295840 | 0.802544 | 5.334642e-49 | -8.615850e-47 |
| Msa0269060 | Msa0301460 | 0.821066 | 4.918026e-53 | -8.615850e-47 |
| Msa0269060 | Msa0301800 | 0.826801 | 2.222471e-54 | -8.615850e-47 |
| Msa0269060 | Msa0304870 | 0.821246 | 4.471932e-53 | -8.615850e-47 |
| Msa0269060 | Msa0306130 | 0.820883 | 5.420828e-53 | -8.615850e-47 |
| Msa0269060 | Msa0307490 | 0.810329 | 1.216729e-50 | -8.615850e-47 |
| Msa0269060 | Msa0307750 | 0.821383 | 4.156421e-53 | -8.615850e-47 |
| Msa0269060 | Msa0309160 | 0.803662 | 3.132251e-49 | -8.615850e-47 |
| Msa0269060 | Msa0317630 | 0.809962 | 1.459997e-50 | -8.615850e-47 |
| Msa0269060 | Msa0324060 | 0.809779 | 1.598610e-50 | -8.615850e-47 |
| Msa0269060 | Msa0338900 | 0.805753 | 1.146542e-49 | -8.615850e-47 |
| Msa0269060 | Msa0341260 | 0.821806 | 3.319213e-53 | -8.615850e-47 |
| Msa0269060 | Msa0344200 | 0.868264 | 7.427591e-66 | -8.615850e-47 |
| Msa0269060 | Msa0344240 | 0.813501 | 2.479656e-51 | -8.615850e-47 |
| Msa0269060 | Msa0344250 | 0.857443 | 1.626341e-62 | -8.615850e-47 |
| Msa0269060 | Msa0365150 | 0.834060 | 3.727719e-56 | -8.615850e-47 |
| Msa0269060 | Msa0370510 | 0.813496 | 2.485383e-51 | -8.615850e-47 |
| Msa0269060 | Msa0375430 | 0.800174 | 1.630972e-48 | -8.615850e-47 |
| Msa0269060 | Msa0377460 | 0.810929 | 9.025063e-51 | -8.615850e-47 |
| Msa0269060 | Msa0379900 | 0.801695 | 7.974594e-49 | -8.615850e-47 |
| Msa0269060 | Msa0380420 | 0.803608 | 3.214046e-49 | -8.615850e-47 |
| Msa0269060 | Msa0392410 | 0.822971 | 1.780550e-53 | -8.615850e-47 |
| Msa0269060 | Msa0392450 | 0.813855 | 2.071922e-51 | -8.615850e-47 |
| Msa0269060 | Msa0392480 | 0.810808 | 9.589447e-51 | -8.615850e-47 |
| Msa0269060 | Msa0417630 | 0.809826 | 1.561822e-50 | -8.615850e-47 |
| Msa0269060 | Msa0421800 | 0.811810 | 5.812522e-51 | -8.615850e-47 |
| Msa0269060 | Msa0423110 | 0.806296 | 8.812662e-50 | -8.615850e-47 |
| Msa0269060 | Msa0426860 | 0.825218 | 5.283270e-54 | -8.615850e-47 |
| Msa0269060 | Msa0426890 | 0.818250 | 2.161698e-52 | -8.615850e-47 |
| Msa0269060 | Msa0427050 | 0.836615 | 8.435971e-57 | -8.615850e-47 |
| Msa0269060 | Msa0434630 | 0.806597 | 7.615189e-50 | -8.615850e-47 |
| Msa0269060 | Msa0437700 | 0.800472 | 1.418246e-48 | -8.615850e-47 |
| Msa0269060 | Msa0449900 | 0.801275 | 9.724547e-49 | -8.615850e-47 |
| Msa0269060 | Msa0449930 | 0.827999 | 1.146750e-54 | -8.615850e-47 |
| Msa0269060 | Msa0456480 | 0.809569 | 1.773778e-50 | -8.615850e-47 |
| Msa0269060 | Msa0464500 | 0.815091 | 1.104046e-51 | -8.615850e-47 |
| Msa0269060 | Msa0466100 | 0.802868 | 4.573028e-49 | -8.615850e-47 |
| Msa0269060 | Msa0467800 | 0.803694 | 3.084389e-49 | -8.615850e-47 |
| Msa0269060 | Msa0473450 | 0.832197 | 1.084545e-55 | -8.615850e-47 |
| Msa0269060 | Msa0475830 | 0.809987 | 1.442138e-50 | -8.615850e-47 |
| Msa0269060 | Msa0482020 | 0.831256 | 1.850801e-55 | -8.615850e-47 |
| Msa0269060 | Msa0487560 | 0.831601 | 1.521490e-55 | -8.615850e-47 |
| Msa0269060 | Msa0487620 | 0.819767 | 9.767780e-53 | -8.615850e-47 |
| Msa0269060 | Msa0514260 | 0.810876 | 9.267039e-51 | -8.615850e-47 |
| Msa0269060 | Msa0517400 | 0.805215 | 1.486553e-49 | -8.615850e-47 |
| Msa0269060 | Msa0540340 | 0.812579 | 3.949224e-51 | -8.615850e-47 |
| Msa0269060 | Msa0542040 | 0.805919 | 1.058034e-49 | -8.615850e-47 |
| Msa0269060 | Msa0545910 | 0.802262 | 6.098354e-49 | -8.615850e-47 |
| Msa0269060 | Msa0547050 | 0.801591 | 8.374924e-49 | -8.615850e-47 |
| Msa0269060 | Msa0550720 | 0.811378 | 7.213072e-51 | -8.615850e-47 |
| Msa0269060 | Msa0558890 | 0.820181 | 7.856637e-53 | -8.615850e-47 |
| Msa0269060 | Msa0574450 | 0.803600 | 3.226944e-49 | -8.615850e-47 |
| Msa0269060 | Msa0577140 | 0.806552 | 7.783024e-50 | -8.615850e-47 |
| Msa0269060 | Msa0577910 | 0.805887 | 1.074313e-49 | -8.615850e-47 |
| Msa0269060 | Msa0582530 | 0.906710 | 1.109107e-80 | -8.615850e-47 |
| Msa0269060 | Msa0582570 | 0.861742 | 8.285142e-64 | -8.615850e-47 |
| Msa0269060 | Msa0582580 | 0.858178 | 9.849178e-63 | -8.615850e-47 |
| Msa0269060 | Msa0582620 | 0.920442 | 1.273233e-87 | -8.615850e-47 |
| Msa0269060 | Msa0582660 | 0.811534 | 6.673192e-51 | -8.615850e-47 |
| Msa0269060 | Msa0582710 | 0.933656 | 1.344465e-95 | -8.615850e-47 |
| Msa0269060 | Msa0582740 | 0.903018 | 5.345986e-79 | -8.615850e-47 |
| Msa0269060 | Msa0582830 | 0.918062 | 2.476537e-86 | -8.615850e-47 |
| Msa0269060 | Msa0582900 | 0.908075 | 2.539907e-81 | -8.615850e-47 |
| Msa0269060 | Msa0582930 | 0.822947 | 1.803773e-53 | -8.615850e-47 |
| Msa0269060 | Msa0586890 | 0.824654 | 7.180139e-54 | -8.615850e-47 |
| Msa0269060 | Msa0587060 | 0.827492 | 1.518343e-54 | -8.615850e-47 |
| Msa0269060 | Msa0591370 | 0.850058 | 2.170606e-60 | -8.615850e-47 |
| Msa0269060 | Msa0595780 | 0.829785 | 4.237302e-55 | -8.615850e-47 |
| Msa0269060 | Msa0601780 | 0.813846 | 2.081350e-51 | -8.615850e-47 |
| Msa0269060 | Msa0606060 | 0.804271 | 2.339942e-49 | -8.615850e-47 |
| Msa0269060 | Msa0606140 | 0.826022 | 3.406650e-54 | -8.615850e-47 |
| Msa0269060 | Msa0606680 | 0.817124 | 3.879640e-52 | -8.615850e-47 |
| Msa0269060 | Msa0615850 | 0.800513 | 1.391177e-48 | -8.615850e-47 |
| Msa0269060 | Msa0619060 | 0.815259 | 1.013092e-51 | -8.615850e-47 |
| Msa0269060 | Msa0622390 | 0.805736 | 1.156063e-49 | -8.615850e-47 |
| Msa0269060 | Msa0624240 | 0.813060 | 3.099013e-51 | -8.615850e-47 |
| Msa0269060 | Msa0626890 | 0.818175 | 2.247633e-52 | -8.615850e-47 |
| Msa0269060 | Msa0635990 | 0.815810 | 7.637717e-52 | -8.615850e-47 |
| Msa0269060 | Msa0640880 | 0.810703 | 1.010287e-50 | -8.615850e-47 |
| Msa0269060 | Msa0647110 | 0.828179 | 1.038155e-54 | -8.615850e-47 |
| Msa0269060 | Msa0653710 | 0.803828 | 2.893981e-49 | -8.615850e-47 |
| Msa0269060 | Msa0659640 | 0.809847 | 1.545275e-50 | -8.615850e-47 |
| Msa0269060 | Msa0664790 | 0.814523 | 1.475015e-51 | -8.615850e-47 |
| Msa0269060 | Msa0665010 | 0.805927 | 1.053835e-49 | -8.615850e-47 |
| Msa0269060 | Msa0668630 | 0.807424 | 5.089205e-50 | -8.615850e-47 |
| Msa0269060 | Msa0672350 | 0.803232 | 3.845174e-49 | -8.615850e-47 |
| Msa0269060 | Msa0685520 | 0.806244 | 9.036958e-50 | -8.615850e-47 |
| Msa0269060 | Msa0686610 | 0.804644 | 1.956284e-49 | -8.615850e-47 |
| Msa0269060 | Msa0698880 | 0.814206 | 1.733703e-51 | -8.615850e-47 |
| Msa0269060 | Msa0698900 | 0.819054 | 1.420177e-52 | -8.615850e-47 |
| Msa0269060 | Msa0702070 | 0.831078 | 2.046045e-55 | -8.615850e-47 |
| Msa0269060 | Msa0702120 | 0.823503 | 1.337618e-53 | -8.615850e-47 |
| Msa0269060 | Msa0704570 | 0.810407 | 1.170641e-50 | -8.615850e-47 |
| Msa0269060 | Msa0704750 | 0.810673 | 1.025224e-50 | -8.615850e-47 |
| Msa0269060 | Msa0705030 | 0.806266 | 8.940491e-50 | -8.615850e-47 |
| Msa0269060 | Msa0705610 | 0.808698 | 2.725505e-50 | -8.615850e-47 |
| Msa0269060 | Msa0706710 | 0.826006 | 3.437176e-54 | -8.615850e-47 |
| Msa0269060 | Msa0708120 | 0.808296 | 3.320914e-50 | -8.615850e-47 |
| Msa0269060 | Msa0716670 | 0.818252 | 2.159854e-52 | -8.615850e-47 |
| Msa0269060 | Msa0719340 | 0.800545 | 1.370476e-48 | -8.615850e-47 |
| Msa0269060 | Msa0727020 | 0.858165 | 9.933085e-63 | -8.615850e-47 |
| Msa0269060 | Msa0736330 | 0.814273 | 1.675978e-51 | -8.615850e-47 |
| Msa0269060 | Msa0736930 | 0.821533 | 3.839274e-53 | -8.615850e-47 |
| Msa0269060 | Msa0739570 | 0.813846 | 2.081445e-51 | -8.615850e-47 |
| Msa0269060 | Msa0766880 | 0.871672 | 5.716968e-67 | -8.615850e-47 |
| Msa0269060 | Msa0772210 | 0.840589 | 7.937474e-58 | -8.615850e-47 |
| Msa0269060 | Msa0778060 | 0.800329 | 1.517106e-48 | -8.615850e-47 |
| Msa0269060 | Msa0782330 | 0.817177 | 3.775351e-52 | -8.615850e-47 |
| Msa0269060 | Msa0796450 | 0.801698 | 7.962569e-49 | -8.615850e-47 |
| Msa0269060 | Msa0804930 | 0.847986 | 8.169709e-60 | -8.615850e-47 |
| Msa0269060 | Msa0821490 | 0.814164 | 1.771367e-51 | -8.615850e-47 |
| Msa0269060 | Msa0851870 | 0.803064 | 4.166815e-49 | -8.615850e-47 |
| Msa0269060 | Msa0855490 | 0.836979 | 6.809756e-57 | -8.615850e-47 |
| Msa0269060 | Msa0860270 | 0.813558 | 2.409069e-51 | -8.615850e-47 |
| Msa0269060 | Msa0867990 | 0.818290 | 2.117518e-52 | -8.615850e-47 |
| Msa0269060 | Msa0880060 | 0.801522 | 8.655103e-49 | -8.615850e-47 |
| Msa0269060 | Msa0900320 | 0.818946 | 1.503333e-52 | -8.615850e-47 |
| Msa0269060 | Msa0910650 | 0.829756 | 4.307293e-55 | -8.615850e-47 |
| Msa0269060 | Msa0924820 | 0.831425 | 1.681664e-55 | -8.615850e-47 |
| Msa0269060 | Msa0924860 | 0.862145 | 6.235992e-64 | -8.615850e-47 |
| Msa0269060 | Msa0924870 | 0.804845 | 1.776128e-49 | -8.615850e-47 |
| Msa0269060 | Msa0924890 | 0.851490 | 8.576770e-61 | -8.615850e-47 |
| Msa0269060 | Msa0925020 | 0.852701 | 3.885063e-61 | -8.615850e-47 |
| Msa0269060 | Msa0931090 | 0.908268 | 2.059028e-81 | -8.615850e-47 |
| Msa0269060 | Msa0931150 | 0.910497 | 1.753818e-82 | -8.615850e-47 |
| Msa0269060 | Msa0931200 | 0.852425 | 4.655694e-61 | -8.615850e-47 |
| Msa0269060 | Msa0931280 | 0.913994 | 3.224389e-84 | -8.615850e-47 |
| Msa0269060 | Msa0955310 | 0.802627 | 5.129031e-49 | -8.615850e-47 |
| Msa0269060 | Msa0959970 | 0.814143 | 1.789687e-51 | -8.615850e-47 |
| Msa0269060 | Msa0983670 | 0.849362 | 3.394943e-60 | -8.615850e-47 |
| Msa0269060 | Msa0983710 | 0.831429 | 1.678002e-55 | -8.615850e-47 |
| Msa0269060 | Msa0992570 | 0.825909 | 3.624379e-54 | -8.615850e-47 |
| Msa0269060 | Msa0992590 | 0.822770 | 1.983025e-53 | -8.615850e-47 |
| Msa0269060 | Msa1002040 | 0.825725 | 4.006965e-54 | -8.615850e-47 |
| Msa0269060 | Msa1022310 | 0.805075 | 1.590058e-49 | -8.615850e-47 |
| Msa0269060 | Msa1024580 | 0.826395 | 2.778093e-54 | -8.615850e-47 |
| Msa0269060 | Msa1030280 | 0.836003 | 1.206863e-56 | -8.615850e-47 |
| Msa0269060 | Msa1040770 | 0.811821 | 5.779046e-51 | -8.615850e-47 |
| Msa0269060 | Msa1049440 | 0.832127 | 1.128570e-55 | -8.615850e-47 |
| Msa0269060 | Msa1056520 | 0.803915 | 2.775198e-49 | -8.615850e-47 |
| Msa0269060 | Msa1063180 | 0.803575 | 3.264880e-49 | -8.615850e-47 |
| Msa0269060 | Msa1070900 | 0.825926 | 3.591984e-54 | -8.615850e-47 |
| Msa0269060 | Msa1079610 | 0.812436 | 4.242797e-51 | -8.615850e-47 |
| Msa0269060 | Msa1086020 | 0.867765 | 1.075184e-65 | -8.615850e-47 |
| Msa0269060 | Msa1086060 | 0.912070 | 2.966029e-83 | -8.615850e-47 |
| Msa0269060 | Msa1086160 | 0.896890 | 2.388922e-76 | -8.615850e-47 |
| Msa0269060 | Msa1086170 | 0.922014 | 1.704414e-88 | -8.615850e-47 |
| Msa0269060 | Msa1086260 | 0.852727 | 3.817896e-61 | -8.615850e-47 |
| Msa0269060 | Msa1086290 | 0.932495 | 7.821094e-95 | -8.615850e-47 |
| Msa0269060 | Msa1086330 | 0.852117 | 5.697137e-61 | -8.615850e-47 |
| Msa0269060 | Msa1086340 | 0.861842 | 7.720148e-64 | -8.615850e-47 |
| Msa0269060 | Msa1086370 | 0.910157 | 2.564734e-82 | -8.615850e-47 |
| Msa0269060 | Msa1086410 | 0.820551 | 6.462742e-53 | -8.615850e-47 |
| Msa0269060 | Msa1086440 | 0.883657 | 3.728031e-71 | -8.615850e-47 |
| Msa0269060 | Msa1086480 | 0.906880 | 9.240463e-81 | -8.615850e-47 |
| Msa0269060 | Msa1086520 | 0.848350 | 6.481373e-60 | -8.615850e-47 |
| Msa0269060 | Msa1086630 | 0.863903 | 1.784825e-64 | -8.615850e-47 |
| Msa0269060 | Msa1086690 | 0.867594 | 1.219625e-65 | -8.615850e-47 |
| Msa0269060 | Msa1086830 | 0.863958 | 1.716063e-64 | -8.615850e-47 |
| Msa0269060 | Msa1086870 | 0.899031 | 2.961951e-77 | -8.615850e-47 |
| Msa0269060 | Msa1087000 | 0.820812 | 5.628043e-53 | -8.615850e-47 |
| Msa0269060 | Msa1090230 | 0.838752 | 2.386409e-57 | -8.615850e-47 |
| Msa0269060 | Msa1091690 | 0.875865 | 2.198633e-68 | -8.615850e-47 |
| Msa0269060 | Msa1120540 | 0.810021 | 1.417725e-50 | -8.615850e-47 |
| Msa0269060 | Msa1123340 | 0.828521 | 8.584868e-55 | -8.615850e-47 |
| Msa0269060 | Msa1124440 | 0.827775 | 1.298320e-54 | -8.615850e-47 |
| Msa0269060 | Msa1126910 | 0.802383 | 5.759197e-49 | -8.615850e-47 |
| Msa0269060 | Msa1128350 | 0.814251 | 1.694099e-51 | -8.615850e-47 |
| Msa0269060 | Msa1130700 | 0.819572 | 1.082366e-52 | -8.615850e-47 |
| Msa0269060 | Msa1131010 | 0.800506 | 1.396058e-48 | -8.615850e-47 |
| Msa0269060 | Msa1132540 | 0.820148 | 7.991501e-53 | -8.615850e-47 |
| Msa0269060 | Msa1143140 | 0.891727 | 3.050578e-74 | -8.615850e-47 |
| Msa0269060 | Msa1143150 | 0.829262 | 5.680638e-55 | -8.615850e-47 |
| Msa0269060 | Msa1157160 | 0.830141 | 3.470985e-55 | -8.615850e-47 |
| Msa0269060 | Msa1166180 | 0.804364 | 2.237764e-49 | -8.615850e-47 |
| Msa0269060 | Msa1166280 | 0.804170 | 2.455881e-49 | -8.615850e-47 |
| Msa0269060 | Msa1168130 | 0.804335 | 2.269592e-49 | -8.615850e-47 |
| Msa0269060 | Msa1173410 | 0.808377 | 3.191722e-50 | -8.615850e-47 |
| Msa0269060 | Msa1195860 | 0.848255 | 6.887062e-60 | -8.615850e-47 |
| Msa0269060 | Msa1198420 | 0.815018 | 1.146089e-51 | -8.615850e-47 |
| Msa0269060 | Msa1199210 | 0.809310 | 2.016091e-50 | -8.615850e-47 |
| Msa0269060 | Msa1199690 | 0.823074 | 1.684634e-53 | -8.615850e-47 |
| Msa0269060 | Msa1209390 | 0.831026 | 2.107955e-55 | -8.615850e-47 |
| Msa0269060 | Msa1209650 | 0.819401 | 1.184393e-52 | -8.615850e-47 |
| Msa0269060 | Msa1220740 | 0.820790 | 5.695248e-53 | -8.615850e-47 |
| Msa0269060 | Msa1248400 | 0.821486 | 3.935282e-53 | -8.615850e-47 |
| Msa0269060 | Msa1252040 | 0.805110 | 1.563895e-49 | -8.615850e-47 |
| Msa0269060 | Msa1264230 | 0.803284 | 3.751660e-49 | -8.615850e-47 |
| Msa0269060 | Msa1284030 | 0.828937 | 6.809394e-55 | -8.615850e-47 |
| Msa0269060 | Msa1298740 | 0.843917 | 1.042929e-58 | -8.615850e-47 |
| Msa0269060 | Msa1300880 | 0.805952 | 1.041292e-49 | -8.615850e-47 |
| Msa0269060 | Msa1302920 | 0.825754 | 3.945775e-54 | -8.615850e-47 |
| Msa0269060 | Msa1309910 | 0.843284 | 1.539941e-58 | -8.615850e-47 |
| Msa0269060 | Msa1319520 | 0.816661 | 4.929522e-52 | -8.615850e-47 |
| Msa0269060 | Msa1323060 | 0.818399 | 2.000302e-52 | -8.615850e-47 |
| Msa0269060 | Msa1325650 | 0.803407 | 3.537605e-49 | -8.615850e-47 |
| Msa0269060 | Msa1325980 | 0.802376 | 5.778681e-49 | -8.615850e-47 |
| Msa0269060 | Msa1327820 | 0.841906 | 3.575415e-58 | -8.615850e-47 |
| Msa0269060 | Msa1331900 | 0.809754 | 1.618754e-50 | -8.615850e-47 |
| Msa0269060 | Msa1334650 | 0.814633 | 1.394634e-51 | -8.615850e-47 |
| Msa0269060 | Msa1342030 | 0.802572 | 5.265252e-49 | -8.615850e-47 |
| Msa0269060 | Msa1351560 | 0.818026 | 2.430040e-52 | -8.615850e-47 |
| Msa0269060 | Msa1352820 | 0.811350 | 7.317567e-51 | -8.615850e-47 |
| Msa0269060 | Msa1354850 | 0.872428 | 3.205706e-67 | -8.615850e-47 |
| Msa0269060 | Msa1354890 | 0.900142 | 9.848361e-78 | -8.615850e-47 |
| Msa0269060 | Msa1354930 | 0.803981 | 2.689765e-49 | -8.615850e-47 |
| Msa0269060 | Msa1355020 | 0.871382 | 7.131943e-67 | -8.615850e-47 |
| Msa0269060 | Msa1355060 | 0.882470 | 1.014267e-70 | -8.615850e-47 |
| Msa0269060 | Msa1355100 | 0.803020 | 4.253990e-49 | -8.615850e-47 |
| Msa0269060 | Msa1365210 | 0.823463 | 1.366304e-53 | -8.615850e-47 |
| Msa0269060 | Msa1367940 | 0.808792 | 2.601598e-50 | -8.615850e-47 |
| Msa0269060 | Msa1371250 | 0.830665 | 2.583641e-55 | -8.615850e-47 |
| Msa0269060 | Msa1375630 | 0.806882 | 6.629528e-50 | -8.615850e-47 |
| Msa0269060 | Msa1376530 | 0.801046 | 1.083088e-48 | -8.615850e-47 |
| Msa0269060 | Msa1380540 | 0.861627 | 8.981848e-64 | -8.615850e-47 |
| Msa0269060 | Msa1380580 | 0.819259 | 1.275524e-52 | -8.615850e-47 |
| Msa0269060 | Msa1380600 | 0.807225 | 5.609738e-50 | -8.615850e-47 |
| Msa0269060 | Msa1385940 | 0.841201 | 5.486000e-58 | -8.615850e-47 |
| Msa0269060 | Msa1387090 | 0.809862 | 1.534332e-50 | -8.615850e-47 |
| Msa0269060 | Msa1390410 | 0.801854 | 7.396590e-49 | -8.615850e-47 |
| Msa0269060 | Msa1394050 | 0.820066 | 8.347446e-53 | -8.615850e-47 |
| Msa0269060 | Msa1394090 | 0.868037 | 8.792089e-66 | -8.615850e-47 |
| Msa0269060 | Msa1394100 | 0.863574 | 2.258682e-64 | -8.615850e-47 |
| Msa0269060 | Msa1394140 | 0.876303 | 1.554233e-68 | -8.615850e-47 |
| Msa0269060 | Msa1394170 | 0.830971 | 2.174089e-55 | -8.615850e-47 |
| Msa0269060 | Msa1394240 | 0.901888 | 1.698616e-78 | -8.615850e-47 |
| Msa0269060 | Msa1394280 | 0.860959 | 1.435371e-63 | -8.615850e-47 |
| Msa0269060 | Msa1406230 | 0.811553 | 6.610358e-51 | -8.615850e-47 |
| Msa0269060 | Msa1415120 | 0.840946 | 6.401879e-58 | -8.615850e-47 |
| Msa0269060 | Msa1422750 | 0.803309 | 3.707123e-49 | -8.615850e-47 |
| Msa0269060 | Msa1426870 | 0.828668 | 7.910354e-55 | -8.615850e-47 |
| Msa0269060 | Msa1427020 | 0.806447 | 8.190400e-50 | -8.615850e-47 |
| Msa0269060 | Msa1430940 | 0.819464 | 1.145749e-52 | -8.615850e-47 |
| Msa0269060 | Msa1435470 | 0.826825 | 2.193315e-54 | -8.615850e-47 |
| Msa0269060 | Msa1438420 | 0.805175 | 1.515354e-49 | -8.615850e-47 |
| Msa0269060 | Msa1439800 | 0.811367 | 7.253528e-51 | -8.615850e-47 |
| Msa0269060 | Msa1458920 | 0.813366 | 2.653934e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269060 | MtrunA17_Chr4g0015681 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa0269060 | MtrunA17_CPg0492901 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Msa0269060 | MtrunA17_Chr4g0016771 | 96.667 | 60 | 2 | 0 | 1 | 60 | 1 | 60 | 7.64e-35 | 113 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0269060 | ATCG00070.1 | 76.667 | 60 | 14 | 0 | 1 | 60 | 1 | 60 | 3.76e-26 | 92.0 |
| Msa0269060 | ATCG00080.1 | 97.222 | 36 | 1 | 0 | 62 | 97 | 1 | 36 | 2.92e-19 | 73.9 |
Find 6 sgRNAs with CRISPR-Local
Find 30 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCTTAATATCTTTAGCT+TGG | 0.440922 | 2_2:-70494545 | Msa0269060:CDS |
| ACTGGCATAAAATCTACAAT+TGG | 0.453871 | 2_2:+70494442 | None:intergenic |
| AATGATCCAGGACGTAATCC+TGG | 0.474800 | 2_2:-70493895 | Msa0269060:CDS |
| GGATTCCTATCTAATGATCC+AGG | 0.536202 | 2_2:-70493907 | Msa0269060:CDS |
| TCACGTCCAGGATTACGTCC+TGG | 0.548081 | 2_2:+70493889 | None:intergenic |
| TACGTCCTGGATCATTAGAT+AGG | 0.581605 | 2_2:+70493902 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTCCAAATATTAAAATTTT+TGG | - | chr2_2:70494171-70494190 | Msa0269060:intron | 10.0% |
| !!! | TATCCAAAAATTTTAATATT+TGG | + | chr2_2:70494177-70494196 | None:intergenic | 10.0% |
| !! | ATTTCAAAAAAAAAAAACTT+AGG | + | chr2_2:70494328-70494347 | None:intergenic | 10.0% |
| !!! | AATTTTAATATTTGGAATCA+AGG | + | chr2_2:70494169-70494188 | None:intergenic | 15.0% |
| !!! | CGTTTTTTTTTTAATTATCT+TGG | - | chr2_2:70494423-70494442 | Msa0269060:CDS | 15.0% |
| !! | GAAAAAACTACTTGAATAAA+GGG | + | chr2_2:70493928-70493947 | None:intergenic | 20.0% |
| !! | AGAAAAAACTACTTGAATAA+AGG | + | chr2_2:70493929-70493948 | None:intergenic | 20.0% |
| !!! | TTATTCAAGTAGTTTTTTCT+TGG | - | chr2_2:70493929-70493948 | Msa0269060:CDS | 20.0% |
| !! | TGAAAATTCTATTATTCGAT+TGG | - | chr2_2:70494215-70494234 | Msa0269060:intron | 20.0% |
| !!! | TGTGGATATGAAAAAAATTT+TGG | - | chr2_2:70494266-70494285 | Msa0269060:intron | 20.0% |
| !! | TCTTATAAACTTAGTATCAA+AGG | - | chr2_2:70494357-70494376 | Msa0269060:intron | 20.0% |
| !!! | TTTTTCTCTTAGCTTTTGTT+TGG | - | chr2_2:70494021-70494040 | Msa0269060:intron | 25.0% |
| !!! | TTTGTTTCTCTTTTCATCTT+CGG | - | chr2_2:70494498-70494517 | Msa0269060:CDS | 25.0% |
| ! | AATTGGATTCAAAAAAGCGT+AGG | + | chr2_2:70493970-70493989 | None:intergenic | 30.0% |
| ACTGGCATAAAATCTACAAT+TGG | + | chr2_2:70493987-70494006 | None:intergenic | 30.0% | |
| !! | AAAAAGAGTAAGGGTATTAC+TGG | + | chr2_2:70494005-70494024 | None:intergenic | 30.0% |
| GCTAAGAGAAAAAAGAGTAA+GGG | + | chr2_2:70494014-70494033 | None:intergenic | 30.0% | |
| AGCTAAGAGAAAAAAGAGTA+AGG | + | chr2_2:70494015-70494034 | None:intergenic | 30.0% | |
| !! | AATCAAGATCTAGGTATTGG+TGG | + | chr2_2:70494247-70494266 | None:intergenic | 35.0% |
| CACAATCAAGATCTAGGTAT+TGG | + | chr2_2:70494250-70494269 | None:intergenic | 35.0% | |
| CAATACCTAGATCTTGATTG+TGG | - | chr2_2:70494248-70494267 | Msa0269060:intron | 35.0% | |
| CATATCCACAATCAAGATCT+AGG | + | chr2_2:70494256-70494275 | None:intergenic | 35.0% | |
| GAGAATCTATTCTCTTTCTC+TGG | - | chr2_2:70494400-70494419 | Msa0269060:CDS | 35.0% | |
| ! | TTCAAAAAAGCGTAGGCTTC+AGG | + | chr2_2:70493963-70493982 | None:intergenic | 40.0% |
| GGATTCCTATCTAATGATCC+AGG | - | chr2_2:70494519-70494538 | Msa0269060:CDS | 40.0% | |
| TACGTCCTGGATCATTAGAT+AGG | + | chr2_2:70494527-70494546 | None:intergenic | 40.0% | |
| !! | CAAGATCTAGGTATTGGTGG+TGG | + | chr2_2:70494244-70494263 | None:intergenic | 45.0% |
| AATGATCCAGGACGTAATCC+TGG | - | chr2_2:70494531-70494550 | Msa0269060:CDS | 45.0% | |
| !!! | AATAAATTCTTAATTTTTTT+CGG | + | chr2_2:70494092-70494111 | None:intergenic | 5.0% |
| TCACGTCCAGGATTACGTCC+TGG | + | chr2_2:70494540-70494559 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 70493882 | 70494566 | 70493882 | ID=Msa0269060;Name=Msa0269060 |
| chr2_2 | mRNA | 70493882 | 70494566 | 70493882 | ID=Msa0269060-mRNA-1;Parent=Msa0269060;Name=Msa0269060-mRNA-1;_AED=0.46;_eAED=0.46;_QI=0|0|0|1|0|0|2|0|97 |
| chr2_2 | exon | 70494392 | 70494566 | 70494392 | ID=Msa0269060-mRNA-1:exon:22772;Parent=Msa0269060-mRNA-1 |
| chr2_2 | exon | 70493882 | 70494000 | 70493882 | ID=Msa0269060-mRNA-1:exon:22771;Parent=Msa0269060-mRNA-1 |
| chr2_2 | CDS | 70494392 | 70494566 | 70494392 | ID=Msa0269060-mRNA-1:cds;Parent=Msa0269060-mRNA-1 |
| chr2_2 | CDS | 70493882 | 70494000 | 70493882 | ID=Msa0269060-mRNA-1:cds;Parent=Msa0269060-mRNA-1 |
| Gene Sequence |
| Protein sequence |
