AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0961220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0961220 MtrunA17_Chr6g0480021 89.720 321 15 1 1 321 1 303 0.0 587
Msa0961220 MtrunA17_Chr6g0480011 67.290 321 104 1 1 320 1 321 6.32e-162 454
Msa0961220 MtrunA17_Chr6g0479981 59.434 318 128 1 1 318 1 317 3.22e-144 409
Msa0961220 MtrunA17_Chr1g0173621 51.703 323 145 2 1 320 1 315 1.48e-114 333
Msa0961220 MtrunA17_Chr4g0036261 80.328 183 36 0 138 320 1 183 1.43e-107 311
Msa0961220 MtrunA17_Chr3g0121001 50.305 328 138 8 1 318 1 313 2.86e-104 308
Msa0961220 MtrunA17_Chr4g0036301 82.558 172 30 0 150 321 1 172 1.99e-102 297
Msa0961220 MtrunA17_Chr4g0036321 78.947 171 36 0 150 320 1 171 2.33e-95 280
Msa0961220 MtrunA17_Chr5g0447941 51.634 306 132 6 16 318 19 311 4.05e-94 281
Msa0961220 MtrunA17_Chr5g0447951 53.521 284 125 4 16 297 19 297 9.88e-94 281
Msa0961220 MtrunA17_Chr5g0447961 53.521 284 125 4 16 297 19 297 9.88e-94 281
Msa0961220 MtrunA17_Chr4g0018921 46.855 318 162 6 5 320 2 314 4.47e-93 279
Msa0961220 MtrunA17_Chr8g0368921 45.570 316 159 6 11 320 10 318 5.59e-88 266
Msa0961220 MtrunA17_Chr8g0368931 43.730 311 168 4 11 320 10 314 1.58e-82 252
Msa0961220 MtrunA17_Chr4g0009531 44.688 320 166 6 3 320 2 312 7.45e-81 248
Msa0961220 MtrunA17_Chr7g0239701 43.210 324 173 6 1 320 1 317 2.31e-80 247
Msa0961220 MtrunA17_Chr4g0009581 44.337 309 154 6 11 318 11 302 2.44e-73 228
Msa0961220 MtrunA17_Chr7g0243551 40.484 289 163 4 11 299 17 296 2.28e-64 205
Msa0961220 MtrunA17_Chr4g0036051 40.541 296 160 7 9 294 3 292 3.73e-59 192
Msa0961220 MtrunA17_Chr4g0036291 81.132 106 20 0 1 106 1 106 2.51e-57 180
Msa0961220 MtrunA17_Chr4g0036311 77.570 107 24 0 1 107 1 107 2.28e-56 178
Msa0961220 MtrunA17_Chr4g0009621 44.813 241 119 4 81 320 1 228 2.89e-53 174
Msa0961220 MtrunA17_Chr6g0479791 94.253 87 3 1 237 321 18 104 6.28e-52 166
Msa0961220 MtrunA17_Chr4g0036251 72.897 107 23 2 1 107 1 101 7.47e-50 161
Msa0961220 MtrunA17_Chr6g0479811 62.832 113 42 0 190 302 1 113 5.17e-48 157
Msa0961220 MtrunA17_Chr6g0479801 91.667 48 4 0 105 152 38 85 7.58e-27 101
Msa0961220 MtrunA17_Chr3g0095421 24.476 286 164 8 42 292 83 351 1.09e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0961220 AT1G59960.1 50.462 325 156 2 1 320 1 325 5.71e-121 351
Msa0961220 AT1G59950.1 52.131 305 145 1 17 320 15 319 3.61e-111 325
Msa0961220 AT2G37790.1 48.232 311 153 4 11 320 10 313 2.75e-97 290
Msa0961220 AT2G37770.2 48.397 312 152 5 11 320 10 314 8.69e-95 284
Msa0961220 AT3G53880.1 45.659 311 162 4 11 320 10 314 1.86e-89 270
Msa0961220 AT5G62420.1 45.687 313 162 7 11 320 8 315 4.74e-89 269
Msa0961220 AT2G37760.2 45.338 311 159 4 11 320 10 310 1.16e-86 263
Msa0961220 AT2G37760.1 45.338 311 159 4 11 320 10 310 1.16e-86 263
Msa0961220 AT2G37760.5 45.455 286 146 3 11 296 10 285 4.15e-80 245
Msa0961220 AT2G37760.4 44.948 287 148 3 11 297 10 286 1.15e-79 244
Msa0961220 AT2G37760.3 44.948 287 148 3 11 297 10 286 1.15e-79 244
Msa0961220 AT5G01670.1 40.938 320 177 7 2 318 9 319 1.51e-79 245
Msa0961220 AT3G53880.2 45.070 284 150 3 11 294 10 287 9.03e-79 243
Msa0961220 AT5G01670.2 37.752 347 177 8 2 318 9 346 1.63e-73 231
Msa0961220 AT2G37760.6 45.385 260 138 3 62 320 8 264 7.66e-71 221
Msa0961220 AT2G37760.7 45.385 260 138 3 62 320 8 264 7.66e-71 221
Msa0961220 AT2G21260.1 39.057 297 165 7 8 294 2 292 3.08e-65 208
Msa0961220 AT2G21250.1 38.047 297 168 7 8 294 2 292 1.38e-63 204
Msa0961220 AT2G37770.1 51.741 201 89 4 11 210 10 203 1.16e-61 198
Msa0961220 AT2G21250.2 39.241 237 128 7 8 234 2 232 2.48e-47 159
Msa0961220 AT2G21260.2 36.406 217 126 5 86 292 8 222 3.01e-40 141
Msa0961220 AT1G06690.1 25.795 283 156 9 46 292 98 362 1.27e-13 71.2
Msa0961220 AT1G60750.1 28.324 346 186 18 2 314 4 320 3.55e-12 66.6
Msa0961220 AT5G53580.1 23.571 280 161 9 42 285 80 342 9.25e-12 65.9

Find 95 sgRNAs with CRISPR-Local

Find 259 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGGAGCATACAAAGTATTT+TGG 0.154726 6_3:-82334365 Msa0961220:CDS
TTTCTTACATTGTTTGTATT+AGG 0.158919 6_3:-82335468 Msa0961220:five_prime_UTR
TGAAGCTCTCACTTCAATTT+TGG 0.164436 6_3:-82335131 Msa0961220:CDS
TTTATTTATGCAACACATTA+AGG 0.227807 6_3:-82335343 Msa0961220:five_prime_UTR
TCCACAATGCAGACTTTATA+AGG 0.257806 6_3:-82333765 Msa0961220:CDS
TTCTTACATTGTTTGTATTA+GGG 0.272137 6_3:-82335467 Msa0961220:five_prime_UTR
TTTGATACAGCTTCTATCTA+TGG 0.288397 6_3:-82335079 Msa0961220:CDS
TCGAATTGTTTAGGAATCTA+AGG 0.315799 6_3:-82334837 Msa0961220:intron
TCACCATTGATTCTGAGATA+TGG 0.324237 6_3:+82335270 None:intergenic
GATGGAGAACTCTATTCTTC+TGG 0.340422 6_3:-82334328 Msa0961220:CDS
GAAACTGAACCAAGAAGAAT+TGG 0.348726 6_3:-82333804 Msa0961220:CDS
ATAAAAGCTTGCTTGCCTAT+TGG 0.350884 6_3:-82335411 Msa0961220:five_prime_UTR
GGACCATGCATTTATCATCT+AGG 0.352476 6_3:-82335446 Msa0961220:five_prime_UTR
CATTTCGCCTGCAGTTAATC+AGG 0.352692 6_3:-82334602 Msa0961220:intron
ACTTTGAGTTTGATTCTTTG+AGG 0.354064 6_3:+82335299 None:intergenic
GTTACTAACACCAATAGATT+TGG 0.354709 6_3:+82334666 None:intergenic
CCATGAGGTGATACTAAATT+CGG 0.362220 6_3:-82335209 Msa0961220:CDS
CATGTTCCTTTGATATCAAA+TGG 0.366654 6_3:+82334724 None:intergenic
TTCTGCAACGAATGAGATAA+AGG 0.373223 6_3:+82333585 None:intergenic
GGGGAAAAGATGCCAGTAAT+AGG 0.379501 6_3:-82335187 Msa0961220:CDS
AAAACCTTGAAATATTTGAT+TGG 0.391571 6_3:-82333826 Msa0961220:CDS
GAAGTGAGAGCTTCATTTGA+TGG 0.392979 6_3:+82335139 None:intergenic
CTGATTAACTGCAGGCGAAA+TGG 0.409696 6_3:+82334603 None:intergenic
TGTATAAAAGACAGTCCAAT+AGG 0.410506 6_3:+82335396 None:intergenic
TTAGGCTTAGCCAAATCTAT+TGG 0.410561 6_3:-82334676 Msa0961220:CDS
AGTTTCCCTTGTTGCCATGA+TGG 0.413836 6_3:+82334438 None:intergenic
ATGGAAGACTGTTACAGATT+AGG 0.430151 6_3:-82334694 Msa0961220:CDS
TCAACAAATTACATTGTTCA+AGG 0.430793 6_3:+82333329 None:intergenic
GTTTCCAATCAAATATTTCA+AGG 0.435069 6_3:+82333822 None:intergenic
GCAGTTCCTAGGCCTATTAC+TGG 0.435239 6_3:+82335175 None:intergenic
TCTTGCAGATAGCACTAAGA+TGG 0.451601 6_3:-82333907 Msa0961220:intron
TCCTCTGCTTGACTAAATCT+AGG 0.457745 6_3:+82333367 None:intergenic
AAATGGACCTTACAAATCCT+TGG 0.461855 6_3:-82333723 Msa0961220:CDS
CATCCATATCTCAGAATCAA+TGG 0.463441 6_3:-82335273 Msa0961220:five_prime_UTR
TATTCTTCTGGAAATTGCTC+AGG 0.470924 6_3:-82334316 Msa0961220:CDS
GAGGAGATGTAGCAGTTCCT+AGG 0.470932 6_3:+82335164 None:intergenic
CAAAGGAACATGGGAAGCTA+TGG 0.471811 6_3:-82334713 Msa0961220:CDS
TGGATCTCTACTTGATTCAC+TGG 0.472213 6_3:-82334804 Msa0961220:CDS
TGAACTAACACTAGAAAAGA+TGG 0.475145 6_3:-82335245 Msa0961220:exon
AGCTCTTCCAAGGATTTGTA+AGG 0.476136 6_3:+82333716 None:intergenic
GTTGAAGGCTTTAACTTCAC+AGG 0.478558 6_3:-82334760 Msa0961220:CDS
AGAGCTTCATTTGATGGAAG+AGG 0.479484 6_3:+82335145 None:intergenic
TAGGAAGAAGAGTGTAGCTC+AGG 0.480111 6_3:-82334292 Msa0961220:intron
ACATCTTCTTTCAATCTCAC+TGG 0.482395 6_3:+82334781 None:intergenic
CATGAGGTGATACTAAATTC+GGG 0.484916 6_3:-82335208 Msa0961220:CDS
CATGGCAACAAGGGAAACTC+AGG 0.493453 6_3:-82334434 Msa0961220:CDS
GAATCTAAGGTTGGAGTATG+TGG 0.495354 6_3:-82334824 Msa0961220:CDS
TGTGTGTGCATGGTCACCAT+TGG 0.497595 6_3:-82334385 Msa0961220:CDS
ATTGTTTAGGAATCTAAGGT+TGG 0.498482 6_3:-82334833 Msa0961220:intron
CATTTGATATCAAAGGAACA+TGG 0.501156 6_3:-82334723 Msa0961220:CDS
GTGTGTGCATGGTCACCATT+GGG 0.511118 6_3:-82334384 Msa0961220:CDS
CTTTCACGCTGTGGATGCTA+TGG 0.515324 6_3:-82333482 Msa0961220:three_prime_UTR
GTGATTCCATTTGATATCAA+AGG 0.515819 6_3:-82334730 Msa0961220:CDS
GGTTGCATTGTCCAAGAGTA+CGG 0.517514 6_3:+82334624 None:intergenic
AGGGAATTCTGCATGAAGAA+AGG 0.520886 6_3:-82334414 Msa0961220:CDS
CAAATCCTTGGAAGAGCTGT+GGG 0.525762 6_3:-82333711 Msa0961220:CDS
AAGCATTGCAATTATATCAA+AGG 0.539099 6_3:+82333303 None:intergenic
GAGTTTGATTCTTTGAGGTG+TGG 0.541015 6_3:+82335304 None:intergenic
TCTTATACCTGATTAACTGC+AGG 0.543967 6_3:+82334595 None:intergenic
GACCATGCATTTATCATCTA+GGG 0.545482 6_3:-82335445 Msa0961220:five_prime_UTR
AGATTGAAAGAAGATGTTGA+AGG 0.547100 6_3:-82334775 Msa0961220:CDS
AAGATGCCAGTAATAGGCCT+AGG 0.550717 6_3:-82335181 Msa0961220:CDS
TTGGGGTTCTAATGCTGTGA+TGG 0.554067 6_3:-82334346 Msa0961220:CDS
TCCTAGATTTAGTCAAGCAG+AGG 0.557738 6_3:-82333368 Msa0961220:three_prime_UTR
GTGTCAAAAGCTTTAGAGAT+CGG 0.568756 6_3:-82335031 Msa0961220:CDS
AACAAGGTCATGGTGAGCAT+CGG 0.569974 6_3:+82334958 None:intergenic
CCGAATTTAGTATCACCTCA+TGG 0.575461 6_3:+82335209 None:intergenic
TTGGTTGATGCCATTCACAT+TGG 0.577773 6_3:-82335112 Msa0961220:CDS
ACCATCCCACAGCTCTTCCA+AGG 0.580081 6_3:+82333706 None:intergenic
ATGAATCCATCATGGCAACA+AGG 0.583038 6_3:-82334444 Msa0961220:CDS
ATGTCTGTAGCCAATGTGAA+TGG 0.585278 6_3:+82335102 None:intergenic
TTCTGGAAATTGCTCAGGCT+AGG 0.591523 6_3:-82334311 Msa0961220:CDS
AGGTAGAAATGAATCCATCA+TGG 0.594785 6_3:-82334452 Msa0961220:CDS
ACAAATCCTTGGAAGAGCTG+TGG 0.595019 6_3:-82333712 Msa0961220:CDS
TGAAAAGCTTCAACAAAGAG+AGG 0.595864 6_3:-82333856 Msa0961220:CDS
TTTGACACAGCTTGGCCTAG+AGG 0.596039 6_3:+82335046 None:intergenic
TGAATCCATCATGGCAACAA+GGG 0.596651 6_3:-82334443 Msa0961220:CDS
TCGGAAACTCTTTCACGCTG+TGG 0.600567 6_3:-82333491 Msa0961220:three_prime_UTR
ATTTGATATCAAAGGAACAT+GGG 0.604512 6_3:-82334722 Msa0961220:CDS
GCCTTATAAAGTCTGCATTG+TGG 0.609832 6_3:+82333764 None:intergenic
AGGCTTTAACTTCACAGGTG+AGG 0.611497 6_3:-82334755 Msa0961220:CDS
TTATGCAACACATTAAGGTG+TGG 0.613161 6_3:-82335338 Msa0961220:five_prime_UTR
GGCCCTAGATGATAAATGCA+TGG 0.614717 6_3:+82335443 None:intergenic
TATGGTACTGAAGAACCTCT+AGG 0.616094 6_3:-82335061 Msa0961220:CDS
AATACTTTGTATGCTCCCAA+TGG 0.618795 6_3:+82334369 None:intergenic
GAACAATGCTTACTTGAGGG+TGG 0.623073 6_3:+82334919 None:intergenic
AAGGAATTCATGTGTGTGCA+TGG 0.624563 6_3:-82334395 Msa0961220:CDS
GAGCATTGAGAACAAGGTCA+TGG 0.634564 6_3:+82334948 None:intergenic
ACTCATAATCAAAAGAGACA+TGG 0.647321 6_3:+82333400 None:intergenic
ATGAGGTGATACTAAATTCG+GGG 0.654424 6_3:-82335207 Msa0961220:CDS
TCCTTGGAAGAGCTGTGGGA+TGG 0.668107 6_3:-82333707 Msa0961220:CDS
ATGGCAACAAGGGAAACTCA+GGG 0.675053 6_3:-82334433 Msa0961220:CDS
TGAGGTGATACTAAATTCGG+GGG 0.676837 6_3:-82335206 Msa0961220:CDS
CTAAGATGGATACATGAGCA+AGG 0.686586 6_3:-82333893 Msa0961220:CDS
GGAAGCAACTAAACTCCATG+AGG 0.702832 6_3:-82335224 Msa0961220:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTACATATAAAAGATT+CGG - chr6_3:82335274-82335293 Msa0961220:five_prime_UTR 10.0%
!!! AATTTTACATATAAAAGATT+CGG - chr6_3:82335274-82335293 Msa0961220:five_prime_UTR 10.0%
!! AAAAATAACAAAATTAGAGA+AGG + chr6_3:82333924-82333943 None:intergenic 15.0%
!! AAAAATAACAAAATTAGAGA+AGG + chr6_3:82333924-82333943 None:intergenic 15.0%
!! TTTCTTACATTGTTTGTATT+AGG - chr6_3:82333316-82333335 Msa0961220:three_prime_UTR 20.0%
!! TTCTTACATTGTTTGTATTA+GGG - chr6_3:82333317-82333336 Msa0961220:three_prime_UTR 20.0%
!! TTTATTTATGCAACACATTA+AGG - chr6_3:82333441-82333460 Msa0961220:three_prime_UTR 20.0%
!!! ATTTTTTGTTCGAATTGTTT+AGG - chr6_3:82333938-82333957 Msa0961220:intron 20.0%
!! TGTTATAAAATTCACTCAAT+TGG - chr6_3:82334286-82334305 Msa0961220:intron 20.0%
!! ACCTTAAAATGTTAGATAAA+TGG - chr6_3:82334590-82334609 Msa0961220:intron 20.0%
!!! GCTTATACATAAGTAATTTT+AGG - chr6_3:82334820-82334839 Msa0961220:CDS 20.0%
!! AAAACCTTGAAATATTTGAT+TGG - chr6_3:82334958-82334977 Msa0961220:CDS 20.0%
!!! GAAATGTTTTTATCTGAAAA+TGG - chr6_3:82335044-82335063 Msa0961220:CDS 20.0%
!! TTTCTTACATTGTTTGTATT+AGG - chr6_3:82333316-82333335 Msa0961220:three_prime_UTR 20.0%
!! TTCTTACATTGTTTGTATTA+GGG - chr6_3:82333317-82333336 Msa0961220:three_prime_UTR 20.0%
!! TTTATTTATGCAACACATTA+AGG - chr6_3:82333441-82333460 Msa0961220:three_prime_UTR 20.0%
!!! ATTTTTTGTTCGAATTGTTT+AGG - chr6_3:82333938-82333957 Msa0961220:intron 20.0%
!! TGTTATAAAATTCACTCAAT+TGG - chr6_3:82334286-82334305 Msa0961220:intron 20.0%
!! ACCTTAAAATGTTAGATAAA+TGG - chr6_3:82334590-82334609 Msa0961220:intron 20.0%
!!! GCTTATACATAAGTAATTTT+AGG - chr6_3:82334820-82334839 Msa0961220:CDS 20.0%
!! AAAACCTTGAAATATTTGAT+TGG - chr6_3:82334958-82334977 Msa0961220:CDS 20.0%
!!! GAAATGTTTTTATCTGAAAA+TGG - chr6_3:82335044-82335063 Msa0961220:CDS 20.0%
!! TTTTCATCACTTCTAAGTTA+TGG - chr6_3:82333799-82333818 Msa0961220:CDS 25.0%
! ATTTGATATCAAAGGAACAT+GGG - chr6_3:82334062-82334081 Msa0961220:intron 25.0%
! AGCATTAACGTAATATTGAT+TGG + chr6_3:82334257-82334276 None:intergenic 25.0%
!! GCCATTTATCTAACATTTTA+AGG + chr6_3:82334594-82334613 None:intergenic 25.0%
! GTTTCCAATCAAATATTTCA+AGG + chr6_3:82334965-82334984 None:intergenic 25.0%
!! GATTTTGTGCAAGTTAAAAA+AGG + chr6_3:82335168-82335187 None:intergenic 25.0%
! TCAACAAATTACATTGTTCA+AGG + chr6_3:82335458-82335477 None:intergenic 25.0%
!! AAGCATTGCAATTATATCAA+AGG + chr6_3:82335484-82335503 None:intergenic 25.0%
!!! AAGTGAATGTTTCAAGTTTT+TGG + chr6_3:82333298-82333317 None:intergenic 25.0%
!! TTTTCATCACTTCTAAGTTA+TGG - chr6_3:82333799-82333818 Msa0961220:CDS 25.0%
! ATTTGATATCAAAGGAACAT+GGG - chr6_3:82334062-82334081 Msa0961220:intron 25.0%
! AGCATTAACGTAATATTGAT+TGG + chr6_3:82334257-82334276 None:intergenic 25.0%
!! GCCATTTATCTAACATTTTA+AGG + chr6_3:82334594-82334613 None:intergenic 25.0%
! GTTTCCAATCAAATATTTCA+AGG + chr6_3:82334965-82334984 None:intergenic 25.0%
!! GATTTTGTGCAAGTTAAAAA+AGG + chr6_3:82335168-82335187 None:intergenic 25.0%
! TCAACAAATTACATTGTTCA+AGG + chr6_3:82335458-82335477 None:intergenic 25.0%
!! AAGCATTGCAATTATATCAA+AGG + chr6_3:82335484-82335503 None:intergenic 25.0%
!! GCAAGCTTTTATTGACTATT+TGG + chr6_3:82333365-82333384 None:intergenic 30.0%
TGTATAAAAGACAGTCCAAT+AGG + chr6_3:82333391-82333410 None:intergenic 30.0%
! ACTGTCTTTTATACAACCTA+AGG - chr6_3:82333396-82333415 Msa0961220:three_prime_UTR 30.0%
! ACTTTGAGTTTGATTCTTTG+AGG + chr6_3:82333488-82333507 None:intergenic 30.0%
TGAACTAACACTAGAAAAGA+TGG - chr6_3:82333539-82333558 Msa0961220:three_prime_UTR 30.0%
TTTGATACAGCTTCTATCTA+TGG - chr6_3:82333705-82333724 Msa0961220:CDS 30.0%
!! CTGTGCAACTTTTTCTTTTA+AGG - chr6_3:82333887-82333906 Msa0961220:CDS 30.0%
TCGAATTGTTTAGGAATCTA+AGG - chr6_3:82333947-82333966 Msa0961220:intron 30.0%
! ATTGTTTAGGAATCTAAGGT+TGG - chr6_3:82333951-82333970 Msa0961220:intron 30.0%
AGATTGAAAGAAGATGTTGA+AGG - chr6_3:82334009-82334028 Msa0961220:intron 30.0%
GTGATTCCATTTGATATCAA+AGG - chr6_3:82334054-82334073 Msa0961220:intron 30.0%
CATGTTCCTTTGATATCAAA+TGG + chr6_3:82334063-82334082 None:intergenic 30.0%
CATTTGATATCAAAGGAACA+TGG - chr6_3:82334061-82334080 Msa0961220:intron 30.0%
GTTACTAACACCAATAGATT+TGG + chr6_3:82334121-82334140 None:intergenic 30.0%
! CATGTTGATTATCTCGATTT+AGG - chr6_3:82334312-82334331 Msa0961220:CDS 30.0%
!!! GGTTTTAGAACAGTTTGTTT+AGG + chr6_3:82334573-82334592 None:intergenic 30.0%
TACGAACATAAATACTTGTG+AGG - chr6_3:82334642-82334661 Msa0961220:CDS 30.0%
ATTGGAAACAGTTAATGACA+TGG - chr6_3:82334692-82334711 Msa0961220:CDS 30.0%
AAACAACAGTGAAGATCTTA+CGG + chr6_3:82334742-82334761 None:intergenic 30.0%
! TGATTTTGTCCAATTCTTCT+TGG + chr6_3:82334992-82335011 None:intergenic 30.0%
! CAATACAAGATTTTGCTCAA+GGG + chr6_3:82335106-82335125 None:intergenic 30.0%
! TCAATACAAGATTTTGCTCA+AGG + chr6_3:82335107-82335126 None:intergenic 30.0%
ACTCATAATCAAAAGAGACA+TGG + chr6_3:82335387-82335406 None:intergenic 30.0%
!! GCAAGCTTTTATTGACTATT+TGG + chr6_3:82333365-82333384 None:intergenic 30.0%
TGTATAAAAGACAGTCCAAT+AGG + chr6_3:82333391-82333410 None:intergenic 30.0%
! ACTGTCTTTTATACAACCTA+AGG - chr6_3:82333396-82333415 Msa0961220:three_prime_UTR 30.0%
! ACTTTGAGTTTGATTCTTTG+AGG + chr6_3:82333488-82333507 None:intergenic 30.0%
TGAACTAACACTAGAAAAGA+TGG - chr6_3:82333539-82333558 Msa0961220:three_prime_UTR 30.0%
TTTGATACAGCTTCTATCTA+TGG - chr6_3:82333705-82333724 Msa0961220:CDS 30.0%
!! CTGTGCAACTTTTTCTTTTA+AGG - chr6_3:82333887-82333906 Msa0961220:CDS 30.0%
TCGAATTGTTTAGGAATCTA+AGG - chr6_3:82333947-82333966 Msa0961220:intron 30.0%
! ATTGTTTAGGAATCTAAGGT+TGG - chr6_3:82333951-82333970 Msa0961220:intron 30.0%
AGATTGAAAGAAGATGTTGA+AGG - chr6_3:82334009-82334028 Msa0961220:intron 30.0%
GTGATTCCATTTGATATCAA+AGG - chr6_3:82334054-82334073 Msa0961220:intron 30.0%
CATGTTCCTTTGATATCAAA+TGG + chr6_3:82334063-82334082 None:intergenic 30.0%
CATTTGATATCAAAGGAACA+TGG - chr6_3:82334061-82334080 Msa0961220:intron 30.0%
GTTACTAACACCAATAGATT+TGG + chr6_3:82334121-82334140 None:intergenic 30.0%
! CATGTTGATTATCTCGATTT+AGG - chr6_3:82334312-82334331 Msa0961220:CDS 30.0%
!!! GGTTTTAGAACAGTTTGTTT+AGG + chr6_3:82334573-82334592 None:intergenic 30.0%
TACGAACATAAATACTTGTG+AGG - chr6_3:82334642-82334661 Msa0961220:CDS 30.0%
ATTGGAAACAGTTAATGACA+TGG - chr6_3:82334692-82334711 Msa0961220:CDS 30.0%
AAACAACAGTGAAGATCTTA+CGG + chr6_3:82334742-82334761 None:intergenic 30.0%
! TGATTTTGTCCAATTCTTCT+TGG + chr6_3:82334992-82335011 None:intergenic 30.0%
! CAATACAAGATTTTGCTCAA+GGG + chr6_3:82335106-82335125 None:intergenic 30.0%
! TCAATACAAGATTTTGCTCA+AGG + chr6_3:82335107-82335126 None:intergenic 30.0%
ACTCATAATCAAAAGAGACA+TGG + chr6_3:82335387-82335406 None:intergenic 30.0%
GACCATGCATTTATCATCTA+GGG - chr6_3:82333339-82333358 Msa0961220:three_prime_UTR 35.0%
! ATAAAAGCTTGCTTGCCTAT+TGG - chr6_3:82333373-82333392 Msa0961220:three_prime_UTR 35.0%
TTATGCAACACATTAAGGTG+TGG - chr6_3:82333446-82333465 Msa0961220:three_prime_UTR 35.0%
CATCCATATCTCAGAATCAA+TGG - chr6_3:82333511-82333530 Msa0961220:three_prime_UTR 35.0%
!! TCACCATTGATTCTGAGATA+TGG + chr6_3:82333517-82333536 None:intergenic 35.0%
CCATGAGGTGATACTAAATT+CGG - chr6_3:82333575-82333594 Msa0961220:three_prime_UTR 35.0%
CATGAGGTGATACTAAATTC+GGG - chr6_3:82333576-82333595 Msa0961220:three_prime_UTR 35.0%
ATGAGGTGATACTAAATTCG+GGG - chr6_3:82333577-82333596 Msa0961220:three_prime_UTR 35.0%
! TGAAGCTCTCACTTCAATTT+TGG - chr6_3:82333653-82333672 Msa0961220:three_prime_UTR 35.0%
!! GTGTCAAAAGCTTTAGAGAT+CGG - chr6_3:82333753-82333772 Msa0961220:CDS 35.0%
!!! CTTCATCGCGATTTTTTATG+AGG + chr6_3:82333779-82333798 None:intergenic 35.0%
!!! TTTTGAGAGCATTGAGAACA+AGG + chr6_3:82333845-82333864 None:intergenic 35.0%
ACAGAACAATGCTTACTTGA+GGG + chr6_3:82333871-82333890 None:intergenic 35.0%
ACATCTTCTTTCAATCTCAC+TGG + chr6_3:82334006-82334025 None:intergenic 35.0%
ATGGAAGACTGTTACAGATT+AGG - chr6_3:82334090-82334109 Msa0961220:intron 35.0%
TTAGGCTTAGCCAAATCTAT+TGG - chr6_3:82334108-82334127 Msa0961220:intron 35.0%
TCTTATACCTGATTAACTGC+AGG + chr6_3:82334192-82334211 None:intergenic 35.0%
AGGTAGAAATGAATCCATCA+TGG - chr6_3:82334332-82334351 Msa0961220:CDS 35.0%
AATACTTTGTATGCTCCCAA+TGG + chr6_3:82334418-82334437 None:intergenic 35.0%
!! TGGGAGCATACAAAGTATTT+TGG - chr6_3:82334419-82334438 Msa0961220:CDS 35.0%
!! GGGAGCATACAAAGTATTTT+GGG - chr6_3:82334420-82334439 Msa0961220:CDS 35.0%
!! GGAGCATACAAAGTATTTTG+GGG - chr6_3:82334421-82334440 Msa0961220:CDS 35.0%
! TATTCTTCTGGAAATTGCTC+AGG - chr6_3:82334468-82334487 Msa0961220:intron 35.0%
CTGCACTAAGAAATCTAAAG+AGG + chr6_3:82334616-82334635 None:intergenic 35.0%
TTATGACTTATGAGAGCTCA+TGG - chr6_3:82334669-82334688 Msa0961220:CDS 35.0%
TGAAAAGCTTCAACAAAGAG+AGG - chr6_3:82334928-82334947 Msa0961220:intron 35.0%
GAAACTGAACCAAGAAGAAT+TGG - chr6_3:82334980-82334999 Msa0961220:CDS 35.0%
TCCACAATGCAGACTTTATA+AGG - chr6_3:82335019-82335038 Msa0961220:CDS 35.0%
AAATGGACCTTACAAATCCT+TGG - chr6_3:82335061-82335080 Msa0961220:CDS 35.0%
TTCTGCAACGAATGAGATAA+AGG + chr6_3:82335202-82335221 None:intergenic 35.0%
GACCATGCATTTATCATCTA+GGG - chr6_3:82333339-82333358 Msa0961220:three_prime_UTR 35.0%
! ATAAAAGCTTGCTTGCCTAT+TGG - chr6_3:82333373-82333392 Msa0961220:three_prime_UTR 35.0%
TTATGCAACACATTAAGGTG+TGG - chr6_3:82333446-82333465 Msa0961220:three_prime_UTR 35.0%
CATCCATATCTCAGAATCAA+TGG - chr6_3:82333511-82333530 Msa0961220:three_prime_UTR 35.0%
!! TCACCATTGATTCTGAGATA+TGG + chr6_3:82333517-82333536 None:intergenic 35.0%
CCATGAGGTGATACTAAATT+CGG - chr6_3:82333575-82333594 Msa0961220:three_prime_UTR 35.0%
CATGAGGTGATACTAAATTC+GGG - chr6_3:82333576-82333595 Msa0961220:three_prime_UTR 35.0%
ATGAGGTGATACTAAATTCG+GGG - chr6_3:82333577-82333596 Msa0961220:three_prime_UTR 35.0%
! TGAAGCTCTCACTTCAATTT+TGG - chr6_3:82333653-82333672 Msa0961220:three_prime_UTR 35.0%
!! GTGTCAAAAGCTTTAGAGAT+CGG - chr6_3:82333753-82333772 Msa0961220:CDS 35.0%
!!! CTTCATCGCGATTTTTTATG+AGG + chr6_3:82333779-82333798 None:intergenic 35.0%
!!! TTTTGAGAGCATTGAGAACA+AGG + chr6_3:82333845-82333864 None:intergenic 35.0%
ACAGAACAATGCTTACTTGA+GGG + chr6_3:82333871-82333890 None:intergenic 35.0%
ACATCTTCTTTCAATCTCAC+TGG + chr6_3:82334006-82334025 None:intergenic 35.0%
ATGGAAGACTGTTACAGATT+AGG - chr6_3:82334090-82334109 Msa0961220:intron 35.0%
TTAGGCTTAGCCAAATCTAT+TGG - chr6_3:82334108-82334127 Msa0961220:intron 35.0%
TCTTATACCTGATTAACTGC+AGG + chr6_3:82334192-82334211 None:intergenic 35.0%
AGGTAGAAATGAATCCATCA+TGG - chr6_3:82334332-82334351 Msa0961220:CDS 35.0%
AATACTTTGTATGCTCCCAA+TGG + chr6_3:82334418-82334437 None:intergenic 35.0%
!! TGGGAGCATACAAAGTATTT+TGG - chr6_3:82334419-82334438 Msa0961220:CDS 35.0%
!! GGGAGCATACAAAGTATTTT+GGG - chr6_3:82334420-82334439 Msa0961220:CDS 35.0%
!! GGAGCATACAAAGTATTTTG+GGG - chr6_3:82334421-82334440 Msa0961220:CDS 35.0%
! TATTCTTCTGGAAATTGCTC+AGG - chr6_3:82334468-82334487 Msa0961220:intron 35.0%
CTGCACTAAGAAATCTAAAG+AGG + chr6_3:82334616-82334635 None:intergenic 35.0%
TTATGACTTATGAGAGCTCA+TGG - chr6_3:82334669-82334688 Msa0961220:CDS 35.0%
TGAAAAGCTTCAACAAAGAG+AGG - chr6_3:82334928-82334947 Msa0961220:intron 35.0%
GAAACTGAACCAAGAAGAAT+TGG - chr6_3:82334980-82334999 Msa0961220:CDS 35.0%
TCCACAATGCAGACTTTATA+AGG - chr6_3:82335019-82335038 Msa0961220:CDS 35.0%
AAATGGACCTTACAAATCCT+TGG - chr6_3:82335061-82335080 Msa0961220:CDS 35.0%
TTCTGCAACGAATGAGATAA+AGG + chr6_3:82335202-82335221 None:intergenic 35.0%
GGACCATGCATTTATCATCT+AGG - chr6_3:82333338-82333357 Msa0961220:three_prime_UTR 40.0%
! GATGACACATTTTACGCCTT+AGG + chr6_3:82333415-82333434 None:intergenic 40.0%
!! GAGTTTGATTCTTTGAGGTG+TGG + chr6_3:82333483-82333502 None:intergenic 40.0%
CCGAATTTAGTATCACCTCA+TGG + chr6_3:82333578-82333597 None:intergenic 40.0%
TGAGGTGATACTAAATTCGG+GGG - chr6_3:82333578-82333597 Msa0961220:three_prime_UTR 40.0%
AGAGCTTCATTTGATGGAAG+AGG + chr6_3:82333642-82333661 None:intergenic 40.0%
GAAGTGAGAGCTTCATTTGA+TGG + chr6_3:82333648-82333667 None:intergenic 40.0%
! TTGGTTGATGCCATTCACAT+TGG - chr6_3:82333672-82333691 Msa0961220:three_prime_UTR 40.0%
ATGTCTGTAGCCAATGTGAA+TGG + chr6_3:82333685-82333704 None:intergenic 40.0%
! TATGGTACTGAAGAACCTCT+AGG - chr6_3:82333723-82333742 Msa0961220:CDS 40.0%
! CTAAAGCTTTTGACACAGCT+TGG + chr6_3:82333749-82333768 None:intergenic 40.0%
CACAGAACAATGCTTACTTG+AGG + chr6_3:82333872-82333891 None:intergenic 40.0%
! GAATCTAAGGTTGGAGTATG+TGG - chr6_3:82333960-82333979 Msa0961220:intron 40.0%
TGGATCTCTACTTGATTCAC+TGG - chr6_3:82333980-82333999 Msa0961220:intron 40.0%
! GTTGAAGGCTTTAACTTCAC+AGG - chr6_3:82334024-82334043 Msa0961220:intron 40.0%
CAAAAAGCTTTCCGTACTCT+TGG - chr6_3:82334149-82334168 Msa0961220:intron 40.0%
ATGAATCCATCATGGCAACA+AGG - chr6_3:82334340-82334359 Msa0961220:CDS 40.0%
TGAATCCATCATGGCAACAA+GGG - chr6_3:82334341-82334360 Msa0961220:CDS 40.0%
AGGGAATTCTGCATGAAGAA+AGG - chr6_3:82334370-82334389 Msa0961220:CDS 40.0%
AAGGAATTCATGTGTGTGCA+TGG - chr6_3:82334389-82334408 Msa0961220:CDS 40.0%
GATGGAGAACTCTATTCTTC+TGG - chr6_3:82334456-82334475 Msa0961220:intron 40.0%
ACTTATGAGAGCTCATGGAT+TGG - chr6_3:82334674-82334693 Msa0961220:CDS 40.0%
TCTTGCAGATAGCACTAAGA+TGG - chr6_3:82334877-82334896 Msa0961220:intron 40.0%
CTAAGATGGATACATGAGCA+AGG - chr6_3:82334891-82334910 Msa0961220:intron 40.0%
GCCTTATAAAGTCTGCATTG+TGG + chr6_3:82335023-82335042 None:intergenic 40.0%
AGCTCTTCCAAGGATTTGTA+AGG + chr6_3:82335071-82335090 None:intergenic 40.0%
TCCTAGATTTAGTCAAGCAG+AGG - chr6_3:82335416-82335435 Msa0961220:five_prime_UTR 40.0%
TCCTCTGCTTGACTAAATCT+AGG + chr6_3:82335420-82335439 None:intergenic 40.0%
GGACCATGCATTTATCATCT+AGG - chr6_3:82333338-82333357 Msa0961220:three_prime_UTR 40.0%
! GATGACACATTTTACGCCTT+AGG + chr6_3:82333415-82333434 None:intergenic 40.0%
!! GAGTTTGATTCTTTGAGGTG+TGG + chr6_3:82333483-82333502 None:intergenic 40.0%
CCGAATTTAGTATCACCTCA+TGG + chr6_3:82333578-82333597 None:intergenic 40.0%
TGAGGTGATACTAAATTCGG+GGG - chr6_3:82333578-82333597 Msa0961220:three_prime_UTR 40.0%
AGAGCTTCATTTGATGGAAG+AGG + chr6_3:82333642-82333661 None:intergenic 40.0%
GAAGTGAGAGCTTCATTTGA+TGG + chr6_3:82333648-82333667 None:intergenic 40.0%
! TTGGTTGATGCCATTCACAT+TGG - chr6_3:82333672-82333691 Msa0961220:three_prime_UTR 40.0%
ATGTCTGTAGCCAATGTGAA+TGG + chr6_3:82333685-82333704 None:intergenic 40.0%
! TATGGTACTGAAGAACCTCT+AGG - chr6_3:82333723-82333742 Msa0961220:CDS 40.0%
! CTAAAGCTTTTGACACAGCT+TGG + chr6_3:82333749-82333768 None:intergenic 40.0%
CACAGAACAATGCTTACTTG+AGG + chr6_3:82333872-82333891 None:intergenic 40.0%
! GAATCTAAGGTTGGAGTATG+TGG - chr6_3:82333960-82333979 Msa0961220:intron 40.0%
TGGATCTCTACTTGATTCAC+TGG - chr6_3:82333980-82333999 Msa0961220:intron 40.0%
! GTTGAAGGCTTTAACTTCAC+AGG - chr6_3:82334024-82334043 Msa0961220:intron 40.0%
CAAAAAGCTTTCCGTACTCT+TGG - chr6_3:82334149-82334168 Msa0961220:intron 40.0%
ATGAATCCATCATGGCAACA+AGG - chr6_3:82334340-82334359 Msa0961220:CDS 40.0%
TGAATCCATCATGGCAACAA+GGG - chr6_3:82334341-82334360 Msa0961220:CDS 40.0%
AGGGAATTCTGCATGAAGAA+AGG - chr6_3:82334370-82334389 Msa0961220:CDS 40.0%
AAGGAATTCATGTGTGTGCA+TGG - chr6_3:82334389-82334408 Msa0961220:CDS 40.0%
GATGGAGAACTCTATTCTTC+TGG - chr6_3:82334456-82334475 Msa0961220:intron 40.0%
ACTTATGAGAGCTCATGGAT+TGG - chr6_3:82334674-82334693 Msa0961220:CDS 40.0%
TCTTGCAGATAGCACTAAGA+TGG - chr6_3:82334877-82334896 Msa0961220:intron 40.0%
CTAAGATGGATACATGAGCA+AGG - chr6_3:82334891-82334910 Msa0961220:intron 40.0%
GCCTTATAAAGTCTGCATTG+TGG + chr6_3:82335023-82335042 None:intergenic 40.0%
AGCTCTTCCAAGGATTTGTA+AGG + chr6_3:82335071-82335090 None:intergenic 40.0%
TCCTAGATTTAGTCAAGCAG+AGG - chr6_3:82335416-82335435 Msa0961220:five_prime_UTR 40.0%
TCCTCTGCTTGACTAAATCT+AGG + chr6_3:82335420-82335439 None:intergenic 40.0%
GGCCCTAGATGATAAATGCA+TGG + chr6_3:82333344-82333363 None:intergenic 45.0%
GGAAGCAACTAAACTCCATG+AGG - chr6_3:82333560-82333579 Msa0961220:three_prime_UTR 45.0%
GGGGAAAAGATGCCAGTAAT+AGG - chr6_3:82333597-82333616 Msa0961220:three_prime_UTR 45.0%
AAGATGCCAGTAATAGGCCT+AGG - chr6_3:82333603-82333622 Msa0961220:three_prime_UTR 45.0%
AACAAGGTCATGGTGAGCAT+CGG + chr6_3:82333829-82333848 None:intergenic 45.0%
!! GAGCATTGAGAACAAGGTCA+TGG + chr6_3:82333839-82333858 None:intergenic 45.0%
GAACAATGCTTACTTGAGGG+TGG + chr6_3:82333868-82333887 None:intergenic 45.0%
! AGGCTTTAACTTCACAGGTG+AGG - chr6_3:82334029-82334048 Msa0961220:intron 45.0%
CAAAGGAACATGGGAAGCTA+TGG - chr6_3:82334071-82334090 Msa0961220:intron 45.0%
GGTTGCATTGTCCAAGAGTA+CGG + chr6_3:82334163-82334182 None:intergenic 45.0%
CTGATTAACTGCAGGCGAAA+TGG + chr6_3:82334184-82334203 None:intergenic 45.0%
CATTTCGCCTGCAGTTAATC+AGG - chr6_3:82334182-82334201 Msa0961220:intron 45.0%
AGTTTCCCTTGTTGCCATGA+TGG + chr6_3:82334349-82334368 None:intergenic 45.0%
ATGGCAACAAGGGAAACTCA+GGG - chr6_3:82334351-82334370 Msa0961220:CDS 45.0%
! TTGGGGTTCTAATGCTGTGA+TGG - chr6_3:82334438-82334457 Msa0961220:CDS 45.0%
! TTCTGGAAATTGCTCAGGCT+AGG - chr6_3:82334473-82334492 Msa0961220:intron 45.0%
! TAGGAAGAAGAGTGTAGCTC+AGG - chr6_3:82334492-82334511 Msa0961220:intron 45.0%
ACAAATCCTTGGAAGAGCTG+TGG - chr6_3:82335072-82335091 Msa0961220:CDS 45.0%
CAAATCCTTGGAAGAGCTGT+GGG - chr6_3:82335073-82335092 Msa0961220:CDS 45.0%
GGCCCTAGATGATAAATGCA+TGG + chr6_3:82333344-82333363 None:intergenic 45.0%
GGAAGCAACTAAACTCCATG+AGG - chr6_3:82333560-82333579 Msa0961220:three_prime_UTR 45.0%
GGGGAAAAGATGCCAGTAAT+AGG - chr6_3:82333597-82333616 Msa0961220:three_prime_UTR 45.0%
AAGATGCCAGTAATAGGCCT+AGG - chr6_3:82333603-82333622 Msa0961220:three_prime_UTR 45.0%
AACAAGGTCATGGTGAGCAT+CGG + chr6_3:82333829-82333848 None:intergenic 45.0%
!! GAGCATTGAGAACAAGGTCA+TGG + chr6_3:82333839-82333858 None:intergenic 45.0%
GAACAATGCTTACTTGAGGG+TGG + chr6_3:82333868-82333887 None:intergenic 45.0%
! AGGCTTTAACTTCACAGGTG+AGG - chr6_3:82334029-82334048 Msa0961220:intron 45.0%
CAAAGGAACATGGGAAGCTA+TGG - chr6_3:82334071-82334090 Msa0961220:intron 45.0%
GGTTGCATTGTCCAAGAGTA+CGG + chr6_3:82334163-82334182 None:intergenic 45.0%
CTGATTAACTGCAGGCGAAA+TGG + chr6_3:82334184-82334203 None:intergenic 45.0%
CATTTCGCCTGCAGTTAATC+AGG - chr6_3:82334182-82334201 Msa0961220:intron 45.0%
AGTTTCCCTTGTTGCCATGA+TGG + chr6_3:82334349-82334368 None:intergenic 45.0%
ATGGCAACAAGGGAAACTCA+GGG - chr6_3:82334351-82334370 Msa0961220:CDS 45.0%
! TTGGGGTTCTAATGCTGTGA+TGG - chr6_3:82334438-82334457 Msa0961220:CDS 45.0%
! TTCTGGAAATTGCTCAGGCT+AGG - chr6_3:82334473-82334492 Msa0961220:intron 45.0%
! TAGGAAGAAGAGTGTAGCTC+AGG - chr6_3:82334492-82334511 Msa0961220:intron 45.0%
ACAAATCCTTGGAAGAGCTG+TGG - chr6_3:82335072-82335091 Msa0961220:CDS 45.0%
CAAATCCTTGGAAGAGCTGT+GGG - chr6_3:82335073-82335092 Msa0961220:CDS 45.0%
GCAGTTCCTAGGCCTATTAC+TGG + chr6_3:82333612-82333631 None:intergenic 50.0%
GAGGAGATGTAGCAGTTCCT+AGG + chr6_3:82333623-82333642 None:intergenic 50.0%
TTTGACACAGCTTGGCCTAG+AGG + chr6_3:82333741-82333760 None:intergenic 50.0%
CATGGCAACAAGGGAAACTC+AGG - chr6_3:82334350-82334369 Msa0961220:CDS 50.0%
TGTGTGTGCATGGTCACCAT+TGG - chr6_3:82334399-82334418 Msa0961220:CDS 50.0%
GTGTGTGCATGGTCACCATT+GGG - chr6_3:82334400-82334419 Msa0961220:CDS 50.0%
TCGGAAACTCTTTCACGCTG+TGG - chr6_3:82335293-82335312 Msa0961220:five_prime_UTR 50.0%
CTTTCACGCTGTGGATGCTA+TGG - chr6_3:82335302-82335321 Msa0961220:five_prime_UTR 50.0%
GCAGTTCCTAGGCCTATTAC+TGG + chr6_3:82333612-82333631 None:intergenic 50.0%
GAGGAGATGTAGCAGTTCCT+AGG + chr6_3:82333623-82333642 None:intergenic 50.0%
TTTGACACAGCTTGGCCTAG+AGG + chr6_3:82333741-82333760 None:intergenic 50.0%
CATGGCAACAAGGGAAACTC+AGG - chr6_3:82334350-82334369 Msa0961220:CDS 50.0%
TGTGTGTGCATGGTCACCAT+TGG - chr6_3:82334399-82334418 Msa0961220:CDS 50.0%
GTGTGTGCATGGTCACCATT+GGG - chr6_3:82334400-82334419 Msa0961220:CDS 50.0%
TCGGAAACTCTTTCACGCTG+TGG - chr6_3:82335293-82335312 Msa0961220:five_prime_UTR 50.0%
CTTTCACGCTGTGGATGCTA+TGG - chr6_3:82335302-82335321 Msa0961220:five_prime_UTR 50.0%
TCCTTGGAAGAGCTGTGGGA+TGG - chr6_3:82335077-82335096 Msa0961220:CDS 55.0%
ACCATCCCACAGCTCTTCCA+AGG + chr6_3:82335081-82335100 None:intergenic 55.0%
TCCTTGGAAGAGCTGTGGGA+TGG - chr6_3:82335077-82335096 Msa0961220:CDS 55.0%
ACCATCCCACAGCTCTTCCA+AGG + chr6_3:82335081-82335100 None:intergenic 55.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 82333296 82335510 82333296 ID=Msa0961220;Name=Msa0961220
chr6_3 mRNA 82333296 82335510 82333296 ID=Msa0961220-mRNA-1;Parent=Msa0961220;Name=Msa0961220-mRNA-1;_AED=0.29;_eAED=0.29;_QI=262|1|1|1|1|1|4|401|321
chr6_3 exon 82333296 82333921 82333296 ID=Msa0961220-mRNA-1:exon:14727;Parent=Msa0961220-mRNA-1
chr6_3 exon 82334293 82334472 82334293 ID=Msa0961220-mRNA-1:exon:14726;Parent=Msa0961220-mRNA-1
chr6_3 exon 82334603 82334846 82334603 ID=Msa0961220-mRNA-1:exon:14725;Parent=Msa0961220-mRNA-1
chr6_3 exon 82334932 82335510 82334932 ID=Msa0961220-mRNA-1:exon:14724;Parent=Msa0961220-mRNA-1
chr6_3 five_prime_UTR 82335249 82335510 82335249 ID=Msa0961220-mRNA-1:five_prime_utr;Parent=Msa0961220-mRNA-1
chr6_3 CDS 82334932 82335248 82334932 ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1
chr6_3 CDS 82334603 82334846 82334603 ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1
chr6_3 CDS 82334293 82334472 82334293 ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1
chr6_3 CDS 82333697 82333921 82333697 ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1
chr6_3 three_prime_UTR 82333296 82333696 82333296 ID=Msa0961220-mRNA-1:three_prime_utr;Parent=Msa0961220-mRNA-1
Gene Sequence

>Msa0961220

ATGGAAGCAACTAAACTCCATGAGGTGATACTAAATTCGGGGGAAAAGATGCCAGTAATAGGCCTAGGAACTGCTACATCTCCTCTTCCATCAAATGAAGCTCTCACTTCAATTTTGGTTGATGCCATTCACATTGGCTACAGACATTTTGATACAGCTTCTATCTATGGTACTGAAGAACCTCTAGGCCAAGCTGTGTCAAAAGCTTTAGAGATCGGCCTCATAAAAAATCGCGATGAAGTTTTCATCACTTCTAAGTTATGGTGCACCGATGCTCACCATGACCTTGTTCTCAATGCTCTCAAAACCACCCTCAAGAATCTAAGGTTGGAGTATGTGGATCTCTACTTGATTCACTGGCCAGTGAGATTGAAAGAAGATGTTGAAGGCTTTAACTTCACAGGTGAGGATGTGATTCCATTTGATATCAAAGGAACATGGGAAGCTATGGAAGACTGTTACAGATTAGGCTTAGCCAAATCTATTGGTGTTAGTAACTTTCGTATCAAAAAGCTTTCCGTACTCTTGGACAATGCAACCATTTCGCCTGCAGTTAATCAGGTAGAAATGAATCCATCATGGCAACAAGGGAAACTCAGGGAATTCTGCATGAAGAAAGGAATTCATGTGTGTGCATGGTCACCATTGGGAGCATACAAAGTATTTTGGGGTTCTAATGCTGTGATGGAGAACTCTATTCTTCTGGAAATTGCTCAGGCTAGGAAGAAGAGTGTAGCTCAGATAGCACTAAGATGGATACATGAGCAAGGAACAAGTGTAATTGTGAAAAGCTTCAACAAAGAGAGGATGAAACAAAACCTTGAAATATTTGATTGGAAACTGAACCAAGAAGAATTGGACAAAATCAATAAGATTCCACAATGCAGACTTTATAAGGCTGAAATGTTTTTATCTGAAAATGGACCTTACAAATCCTTGGAAGAGCTGTGGGATGGTGACCCTTGA

Protein sequence

>Msa0961220

MEATKLHEVILNSGEKMPVIGLGTATSPLPSNEALTSILVDAIHIGYRHFDTASIYGTEEPLGQAVSKALEIGLIKNRDEVFITSKLWCTDAHHDLVLNALKTTLKNLRLEYVDLYLIHWPVRLKEDVEGFNFTGEDVIPFDIKGTWEAMEDCYRLGLAKSIGVSNFRIKKLSVLLDNATISPAVNQVEMNPSWQQGKLREFCMKKGIHVCAWSPLGAYKVFWGSNAVMENSILLEIAQARKKSVAQIALRWIHEQGTSVIVKSFNKERMKQNLEIFDWKLNQEELDKINKIPQCRLYKAEMFLSENGPYKSLEELWDGDP*