Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0528840 | XP_013456762.1 | 98.422 | 507 | 8 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1046 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0528840 | sp|Q6NQ51|RRT4_ARATH | 71.881 | 505 | 136 | 2 | 1 | 505 | 1 | 499 | 0.0 | 761 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0528840 | A0A072UP41 | 98.422 | 507 | 8 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1046 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007570 | Msa0528840 | 0.814249 | 1.696166e-51 | -8.615850e-47 |
Msa0028940 | Msa0528840 | 0.801665 | 8.087568e-49 | -8.615850e-47 |
Msa0029280 | Msa0528840 | 0.810779 | 9.726599e-51 | -8.615850e-47 |
Msa0035510 | Msa0528840 | 0.817200 | 3.731065e-52 | -8.615850e-47 |
Msa0035590 | Msa0528840 | 0.815989 | 6.967351e-52 | -8.615850e-47 |
Msa0039590 | Msa0528840 | 0.833250 | 5.939072e-56 | -8.615850e-47 |
Msa0076100 | Msa0528840 | 0.818213 | 2.204702e-52 | -8.615850e-47 |
Msa0121080 | Msa0528840 | 0.808993 | 2.356858e-50 | -8.615850e-47 |
Msa0132080 | Msa0528840 | 0.818689 | 1.719731e-52 | -8.615850e-47 |
Msa0133390 | Msa0528840 | 0.818281 | 2.127926e-52 | -8.615850e-47 |
Msa0138340 | Msa0528840 | 0.807361 | 5.248211e-50 | -8.615850e-47 |
Msa0147960 | Msa0528840 | 0.807308 | 5.385482e-50 | -8.615850e-47 |
Msa0164580 | Msa0528840 | 0.802985 | 4.325498e-49 | -8.615850e-47 |
Msa0184800 | Msa0528840 | 0.816307 | 5.916272e-52 | -8.615850e-47 |
Msa0195810 | Msa0528840 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
Msa0199160 | Msa0528840 | 0.829014 | 6.523830e-55 | -8.615850e-47 |
Msa0207150 | Msa0528840 | 0.817094 | 3.941701e-52 | -8.615850e-47 |
Msa0209370 | Msa0528840 | 0.801395 | 9.188317e-49 | -8.615850e-47 |
Msa0237650 | Msa0528840 | 0.813273 | 2.782510e-51 | -8.615850e-47 |
Msa0238530 | Msa0528840 | 0.802610 | 5.169388e-49 | -8.615850e-47 |
Msa0365350 | Msa0528840 | 0.810160 | 1.323230e-50 | -8.615850e-47 |
Msa0375570 | Msa0528840 | 0.817423 | 3.323279e-52 | -8.615850e-47 |
Msa0377990 | Msa0528840 | 0.818393 | 2.007089e-52 | -8.615850e-47 |
Msa0382020 | Msa0528840 | 0.804907 | 1.724046e-49 | -8.615850e-47 |
Msa0383110 | Msa0528840 | 0.814874 | 1.233735e-51 | -8.615850e-47 |
Msa0383380 | Msa0528840 | 0.805706 | 1.172959e-49 | -8.615850e-47 |
Msa0424220 | Msa0528840 | 0.812655 | 3.800780e-51 | -8.615850e-47 |
Msa0427260 | Msa0528840 | 0.802360 | 5.821343e-49 | -8.615850e-47 |
Msa0427600 | Msa0528840 | 0.802461 | 5.550310e-49 | -8.615850e-47 |
Msa0450230 | Msa0528840 | 0.850593 | 1.535772e-60 | -8.615850e-47 |
Msa0450430 | Msa0528840 | 0.803693 | 3.086001e-49 | -8.615850e-47 |
Msa0471130 | Msa0528840 | 0.802776 | 4.778591e-49 | -8.615850e-47 |
Msa0246470 | Msa0528840 | 0.819353 | 1.214476e-52 | -8.615850e-47 |
Msa0246510 | Msa0528840 | 0.829328 | 5.474192e-55 | -8.615850e-47 |
Msa0259450 | Msa0528840 | 0.808890 | 2.479605e-50 | -8.615850e-47 |
Msa0259570 | Msa0528840 | 0.802527 | 5.377494e-49 | -8.615850e-47 |
Msa0269430 | Msa0528840 | 0.807571 | 4.735769e-50 | -8.615850e-47 |
Msa0305630 | Msa0528840 | 0.809634 | 1.717098e-50 | -8.615850e-47 |
Msa0309490 | Msa0528840 | 0.814983 | 1.166815e-51 | -8.615850e-47 |
Msa0315720 | Msa0528840 | 0.817624 | 2.993684e-52 | -8.615850e-47 |
Msa0315760 | Msa0528840 | 0.802221 | 6.217541e-49 | -8.615850e-47 |
Msa0323790 | Msa0528840 | 0.834505 | 2.883000e-56 | -8.615850e-47 |
Msa0333350 | Msa0528840 | 0.816766 | 4.668901e-52 | -8.615850e-47 |
Msa0358750 | Msa0528840 | 0.806636 | 7.472949e-50 | -8.615850e-47 |
Msa0491160 | Msa0528840 | 0.802197 | 6.288441e-49 | -8.615850e-47 |
Msa0511040 | Msa0528840 | 0.836183 | 1.086597e-56 | -8.615850e-47 |
Msa0511930 | Msa0528840 | 0.803743 | 3.012905e-49 | -8.615850e-47 |
Msa0518150 | Msa0528840 | 0.807100 | 5.960264e-50 | -8.615850e-47 |
Msa0520480 | Msa0528840 | 0.809302 | 2.023912e-50 | -8.615850e-47 |
Msa0521190 | Msa0528840 | 0.811406 | 7.112429e-51 | -8.615850e-47 |
Msa0524570 | Msa0528840 | 0.816738 | 4.737856e-52 | -8.615850e-47 |
Msa0527210 | Msa0528840 | 0.805644 | 1.208225e-49 | -8.615850e-47 |
Msa0528730 | Msa0528840 | 0.843758 | 1.150619e-58 | -8.615850e-47 |
Msa0528830 | Msa0528840 | 0.838179 | 3.354122e-57 | -8.615850e-47 |
Msa0528840 | Msa0531270 | 0.807855 | 4.122736e-50 | -8.615850e-47 |
Msa0528840 | Msa0538050 | 0.811947 | 5.426277e-51 | -8.615850e-47 |
Msa0528840 | Msa0552660 | 0.810973 | 8.832858e-51 | -8.615850e-47 |
Msa0528840 | Msa0568300 | 0.827388 | 1.607809e-54 | -8.615850e-47 |
Msa0528840 | Msa0569540 | 0.840869 | 6.705473e-58 | -8.615850e-47 |
Msa0528840 | Msa0572730 | 0.841098 | 5.837904e-58 | -8.615850e-47 |
Msa0528840 | Msa0573940 | 0.811507 | 6.762889e-51 | -8.615850e-47 |
Msa0528840 | Msa0576550 | 0.811384 | 7.193503e-51 | -8.615850e-47 |
Msa0528840 | Msa0578400 | 0.801386 | 9.227767e-49 | -8.615850e-47 |
Msa0528840 | Msa0585720 | 0.818435 | 1.962771e-52 | -8.615850e-47 |
Msa0528840 | Msa0585810 | 0.822043 | 2.924712e-53 | -8.615850e-47 |
Msa0528840 | Msa0625900 | 0.825522 | 4.476649e-54 | -8.615850e-47 |
Msa0528840 | Msa0628440 | 0.816254 | 6.079633e-52 | -8.615850e-47 |
Msa0528840 | Msa0646030 | 0.804500 | 2.097286e-49 | -8.615850e-47 |
Msa0528840 | Msa0662230 | 0.803539 | 3.322590e-49 | -8.615850e-47 |
Msa0528840 | Msa0662670 | 0.811600 | 6.454704e-51 | -8.615850e-47 |
Msa0528840 | Msa0663580 | 0.815967 | 7.047366e-52 | -8.615850e-47 |
Msa0528840 | Msa0663690 | 0.824226 | 9.051138e-54 | -8.615850e-47 |
Msa0528840 | Msa0685810 | 0.813348 | 2.678713e-51 | -8.615850e-47 |
Msa0528840 | Msa0685860 | 0.810788 | 9.686142e-51 | -8.615850e-47 |
Msa0528840 | Msa0692450 | 0.847798 | 9.203873e-60 | -8.615850e-47 |
Msa0528840 | Msa0692480 | 0.824430 | 8.104653e-54 | -8.615850e-47 |
Msa0528840 | Msa0692710 | 0.808427 | 3.114582e-50 | -8.615850e-47 |
Msa0528840 | Msa0704790 | 0.813613 | 2.342919e-51 | -8.615850e-47 |
Msa0528840 | Msa0708380 | 0.812773 | 3.581377e-51 | -8.615850e-47 |
Msa0528840 | Msa0708870 | 0.813948 | 1.976500e-51 | -8.615850e-47 |
Msa0528840 | Msa0717540 | 0.821151 | 4.702820e-53 | -8.615850e-47 |
Msa0528840 | Msa0738460 | 0.812899 | 3.360291e-51 | -8.615850e-47 |
Msa0528840 | Msa0744690 | 0.829138 | 6.085598e-55 | -8.615850e-47 |
Msa0528840 | Msa0754020 | 0.803776 | 2.966243e-49 | -8.615850e-47 |
Msa0528840 | Msa0758880 | 0.803142 | 4.014657e-49 | -8.615850e-47 |
Msa0528840 | Msa0766540 | 0.801429 | 9.042618e-49 | -8.615850e-47 |
Msa0528840 | Msa0772160 | 0.811488 | 6.827109e-51 | -8.615850e-47 |
Msa0528840 | Msa0781030 | 0.803414 | 3.525962e-49 | -8.615850e-47 |
Msa0528840 | Msa0797180 | 0.808979 | 2.372725e-50 | -8.615850e-47 |
Msa0528840 | Msa0807100 | 0.804558 | 2.039323e-49 | -8.615850e-47 |
Msa0528840 | Msa0817880 | 0.821472 | 3.966154e-53 | -8.615850e-47 |
Msa0528840 | Msa0833030 | 0.801643 | 8.172680e-49 | -8.615850e-47 |
Msa0528840 | Msa0840450 | 0.803675 | 3.113582e-49 | -8.615850e-47 |
Msa0528840 | Msa0861400 | 0.839677 | 1.373289e-57 | -8.615850e-47 |
Msa0528840 | Msa0871790 | 0.825777 | 3.895975e-54 | -8.615850e-47 |
Msa0528840 | Msa0879820 | 0.800910 | 1.154590e-48 | -8.615850e-47 |
Msa0528840 | Msa0888900 | 0.803799 | 2.933372e-49 | -8.615850e-47 |
Msa0528840 | Msa0917630 | 0.805373 | 1.377096e-49 | -8.615850e-47 |
Msa0528840 | Msa0968060 | 0.810375 | 1.189595e-50 | -8.615850e-47 |
Msa0528840 | Msa1031620 | 0.814252 | 1.693348e-51 | -8.615850e-47 |
Msa0528840 | Msa1036260 | 0.804731 | 1.876147e-49 | -8.615850e-47 |
Msa0528840 | Msa1056790 | 0.832847 | 7.481543e-56 | -8.615850e-47 |
Msa0528840 | Msa1084210 | 0.810463 | 1.138378e-50 | -8.615850e-47 |
Msa0528840 | Msa1088000 | 0.804889 | 1.739050e-49 | -8.615850e-47 |
Msa0528840 | Msa1092430 | 0.807693 | 4.461688e-50 | -8.615850e-47 |
Msa0528840 | Msa1113460 | 0.809917 | 1.492603e-50 | -8.615850e-47 |
Msa0528840 | Msa1118870 | 0.812761 | 3.603445e-51 | -8.615850e-47 |
Msa0528840 | Msa1118890 | 0.819055 | 1.420007e-52 | -8.615850e-47 |
Msa0528840 | Msa1128230 | 0.814275 | 1.673500e-51 | -8.615850e-47 |
Msa0528840 | Msa1130850 | 0.800234 | 1.586022e-48 | -8.615850e-47 |
Msa0528840 | Msa1158540 | 0.809968 | 1.455355e-50 | -8.615850e-47 |
Msa0528840 | Msa1169600 | 0.803460 | 3.448777e-49 | -8.615850e-47 |
Msa0528840 | Msa1184100 | 0.806505 | 7.964061e-50 | -8.615850e-47 |
Msa0528840 | Msa1191960 | 0.827057 | 1.930134e-54 | -8.615850e-47 |
Msa0528840 | Msa1202710 | 0.807556 | 4.770881e-50 | -8.615850e-47 |
Msa0528840 | Msa1204900 | 0.800744 | 1.248446e-48 | -8.615850e-47 |
Msa0528840 | Msa1215790 | 0.808114 | 3.631731e-50 | -8.615850e-47 |
Msa0528840 | Msa1228600 | 0.821584 | 3.735766e-53 | -8.615850e-47 |
Msa0528840 | Msa1229880 | 0.807221 | 5.618153e-50 | -8.615850e-47 |
Msa0528840 | Msa1267390 | 0.812952 | 3.272596e-51 | -8.615850e-47 |
Msa0528840 | Msa1269370 | 0.810207 | 1.292563e-50 | -8.615850e-47 |
Msa0528840 | Msa1301610 | 0.817834 | 2.684055e-52 | -8.615850e-47 |
Msa0528840 | Msa1308010 | 0.803979 | 2.692366e-49 | -8.615850e-47 |
Msa0528840 | Msa1308430 | 0.800149 | 1.650258e-48 | -8.615850e-47 |
Msa0528840 | Msa1310620 | 0.807267 | 5.495422e-50 | -8.615850e-47 |
Msa0528840 | Msa1326800 | 0.808554 | 2.925109e-50 | -8.615850e-47 |
Msa0528840 | Msa1327690 | 0.822177 | 2.723014e-53 | -8.615850e-47 |
Msa0528840 | Msa1338600 | 0.805906 | 1.064627e-49 | -8.615850e-47 |
Msa0528840 | Msa1348860 | 0.818551 | 1.847453e-52 | -8.615850e-47 |
Msa0528840 | Msa1357090 | 0.803939 | 2.743669e-49 | -8.615850e-47 |
Msa0528840 | Msa1371540 | 0.802507 | 5.429177e-49 | -8.615850e-47 |
Msa0528840 | Msa1373570 | 0.808237 | 3.418802e-50 | -8.615850e-47 |
Msa0528840 | Msa1375980 | 0.820119 | 8.115298e-53 | -8.615850e-47 |
Msa0528840 | Msa1377980 | 0.838944 | 2.127557e-57 | -8.615850e-47 |
Msa0528840 | Msa1379270 | 0.804846 | 1.775254e-49 | -8.615850e-47 |
Msa0528840 | Msa1401640 | 0.822578 | 2.198068e-53 | -8.615850e-47 |
Msa0528840 | Msa1403820 | 0.813491 | 2.492067e-51 | -8.615850e-47 |
Msa0528840 | Msa1408280 | 0.838656 | 2.526180e-57 | -8.615850e-47 |
Msa0528840 | Msa1408860 | 0.802423 | 5.651452e-49 | -8.615850e-47 |
Msa0528840 | Msa1411930 | 0.800498 | 1.401046e-48 | -8.615850e-47 |
Msa0528840 | Msa1422160 | 0.808590 | 2.873768e-50 | -8.615850e-47 |
Msa0528840 | Msa1429180 | 0.801390 | 9.210405e-49 | -8.615850e-47 |
Msa0528840 | Msa1452800 | 0.810659 | 1.032411e-50 | -8.615850e-47 |
Msa0528840 | Msa1453180 | 0.809614 | 1.734751e-50 | -8.615850e-47 |
Msa0528840 | Msa1456170 | 0.809816 | 1.569655e-50 | -8.615850e-47 |
Msa0528840 | Msa1456180 | 0.899537 | 1.796868e-77 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0528840 | MtrunA17_Chr4g0042711 | 98.422 | 507 | 8 | 0 | 1 | 507 | 1 | 507 | 0.0 | 1046 |
Msa0528840 | MtrunA17_Chr5g0417871 | 80.041 | 486 | 90 | 3 | 28 | 506 | 9 | 494 | 0.0 | 823 |
Msa0528840 | MtrunA17_Chr6g0455571 | 59.006 | 483 | 196 | 2 | 8 | 488 | 25 | 507 | 0.0 | 605 |
Msa0528840 | MtrunA17_Chr4g0061781 | 61.588 | 466 | 173 | 2 | 29 | 488 | 43 | 508 | 0.0 | 603 |
Msa0528840 | MtrunA17_Chr2g0307971 | 57.809 | 493 | 202 | 3 | 8 | 499 | 30 | 517 | 0.0 | 597 |
Msa0528840 | MtrunA17_Chr5g0426591 | 48.675 | 415 | 201 | 4 | 87 | 489 | 97 | 511 | 1.93e-140 | 414 |
Msa0528840 | MtrunA17_Chr4g0070551 | 48.485 | 396 | 197 | 5 | 97 | 490 | 228 | 618 | 9.24e-136 | 406 |
Msa0528840 | MtrunA17_Chr4g0008451 | 48.371 | 399 | 199 | 5 | 97 | 493 | 232 | 625 | 3.46e-134 | 402 |
Msa0528840 | MtrunA17_Chr3g0132371 | 47.952 | 415 | 201 | 5 | 87 | 489 | 127 | 538 | 1.42e-131 | 392 |
Msa0528840 | MtrunA17_Chr5g0436321 | 46.599 | 397 | 205 | 5 | 96 | 490 | 160 | 551 | 1.82e-129 | 388 |
Msa0528840 | MtrunA17_Chr3g0129981 | 45.735 | 422 | 200 | 8 | 87 | 489 | 100 | 511 | 1.25e-124 | 374 |
Msa0528840 | MtrunA17_Chr3g0143821 | 43.358 | 399 | 207 | 9 | 98 | 492 | 112 | 495 | 6.11e-100 | 312 |
Msa0528840 | MtrunA17_Chr5g0399311 | 42.410 | 415 | 214 | 10 | 92 | 499 | 119 | 515 | 3.46e-99 | 308 |
Msa0528840 | MtrunA17_Chr4g0056061 | 40.876 | 411 | 220 | 8 | 93 | 497 | 104 | 497 | 3.31e-98 | 306 |
Msa0528840 | MtrunA17_Chr5g0448581 | 40.393 | 458 | 239 | 11 | 54 | 505 | 90 | 519 | 1.52e-97 | 306 |
Msa0528840 | MtrunA17_Chr1g0204121 | 39.716 | 423 | 223 | 11 | 83 | 492 | 74 | 477 | 5.18e-93 | 292 |
Msa0528840 | MtrunA17_Chr5g0412251 | 38.051 | 431 | 218 | 9 | 97 | 491 | 86 | 503 | 1.17e-90 | 286 |
Msa0528840 | MtrunA17_Chr3g0123521 | 39.487 | 390 | 216 | 7 | 90 | 464 | 144 | 528 | 2.31e-89 | 284 |
Msa0528840 | MtrunA17_Chr3g0132951 | 36.613 | 437 | 228 | 9 | 91 | 491 | 94 | 517 | 6.13e-88 | 279 |
Msa0528840 | MtrunA17_Chr1g0204141 | 38.005 | 421 | 236 | 10 | 83 | 492 | 74 | 480 | 2.71e-84 | 270 |
Msa0528840 | MtrunA17_Chr4g0043911 | 35.096 | 416 | 243 | 10 | 97 | 496 | 150 | 554 | 5.83e-82 | 265 |
Msa0528840 | MtrunA17_Chr5g0424241 | 36.650 | 412 | 231 | 10 | 98 | 489 | 158 | 559 | 7.17e-79 | 258 |
Msa0528840 | MtrunA17_Chr4g0075311 | 37.642 | 441 | 220 | 11 | 94 | 489 | 161 | 591 | 1.48e-78 | 257 |
Msa0528840 | MtrunA17_Chr2g0284071 | 35.892 | 443 | 231 | 10 | 91 | 490 | 209 | 641 | 4.63e-78 | 257 |
Msa0528840 | MtrunA17_Chr1g0160781 | 34.223 | 412 | 244 | 9 | 97 | 492 | 149 | 549 | 1.18e-76 | 251 |
Msa0528840 | MtrunA17_Chr3g0077321 | 35.507 | 414 | 232 | 11 | 97 | 490 | 147 | 545 | 1.55e-74 | 245 |
Msa0528840 | MtrunA17_Chr3g0087291 | 36.432 | 398 | 234 | 9 | 100 | 492 | 176 | 559 | 1.06e-71 | 238 |
Msa0528840 | MtrunA17_Chr4g0010511 | 36.409 | 401 | 236 | 8 | 100 | 495 | 236 | 622 | 6.52e-71 | 237 |
Msa0528840 | MtrunA17_Chr7g0240241 | 77.419 | 124 | 24 | 1 | 256 | 375 | 1 | 124 | 1.09e-60 | 195 |
Msa0528840 | MtrunA17_Chr4g0003561 | 33.957 | 374 | 221 | 9 | 90 | 457 | 68 | 421 | 9.32e-59 | 201 |
Msa0528840 | MtrunA17_Chr3g0127811 | 32.997 | 297 | 171 | 8 | 97 | 379 | 63 | 345 | 5.78e-42 | 156 |
Msa0528840 | MtrunA17_Chr1g0146501 | 32.686 | 309 | 180 | 8 | 94 | 379 | 82 | 385 | 9.20e-42 | 158 |
Msa0528840 | MtrunA17_Chr7g0220381 | 31.148 | 305 | 185 | 7 | 85 | 370 | 86 | 384 | 3.44e-39 | 151 |
Msa0528840 | MtrunA17_Chr4g0002361 | 26.225 | 347 | 196 | 12 | 97 | 427 | 86 | 388 | 8.87e-24 | 103 |
Msa0528840 | MtrunA17_Chr1g0172911 | 58.000 | 50 | 21 | 0 | 209 | 258 | 80 | 129 | 2.40e-12 | 64.3 |
Msa0528840 | MtrunA17_Chr1g0172911 | 47.761 | 67 | 11 | 1 | 95 | 137 | 19 | 85 | 1.37e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0528840 | AT1G14020.1 | 71.881 | 505 | 136 | 2 | 1 | 505 | 1 | 499 | 0.0 | 761 |
Msa0528840 | AT2G03280.1 | 69.528 | 466 | 130 | 4 | 24 | 488 | 26 | 480 | 0.0 | 687 |
Msa0528840 | AT2G03280.2 | 65.720 | 493 | 130 | 5 | 24 | 488 | 26 | 507 | 0.0 | 672 |
Msa0528840 | AT5G15740.1 | 58.030 | 467 | 194 | 2 | 23 | 488 | 33 | 498 | 0.0 | 581 |
Msa0528840 | AT3G02250.1 | 58.491 | 477 | 190 | 4 | 15 | 488 | 27 | 498 | 0.0 | 576 |
Msa0528840 | AT2G37980.1 | 46.453 | 437 | 227 | 5 | 73 | 507 | 202 | 633 | 1.36e-137 | 411 |
Msa0528840 | AT3G54100.1 | 46.065 | 432 | 216 | 7 | 73 | 497 | 198 | 619 | 1.21e-133 | 401 |
Msa0528840 | AT5G35570.1 | 47.407 | 405 | 206 | 5 | 96 | 498 | 250 | 649 | 2.18e-132 | 399 |
Msa0528840 | AT1G22460.1 | 45.370 | 432 | 216 | 6 | 76 | 490 | 130 | 558 | 2.54e-129 | 388 |
Msa0528840 | AT5G64600.1 | 46.778 | 419 | 200 | 8 | 87 | 489 | 103 | 514 | 1.78e-128 | 384 |
Msa0528840 | AT5G01100.1 | 47.132 | 401 | 204 | 5 | 97 | 493 | 216 | 612 | 2.95e-128 | 387 |
Msa0528840 | AT1G76270.1 | 44.584 | 397 | 204 | 7 | 100 | 494 | 109 | 491 | 1.99e-104 | 324 |
Msa0528840 | AT4G38390.1 | 43.500 | 400 | 212 | 7 | 97 | 494 | 123 | 510 | 2.03e-102 | 318 |
Msa0528840 | AT1G20550.1 | 42.157 | 408 | 220 | 7 | 100 | 505 | 112 | 505 | 6.59e-102 | 317 |
Msa0528840 | AT4G16650.2 | 43.521 | 409 | 207 | 10 | 89 | 490 | 113 | 504 | 3.36e-95 | 299 |
Msa0528840 | AT4G16650.1 | 43.521 | 409 | 207 | 10 | 89 | 490 | 113 | 504 | 3.36e-95 | 299 |
Msa0528840 | AT1G04910.1 | 36.853 | 464 | 259 | 10 | 50 | 506 | 57 | 493 | 7.60e-92 | 290 |
Msa0528840 | AT4G24530.1 | 37.674 | 430 | 219 | 9 | 97 | 490 | 101 | 517 | 9.79e-90 | 284 |
Msa0528840 | AT3G26370.1 | 38.974 | 390 | 218 | 7 | 90 | 464 | 152 | 536 | 3.38e-89 | 284 |
Msa0528840 | AT5G65470.1 | 35.581 | 430 | 226 | 9 | 99 | 490 | 87 | 503 | 1.57e-86 | 275 |
Msa0528840 | AT1G11990.1 | 39.173 | 411 | 222 | 10 | 98 | 491 | 191 | 590 | 2.18e-82 | 267 |
Msa0528840 | AT1G62330.1 | 34.862 | 436 | 232 | 8 | 98 | 489 | 222 | 649 | 2.79e-82 | 268 |
Msa0528840 | AT1G38065.1 | 36.427 | 431 | 238 | 11 | 79 | 489 | 24 | 438 | 5.81e-82 | 263 |
Msa0528840 | AT1G38065.2 | 37.046 | 413 | 230 | 10 | 97 | 489 | 26 | 428 | 6.69e-82 | 262 |
Msa0528840 | AT1G38131.1 | 37.046 | 413 | 230 | 10 | 97 | 489 | 155 | 557 | 1.74e-80 | 262 |
Msa0528840 | AT1G11990.2 | 36.161 | 448 | 221 | 10 | 98 | 491 | 176 | 612 | 1.84e-77 | 254 |
Msa0528840 | AT5G63390.1 | 38.000 | 400 | 228 | 9 | 100 | 493 | 167 | 552 | 1.94e-76 | 251 |
Msa0528840 | AT1G29200.4 | 37.931 | 435 | 219 | 11 | 97 | 490 | 70 | 494 | 2.67e-76 | 248 |
Msa0528840 | AT1G29200.1 | 37.931 | 435 | 219 | 11 | 97 | 490 | 70 | 494 | 2.67e-76 | 248 |
Msa0528840 | AT1G35510.1 | 35.012 | 417 | 240 | 10 | 92 | 490 | 154 | 557 | 3.98e-75 | 248 |
Msa0528840 | AT1G29200.2 | 37.931 | 435 | 219 | 11 | 97 | 490 | 186 | 610 | 4.94e-75 | 248 |
Msa0528840 | AT2G01480.1 | 36.314 | 369 | 213 | 7 | 97 | 449 | 154 | 516 | 1.11e-74 | 246 |
Msa0528840 | AT1G14970.3 | 34.140 | 413 | 245 | 10 | 97 | 493 | 9 | 410 | 1.36e-74 | 242 |
Msa0528840 | AT1G14970.2 | 34.140 | 413 | 245 | 10 | 97 | 493 | 35 | 436 | 2.53e-74 | 242 |
Msa0528840 | AT2G01480.2 | 36.695 | 357 | 207 | 6 | 97 | 437 | 154 | 507 | 2.97e-74 | 244 |
Msa0528840 | AT1G29200.3 | 37.762 | 429 | 216 | 11 | 103 | 490 | 2 | 420 | 3.92e-74 | 241 |
Msa0528840 | AT1G14970.1 | 34.140 | 413 | 245 | 10 | 97 | 493 | 155 | 556 | 3.06e-73 | 242 |
Msa0528840 | AT2G44500.1 | 37.626 | 396 | 227 | 10 | 100 | 489 | 180 | 561 | 6.31e-73 | 242 |
Msa0528840 | AT3G07900.1 | 34.634 | 410 | 247 | 8 | 84 | 489 | 180 | 572 | 5.87e-69 | 231 |
Msa0528840 | AT1G52630.1 | 32.708 | 373 | 224 | 10 | 90 | 458 | 70 | 419 | 5.19e-59 | 201 |
Msa0528840 | AT3G03810.2 | 35.855 | 304 | 178 | 7 | 91 | 379 | 83 | 384 | 8.56e-50 | 181 |
Msa0528840 | AT3G03810.1 | 35.855 | 304 | 178 | 7 | 91 | 379 | 83 | 384 | 8.56e-50 | 181 |
Msa0528840 | AT1G52630.2 | 31.054 | 351 | 218 | 9 | 112 | 458 | 1 | 331 | 1.09e-49 | 174 |
Msa0528840 | AT3G26370.2 | 39.171 | 217 | 119 | 5 | 90 | 296 | 152 | 365 | 1.11e-45 | 164 |
Msa0528840 | AT3G30300.2 | 33.333 | 306 | 180 | 7 | 91 | 379 | 97 | 395 | 2.93e-43 | 163 |
Msa0528840 | AT3G30300.1 | 33.333 | 306 | 180 | 7 | 91 | 379 | 97 | 395 | 2.93e-43 | 163 |
Msa0528840 | AT2G44500.2 | 39.914 | 233 | 127 | 7 | 100 | 326 | 180 | 405 | 4.56e-39 | 147 |
Msa0528840 | AT1G51630.1 | 24.845 | 322 | 192 | 9 | 96 | 406 | 90 | 372 | 7.34e-19 | 89.4 |
Find 264 sgRNAs with CRISPR-Local
Find 477 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTTGTTGCAGTGTTTA+AGG | 0.136425 | 4_1:-1809067 | Msa0528840:intron |
TTGATCATCGTCCCCTTTAA+AGG | 0.157833 | 4_1:-1804579 | Msa0528840:three_prime_UTR |
TTATACAACTATACTGAATT+TGG | 0.182459 | 4_1:+1804800 | Msa0528830:three_prime_UTR |
CAAATTCTGTGGACACAATT+TGG | 0.185076 | 4_1:-1809191 | Msa0528840:five_prime_UTR |
CCATCTGTGATGAATGATTT+TGG | 0.203102 | 4_1:+1805521 | None:intergenic |
AAAGTTCTGCTGCAACTTTC+TGG | 0.203760 | 4_1:-1803449 | Msa0528840:three_prime_UTR |
ATTGCAGCCGGTGAGATTTA+TGG | 0.227102 | 4_1:-1805895 | Msa0528840:CDS |
TGGCATTCCAATTTCTTTAC+TGG | 0.232585 | 4_1:-1808724 | Msa0528840:CDS |
TTGCAGATTTGTGTTAATTT+TGG | 0.236857 | 4_1:-1808971 | Msa0528840:intron |
GGGTACCGATGCTTTCTTAT+TGG | 0.244903 | 4_1:+1803831 | Msa0528830:CDS |
TCAGATATGCATTCCCTTCA+TGG | 0.261168 | 4_1:-1806035 | Msa0528840:intron |
GATGGCTGCTTTGGATTTCA+TGG | 0.269401 | 4_1:-1805503 | Msa0528840:CDS |
TGCATTCAATCAACCTTTAA+AGG | 0.269412 | 4_1:+1804566 | Msa0528830:three_prime_UTR |
AGATTGCTCTTGCATACTTA+TGG | 0.269547 | 4_1:+1804978 | Msa0528830:three_prime_UTR |
AGTAAATCCAGTAAAGAAAT+TGG | 0.278555 | 4_1:+1808717 | None:intergenic |
ACCAGCTTCAAATTCAATTC+TGG | 0.279415 | 4_1:-1809131 | Msa0528840:five_prime_UTR |
CACCCCTCAAATTGAGAATC+TGG | 0.293410 | 4_1:-1806432 | Msa0528840:CDS |
TGCTTTGGATTTCATGGTTT+CGG | 0.294885 | 4_1:-1805497 | Msa0528840:CDS |
CAAAATACTTCTAATCTTGC+AGG | 0.301113 | 4_1:+1804435 | Msa0528830:exon |
ACCAGCAAGGGCGGATTTGC+AGG | 0.304466 | 4_1:-1803944 | Msa0528840:three_prime_UTR |
TCCTTTCTTTCCATTCTCAT+TGG | 0.305081 | 4_1:-1809301 | Msa0528840:five_prime_UTR |
TTCATCACAGATGGCTGCTT+TGG | 0.305983 | 4_1:-1805512 | Msa0528840:CDS |
CCAGCTTCAAATTCAATTCT+GGG | 0.308049 | 4_1:-1809130 | Msa0528840:five_prime_UTR |
TTCTAAGAGTGTCCTGCAAT+GGG | 0.310538 | 4_1:-1807428 | Msa0528840:CDS |
TTGCTTGATATGCATCAAAA+TGG | 0.313563 | 4_1:-1805242 | Msa0528840:CDS |
CATCTTTGCAAGCCTCTATA+TGG | 0.317158 | 4_1:+1804855 | Msa0528830:three_prime_UTR |
CTTTCTGGCTCTGATACATT+TGG | 0.328912 | 4_1:-1803434 | Msa0528840:three_prime_UTR |
CTAAGTTTCTGTAGATCAAT+TGG | 0.331955 | 4_1:+1806485 | None:intergenic |
AAGGATTTCTTATCAAGTTC+CGG | 0.337356 | 4_1:+1807245 | None:intergenic |
GCTTTCTCAGGTTGTACTCT+TGG | 0.343079 | 4_1:-1806332 | Msa0528840:CDS |
GCAGAGTTGGCTCTGGACTA+TGG | 0.343115 | 4_1:+1803616 | Msa0528830:CDS |
ATAGAAATTTCAAATAATCT+TGG | 0.344130 | 4_1:+1809627 | None:intergenic |
ATGCAAGAGCAATCTGAAAA+TGG | 0.345318 | 4_1:-1804970 | Msa0528840:three_prime_UTR |
AACTTGATAAGAAATCCTTT+TGG | 0.353716 | 4_1:-1807241 | Msa0528840:CDS |
GCCTGCAAATCCGCCCTTGC+TGG | 0.360260 | 4_1:+1803943 | Msa0528830:CDS |
TAGAAATAATCCTCCTCCTT+TGG | 0.360561 | 4_1:+1805125 | Msa0528830:three_prime_UTR |
TAGCGCTCATGCAGGTATTC+CGG | 0.363730 | 4_1:-1805308 | Msa0528840:intron |
AACAACAGTATGTCATTAAC+TGG | 0.364991 | 4_1:-1804469 | Msa0528840:three_prime_UTR |
CATTGTGCTGTGGACATGTT+TGG | 0.367522 | 4_1:-1808773 | Msa0528840:CDS |
CACTGTTCAGAGACTCCATC+TGG | 0.373117 | 4_1:+1803857 | Msa0528830:CDS |
GCATTCAATCAACCTTTAAA+GGG | 0.374835 | 4_1:+1804567 | Msa0528830:three_prime_UTR |
GCAAGCAAGTTCTTCATCAT+TGG | 0.385250 | 4_1:+1809666 | None:intergenic |
TGCTCTTGCATACTTATGGT+TGG | 0.387006 | 4_1:+1804982 | Msa0528830:three_prime_UTR |
ACCTTTATTCCTACCTATGA+TGG | 0.388352 | 4_1:-1805463 | Msa0528840:CDS |
GATCTTCGAGCAGAAAGAAT+TGG | 0.388839 | 4_1:+1804325 | Msa0528830:CDS |
AGCTAACAGGAGGCATCTCC+AGG | 0.388940 | 4_1:+1807010 | None:intergenic |
GCTCTTGCATACTTATGGTT+GGG | 0.392646 | 4_1:+1804983 | Msa0528830:three_prime_UTR |
ATGGACATGCTGGCTTTCTC+AGG | 0.395187 | 4_1:-1806344 | Msa0528840:CDS |
TGCCCCAGATTCTCAATTTG+AGG | 0.396144 | 4_1:+1806428 | None:intergenic |
TCACATGCGTTCACCGTAGA+AGG | 0.396385 | 4_1:-1804543 | Msa0528840:three_prime_UTR |
TTCTGTCAAGGCAGGAGAAC+AGG | 0.398267 | 4_1:+1803224 | Msa0528830:CDS |
GAACCTCACATTGGTTGTTC+CGG | 0.404001 | 4_1:-1807264 | Msa0528840:CDS |
CCATCTTATTGGACCGGAAA+AGG | 0.405140 | 4_1:-1805274 | Msa0528840:CDS |
ACAAGCTGCAGGCATGTAAT+GGG | 0.405918 | 4_1:-1804630 | Msa0528840:three_prime_UTR |
CTCAAGGATCTTGGACTTTG+CGG | 0.406199 | 4_1:+1804383 | Msa0528830:CDS |
GAAAGGAGGCTCAAGGATCT+TGG | 0.407166 | 4_1:+1804374 | Msa0528830:CDS |
TATGCATATCGATCTGCATT+TGG | 0.408825 | 4_1:-1803649 | Msa0528840:three_prime_UTR |
TTCTCCTGCCTTGACAGAAA+GGG | 0.411526 | 4_1:-1803220 | Msa0528840:three_prime_UTR |
TACAAGCTGCAGGCATGTAA+TGG | 0.411895 | 4_1:-1804631 | Msa0528840:three_prime_UTR |
CTGAAAATGGCTCCTTCCCT+CGG | 0.419876 | 4_1:-1804957 | Msa0528840:three_prime_UTR |
AGTGCTACTAATCTCAGATA+TGG | 0.428804 | 4_1:-1803805 | Msa0528840:three_prime_UTR |
GCCTTGGTTATGCAAGCCTT+AGG | 0.432969 | 4_1:-1805943 | Msa0528840:CDS |
CCCATCATAGGTAGGAATAA+AGG | 0.436770 | 4_1:+1805462 | None:intergenic |
GTGCATGGATTCAAAGGTTT+GGG | 0.437538 | 4_1:+1809481 | None:intergenic |
GCAGGAAATTATACTAGTAA+TGG | 0.439060 | 4_1:-1807453 | Msa0528840:intron |
TTTCCTTGATATGGAAGAGC+TGG | 0.441012 | 4_1:-1803391 | Msa0528840:three_prime_UTR |
TTTCTTGATAATATTCCAAC+TGG | 0.444121 | 4_1:-1804355 | Msa0528840:three_prime_UTR |
TTTCTAAGAGTGTCCTGCAA+TGG | 0.444915 | 4_1:-1807429 | Msa0528840:CDS |
ATACCTACGGTCTGCCCAAA+AGG | 0.445579 | 4_1:+1807226 | None:intergenic |
AGGAAATAGTGTCTGAAGAA+AGG | 0.445827 | 4_1:-1806005 | Msa0528840:CDS |
GATTTCATGGTTTCGGTAGC+CGG | 0.450519 | 4_1:-1805490 | Msa0528840:CDS |
GGAACTGCTGTAACTCATCA+AGG | 0.452325 | 4_1:+1805542 | None:intergenic |
TGTGCATGGATTCAAAGGTT+TGG | 0.454873 | 4_1:+1809480 | None:intergenic |
TGAAAAGTGTGTGAAGGTTA+TGG | 0.457566 | 4_1:-1808945 | Msa0528840:five_prime_UTR |
AAAAGTCCATCTTATTGGAC+CGG | 0.458534 | 4_1:-1805280 | Msa0528840:CDS |
ATAGTTTATTACCTGTTCAA+TGG | 0.458942 | 4_1:-1803977 | Msa0528840:intron |
TGAAGTGTGTGACAAAGAAA+TGG | 0.461488 | 4_1:-1808908 | Msa0528840:exon |
GAAGTGCACCACCTTGTGTT+TGG | 0.463947 | 4_1:+1806544 | None:intergenic |
AAGCTGCTCCTTTGATTCCA+AGG | 0.468221 | 4_1:-1808834 | Msa0528840:CDS |
GTTCTCCTGCCTTGACAGAA+AGG | 0.468467 | 4_1:-1803221 | Msa0528840:three_prime_UTR |
CTTACTTGAGTAGAGTTATG+AGG | 0.468781 | 4_1:+1805047 | Msa0528830:three_prime_UTR |
TTGGGAGACCATTATTTGCT+AGG | 0.469220 | 4_1:+1806504 | None:intergenic |
GCCCCAGATTCTCAATTTGA+GGG | 0.469715 | 4_1:+1806429 | None:intergenic |
TTATTCTGGCAGTGGCTTCG+AGG | 0.470272 | 4_1:-1807133 | Msa0528840:intron |
GAATAAACCAAACACGAAAA+CGG | 0.470528 | 4_1:+1808809 | None:intergenic |
TCCAATGAGAATGGAAAGAA+AGG | 0.471672 | 4_1:+1809300 | None:intergenic |
CTAACTTGCAGGAAGTAGAA+TGG | 0.473374 | 4_1:+1808630 | None:intergenic |
TAAGTTTCTGTAGATCAATT+GGG | 0.475386 | 4_1:+1806486 | None:intergenic |
TGGAGATGCCTCCTGTTAGC+TGG | 0.475776 | 4_1:-1807008 | Msa0528840:CDS |
TTGTGACTGTGAGTGAACTA+TGG | 0.476628 | 4_1:-1808744 | Msa0528840:CDS |
AGATATGGAAGCATCCCTTC+TGG | 0.477120 | 4_1:-1803790 | Msa0528840:three_prime_UTR |
CTCCTCATTATCACGGCTCA+TGG | 0.477204 | 4_1:-1803896 | Msa0528840:three_prime_UTR |
AAGCAATGCAGAGTTGGCTC+TGG | 0.478444 | 4_1:+1803609 | Msa0528830:CDS |
TAACTTGCAGGAAGTAGAAT+GGG | 0.479064 | 4_1:+1808631 | None:intergenic |
CAAACACGAAAACGGCTCCT+TGG | 0.481546 | 4_1:+1808817 | None:intergenic |
CTCCATCTGGGGTCATCTTG+AGG | 0.481584 | 4_1:+1803870 | Msa0528830:CDS |
GAAATATATGTTCCATATAG+AGG | 0.482623 | 4_1:-1804867 | Msa0528840:three_prime_UTR |
AATTGTGTGCATGGATTCAA+AGG | 0.483270 | 4_1:+1809475 | None:intergenic |
ACCCCTCAAATTGAGAATCT+GGG | 0.484445 | 4_1:-1806431 | Msa0528840:CDS |
AAGAGGCAAATCTAGATTCA+AGG | 0.484970 | 4_1:+1804243 | Msa0528830:CDS |
GAGGGGTGAATTTAAGTGCC+TGG | 0.487600 | 4_1:+1806447 | None:intergenic |
GTCAAATGAAAAGTATTACT+TGG | 0.489028 | 4_1:-1806986 | Msa0528840:CDS |
CTCAGATGCAATGCCACAAA+AGG | 0.490594 | 4_1:+1806374 | None:intergenic |
ACAACTATACTGAATTTGGT+GGG | 0.497845 | 4_1:+1804804 | Msa0528830:three_prime_UTR |
GGGATTACCTATTTGCCCTA+AGG | 0.498091 | 4_1:+1803193 | Msa0528830:CDS |
AAACAAAAGCAATGCAGAGT+TGG | 0.498255 | 4_1:+1803603 | Msa0528830:CDS |
ATTTCCTTCTCTCTCCATGA+AGG | 0.500444 | 4_1:+1806021 | None:intergenic |
AGGTGAGGATCCAATGAGAA+TGG | 0.501136 | 4_1:+1809291 | None:intergenic |
GTAGATGAATTGAGAGATCC+AGG | 0.502785 | 4_1:+1809503 | None:intergenic |
GATGCACGCCTAGCAAATAA+TGG | 0.504541 | 4_1:-1806512 | Msa0528840:CDS |
CCCAGAATTGAATTTGAAGC+TGG | 0.505271 | 4_1:+1809130 | None:intergenic |
ATAACCAAGGCAGTCTCCTC+CGG | 0.505709 | 4_1:+1805955 | None:intergenic |
CAATTGATCTACAGAAACTT+AGG | 0.505738 | 4_1:-1806484 | Msa0528840:CDS |
ATGGAAAGAAAGGATCAAAT+CGG | 0.506036 | 4_1:+1809310 | None:intergenic |
ACAGGTTCACGAAAAGAGAA+TGG | 0.506682 | 4_1:-1805183 | Msa0528840:CDS |
CATGCCTGCAGCTTGTAAAG+TGG | 0.508006 | 4_1:+1804637 | Msa0528830:three_prime_UTR |
CCGAGGATCTCAAGCGGATG+AGG | 0.509548 | 4_1:-1806292 | Msa0528840:intron |
TAGCCAGCTCTTCCATATCA+AGG | 0.509727 | 4_1:+1803388 | Msa0528830:intron |
TATGCATACACCTTGACACT+GGG | 0.512341 | 4_1:+1803664 | Msa0528830:CDS |
GTCTGAAGAAAGGAGATCCC+AGG | 0.512801 | 4_1:-1805995 | Msa0528840:CDS |
TACAACTATACTGAATTTGG+TGG | 0.513828 | 4_1:+1804803 | Msa0528830:three_prime_UTR |
GCAGTCTCCTCCGGTGTCAA+AGG | 0.517244 | 4_1:+1805964 | None:intergenic |
GTGTCAAAGGACATAGACCC+TGG | 0.517880 | 4_1:+1805977 | None:intergenic |
TGGGTTGTAATAATTGTGGC+CGG | 0.524912 | 4_1:-1804611 | Msa0528840:three_prime_UTR |
CACATTCATAACTGTGCAGT+TGG | 0.525016 | 4_1:+1803545 | Msa0528830:intron |
GACACCGGAGGAGACTGCCT+TGG | 0.525025 | 4_1:-1805959 | Msa0528840:CDS |
GCATCTACAAACTCATTCCA+TGG | 0.525256 | 4_1:+1805212 | Msa0528830:three_prime_UTR |
GGAAGCATCCCTTCTGGAAG+AGG | 0.525978 | 4_1:-1803784 | Msa0528840:three_prime_UTR |
GCCCATGAGCCGTGATAATG+AGG | 0.527832 | 4_1:+1803894 | Msa0528830:CDS |
TGAAAATGGCTCCTTCCCTC+GGG | 0.528010 | 4_1:-1804956 | Msa0528840:three_prime_UTR |
TTGAAGAGCTTCAAATTCTG+TGG | 0.528024 | 4_1:-1809202 | Msa0528840:five_prime_UTR |
ATCTGAGATTAGTAGCACTA+GGG | 0.531413 | 4_1:+1803809 | Msa0528830:CDS |
CTAAGAGTGTCCTGCAATGG+GGG | 0.532495 | 4_1:-1807426 | Msa0528840:CDS |
TCTCCTGCCTTGACAGAAAG+GGG | 0.533728 | 4_1:-1803219 | Msa0528840:three_prime_UTR |
CCTCATCCGCTTGAGATCCT+CGG | 0.534275 | 4_1:+1806292 | None:intergenic |
GTTTGTAGATGCTGTGCGAC+AGG | 0.534296 | 4_1:-1805201 | Msa0528840:CDS |
CTTGGACTTTGCGGTGAAAG+TGG | 0.534968 | 4_1:+1804392 | Msa0528830:CDS |
CCTTTATTCCTACCTATGAT+GGG | 0.535492 | 4_1:-1805462 | Msa0528840:CDS |
AGTTGGAATATTATCAAGAA+AGG | 0.536592 | 4_1:+1804357 | Msa0528830:CDS |
ATCGCAAATGTAGCCTTCTA+CGG | 0.536666 | 4_1:+1804530 | Msa0528830:three_prime_UTR |
AGAATTGGAACTAGACCAGT+TGG | 0.537321 | 4_1:+1804340 | Msa0528830:CDS |
TGAAAAGTATTACTTGGAGC+AGG | 0.539964 | 4_1:-1806980 | Msa0528840:intron |
CCAAAATCATTCATCACAGA+TGG | 0.542359 | 4_1:-1805521 | Msa0528840:CDS |
CTTCAAATTCAATTCTGGGT+CGG | 0.542473 | 4_1:-1809126 | Msa0528840:five_prime_UTR |
TCCTCATTATCACGGCTCAT+GGG | 0.543503 | 4_1:-1803895 | Msa0528840:three_prime_UTR |
TGTCTCCCGGTCAAAACCTA+AGG | 0.543702 | 4_1:+1805927 | None:intergenic |
AACTATACTGAATTTGGTGG+GGG | 0.544382 | 4_1:+1804806 | Msa0528830:three_prime_UTR |
TATGAAGTCAAAGGACCAGC+TGG | 0.544591 | 4_1:+1803159 | Msa0528830:CDS |
GAATTTGAAGCTGGTGAATG+AGG | 0.546976 | 4_1:+1809139 | None:intergenic |
CTACAAACTCATTCCATGGA+AGG | 0.551044 | 4_1:+1805216 | Msa0528830:three_prime_UTR |
GCAGGATCGCAAGCTGAAAG+AGG | 0.551716 | 4_1:+1804226 | Msa0528830:intron |
TTGCGCCTCAGAATACAGCT+TGG | 0.551987 | 4_1:-1803477 | Msa0528840:three_prime_UTR |
CACCTCAAGATGACCCCAGA+TGG | 0.552036 | 4_1:-1803872 | Msa0528840:three_prime_UTR |
AAACGGCTCCTTGGAATCAA+AGG | 0.552528 | 4_1:+1808826 | None:intergenic |
TCCCAAGAGAAAAGACCAGC+TGG | 0.553440 | 4_1:-1803174 | Msa0528840:three_prime_UTR |
CCCCAGATTCTCAATTTGAG+GGG | 0.555415 | 4_1:+1806430 | None:intergenic |
GAGATATGAGATGGACATGC+TGG | 0.557518 | 4_1:-1806354 | Msa0528840:CDS |
ACTGTTCAGAGACTCCATCT+GGG | 0.560536 | 4_1:+1803858 | Msa0528830:CDS |
CAGGTTCACGAAAAGAGAAT+GGG | 0.560835 | 4_1:-1805182 | Msa0528840:CDS |
ATCAAAATGGAACCCTTCCA+TGG | 0.561331 | 4_1:-1805229 | Msa0528840:CDS |
CAATGTAAATCTGTGTCTCC+CGG | 0.564211 | 4_1:+1805914 | None:intergenic |
TTTCCTTCTCTCTCCATGAA+GGG | 0.565721 | 4_1:+1806022 | None:intergenic |
CCCTCATGAGTGCCTTTGTG+AGG | 0.571802 | 4_1:-1805096 | Msa0528840:CDS |
TCTAAGAGTGTCCTGCAATG+GGG | 0.572836 | 4_1:-1807427 | Msa0528840:CDS |
CAACTATACTGAATTTGGTG+GGG | 0.573463 | 4_1:+1804805 | Msa0528830:three_prime_UTR |
ACACAGATTTACATTGCAGC+CGG | 0.575721 | 4_1:-1805907 | Msa0528840:CDS |
GGGTCTATGTCCTTTGACAC+CGG | 0.576261 | 4_1:-1805974 | Msa0528840:CDS |
ACAATGATTCGACGATAAGT+CGG | 0.577569 | 4_1:+1805155 | Msa0528830:three_prime_UTR |
TATAACCGCCCTCTTCCAGA+AGG | 0.578293 | 4_1:+1803775 | Msa0528830:CDS |
CTCTAAGAACTTATGCCCGA+GGG | 0.578429 | 4_1:+1804941 | Msa0528830:three_prime_UTR |
GTGACATGGTGACAATTGCT+CGG | 0.579350 | 4_1:-1807292 | Msa0528840:CDS |
TGGGAACATGGCAAAACTTG+TGG | 0.580054 | 4_1:-1805443 | Msa0528840:CDS |
ATGATCATCTGTAGTCACTC+TGG | 0.581191 | 4_1:-1803133 | Msa0528840:three_prime_UTR |
GATCATGCTTATGAAGTCAA+AGG | 0.581508 | 4_1:+1803150 | Msa0528830:CDS |
TAGGTGCCGTGTTAATTACC+AGG | 0.582283 | 4_1:-1806465 | Msa0528840:CDS |
AGATCTCATCAATTTGCCGC+AGG | 0.582417 | 4_1:-1804307 | Msa0528840:three_prime_UTR |
GATTCAGATACTTCGCGAGA+GGG | 0.583952 | 4_1:-1806399 | Msa0528840:CDS |
TATCTGAGATTAGTAGCACT+AGG | 0.584493 | 4_1:+1803808 | Msa0528830:CDS |
GTTCATTCTCTATGTAATCA+CGG | 0.584697 | 4_1:-1804732 | Msa0528840:three_prime_UTR |
ATATGCATACACCTTGACAC+TGG | 0.586569 | 4_1:+1803663 | Msa0528830:CDS |
TGTAGACAAACCAAAGGAGG+AGG | 0.587728 | 4_1:-1805135 | Msa0528840:CDS |
CTCGGATATCCCCAGTGTCA+AGG | 0.587901 | 4_1:-1803674 | Msa0528840:three_prime_UTR |
TACAAACTCATTCCATGGAA+GGG | 0.592326 | 4_1:+1805217 | Msa0528830:three_prime_UTR |
AATTTGAAGCTGGTGAATGA+GGG | 0.594717 | 4_1:+1809140 | None:intergenic |
GGTAGGAATAAAGGTGTCAC+CGG | 0.594798 | 4_1:+1805471 | None:intergenic |
ACAAAGGCACTCATGAGGGT+TGG | 0.596296 | 4_1:+1805100 | Msa0528830:three_prime_UTR |
CCCTCACAAAGGCACTCATG+AGG | 0.597403 | 4_1:+1805095 | Msa0528830:three_prime_UTR |
TAGCAGTCGGAATAAGAGAA+GGG | 0.598131 | 4_1:+1804273 | Msa0528830:CDS |
AAGAACTTATGCCCGAGGGA+AGG | 0.599553 | 4_1:+1804945 | Msa0528830:three_prime_UTR |
GCAATCCAAGCTGTATTCTG+AGG | 0.600078 | 4_1:+1803472 | Msa0528830:intron |
GTAGACGTTGCTGAGACCAA+TGG | 0.600772 | 4_1:+1803721 | Msa0528830:CDS |
TCAAGGCTTGCAATAGCAGT+CGG | 0.600784 | 4_1:+1804260 | Msa0528830:CDS |
CACACTTTGTTCCCTCACAA+AGG | 0.600880 | 4_1:+1805084 | Msa0528830:three_prime_UTR |
AACTTGTGGAAGGCCACCGC+AGG | 0.602466 | 4_1:-1805429 | Msa0528840:intron |
CCTCACAAAGGCACTCATGA+GGG | 0.602588 | 4_1:+1805096 | Msa0528830:three_prime_UTR |
TGGAATATTATCAAGAAAGG+AGG | 0.602703 | 4_1:+1804360 | Msa0528830:CDS |
GCCATGTTCCCATCATAGGT+AGG | 0.602990 | 4_1:+1805454 | None:intergenic |
CCCCTCAAATTGAGAATCTG+GGG | 0.605300 | 4_1:-1806430 | Msa0528840:CDS |
CTCCTGCCTTGACAGAAAGG+GGG | 0.606795 | 4_1:-1803218 | Msa0528840:three_prime_UTR |
ACAACTCAACGGCCTCCTCA+AGG | 0.607711 | 4_1:-1808679 | Msa0528840:CDS |
ATTCTGTGGACACAATTTGG+TGG | 0.607748 | 4_1:-1809188 | Msa0528840:five_prime_UTR |
ATAGCAGTCGGAATAAGAGA+AGG | 0.608578 | 4_1:+1804272 | Msa0528830:CDS |
AACATGGCAAAACTTGTGGA+AGG | 0.609196 | 4_1:-1805439 | Msa0528840:CDS |
CCTCATGAGTGCCTTTGTGA+GGG | 0.609759 | 4_1:-1805095 | Msa0528840:CDS |
TTATCAAGAAAGGAGGCTCA+AGG | 0.609776 | 4_1:+1804367 | Msa0528830:CDS |
TCCTACCTATGATGGGAACA+TGG | 0.610654 | 4_1:-1805455 | Msa0528840:CDS |
TCTCTAAGAACTTATGCCCG+AGG | 0.611187 | 4_1:+1804940 | Msa0528830:three_prime_UTR |
GGGTTGTAATAATTGTGGCC+GGG | 0.612240 | 4_1:-1804610 | Msa0528840:three_prime_UTR |
TTTGAATCAAATGCGTGCAG+CGG | 0.612731 | 4_1:-1807403 | Msa0528840:intron |
ACAAAGTGTGATGATTTGCT+AGG | 0.614058 | 4_1:-1805071 | Msa0528840:CDS |
AATGGAAGTTAGATCATCAG+AGG | 0.614061 | 4_1:-1808890 | Msa0528840:CDS |
GGCATTTCAGATTTGTGACA+TGG | 0.614628 | 4_1:-1807306 | Msa0528840:intron |
CATTGTAGACAAACCAAAGG+AGG | 0.615228 | 4_1:-1805138 | Msa0528840:CDS |
TTCACCACCATAAATCTCAC+CGG | 0.615230 | 4_1:+1805888 | None:intergenic |
ACTGTTGTTTGTATCTCTTG+AGG | 0.620279 | 4_1:+1804483 | Msa0528830:three_prime_UTR |
GGTGAAAGTGGTGATGTCCT+TGG | 0.620946 | 4_1:+1804404 | Msa0528830:CDS |
TCATTTGACCAGCTAACAGG+AGG | 0.621119 | 4_1:+1807000 | None:intergenic |
CATTCAATCAACCTTTAAAG+GGG | 0.622188 | 4_1:+1804568 | Msa0528830:three_prime_UTR |
GAAGCTGGTGAATGAGGGTG+AGG | 0.622694 | 4_1:+1809145 | None:intergenic |
AGGAATTGAGGAACAAGGTG+AGG | 0.623145 | 4_1:+1809276 | None:intergenic |
ACCTAAGGCTTGCATAACCA+AGG | 0.627242 | 4_1:+1805942 | None:intergenic |
GGTTGTGTGATAACCAGCAA+GGG | 0.628035 | 4_1:-1803956 | Msa0528840:three_prime_UTR |
TGGTTGTGTGATAACCAGCA+AGG | 0.629031 | 4_1:-1803957 | Msa0528840:three_prime_UTR |
GTATATATCACACAACTCAA+CGG | 0.629814 | 4_1:-1808690 | Msa0528840:CDS |
GAAAAGTGGATACTCGACCC+TGG | 0.636896 | 4_1:-1807028 | Msa0528840:CDS |
AGCAGTCGGAATAAGAGAAG+GGG | 0.636940 | 4_1:+1804274 | Msa0528830:CDS |
AATCATTGTAGACAAACCAA+AGG | 0.637419 | 4_1:-1805141 | Msa0528840:CDS |
ATTCAGATACTTCGCGAGAG+GGG | 0.637675 | 4_1:-1806398 | Msa0528840:CDS |
GAACTGCTGTAACTCATCAA+GGG | 0.638982 | 4_1:+1805543 | None:intergenic |
GAAGCATCCCTTCTGGAAGA+GGG | 0.639736 | 4_1:-1803783 | Msa0528840:three_prime_UTR |
ATACTAGCTCCTCATTATCA+CGG | 0.640006 | 4_1:-1803903 | Msa0528840:three_prime_UTR |
ATATAAGGAATTGAGGAACA+AGG | 0.641155 | 4_1:+1809271 | None:intergenic |
TCTGAAGAAAGGAGATCCCA+GGG | 0.644505 | 4_1:-1805994 | Msa0528840:CDS |
TGTCAAAGGACATAGACCCT+GGG | 0.644623 | 4_1:+1805978 | None:intergenic |
TTTGTTCAACCATTGTGCTG+TGG | 0.645471 | 4_1:-1808783 | Msa0528840:CDS |
TGGTTGTGAAAAGTGTGTGA+AGG | 0.647524 | 4_1:-1808951 | Msa0528840:five_prime_UTR |
CTGTAGTCACTCTGGCACTG+TGG | 0.648083 | 4_1:-1803125 | Msa0528840:three_prime_UTR |
TGATTCAGATACTTCGCGAG+AGG | 0.649037 | 4_1:-1806400 | Msa0528840:CDS |
ATTCCCTTCATGGAGAGAGA+AGG | 0.650807 | 4_1:-1806025 | Msa0528840:CDS |
TGAAGGTTATGGTGATGAAG+TGG | 0.651256 | 4_1:-1808934 | Msa0528840:five_prime_UTR |
CTTGCAGGAAGTAGAATGGG+AGG | 0.651294 | 4_1:+1808634 | None:intergenic |
GTAATGGGTTGTAATAATTG+TGG | 0.651529 | 4_1:-1804615 | Msa0528840:three_prime_UTR |
ATAACCGCCCTCTTCCAGAA+GGG | 0.651691 | 4_1:+1803776 | Msa0528830:CDS |
TGATTCCAATAAGAAAGCAT+CGG | 0.654051 | 4_1:-1803836 | Msa0528840:three_prime_UTR |
AATATAACATCTCCTTGAGG+AGG | 0.657753 | 4_1:+1808667 | None:intergenic |
TAAGTGCCTGGTAATTAACA+CGG | 0.657828 | 4_1:+1806459 | None:intergenic |
ATGGAAGTTAGATCATCAGA+GGG | 0.666260 | 4_1:-1808889 | Msa0528840:CDS |
TTGCACTAATGAAGAAGCCG+AGG | 0.669813 | 4_1:-1806309 | Msa0528840:CDS |
TCTGAGATTAGTAGCACTAG+GGG | 0.673869 | 4_1:+1803810 | Msa0528830:CDS |
CTGTTCAGAGACTCCATCTG+GGG | 0.675062 | 4_1:+1803859 | Msa0528830:CDS |
CAAACATGTCCACAGCACAA+TGG | 0.677892 | 4_1:+1808774 | None:intergenic |
TGTGTGATAACCAGCAAGGG+CGG | 0.678647 | 4_1:-1803953 | Msa0528840:three_prime_UTR |
AAGAAGCCGAGGATCTCAAG+CGG | 0.678663 | 4_1:-1806298 | Msa0528840:CDS |
GCTAACAGGAGGCATCTCCA+GGG | 0.682429 | 4_1:+1807011 | None:intergenic |
ATTGCATCTGAGATATGAGA+TGG | 0.683390 | 4_1:-1806363 | Msa0528840:CDS |
ATGCATACACCTTGACACTG+GGG | 0.698561 | 4_1:+1803665 | Msa0528830:CDS |
TCTATGTCCTTTGACACCGG+AGG | 0.698582 | 4_1:-1805971 | Msa0528840:CDS |
GCAAATATAACATCTCCTTG+AGG | 0.698776 | 4_1:+1808664 | None:intergenic |
GTTCCGGAACAACCAATGTG+AGG | 0.701296 | 4_1:+1807261 | None:intergenic |
GCATCCCTTCTGGAAGAGGG+CGG | 0.703925 | 4_1:-1803780 | Msa0528840:three_prime_UTR |
GCAGCCGGTGAGATTTATGG+TGG | 0.721413 | 4_1:-1805892 | Msa0528840:CDS |
GAGTAAATAGATACCTGCGG+TGG | 0.724695 | 4_1:+1805416 | None:intergenic |
CTGAGATTAGTAGCACTAGG+GGG | 0.740933 | 4_1:+1803811 | Msa0528830:CDS |
TGAGGAGCTAGTATGCAAAG+CGG | 0.776917 | 4_1:+1803912 | Msa0528830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATATTTTAAAAGACTTTAA+CGG | - | chr4_1:1803252-1803271 | Msa0528840:intron | 10.0% |
!!! | TTTTAAGAAAGAAAAATATA+AGG | + | chr4_1:1803552-1803571 | Msa0528830:intron | 10.0% |
!!! | AATAAGATATATATTTCTTT+TGG | + | chr4_1:1807478-1807497 | None:intergenic | 10.0% |
!! | ATAGAAATTTCAAATAATCT+TGG | + | chr4_1:1803181-1803200 | Msa0528830:CDS | 15.0% |
!! | AAAAAAAGAGATTACAAAAT+GGG | + | chr4_1:1803220-1803239 | Msa0528830:CDS | 15.0% |
!! | ATTTAGCAATAATAGTAATA+TGG | - | chr4_1:1804323-1804342 | Msa0528840:three_prime_UTR | 15.0% |
!!! | TTAACTTTAAAAAGTAACTA+TGG | + | chr4_1:1804437-1804456 | Msa0528830:exon | 15.0% |
!!! | TAAATGGATTTATTGATTTT+TGG | + | chr4_1:1804865-1804884 | Msa0528830:three_prime_UTR | 15.0% |
!!! | AATTTTCCTTTAAATATGAT+AGG | - | chr4_1:1805016-1805035 | Msa0528840:three_prime_UTR | 15.0% |
!!! | AAAGTTGTTTTTTTTTATTC+TGG | - | chr4_1:1805658-1805677 | Msa0528840:intron | 15.0% |
!! | TGAAAAGATATACATAAAAA+AGG | + | chr4_1:1806565-1806584 | None:intergenic | 15.0% |
!!! | ATATTTCTTTTGGAAATTTA+GGG | + | chr4_1:1807468-1807487 | None:intergenic | 15.0% |
!!! | TATATTTCTTTTGGAAATTT+AGG | + | chr4_1:1807469-1807488 | None:intergenic | 15.0% |
!!! | TTTTGTATACATTATTTTGT+AGG | - | chr4_1:1807889-1807908 | Msa0528840:intron | 15.0% |
!! | GAAAAAAAGAGATTACAAAA+TGG | + | chr4_1:1803221-1803240 | Msa0528830:CDS | 20.0% |
!!! | ATTTTTATTCACATTCAAGT+GGG | + | chr4_1:1803449-1803468 | Msa0528830:intron | 20.0% |
!! | AAGAAAAATATAAGGAATTG+AGG | + | chr4_1:1803544-1803563 | Msa0528830:intron | 20.0% |
!! | TTGCTAAATTAAATCATATG+TGG | + | chr4_1:1804312-1804331 | Msa0528830:CDS | 20.0% |
!! | TTAAACATATGATTAGTAGT+TGG | - | chr4_1:1804453-1804472 | Msa0528840:three_prime_UTR | 20.0% |
!! | TAAACATATGATTAGTAGTT+GGG | - | chr4_1:1804454-1804473 | Msa0528840:three_prime_UTR | 20.0% |
!! | TCTAAAAAAAACACAATGTT+AGG | + | chr4_1:1804525-1804544 | Msa0528830:three_prime_UTR | 20.0% |
!!! | AACATTGTGTTTTTTTTAGA+TGG | - | chr4_1:1804525-1804544 | Msa0528840:three_prime_UTR | 20.0% |
!! | AAAAAAAATTCTTTCCCAAA+GGG | + | chr4_1:1804601-1804620 | Msa0528830:three_prime_UTR | 20.0% |
!! | AAAAAAAAATTCTTTCCCAA+AGG | + | chr4_1:1804602-1804621 | Msa0528830:three_prime_UTR | 20.0% |
!!! | TTTTCTGTTTGTTATATAGT+AGG | - | chr4_1:1804632-1804651 | Msa0528840:three_prime_UTR | 20.0% |
!!! | CAACAATAGTTTAAAATAAG+TGG | + | chr4_1:1804941-1804960 | Msa0528830:three_prime_UTR | 20.0% |
!!! | AAAGTACCTATCATATTTAA+AGG | + | chr4_1:1805025-1805044 | Msa0528830:three_prime_UTR | 20.0% |
!! | ACATAAGTAAGTGTAATATT+GGG | + | chr4_1:1805166-1805185 | Msa0528830:three_prime_UTR | 20.0% |
!! | AACATAAGTAAGTGTAATAT+TGG | + | chr4_1:1805167-1805186 | Msa0528830:three_prime_UTR | 20.0% |
!! | ATATAATAGGAATAAAGAAG+TGG | + | chr4_1:1805449-1805468 | None:intergenic | 20.0% |
!! | ATTGAAGCTTATCATATAAT+AGG | + | chr4_1:1805462-1805481 | None:intergenic | 20.0% |
!! | TTATGTATAATACATCAATC+AGG | - | chr4_1:1805882-1805901 | Msa0528840:CDS | 20.0% |
!!! | TTTAGAGTTATTATCAGATA+TGG | - | chr4_1:1805984-1806003 | Msa0528840:CDS | 20.0% |
!!! | AAAAGTACAAGTTTATGATA+TGG | - | chr4_1:1806050-1806069 | Msa0528840:intron | 20.0% |
!!! | TAGTATTTTAGCAACTAAAA+TGG | - | chr4_1:1806081-1806100 | Msa0528840:intron | 20.0% |
!! | ATATGTACTACTGAAAATAA+GGG | + | chr4_1:1806195-1806214 | None:intergenic | 20.0% |
!! | TATATGTACTACTGAAAATA+AGG | + | chr4_1:1806196-1806215 | None:intergenic | 20.0% |
!! | TCAATACTATAAACAAAAAG+GGG | + | chr4_1:1807008-1807027 | None:intergenic | 20.0% |
!! | GTCAATACTATAAACAAAAA+GGG | + | chr4_1:1807009-1807028 | None:intergenic | 20.0% |
!! | TGTCAATACTATAAACAAAA+AGG | + | chr4_1:1807010-1807029 | None:intergenic | 20.0% |
!!! | TTTACTTTAGGTTAAAAAAG+AGG | - | chr4_1:1807230-1807249 | Msa0528840:CDS | 20.0% |
!!! | TTTTAAAAAGTCCATCTTAT+TGG | - | chr4_1:1807520-1807539 | Msa0528840:intron | 20.0% |
!! | TTATACAACTATACTGAATT+TGG | + | chr4_1:1808008-1808027 | None:intergenic | 20.0% |
!! | TGTAATGAAATATATAGACA+CGG | - | chr4_1:1808736-1808755 | Msa0528840:CDS | 20.0% |
!!! | TGCTTTTGTTTAAATCATAT+TGG | - | chr4_1:1809214-1809233 | Msa0528840:five_prime_UTR | 20.0% |
!!! | ATTTTAAAAGACTTTAACGG+TGG | - | chr4_1:1803255-1803274 | Msa0528840:intron | 25.0% |
!!! | AATTTTCTTTCTAGTTAACC+TGG | - | chr4_1:1803284-1803303 | Msa0528840:intron | 25.0% |
!! | CATTTTTATTCACATTCAAG+TGG | + | chr4_1:1803450-1803469 | Msa0528830:intron | 25.0% |
!! | TTGCAGATTTGTGTTAATTT+TGG | - | chr4_1:1803834-1803853 | Msa0528840:three_prime_UTR | 25.0% |
! | AGTAAATCCAGTAAAGAAAT+TGG | + | chr4_1:1804091-1804110 | Msa0528830:intron | 25.0% |
! | ATGGATTTAATGCATATTCA+CGG | - | chr4_1:1804342-1804361 | Msa0528840:three_prime_UTR | 25.0% |
!! | CAAACATTTTTAATGATCTG+AGG | + | chr4_1:1804407-1804426 | Msa0528830:CDS | 25.0% |
! | AAACATATGATTAGTAGTTG+GGG | - | chr4_1:1804455-1804474 | Msa0528840:three_prime_UTR | 25.0% |
!!! | GATTTTTGGTTAGAATCTAA+TGG | + | chr4_1:1804851-1804870 | Msa0528830:three_prime_UTR | 25.0% |
! | CATAAGTAAGTGTAATATTG+GGG | + | chr4_1:1805165-1805184 | Msa0528830:three_prime_UTR | 25.0% |
! | ACAAAATACTTATACGTAGA+TGG | - | chr4_1:1805239-1805258 | Msa0528840:CDS | 25.0% |
! | CAAAATACTTATACGTAGAT+GGG | - | chr4_1:1805240-1805259 | Msa0528840:CDS | 25.0% |
! | CAATGTTTAATTACCAGATT+TGG | - | chr4_1:1805478-1805497 | Msa0528840:CDS | 25.0% |
!! | AACTTGATAAGAAATCCTTT+TGG | - | chr4_1:1805564-1805583 | Msa0528840:CDS | 25.0% |
!! | ACTTGATAAGAAATCCTTTT+GGG | - | chr4_1:1805565-1805584 | Msa0528840:CDS | 25.0% |
! | CATAACAAATGATATACCTA+CGG | + | chr4_1:1805595-1805614 | None:intergenic | 25.0% |
!! | CTTTTCCTAGTAAACTTTTT+GGG | + | chr4_1:1805763-1805782 | None:intergenic | 25.0% |
!! | ACTTTTCCTAGTAAACTTTT+TGG | + | chr4_1:1805764-1805783 | None:intergenic | 25.0% |
! | AAAAAGTTTACTAGGAAAAG+TGG | - | chr4_1:1805763-1805782 | Msa0528840:intron | 25.0% |
!!! | GTCAAATGAAAAGTATTACT+TGG | - | chr4_1:1805819-1805838 | Msa0528840:intron | 25.0% |
! | TTAAAGTTTGATACAGTGAT+TGG | - | chr4_1:1805924-1805943 | Msa0528840:CDS | 25.0% |
! | TGGTTAATGATTCTTTGATA+TGG | - | chr4_1:1805944-1805963 | Msa0528840:CDS | 25.0% |
!!! | AACATAGATAAAGTGCTTTT+TGG | + | chr4_1:1806136-1806155 | None:intergenic | 25.0% |
! | TAAGTTTCTGTAGATCAATT+GGG | + | chr4_1:1806322-1806341 | None:intergenic | 25.0% |
!! | TATATCTTTTCATGAGCAAT+AGG | - | chr4_1:1806573-1806592 | Msa0528840:intron | 25.0% |
! | GCAACACAAATTATAAAAGA+AGG | + | chr4_1:1806600-1806619 | None:intergenic | 25.0% |
! | CAATACTATAAACAAAAAGG+GGG | + | chr4_1:1807007-1807026 | None:intergenic | 25.0% |
! | ATTCCACTTTACTTTACTTT+AGG | - | chr4_1:1807218-1807237 | Msa0528840:intron | 25.0% |
! | TAACCTAAAGTAAAGTAAAG+TGG | + | chr4_1:1807224-1807243 | None:intergenic | 25.0% |
!! | TTAGGTTAAAAAAGAGGTAT+TGG | - | chr4_1:1807236-1807255 | Msa0528840:CDS | 25.0% |
! | ATCTAATATAGAAGCTATTC+TGG | - | chr4_1:1807429-1807448 | Msa0528840:CDS | 25.0% |
!!! | TAAGATGGACTTTTTAAAAC+CGG | + | chr4_1:1807519-1807538 | None:intergenic | 25.0% |
!!! | ATTATTTTGTAGGAAACCAT+GGG | - | chr4_1:1807899-1807918 | Msa0528840:intron | 25.0% |
! | GAAATATATGTTCCATATAG+AGG | - | chr4_1:1807938-1807957 | Msa0528840:intron | 25.0% |
!!! | AAGATTAGAAGTATTTTGCA+AGG | - | chr4_1:1808375-1808394 | Msa0528840:intron | 25.0% |
! | AGTTGGAATATTATCAAGAA+AGG | + | chr4_1:1808451-1808470 | None:intergenic | 25.0% |
!! | TTTCTTGATAATATTCCAAC+TGG | - | chr4_1:1808450-1808469 | Msa0528840:intron | 25.0% |
! | GGTAATAAACTATACATTCA+GGG | + | chr4_1:1808821-1808840 | None:intergenic | 25.0% |
! | AGGTAATAAACTATACATTC+AGG | + | chr4_1:1808822-1808841 | None:intergenic | 25.0% |
! | ATAGTTTATTACCTGTTCAA+TGG | - | chr4_1:1808828-1808847 | Msa0528840:CDS | 25.0% |
! | ATGAAAAGAAACATATGAAG+AGG | - | chr4_1:1809545-1809564 | Msa0528840:five_prime_UTR | 25.0% |
!!! | CAGTTTTTTAATTGTGTGCA+TGG | + | chr4_1:1803342-1803361 | Msa0528830:intron | 30.0% |
ATGGAAAGAAAGGATCAAAT+CGG | + | chr4_1:1803498-1803517 | Msa0528830:intron | 30.0% | |
ATATAAGGAATTGAGGAACA+AGG | + | chr4_1:1803537-1803556 | Msa0528830:intron | 30.0% | |
GAATAAACCAAACACGAAAA+CGG | + | chr4_1:1803999-1804018 | Msa0528830:intron | 30.0% | |
GTATATATCACACAACTCAA+CGG | - | chr4_1:1804115-1804134 | Msa0528840:intron | 30.0% | |
! | AGATAGAAAAACTAACTTGC+AGG | + | chr4_1:1804189-1804208 | Msa0528830:intron | 30.0% |
!! | AATGTTTTTGTTTGCTTGAG+TGG | - | chr4_1:1804230-1804249 | Msa0528840:three_prime_UTR | 30.0% |
! | TATGTGTTGATAAACCCTTT+GGG | - | chr4_1:1804584-1804603 | Msa0528840:three_prime_UTR | 30.0% |
ATTTGTGTGAAGAATCAGTT+AGG | - | chr4_1:1804662-1804681 | Msa0528840:three_prime_UTR | 30.0% | |
GATGGTCAATATCAACTAAT+TGG | + | chr4_1:1804721-1804740 | Msa0528830:three_prime_UTR | 30.0% | |
! | GGAAGTACAAAAAAACATGA+TGG | + | chr4_1:1804739-1804758 | Msa0528830:three_prime_UTR | 30.0% |
CAAAGCAAATAATCTCTAAC+AGG | + | chr4_1:1804760-1804779 | Msa0528830:three_prime_UTR | 30.0% | |
AGACTTCACTCTAAACTAAA+TGG | + | chr4_1:1804881-1804900 | Msa0528830:three_prime_UTR | 30.0% | |
!!! | ATAAGTGGATCCACTTTTTT+GGG | + | chr4_1:1804926-1804945 | Msa0528830:three_prime_UTR | 30.0% |
!!! | AATAAGTGGATCCACTTTTT+TGG | + | chr4_1:1804927-1804946 | Msa0528830:three_prime_UTR | 30.0% |
AAATTCTACTGAACAGCTAA+AGG | + | chr4_1:1805001-1805020 | Msa0528830:three_prime_UTR | 30.0% | |
TATATACAAGGACTCATACA+GGG | + | chr4_1:1805090-1805109 | Msa0528830:three_prime_UTR | 30.0% | |
TTATATACAAGGACTCATAC+AGG | + | chr4_1:1805091-1805110 | Msa0528830:three_prime_UTR | 30.0% | |
TGATGGGGATATTATATACA+AGG | + | chr4_1:1805102-1805121 | Msa0528830:three_prime_UTR | 30.0% | |
GCAGGAAATTATACTAGTAA+TGG | - | chr4_1:1805352-1805371 | Msa0528840:intron | 30.0% | |
TAATAGGAATAAAGAAGTGG+TGG | + | chr4_1:1805446-1805465 | None:intergenic | 30.0% | |
AAGGATTTCTTATCAAGTTC+CGG | + | chr4_1:1805563-1805582 | None:intergenic | 30.0% | |
!!! | GTTTTTTTTTATTCTGGCAG+TGG | - | chr4_1:1805664-1805683 | Msa0528840:intron | 30.0% |
GTACAAGTTTATGATATGGA+TGG | - | chr4_1:1806054-1806073 | Msa0528840:intron | 30.0% | |
TACTACTGAAAATAAGGGAA+GGG | + | chr4_1:1806190-1806209 | None:intergenic | 30.0% | |
CTAAGTTTCTGTAGATCAAT+TGG | + | chr4_1:1806323-1806342 | None:intergenic | 30.0% | |
CAATTGATCTACAGAAACTT+AGG | - | chr4_1:1806321-1806340 | Msa0528840:CDS | 30.0% | |
! | TAAAAAAGGCATAGCAAAAC+AGG | + | chr4_1:1806551-1806570 | None:intergenic | 30.0% |
!! | GTTGCATGATTTGTTGAATT+TGG | - | chr4_1:1806615-1806634 | Msa0528840:intron | 30.0% |
! | ATTAAGAGTCTTGTGTTCAA+AGG | - | chr4_1:1806682-1806701 | Msa0528840:intron | 30.0% |
! | AATGGTGAACTCACAATTTT+TGG | + | chr4_1:1806973-1806992 | None:intergenic | 30.0% |
GGGAGGATACAAATTATAAA+TGG | + | chr4_1:1807094-1807113 | None:intergenic | 30.0% | |
TTAGGATGAAGAAATGCATA+AGG | + | chr4_1:1807173-1807192 | None:intergenic | 30.0% | |
TTGCTTGATATGCATCAAAA+TGG | - | chr4_1:1807563-1807582 | Msa0528840:intron | 30.0% | |
AATCATTGTAGACAAACCAA+AGG | - | chr4_1:1807664-1807683 | Msa0528840:intron | 30.0% | |
!! | CATTATTTTGTAGGAAACCA+TGG | - | chr4_1:1807898-1807917 | Msa0528840:intron | 30.0% |
!! | TTATTTTGTAGGAAACCATG+GGG | - | chr4_1:1807900-1807919 | Msa0528840:intron | 30.0% |
!! | CTATTTTTCTTTTTTCCCCA+TGG | + | chr4_1:1807918-1807937 | None:intergenic | 30.0% |
CATGGGGAAAAAAGAAAAAT+AGG | - | chr4_1:1807916-1807935 | Msa0528840:intron | 30.0% | |
ACAACTATACTGAATTTGGT+GGG | + | chr4_1:1808004-1808023 | None:intergenic | 30.0% | |
TACAACTATACTGAATTTGG+TGG | + | chr4_1:1808005-1808024 | None:intergenic | 30.0% | |
GTTCATTCTCTATGTAATCA+CGG | - | chr4_1:1808073-1808092 | Msa0528840:intron | 30.0% | |
!! | GTAATGGGTTGTAATAATTG+TGG | - | chr4_1:1808190-1808209 | Msa0528840:intron | 30.0% |
! | CATTCAATCAACCTTTAAAG+GGG | + | chr4_1:1808240-1808259 | None:intergenic | 30.0% |
GCATTCAATCAACCTTTAAA+GGG | + | chr4_1:1808241-1808260 | None:intergenic | 30.0% | |
TGCATTCAATCAACCTTTAA+AGG | + | chr4_1:1808242-1808261 | None:intergenic | 30.0% | |
AACAACAGTATGTCATTAAC+TGG | - | chr4_1:1808336-1808355 | Msa0528840:intron | 30.0% | |
CAAAATACTTCTAATCTTGC+AGG | + | chr4_1:1808373-1808392 | None:intergenic | 30.0% | |
TGGAATATTATCAAGAAAGG+AGG | + | chr4_1:1808448-1808467 | None:intergenic | 30.0% | |
! | TTGCATTTTACGTAGTACAT+GGG | + | chr4_1:1808670-1808689 | None:intergenic | 30.0% |
! | ATTGCATTTTACGTAGTACA+TGG | + | chr4_1:1808671-1808690 | None:intergenic | 30.0% |
TATTCTCATTACCATCATGT+TGG | - | chr4_1:1808793-1808812 | Msa0528840:CDS | 30.0% | |
! | TGATTCCAATAAGAAAGCAT+CGG | - | chr4_1:1808969-1808988 | Msa0528840:intron | 30.0% |
TCTACTTTGTCGTCAAAAAA+AGG | - | chr4_1:1809102-1809121 | Msa0528840:five_prime_UTR | 30.0% | |
CTACTTTGTCGTCAAAAAAA+GGG | - | chr4_1:1809103-1809122 | Msa0528840:five_prime_UTR | 30.0% | |
! | TTTTCATGCTTCTCAATTCT+TGG | + | chr4_1:1809287-1809306 | None:intergenic | 30.0% |
! | ATGCTTCTTTTTCCTTGATA+TGG | - | chr4_1:1809405-1809424 | Msa0528840:five_prime_UTR | 30.0% |
AATTGTGTGCATGGATTCAA+AGG | + | chr4_1:1803333-1803352 | Msa0528830:intron | 35.0% | |
TCGGAGAAAAATCACAAAGA+AGG | + | chr4_1:1803479-1803498 | Msa0528830:intron | 35.0% | |
TCCTTTCTTTCCATTCTCAT+TGG | - | chr4_1:1803504-1803523 | Msa0528840:three_prime_UTR | 35.0% | |
TCCAATGAGAATGGAAAGAA+AGG | + | chr4_1:1803508-1803527 | Msa0528830:intron | 35.0% | |
TTGAAGAGCTTCAAATTCTG+TGG | - | chr4_1:1803603-1803622 | Msa0528840:three_prime_UTR | 35.0% | |
CAAATTCTGTGGACACAATT+TGG | - | chr4_1:1803614-1803633 | Msa0528840:three_prime_UTR | 35.0% | |
! | AATTTGAAGCTGGTGAATGA+GGG | + | chr4_1:1803668-1803687 | Msa0528830:CDS | 35.0% |
ACCAGCTTCAAATTCAATTC+TGG | - | chr4_1:1803674-1803693 | Msa0528840:three_prime_UTR | 35.0% | |
CCAGCTTCAAATTCAATTCT+GGG | - | chr4_1:1803675-1803694 | Msa0528840:three_prime_UTR | 35.0% | |
CTTCAAATTCAATTCTGGGT+CGG | - | chr4_1:1803679-1803698 | Msa0528840:three_prime_UTR | 35.0% | |
! | AAGTGAATCTCACTGTTTTG+AGG | + | chr4_1:1803724-1803743 | Msa0528830:CDS | 35.0% |
TCACTTTGTTGCAGTGTTTA+AGG | - | chr4_1:1803738-1803757 | Msa0528840:three_prime_UTR | 35.0% | |
TACATTGCAAAGTGACTCTA+TGG | + | chr4_1:1803780-1803799 | Msa0528830:CDS | 35.0% | |
! | TGAAAAGTGTGTGAAGGTTA+TGG | - | chr4_1:1803860-1803879 | Msa0528840:three_prime_UTR | 35.0% |
TGAAGTGTGTGACAAAGAAA+TGG | - | chr4_1:1803897-1803916 | Msa0528840:three_prime_UTR | 35.0% | |
AATGGAAGTTAGATCATCAG+AGG | - | chr4_1:1803915-1803934 | Msa0528840:three_prime_UTR | 35.0% | |
ATGGAAGTTAGATCATCAGA+GGG | - | chr4_1:1803916-1803935 | Msa0528840:three_prime_UTR | 35.0% | |
TGGCATTCCAATTTCTTTAC+TGG | - | chr4_1:1804081-1804100 | Msa0528840:intron | 35.0% | |
AATATAACATCTCCTTGAGG+AGG | + | chr4_1:1804141-1804160 | Msa0528830:intron | 35.0% | |
GCAAATATAACATCTCCTTG+AGG | + | chr4_1:1804144-1804163 | Msa0528830:intron | 35.0% | |
! | TAACTTGCAGGAAGTAGAAT+GGG | + | chr4_1:1804177-1804196 | Msa0528830:intron | 35.0% |
ATCATGCTTAGCTGAATGTT+GGG | - | chr4_1:1804553-1804572 | Msa0528840:three_prime_UTR | 35.0% | |
! | GTATGTGTTGATAAACCCTT+TGG | - | chr4_1:1804583-1804602 | Msa0528840:three_prime_UTR | 35.0% |
!! | ATTTGCTTTGTTGCGTTTTG+TGG | - | chr4_1:1804770-1804789 | Msa0528840:three_prime_UTR | 35.0% |
GGGGTACACTAAAAAGATTA+GGG | + | chr4_1:1804906-1804925 | Msa0528830:three_prime_UTR | 35.0% | |
TGGGGTACACTAAAAAGATT+AGG | + | chr4_1:1804907-1804926 | Msa0528830:three_prime_UTR | 35.0% | |
TTTAGTGTACCCCAAAAAAG+TGG | - | chr4_1:1804913-1804932 | Msa0528840:three_prime_UTR | 35.0% | |
!!! | TAAGTGGATCCACTTTTTTG+GGG | + | chr4_1:1804925-1804944 | Msa0528830:three_prime_UTR | 35.0% |
! | TACTTATACGTAGATGGGTT+TGG | - | chr4_1:1805245-1805264 | Msa0528840:CDS | 35.0% |
! | TAAAGAAGTGGTGGAAGAAT+AGG | + | chr4_1:1805437-1805456 | None:intergenic | 35.0% |
! | CAAATCTGAAATGCCAAATC+TGG | + | chr4_1:1805494-1805513 | None:intergenic | 35.0% |
GAGTTCCCAAAAAGTTTACT+AGG | - | chr4_1:1805755-1805774 | Msa0528840:intron | 35.0% | |
! | TTTTCATTTGACCAGCTAAC+AGG | + | chr4_1:1805811-1805830 | None:intergenic | 35.0% |
!! | TGAAAAGTATTACTTGGAGC+AGG | - | chr4_1:1805825-1805844 | Msa0528840:intron | 35.0% |
ACTACTGAAAATAAGGGAAG+GGG | + | chr4_1:1806189-1806208 | None:intergenic | 35.0% | |
GTACTACTGAAAATAAGGGA+AGG | + | chr4_1:1806191-1806210 | None:intergenic | 35.0% | |
TAAGTGCCTGGTAATTAACA+CGG | + | chr4_1:1806349-1806368 | None:intergenic | 35.0% | |
! | ATTGCATCTGAGATATGAGA+TGG | - | chr4_1:1806442-1806461 | Msa0528840:CDS | 35.0% |
GTAATGATCTGACAAATGAG+AGG | - | chr4_1:1806710-1806729 | Msa0528840:intron | 35.0% | |
AGGAAATAGTGTCTGAAGAA+AGG | - | chr4_1:1806800-1806819 | Msa0528840:intron | 35.0% | |
ACTATAAACAAAAAGGGGGA+GGG | + | chr4_1:1807003-1807022 | None:intergenic | 35.0% | |
TACTATAAACAAAAAGGGGG+AGG | + | chr4_1:1807004-1807023 | None:intergenic | 35.0% | |
GCATTTCTTCATCCTAATCA+TGG | - | chr4_1:1807176-1807195 | Msa0528840:intron | 35.0% | |
AACAAGCAGTAACCATGATT+AGG | + | chr4_1:1807191-1807210 | None:intergenic | 35.0% | |
! | CCATCTGTGATGAATGATTT+TGG | + | chr4_1:1807287-1807306 | None:intergenic | 35.0% |
CCAAAATCATTCATCACAGA+TGG | - | chr4_1:1807284-1807303 | Msa0528840:CDS | 35.0% | |
! | TGCTTTGGATTTCATGGTTT+CGG | - | chr4_1:1807308-1807327 | Msa0528840:intron | 35.0% |
ACCTTTATTCCTACCTATGA+TGG | - | chr4_1:1807342-1807361 | Msa0528840:intron | 35.0% | |
CCTTTATTCCTACCTATGAT+GGG | - | chr4_1:1807343-1807362 | Msa0528840:intron | 35.0% | |
AAAAGTCCATCTTATTGGAC+CGG | - | chr4_1:1807525-1807544 | Msa0528840:intron | 35.0% | |
TACAAACTCATTCCATGGAA+GGG | + | chr4_1:1807591-1807610 | None:intergenic | 35.0% | |
ACAATGATTCGACGATAAGT+CGG | + | chr4_1:1807653-1807672 | None:intergenic | 35.0% | |
TAGAAATAATCCTCCTCCTT+TGG | + | chr4_1:1807683-1807702 | None:intergenic | 35.0% | |
!! | ACAAAGTGTGATGATTTGCT+AGG | - | chr4_1:1807734-1807753 | Msa0528840:intron | 35.0% |
CTTACTTGAGTAGAGTTATG+AGG | + | chr4_1:1807761-1807780 | None:intergenic | 35.0% | |
AGATTGCTCTTGCATACTTA+TGG | + | chr4_1:1807830-1807849 | None:intergenic | 35.0% | |
ATGCAAGAGCAATCTGAAAA+TGG | - | chr4_1:1807835-1807854 | Msa0528840:intron | 35.0% | |
TTTGGTGGGGGAAAAAATAA+GGG | + | chr4_1:1807990-1808009 | None:intergenic | 35.0% | |
! | ATTTGGTGGGGGAAAAAATA+AGG | + | chr4_1:1807991-1808010 | None:intergenic | 35.0% |
! | AACTATACTGAATTTGGTGG+GGG | + | chr4_1:1808002-1808021 | None:intergenic | 35.0% |
! | CAACTATACTGAATTTGGTG+GGG | + | chr4_1:1808003-1808022 | None:intergenic | 35.0% |
GGATGAAAAAACTGAACACT+TGG | + | chr4_1:1808304-1808323 | None:intergenic | 35.0% | |
! | ACTGTTGTTTGTATCTCTTG+AGG | + | chr4_1:1808325-1808344 | None:intergenic | 35.0% |
AAGAGGCAAATCTAGATTCA+AGG | + | chr4_1:1808565-1808584 | None:intergenic | 35.0% | |
GAACAAAGCATACAAATTGC+AGG | + | chr4_1:1808600-1808619 | None:intergenic | 35.0% | |
GTACTACGTAAAATGCAATG+AGG | - | chr4_1:1808672-1808691 | Msa0528840:CDS | 35.0% | |
TTATCACACAACCATTGAAC+AGG | + | chr4_1:1808842-1808861 | None:intergenic | 35.0% | |
ATACTAGCTCCTCATTATCA+CGG | - | chr4_1:1808902-1808921 | Msa0528840:exon | 35.0% | |
! | ATCTGAGATTAGTAGCACTA+GGG | + | chr4_1:1808999-1809018 | None:intergenic | 35.0% |
! | TATCTGAGATTAGTAGCACT+AGG | + | chr4_1:1809000-1809019 | None:intergenic | 35.0% |
! | AGTGCTACTAATCTCAGATA+TGG | - | chr4_1:1809000-1809019 | Msa0528840:intron | 35.0% |
TATGCATATCGATCTGCATT+TGG | - | chr4_1:1809156-1809175 | Msa0528840:five_prime_UTR | 35.0% | |
AAACAAAAGCAATGCAGAGT+TGG | + | chr4_1:1809205-1809224 | None:intergenic | 35.0% | |
!!! | CAGTTGGTAACTTTTACTGT+AGG | + | chr4_1:1809247-1809266 | None:intergenic | 35.0% |
GATCATGCTTATGAAGTCAA+AGG | + | chr4_1:1809658-1809677 | None:intergenic | 35.0% | |
GCAAGCAAGTTCTTCATCAT+TGG | + | chr4_1:1803142-1803161 | Msa0528830:CDS | 40.0% | |
GTAGATGAATTGAGAGATCC+AGG | + | chr4_1:1803305-1803324 | Msa0528830:intron | 40.0% | |
GTGCATGGATTCAAAGGTTT+GGG | + | chr4_1:1803327-1803346 | Msa0528830:intron | 40.0% | |
TGTGCATGGATTCAAAGGTT+TGG | + | chr4_1:1803328-1803347 | Msa0528830:intron | 40.0% | |
ATTCTGTGGACACAATTTGG+TGG | - | chr4_1:1803617-1803636 | Msa0528840:three_prime_UTR | 40.0% | |
! | GAATTTGAAGCTGGTGAATG+AGG | + | chr4_1:1803669-1803688 | Msa0528830:CDS | 40.0% |
! | CCCAGAATTGAATTTGAAGC+TGG | + | chr4_1:1803678-1803697 | Msa0528830:CDS | 40.0% |
TGCAAAGTGACTCTATGGAA+AGG | + | chr4_1:1803775-1803794 | Msa0528830:CDS | 40.0% | |
CAATGTACTTCTTACGTACG+AGG | - | chr4_1:1803793-1803812 | Msa0528840:three_prime_UTR | 40.0% | |
! | TGGTTGTGAAAAGTGTGTGA+AGG | - | chr4_1:1803854-1803873 | Msa0528840:three_prime_UTR | 40.0% |
! | TGAAGGTTATGGTGATGAAG+TGG | - | chr4_1:1803871-1803890 | Msa0528840:three_prime_UTR | 40.0% |
TTTGTTCAACCATTGTGCTG+TGG | - | chr4_1:1804022-1804041 | Msa0528840:intron | 40.0% | |
TTGTGACTGTGAGTGAACTA+TGG | - | chr4_1:1804061-1804080 | Msa0528840:intron | 40.0% | |
! | CTAACTTGCAGGAAGTAGAA+TGG | + | chr4_1:1804178-1804197 | Msa0528830:intron | 40.0% |
!!! | AGTGGTTTTGTGATGTGGTT+TGG | - | chr4_1:1804248-1804267 | Msa0528840:three_prime_UTR | 40.0% |
GGTTTGGAAATGTGTAGCTT+TGG | - | chr4_1:1804264-1804283 | Msa0528840:three_prime_UTR | 40.0% | |
GATCATGCTTAGCTGAATGT+TGG | - | chr4_1:1804552-1804571 | Msa0528840:three_prime_UTR | 40.0% | |
TCATGCTTAGCTGAATGTTG+GGG | - | chr4_1:1804554-1804573 | Msa0528840:three_prime_UTR | 40.0% | |
!! | ATAACAGCCAAGTACTGAGT+AGG | - | chr4_1:1804801-1804820 | Msa0528840:three_prime_UTR | 40.0% |
!! | TAACAGCCAAGTACTGAGTA+GGG | - | chr4_1:1804802-1804821 | Msa0528840:three_prime_UTR | 40.0% |
ATCTATCCCTACTCAGTACT+TGG | + | chr4_1:1804811-1804830 | Msa0528830:three_prime_UTR | 40.0% | |
CTCATACAGGGTCATTGAAA+TGG | + | chr4_1:1805078-1805097 | Msa0528830:three_prime_UTR | 40.0% | |
TTTCTGCTGGAGAGATTGAT+GGG | + | chr4_1:1805118-1805137 | Msa0528830:three_prime_UTR | 40.0% | |
! | GACTCTTATTTGCTTTCTGC+TGG | + | chr4_1:1805131-1805150 | Msa0528830:three_prime_UTR | 40.0% |
!! | TTTCTAAGAGTGTCCTGCAA+TGG | - | chr4_1:1805376-1805395 | Msa0528840:intron | 40.0% |
!! | TTCTAAGAGTGTCCTGCAAT+GGG | - | chr4_1:1805377-1805396 | Msa0528840:intron | 40.0% |
TTTGAATCAAATGCGTGCAG+CGG | - | chr4_1:1805402-1805421 | Msa0528840:intron | 40.0% | |
GGCATTTCAGATTTGTGACA+TGG | - | chr4_1:1805499-1805518 | Msa0528840:CDS | 40.0% | |
TACGTAGCTTAACCCAAAGT+TGG | - | chr4_1:1806108-1806127 | Msa0528840:intron | 40.0% | |
!! | TGCTTTTTGGCACCAACTTT+GGG | + | chr4_1:1806123-1806142 | None:intergenic | 40.0% |
TACTGAAAATAAGGGAAGGG+GGG | + | chr4_1:1806187-1806206 | None:intergenic | 40.0% | |
CTACTGAAAATAAGGGAAGG+GGG | + | chr4_1:1806188-1806207 | None:intergenic | 40.0% | |
ACCTTGTGTTTGGCAAAAAG+CGG | + | chr4_1:1806254-1806273 | None:intergenic | 40.0% | |
TTGGGAGACCATTATTTGCT+AGG | + | chr4_1:1806304-1806323 | None:intergenic | 40.0% | |
ACCCCTCAAATTGAGAATCT+GGG | - | chr4_1:1806374-1806393 | Msa0528840:CDS | 40.0% | |
TCAGATATGCATTCCCTTCA+TGG | - | chr4_1:1806770-1806789 | Msa0528840:intron | 40.0% | |
TTTCCTTCTCTCTCCATGAA+GGG | + | chr4_1:1806786-1806805 | None:intergenic | 40.0% | |
ATTTCCTTCTCTCTCCATGA+AGG | + | chr4_1:1806787-1806806 | None:intergenic | 40.0% | |
CAATGTAAATCTGTGTCTCC+CGG | + | chr4_1:1806894-1806913 | None:intergenic | 40.0% | |
ACACAGATTTACATTGCAGC+CGG | - | chr4_1:1806898-1806917 | Msa0528840:intron | 40.0% | |
TTCACCACCATAAATCTCAC+CGG | + | chr4_1:1806920-1806939 | None:intergenic | 40.0% | |
CACAAGCTAGAATCATTCAG+TGG | + | chr4_1:1807056-1807075 | None:intergenic | 40.0% | |
AGCACTTGGATTGAAAGTTG+TGG | - | chr4_1:1807122-1807141 | Msa0528840:CDS | 40.0% | |
!! | GAAAGTTGTGGCTCTGAAAA+TGG | - | chr4_1:1807134-1807153 | Msa0528840:intron | 40.0% |
GAACTGCTGTAACTCATCAA+GGG | + | chr4_1:1807265-1807284 | None:intergenic | 40.0% | |
CCCATCATAGGTAGGAATAA+AGG | + | chr4_1:1807346-1807365 | None:intergenic | 40.0% | |
! | TTTTGCCATGTTCCCATCAT+AGG | + | chr4_1:1807358-1807377 | None:intergenic | 40.0% |
AACATGGCAAAACTTGTGGA+AGG | - | chr4_1:1807366-1807385 | Msa0528840:intron | 40.0% | |
CGTGAGTAAATAGATACCTG+CGG | + | chr4_1:1807395-1807414 | None:intergenic | 40.0% | |
TATCTTATTAGCGCTCATGC+AGG | - | chr4_1:1807489-1807508 | Msa0528840:intron | 40.0% | |
! | GCAATTGTACAAGCCTTTTC+CGG | + | chr4_1:1807547-1807566 | None:intergenic | 40.0% |
ATCAAAATGGAACCCTTCCA+TGG | - | chr4_1:1807576-1807595 | Msa0528840:intron | 40.0% | |
CTACAAACTCATTCCATGGA+AGG | + | chr4_1:1807592-1807611 | None:intergenic | 40.0% | |
GCATCTACAAACTCATTCCA+TGG | + | chr4_1:1807596-1807615 | None:intergenic | 40.0% | |
ACAGGTTCACGAAAAGAGAA+TGG | - | chr4_1:1807622-1807641 | Msa0528840:intron | 40.0% | |
CAGGTTCACGAAAAGAGAAT+GGG | - | chr4_1:1807623-1807642 | Msa0528840:intron | 40.0% | |
CATTGTAGACAAACCAAAGG+AGG | - | chr4_1:1807667-1807686 | Msa0528840:intron | 40.0% | |
GCTCTTGCATACTTATGGTT+GGG | + | chr4_1:1807825-1807844 | None:intergenic | 40.0% | |
TGCTCTTGCATACTTATGGT+TGG | + | chr4_1:1807826-1807845 | None:intergenic | 40.0% | |
CATCTTTGCAAGCCTCTATA+TGG | + | chr4_1:1807953-1807972 | None:intergenic | 40.0% | |
! | TTTTCCACTTTACAAGCTGC+AGG | - | chr4_1:1808164-1808183 | Msa0528840:intron | 40.0% |
TGGGTTGTAATAATTGTGGC+CGG | - | chr4_1:1808194-1808213 | Msa0528840:intron | 40.0% | |
! | CGATGATCAAGTTTTTGACC+CGG | + | chr4_1:1808216-1808235 | None:intergenic | 40.0% |
TTGATCATCGTCCCCTTTAA+AGG | - | chr4_1:1808226-1808245 | Msa0528840:intron | 40.0% | |
ATCGCAAATGTAGCCTTCTA+CGG | + | chr4_1:1808278-1808297 | None:intergenic | 40.0% | |
! | AGTATTTTGCAAGGTCTCCA+AGG | - | chr4_1:1808384-1808403 | Msa0528840:intron | 40.0% |
TTATCAAGAAAGGAGGCTCA+AGG | + | chr4_1:1808441-1808460 | None:intergenic | 40.0% | |
AGAATTGGAACTAGACCAGT+TGG | + | chr4_1:1808468-1808487 | None:intergenic | 40.0% | |
GATCTTCGAGCAGAAAGAAT+TGG | + | chr4_1:1808483-1808502 | None:intergenic | 40.0% | |
AAGGGGAAAAAATGATCCTG+CGG | + | chr4_1:1808517-1808536 | None:intergenic | 40.0% | |
TAGCAGTCGGAATAAGAGAA+GGG | + | chr4_1:1808535-1808554 | None:intergenic | 40.0% | |
ATAGCAGTCGGAATAAGAGA+AGG | + | chr4_1:1808536-1808555 | None:intergenic | 40.0% | |
! | TCTGAGATTAGTAGCACTAG+GGG | + | chr4_1:1808998-1809017 | None:intergenic | 40.0% |
TGCTGTCTGAGAAAAACCAT+TGG | - | chr4_1:1809068-1809087 | Msa0528840:five_prime_UTR | 40.0% | |
GTCAAAAAAAGGGTCTGACT+CGG | - | chr4_1:1809113-1809132 | Msa0528840:five_prime_UTR | 40.0% | |
TATGCATACACCTTGACACT+GGG | + | chr4_1:1809144-1809163 | None:intergenic | 40.0% | |
ATATGCATACACCTTGACAC+TGG | + | chr4_1:1809145-1809164 | None:intergenic | 40.0% | |
CACATTCATAACTGTGCAGT+TGG | + | chr4_1:1809263-1809282 | None:intergenic | 40.0% | |
AAAGTTCTGCTGCAACTTTC+TGG | - | chr4_1:1809356-1809375 | Msa0528840:five_prime_UTR | 40.0% | |
!! | CTTTCTGGCTCTGATACATT+TGG | - | chr4_1:1809371-1809390 | Msa0528840:five_prime_UTR | 40.0% |
TTTCCTTGATATGGAAGAGC+TGG | - | chr4_1:1809414-1809433 | Msa0528840:five_prime_UTR | 40.0% | |
ATGATCATCTGTAGTCACTC+TGG | - | chr4_1:1809672-1809691 | Msa0528840:five_prime_UTR | 40.0% | |
AGGTGAGGATCCAATGAGAA+TGG | + | chr4_1:1803517-1803536 | Msa0528830:intron | 45.0% | |
AGGAATTGAGGAACAAGGTG+AGG | + | chr4_1:1803532-1803551 | Msa0528830:intron | 45.0% | |
AAGCTGCTCCTTTGATTCCA+AGG | - | chr4_1:1803971-1803990 | Msa0528840:intron | 45.0% | |
AAACGGCTCCTTGGAATCAA+AGG | + | chr4_1:1803982-1804001 | Msa0528830:intron | 45.0% | |
CAAACATGTCCACAGCACAA+TGG | + | chr4_1:1804034-1804053 | Msa0528830:intron | 45.0% | |
CATTGTGCTGTGGACATGTT+TGG | - | chr4_1:1804032-1804051 | Msa0528840:intron | 45.0% | |
!!! | GCTTGAGTGGTTTTGTGATG+TGG | - | chr4_1:1804243-1804262 | Msa0528840:three_prime_UTR | 45.0% |
GTACAGTGGAGAATCTGGAT+GGG | + | chr4_1:1804974-1804993 | Msa0528830:three_prime_UTR | 45.0% | |
TGTACAGTGGAGAATCTGGA+TGG | + | chr4_1:1804975-1804994 | Msa0528830:three_prime_UTR | 45.0% | |
GAGTTGTACAGTGGAGAATC+TGG | + | chr4_1:1804979-1804998 | Msa0528830:three_prime_UTR | 45.0% | |
CAGCTAAAGGAGTTGTACAG+TGG | + | chr4_1:1804988-1805007 | Msa0528830:three_prime_UTR | 45.0% | |
TTCTGCTGGAGAGATTGATG+GGG | + | chr4_1:1805117-1805136 | Msa0528830:three_prime_UTR | 45.0% | |
CTTTCTGCTGGAGAGATTGA+TGG | + | chr4_1:1805119-1805138 | Msa0528830:three_prime_UTR | 45.0% | |
! | ACGTAGATGGGTTTGGTAGA+CGG | - | chr4_1:1805252-1805271 | Msa0528840:CDS | 45.0% |
CTGCAAGATTTCAGCTGACA+CGG | + | chr4_1:1805336-1805355 | None:intergenic | 45.0% | |
!! | TCTAAGAGTGTCCTGCAATG+GGG | - | chr4_1:1805378-1805397 | Msa0528840:intron | 45.0% |
TTGATTCAAACCCCCATTGC+AGG | + | chr4_1:1805392-1805411 | None:intergenic | 45.0% | |
GTGACATGGTGACAATTGCT+CGG | - | chr4_1:1805513-1805532 | Msa0528840:CDS | 45.0% | |
! | TCGGCTTTTGAACCTCACAT+TGG | - | chr4_1:1805532-1805551 | Msa0528840:CDS | 45.0% |
! | GAACCTCACATTGGTTGTTC+CGG | - | chr4_1:1805541-1805560 | Msa0528840:CDS | 45.0% |
TCATTTGACCAGCTAACAGG+AGG | + | chr4_1:1805808-1805827 | None:intergenic | 45.0% | |
!! | GTGCTTTTTGGCACCAACTT+TGG | + | chr4_1:1806124-1806143 | None:intergenic | 45.0% |
TAAGGGAAGGGGGGAAATAT+AGG | + | chr4_1:1806178-1806197 | None:intergenic | 45.0% | |
!!! | ACCGCTTTTTGCCAAACACA+AGG | - | chr4_1:1806250-1806269 | Msa0528840:intron | 45.0% |
! | GCTTTTTGCCAAACACAAGG+TGG | - | chr4_1:1806253-1806272 | Msa0528840:intron | 45.0% |
GATGCACGCCTAGCAAATAA+TGG | - | chr4_1:1806293-1806312 | Msa0528840:CDS | 45.0% | |
! | TAGGTGCCGTGTTAATTACC+AGG | - | chr4_1:1806340-1806359 | Msa0528840:CDS | 45.0% |
CACCCCTCAAATTGAGAATC+TGG | - | chr4_1:1806373-1806392 | Msa0528840:CDS | 45.0% | |
CCCCAGATTCTCAATTTGAG+GGG | + | chr4_1:1806378-1806397 | None:intergenic | 45.0% | |
CCCCTCAAATTGAGAATCTG+GGG | - | chr4_1:1806375-1806394 | Msa0528840:CDS | 45.0% | |
GCCCCAGATTCTCAATTTGA+GGG | + | chr4_1:1806379-1806398 | None:intergenic | 45.0% | |
TGCCCCAGATTCTCAATTTG+AGG | + | chr4_1:1806380-1806399 | None:intergenic | 45.0% | |
TGATTCAGATACTTCGCGAG+AGG | - | chr4_1:1806405-1806424 | Msa0528840:CDS | 45.0% | |
GATTCAGATACTTCGCGAGA+GGG | - | chr4_1:1806406-1806425 | Msa0528840:CDS | 45.0% | |
ATTCAGATACTTCGCGAGAG+GGG | - | chr4_1:1806407-1806426 | Msa0528840:CDS | 45.0% | |
CTCAGATGCAATGCCACAAA+AGG | + | chr4_1:1806434-1806453 | None:intergenic | 45.0% | |
GAGATATGAGATGGACATGC+TGG | - | chr4_1:1806451-1806470 | Msa0528840:CDS | 45.0% | |
! | GCTTTCTCAGGTTGTACTCT+TGG | - | chr4_1:1806473-1806492 | Msa0528840:CDS | 45.0% |
TTGCACTAATGAAGAAGCCG+AGG | - | chr4_1:1806496-1806515 | Msa0528840:CDS | 45.0% | |
ATTCCCTTCATGGAGAGAGA+AGG | - | chr4_1:1806780-1806799 | Msa0528840:intron | 45.0% | |
TCTGAAGAAAGGAGATCCCA+GGG | - | chr4_1:1806811-1806830 | Msa0528840:intron | 45.0% | |
TGTCAAAGGACATAGACCCT+GGG | + | chr4_1:1806830-1806849 | None:intergenic | 45.0% | |
ACCTAAGGCTTGCATAACCA+AGG | + | chr4_1:1806866-1806885 | None:intergenic | 45.0% | |
!! | TGCAAGCCTTAGGTTTTGAC+CGG | - | chr4_1:1806872-1806891 | Msa0528840:intron | 45.0% |
ATTGCAGCCGGTGAGATTTA+TGG | - | chr4_1:1806910-1806929 | Msa0528840:intron | 45.0% | |
AAGGGGGAGGGAGATATAAA+TGG | + | chr4_1:1806991-1807010 | None:intergenic | 45.0% | |
!! | GTTGTGGCTCTGAAAATGGT+TGG | - | chr4_1:1807138-1807157 | Msa0528840:intron | 45.0% |
GGAACTGCTGTAACTCATCA+AGG | + | chr4_1:1807266-1807285 | None:intergenic | 45.0% | |
TTCATCACAGATGGCTGCTT+TGG | - | chr4_1:1807293-1807312 | Msa0528840:CDS | 45.0% | |
! | GATGGCTGCTTTGGATTTCA+TGG | - | chr4_1:1807302-1807321 | Msa0528840:intron | 45.0% |
GATTTCATGGTTTCGGTAGC+CGG | - | chr4_1:1807315-1807334 | Msa0528840:intron | 45.0% | |
!! | GGTAGGAATAAAGGTGTCAC+CGG | + | chr4_1:1807337-1807356 | None:intergenic | 45.0% |
! | TCCTACCTATGATGGGAACA+TGG | - | chr4_1:1807350-1807369 | Msa0528840:intron | 45.0% |
TGGGAACATGGCAAAACTTG+TGG | - | chr4_1:1807362-1807381 | Msa0528840:intron | 45.0% | |
GAGTAAATAGATACCTGCGG+TGG | + | chr4_1:1807392-1807411 | None:intergenic | 45.0% | |
! | CCTTTTCCGGTCCAATAAGA+TGG | + | chr4_1:1807534-1807553 | None:intergenic | 45.0% |
CCATCTTATTGGACCGGAAA+AGG | - | chr4_1:1807531-1807550 | Msa0528840:intron | 45.0% | |
TGTAGACAAACCAAAGGAGG+AGG | - | chr4_1:1807670-1807689 | Msa0528840:intron | 45.0% | |
CACACTTTGTTCCCTCACAA+AGG | + | chr4_1:1807724-1807743 | None:intergenic | 45.0% | |
! | CTCTAAGAACTTATGCCCGA+GGG | + | chr4_1:1807867-1807886 | None:intergenic | 45.0% |
! | TCTCTAAGAACTTATGCCCG+AGG | + | chr4_1:1807868-1807887 | None:intergenic | 45.0% |
TACAAGCTGCAGGCATGTAA+TGG | - | chr4_1:1808174-1808193 | Msa0528840:intron | 45.0% | |
ACAAGCTGCAGGCATGTAAT+GGG | - | chr4_1:1808175-1808194 | Msa0528840:intron | 45.0% | |
GGGTTGTAATAATTGTGGCC+GGG | - | chr4_1:1808195-1808214 | Msa0528840:intron | 45.0% | |
CTCAAGGATCTTGGACTTTG+CGG | + | chr4_1:1808425-1808444 | None:intergenic | 45.0% | |
AGATCTCATCAATTTGCCGC+AGG | - | chr4_1:1808498-1808517 | Msa0528840:intron | 45.0% | |
AGCAGTCGGAATAAGAGAAG+GGG | + | chr4_1:1808534-1808553 | None:intergenic | 45.0% | |
TCAAGGCTTGCAATAGCAGT+CGG | + | chr4_1:1808548-1808567 | None:intergenic | 45.0% | |
CATTCAGGGTTCCAACATGA+TGG | + | chr4_1:1808807-1808826 | None:intergenic | 45.0% | |
TGGTTGTGTGATAACCAGCA+AGG | - | chr4_1:1808848-1808867 | Msa0528840:CDS | 45.0% | |
GGTTGTGTGATAACCAGCAA+GGG | - | chr4_1:1808849-1808868 | Msa0528840:CDS | 45.0% | |
TGAGGAGCTAGTATGCAAAG+CGG | + | chr4_1:1808896-1808915 | None:intergenic | 45.0% | |
TCCTCATTATCACGGCTCAT+GGG | - | chr4_1:1808910-1808929 | Msa0528840:exon | 45.0% | |
ACTGTTCAGAGACTCCATCT+GGG | + | chr4_1:1808950-1808969 | None:intergenic | 45.0% | |
!! | GGGTACCGATGCTTTCTTAT+TGG | + | chr4_1:1808977-1808996 | None:intergenic | 45.0% |
CTGAGATTAGTAGCACTAGG+GGG | + | chr4_1:1808997-1809016 | None:intergenic | 45.0% | |
!! | AGATATGGAAGCATCCCTTC+TGG | - | chr4_1:1809015-1809034 | Msa0528840:intron | 45.0% |
ATGCATACACCTTGACACTG+GGG | + | chr4_1:1809143-1809162 | None:intergenic | 45.0% | |
GCAATCCAAGCTGTATTCTG+AGG | + | chr4_1:1809336-1809355 | None:intergenic | 45.0% | |
TAGCCAGCTCTTCCATATCA+AGG | + | chr4_1:1809420-1809439 | None:intergenic | 45.0% | |
ATACATCCATGTCCATCCGA+GGG | + | chr4_1:1809492-1809511 | None:intergenic | 45.0% | |
AATACATCCATGTCCATCCG+AGG | + | chr4_1:1809493-1809512 | None:intergenic | 45.0% | |
TTCTCCTGCCTTGACAGAAA+GGG | - | chr4_1:1809585-1809604 | Msa0528840:five_prime_UTR | 45.0% | |
GGGATTACCTATTTGCCCTA+AGG | + | chr4_1:1809615-1809634 | None:intergenic | 45.0% | |
!!! | ACCAGCTGGTCTTTTCTCTT+GGG | + | chr4_1:1809635-1809654 | None:intergenic | 45.0% |
TATGAAGTCAAAGGACCAGC+TGG | + | chr4_1:1809649-1809668 | None:intergenic | 45.0% | |
!!! | AGAATTTTTTTTTTTTTTTT+TGG | - | chr4_1:1804609-1804628 | Msa0528840:three_prime_UTR | 5.0% |
CAAACACGAAAACGGCTCCT+TGG | + | chr4_1:1803991-1804010 | Msa0528830:intron | 50.0% | |
!! | CAAGGAGCCGTTTTCGTGTT+TGG | - | chr4_1:1803989-1804008 | Msa0528840:intron | 50.0% |
CTTGCAGGAAGTAGAATGGG+AGG | + | chr4_1:1804174-1804193 | Msa0528830:intron | 50.0% | |
! | CGTAGATGGGTTTGGTAGAC+GGG | - | chr4_1:1805253-1805272 | Msa0528840:CDS | 50.0% |
! | GTAGATGGGTTTGGTAGACG+GGG | - | chr4_1:1805254-1805273 | Msa0528840:CDS | 50.0% |
CGTGTCAGCTGAAATCTTGC+AGG | - | chr4_1:1805334-1805353 | Msa0528840:intron | 50.0% | |
!! | CTAAGAGTGTCCTGCAATGG+GGG | - | chr4_1:1805379-1805398 | Msa0528840:intron | 50.0% |
GTTCCGGAACAACCAATGTG+AGG | + | chr4_1:1805547-1805566 | None:intergenic | 50.0% | |
! | AATCCTTTTGGGCAGACCGT+AGG | - | chr4_1:1805576-1805595 | Msa0528840:intron | 50.0% |
ATACCTACGGTCTGCCCAAA+AGG | + | chr4_1:1805582-1805601 | None:intergenic | 50.0% | |
TTATTCTGGCAGTGGCTTCG+AGG | - | chr4_1:1805672-1805691 | Msa0528840:intron | 50.0% | |
GAAAAGTGGATACTCGACCC+TGG | - | chr4_1:1805777-1805796 | Msa0528840:intron | 50.0% | |
GAAGTGCACCACCTTGTGTT+TGG | + | chr4_1:1806264-1806283 | None:intergenic | 50.0% | |
GAGGGGTGAATTTAAGTGCC+TGG | + | chr4_1:1806361-1806380 | None:intergenic | 50.0% | |
!! | ATGGACATGCTGGCTTTCTC+AGG | - | chr4_1:1806461-1806480 | Msa0528840:CDS | 50.0% |
AAGAAGCCGAGGATCTCAAG+CGG | - | chr4_1:1806507-1806526 | Msa0528840:CDS | 50.0% | |
GTCTGAAGAAAGGAGATCCC+AGG | - | chr4_1:1806810-1806829 | Msa0528840:intron | 50.0% | |
GTGTCAAAGGACATAGACCC+TGG | + | chr4_1:1806831-1806850 | None:intergenic | 50.0% | |
GGGTCTATGTCCTTTGACAC+CGG | - | chr4_1:1806831-1806850 | Msa0528840:intron | 50.0% | |
TCTATGTCCTTTGACACCGG+AGG | - | chr4_1:1806834-1806853 | Msa0528840:intron | 50.0% | |
ATAACCAAGGCAGTCTCCTC+CGG | + | chr4_1:1806853-1806872 | None:intergenic | 50.0% | |
GCCTTGGTTATGCAAGCCTT+AGG | - | chr4_1:1806862-1806881 | Msa0528840:intron | 50.0% | |
!! | GCAAGCCTTAGGTTTTGACC+GGG | - | chr4_1:1806873-1806892 | Msa0528840:intron | 50.0% |
TGTCTCCCGGTCAAAACCTA+AGG | + | chr4_1:1806881-1806900 | None:intergenic | 50.0% | |
GCCATGTTCCCATCATAGGT+AGG | + | chr4_1:1807354-1807373 | None:intergenic | 50.0% | |
TAGCGCTCATGCAGGTATTC+CGG | - | chr4_1:1807497-1807516 | Msa0528840:intron | 50.0% | |
GTTTGTAGATGCTGTGCGAC+AGG | - | chr4_1:1807604-1807623 | Msa0528840:intron | 50.0% | |
!! | ACAAAGGCACTCATGAGGGT+TGG | + | chr4_1:1807708-1807727 | None:intergenic | 50.0% |
!! | CCTCACAAAGGCACTCATGA+GGG | + | chr4_1:1807712-1807731 | None:intergenic | 50.0% |
CCTCATGAGTGCCTTTGTGA+GGG | - | chr4_1:1807710-1807729 | Msa0528840:intron | 50.0% | |
CTGAAAATGGCTCCTTCCCT+CGG | - | chr4_1:1807848-1807867 | Msa0528840:intron | 50.0% | |
TGAAAATGGCTCCTTCCCTC+GGG | - | chr4_1:1807849-1807868 | Msa0528840:intron | 50.0% | |
AAGAACTTATGCCCGAGGGA+AGG | + | chr4_1:1807863-1807882 | None:intergenic | 50.0% | |
CATGCCTGCAGCTTGTAAAG+TGG | + | chr4_1:1808171-1808190 | None:intergenic | 50.0% | |
TCACATGCGTTCACCGTAGA+AGG | - | chr4_1:1808262-1808281 | Msa0528840:intron | 50.0% | |
! | GGTGAAAGTGGTGATGTCCT+TGG | + | chr4_1:1808404-1808423 | None:intergenic | 50.0% |
CTTGGACTTTGCGGTGAAAG+TGG | + | chr4_1:1808416-1808435 | None:intergenic | 50.0% | |
GAAAGGAGGCTCAAGGATCT+TGG | + | chr4_1:1808434-1808453 | None:intergenic | 50.0% | |
TGTGTGATAACCAGCAAGGG+CGG | - | chr4_1:1808852-1808871 | Msa0528840:CDS | 50.0% | |
CTCCTCATTATCACGGCTCA+TGG | - | chr4_1:1808909-1808928 | Msa0528840:exon | 50.0% | |
CTGTTCAGAGACTCCATCTG+GGG | + | chr4_1:1808949-1808968 | None:intergenic | 50.0% | |
CACTGTTCAGAGACTCCATC+TGG | + | chr4_1:1808951-1808970 | None:intergenic | 50.0% | |
! | GAAGCATCCCTTCTGGAAGA+GGG | - | chr4_1:1809022-1809041 | Msa0528840:intron | 50.0% |
ATAACCGCCCTCTTCCAGAA+GGG | + | chr4_1:1809032-1809051 | None:intergenic | 50.0% | |
TATAACCGCCCTCTTCCAGA+AGG | + | chr4_1:1809033-1809052 | None:intergenic | 50.0% | |
GTAGACGTTGCTGAGACCAA+TGG | + | chr4_1:1809087-1809106 | None:intergenic | 50.0% | |
! | AAGCAATGCAGAGTTGGCTC+TGG | + | chr4_1:1809199-1809218 | None:intergenic | 50.0% |
TTGCGCCTCAGAATACAGCT+TGG | - | chr4_1:1809328-1809347 | Msa0528840:five_prime_UTR | 50.0% | |
TACATCCATGTCCATCCGAG+GGG | + | chr4_1:1809491-1809510 | None:intergenic | 50.0% | |
TTCTGTCAAGGCAGGAGAAC+AGG | + | chr4_1:1809584-1809603 | None:intergenic | 50.0% | |
GTTCTCCTGCCTTGACAGAA+AGG | - | chr4_1:1809584-1809603 | Msa0528840:five_prime_UTR | 50.0% | |
TCTCCTGCCTTGACAGAAAG+GGG | - | chr4_1:1809586-1809605 | Msa0528840:five_prime_UTR | 50.0% | |
TCCCAAGAGAAAAGACCAGC+TGG | - | chr4_1:1809631-1809650 | Msa0528840:five_prime_UTR | 50.0% | |
!!! | GACCAGCTGGTCTTTTCTCT+TGG | + | chr4_1:1809636-1809655 | None:intergenic | 50.0% |
GAAGCTGGTGAATGAGGGTG+AGG | + | chr4_1:1803663-1803682 | Msa0528830:CDS | 55.0% | |
ACAACTCAACGGCCTCCTCA+AGG | - | chr4_1:1804126-1804145 | Msa0528840:intron | 55.0% | |
!! | GCTAACAGGAGGCATCTCCA+GGG | + | chr4_1:1805797-1805816 | None:intergenic | 55.0% |
!! | AGCTAACAGGAGGCATCTCC+AGG | + | chr4_1:1805798-1805817 | None:intergenic | 55.0% |
TGGAGATGCCTCCTGTTAGC+TGG | - | chr4_1:1805797-1805816 | Msa0528840:intron | 55.0% | |
CCTCATCCGCTTGAGATCCT+CGG | + | chr4_1:1806516-1806535 | None:intergenic | 55.0% | |
GCAGCCGGTGAGATTTATGG+TGG | - | chr4_1:1806913-1806932 | Msa0528840:intron | 55.0% | |
CCCTCATGAGTGCCTTTGTG+AGG | - | chr4_1:1807709-1807728 | Msa0528840:intron | 55.0% | |
!! | CCCTCACAAAGGCACTCATG+AGG | + | chr4_1:1807713-1807732 | None:intergenic | 55.0% |
GCAGGATCGCAAGCTGAAAG+AGG | + | chr4_1:1808582-1808601 | None:intergenic | 55.0% | |
! | GCCCATGAGCCGTGATAATG+AGG | + | chr4_1:1808914-1808933 | None:intergenic | 55.0% |
CACCTCAAGATGACCCCAGA+TGG | - | chr4_1:1808933-1808952 | Msa0528840:five_prime_UTR | 55.0% | |
! | CTCCATCTGGGGTCATCTTG+AGG | + | chr4_1:1808938-1808957 | None:intergenic | 55.0% |
!! | GGAAGCATCCCTTCTGGAAG+AGG | - | chr4_1:1809021-1809040 | Msa0528840:intron | 55.0% |
CTCGGATATCCCCAGTGTCA+AGG | - | chr4_1:1809131-1809150 | Msa0528840:five_prime_UTR | 55.0% | |
!! | GCAGAGTTGGCTCTGGACTA+TGG | + | chr4_1:1809192-1809211 | None:intergenic | 55.0% |
TCCTACCGTCGAAAACCCCT+CGG | - | chr4_1:1809473-1809492 | Msa0528840:five_prime_UTR | 55.0% | |
! | TCCATCCGAGGGGTTTTCGA+CGG | + | chr4_1:1809481-1809500 | None:intergenic | 55.0% |
GAAAACCCCTCGGATGGACA+TGG | - | chr4_1:1809483-1809502 | Msa0528840:five_prime_UTR | 55.0% | |
CTCCTGCCTTGACAGAAAGG+GGG | - | chr4_1:1809587-1809606 | Msa0528840:five_prime_UTR | 55.0% | |
AAGGAGCCCCCTTTCTGTCA+AGG | + | chr4_1:1809596-1809615 | None:intergenic | 55.0% | |
TGACAGAAAGGGGGCTCCTT+AGG | - | chr4_1:1809596-1809615 | Msa0528840:five_prime_UTR | 55.0% | |
GACAGAAAGGGGGCTCCTTA+GGG | - | chr4_1:1809597-1809616 | Msa0528840:five_prime_UTR | 55.0% | |
CTGTAGTCACTCTGGCACTG+TGG | - | chr4_1:1809680-1809699 | Msa0528840:five_prime_UTR | 55.0% | |
! | TCGCGAGAGGGGACCTTTTG+TGG | - | chr4_1:1806418-1806437 | Msa0528840:CDS | 60.0% |
CCGAGGATCTCAAGCGGATG+AGG | - | chr4_1:1806513-1806532 | Msa0528840:CDS | 60.0% | |
! | GCAGTCTCCTCCGGTGTCAA+AGG | + | chr4_1:1806844-1806863 | None:intergenic | 60.0% |
AACTTGTGGAAGGCCACCGC+AGG | - | chr4_1:1807376-1807395 | Msa0528840:intron | 60.0% | |
! | ACCAGCAAGGGCGGATTTGC+AGG | - | chr4_1:1808861-1808880 | Msa0528840:CDS | 60.0% |
! | GCATCCCTTCTGGAAGAGGG+CGG | - | chr4_1:1809025-1809044 | Msa0528840:intron | 60.0% |
! | TCCGAGGGGTTTTCGACGGT+AGG | + | chr4_1:1809477-1809496 | None:intergenic | 60.0% |
ACCGTCGAAAACCCCTCGGA+TGG | - | chr4_1:1809477-1809496 | Msa0528840:five_prime_UTR | 60.0% | |
AGCCCCCTTTCTGTCAAGGC+AGG | + | chr4_1:1809592-1809611 | None:intergenic | 60.0% | |
GGGGGCTCCTTAGGGCAAAT+AGG | - | chr4_1:1809605-1809624 | Msa0528840:five_prime_UTR | 60.0% | |
GACACCGGAGGAGACTGCCT+TGG | - | chr4_1:1806846-1806865 | Msa0528840:intron | 65.0% | |
GCCTGCAAATCCGCCCTTGC+TGG | + | chr4_1:1808865-1808884 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_1 | gene | 1803119 | 1809708 | 1803119 | ID=Msa0528840;Name=Msa0528840 |
chr4_1 | mRNA | 1803119 | 1809708 | 1803119 | ID=Msa0528840-mRNA-1;Parent=Msa0528840;Name=Msa0528840-mRNA-1;_AED=0.12;_eAED=0.12;_QI=717|1|1|1|0.7|0.54|11|1553|507 |
chr4_1 | exon | 1803119 | 1803245 | 1803119 | ID=Msa0528840-mRNA-1:exon:580;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1803375 | 1803984 | 1803375 | ID=Msa0528840-mRNA-1:exon:579;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1804227 | 1805316 | 1804227 | ID=Msa0528840-mRNA-1:exon:578;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1805430 | 1805587 | 1805430 | ID=Msa0528840-mRNA-1:exon:577;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1805849 | 1806053 | 1805849 | ID=Msa0528840-mRNA-1:exon:576;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1806293 | 1806582 | 1806293 | ID=Msa0528840-mRNA-1:exon:575;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1806981 | 1807143 | 1806981 | ID=Msa0528840-mRNA-1:exon:574;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1807230 | 1807318 | 1807230 | ID=Msa0528840-mRNA-1:exon:573;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1807404 | 1807471 | 1807404 | ID=Msa0528840-mRNA-1:exon:572;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1808635 | 1808987 | 1808635 | ID=Msa0528840-mRNA-1:exon:571;Parent=Msa0528840-mRNA-1 |
chr4_1 | exon | 1809068 | 1809708 | 1809068 | ID=Msa0528840-mRNA-1:exon:570;Parent=Msa0528840-mRNA-1 |
chr4_1 | five_prime_UTR | 1809068 | 1809708 | 1809068 | ID=Msa0528840-mRNA-1:five_prime_utr;Parent=Msa0528840-mRNA-1 |
chr4_1 | five_prime_UTR | 1808912 | 1808987 | 1808912 | ID=Msa0528840-mRNA-1:five_prime_utr;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1808635 | 1808911 | 1808635 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1807404 | 1807471 | 1807404 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1807230 | 1807318 | 1807230 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1806981 | 1807143 | 1806981 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1806293 | 1806582 | 1806293 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1805849 | 1806053 | 1805849 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1805430 | 1805587 | 1805430 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | CDS | 1805043 | 1805316 | 1805043 | ID=Msa0528840-mRNA-1:cds;Parent=Msa0528840-mRNA-1 |
chr4_1 | three_prime_UTR | 1804227 | 1805042 | 1804227 | ID=Msa0528840-mRNA-1:three_prime_utr;Parent=Msa0528840-mRNA-1 |
chr4_1 | three_prime_UTR | 1803375 | 1803984 | 1803375 | ID=Msa0528840-mRNA-1:three_prime_utr;Parent=Msa0528840-mRNA-1 |
chr4_1 | three_prime_UTR | 1803119 | 1803245 | 1803119 | ID=Msa0528840-mRNA-1:three_prime_utr;Parent=Msa0528840-mRNA-1 |
Gene Sequence |
Protein sequence |