Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961220 | sp|E7C196|MER_ERYCB | 63.636 | 319 | 109 | 1 | 9 | 320 | 8 | 326 | 1.14e-141 | 406 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961220 | A0A396HIG8 | 89.720 | 321 | 15 | 1 | 1 | 321 | 1 | 303 | 0.0 | 587 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0002690 | Msa0961220 | 0.807557 | 4.769526e-50 | -8.615850e-47 |
Msa0014970 | Msa0961220 | 0.830194 | 3.369631e-55 | -8.615850e-47 |
Msa0021710 | Msa0961220 | 0.813320 | 2.717222e-51 | -8.615850e-47 |
Msa0025060 | Msa0961220 | 0.811678 | 6.209211e-51 | -8.615850e-47 |
Msa0028450 | Msa0961220 | 0.821937 | 3.095493e-53 | -8.615850e-47 |
Msa0030760 | Msa0961220 | 0.800809 | 1.210792e-48 | -8.615850e-47 |
Msa0034800 | Msa0961220 | 0.809403 | 1.925327e-50 | -8.615850e-47 |
Msa0049670 | Msa0961220 | 0.804158 | 2.470132e-49 | -8.615850e-47 |
Msa0053360 | Msa0961220 | 0.823048 | 1.708024e-53 | -8.615850e-47 |
Msa0070580 | Msa0961220 | 0.801012 | 1.100422e-48 | -8.615850e-47 |
Msa0077990 | Msa0961220 | 0.800788 | 1.222947e-48 | -8.615850e-47 |
Msa0083200 | Msa0961220 | 0.816447 | 5.505039e-52 | -8.615850e-47 |
Msa0087130 | Msa0961220 | 0.803395 | 3.558525e-49 | -8.615850e-47 |
Msa0089410 | Msa0961220 | 0.809790 | 1.589652e-50 | -8.615850e-47 |
Msa0098750 | Msa0961220 | 0.814756 | 1.309780e-51 | -8.615850e-47 |
Msa0108500 | Msa0961220 | 0.819887 | 9.170607e-53 | -8.615850e-47 |
Msa0114960 | Msa0961220 | 0.827661 | 1.383370e-54 | -8.615850e-47 |
Msa0116950 | Msa0961220 | 0.814944 | 1.190301e-51 | -8.615850e-47 |
Msa0120310 | Msa0961220 | 0.809601 | 1.745464e-50 | -8.615850e-47 |
Msa0607620 | Msa0961220 | 0.814234 | 1.709283e-51 | -8.615850e-47 |
Msa0608940 | Msa0961220 | 0.816926 | 4.298434e-52 | -8.615850e-47 |
Msa0614060 | Msa0961220 | 0.828322 | 9.588137e-55 | -8.615850e-47 |
Msa0619480 | Msa0961220 | 0.830215 | 3.328679e-55 | -8.615850e-47 |
Msa0622800 | Msa0961220 | 0.825567 | 4.369705e-54 | -8.615850e-47 |
Msa0624360 | Msa0961220 | 0.804414 | 2.185614e-49 | -8.615850e-47 |
Msa0625550 | Msa0961220 | 0.803564 | 3.281908e-49 | -8.615850e-47 |
Msa0635070 | Msa0961220 | 0.847537 | 1.085842e-59 | -8.615850e-47 |
Msa0638550 | Msa0961220 | 0.834955 | 2.222227e-56 | -8.615850e-47 |
Msa0640780 | Msa0961220 | 0.831794 | 1.363992e-55 | -8.615850e-47 |
Msa0646180 | Msa0961220 | 0.800896 | 1.162209e-48 | -8.615850e-47 |
Msa0647860 | Msa0961220 | 0.807338 | 5.308649e-50 | -8.615850e-47 |
Msa0649530 | Msa0961220 | 0.804537 | 2.059906e-49 | -8.615850e-47 |
Msa0650860 | Msa0961220 | 0.804909 | 1.722178e-49 | -8.615850e-47 |
Msa0653500 | Msa0961220 | 0.811990 | 5.309729e-51 | -8.615850e-47 |
Msa0654500 | Msa0961220 | 0.803202 | 3.900572e-49 | -8.615850e-47 |
Msa0656570 | Msa0961220 | 0.816396 | 5.651100e-52 | -8.615850e-47 |
Msa0659640 | Msa0961220 | 0.820250 | 7.576037e-53 | -8.615850e-47 |
Msa0662140 | Msa0961220 | 0.831142 | 1.973684e-55 | -8.615850e-47 |
Msa0663580 | Msa0961220 | 0.804951 | 1.687876e-49 | -8.615850e-47 |
Msa0665010 | Msa0961220 | 0.834850 | 2.361149e-56 | -8.615850e-47 |
Msa0665040 | Msa0961220 | 0.829774 | 4.265528e-55 | -8.615850e-47 |
Msa0667710 | Msa0961220 | 0.815673 | 8.195245e-52 | -8.615850e-47 |
Msa0677110 | Msa0961220 | 0.800819 | 1.205193e-48 | -8.615850e-47 |
Msa0681100 | Msa0961220 | 0.804225 | 2.392321e-49 | -8.615850e-47 |
Msa0687320 | Msa0961220 | 0.851897 | 6.578674e-61 | -8.615850e-47 |
Msa0690580 | Msa0961220 | 0.802146 | 6.444206e-49 | -8.615850e-47 |
Msa0691180 | Msa0961220 | 0.813859 | 2.067292e-51 | -8.615850e-47 |
Msa0691740 | Msa0961220 | 0.810510 | 1.111915e-50 | -8.615850e-47 |
Msa0697230 | Msa0961220 | 0.851008 | 1.173585e-60 | -8.615850e-47 |
Msa0700870 | Msa0961220 | 0.823019 | 1.735317e-53 | -8.615850e-47 |
Msa0700930 | Msa0961220 | 0.825016 | 5.898687e-54 | -8.615850e-47 |
Msa0701460 | Msa0961220 | 0.800573 | 1.353005e-48 | -8.615850e-47 |
Msa0705130 | Msa0961220 | 0.814006 | 1.919445e-51 | -8.615850e-47 |
Msa0707870 | Msa0961220 | 0.834408 | 3.050201e-56 | -8.615850e-47 |
Msa0708840 | Msa0961220 | 0.820142 | 8.020889e-53 | -8.615850e-47 |
Msa0712580 | Msa0961220 | 0.816623 | 5.027597e-52 | -8.615850e-47 |
Msa0712670 | Msa0961220 | 0.802621 | 5.143782e-49 | -8.615850e-47 |
Msa0714060 | Msa0961220 | 0.848929 | 4.479017e-60 | -8.615850e-47 |
Msa0714200 | Msa0961220 | 0.855082 | 8.007316e-62 | -8.615850e-47 |
Msa0729590 | Msa0961220 | 0.806731 | 7.134830e-50 | -8.615850e-47 |
Msa0741710 | Msa0961220 | 0.803681 | 3.103407e-49 | -8.615850e-47 |
Msa0750490 | Msa0961220 | 0.832451 | 9.382748e-56 | -8.615850e-47 |
Msa0754790 | Msa0961220 | 0.822344 | 2.491260e-53 | -8.615850e-47 |
Msa0756440 | Msa0961220 | 0.827249 | 1.736611e-54 | -8.615850e-47 |
Msa0766880 | Msa0961220 | 0.812052 | 5.148222e-51 | -8.615850e-47 |
Msa0766910 | Msa0961220 | 0.803512 | 3.364835e-49 | -8.615850e-47 |
Msa0770540 | Msa0961220 | 0.815968 | 7.043017e-52 | -8.615850e-47 |
Msa0772160 | Msa0961220 | 0.819515 | 1.115346e-52 | -8.615850e-47 |
Msa0779830 | Msa0961220 | 0.800604 | 1.332913e-48 | -8.615850e-47 |
Msa0786330 | Msa0961220 | 0.812243 | 4.676849e-51 | -8.615850e-47 |
Msa0786600 | Msa0961220 | 0.822620 | 2.148441e-53 | -8.615850e-47 |
Msa0792840 | Msa0961220 | 0.802102 | 6.578202e-49 | -8.615850e-47 |
Msa0796610 | Msa0961220 | 0.815905 | 7.274894e-52 | -8.615850e-47 |
Msa0807840 | Msa0961220 | 0.812633 | 3.843526e-51 | -8.615850e-47 |
Msa0822680 | Msa0961220 | 0.834723 | 2.542131e-56 | -8.615850e-47 |
Msa0822800 | Msa0961220 | 0.832559 | 8.820601e-56 | -8.615850e-47 |
Msa0828730 | Msa0961220 | 0.829856 | 4.074036e-55 | -8.615850e-47 |
Msa0829770 | Msa0961220 | 0.827682 | 1.367441e-54 | -8.615850e-47 |
Msa0833360 | Msa0961220 | 0.802455 | 5.564198e-49 | -8.615850e-47 |
Msa0833910 | Msa0961220 | 0.848595 | 5.543610e-60 | -8.615850e-47 |
Msa0834160 | Msa0961220 | 0.834775 | 2.465856e-56 | -8.615850e-47 |
Msa0835550 | Msa0961220 | 0.823491 | 1.346190e-53 | -8.615850e-47 |
Msa0840450 | Msa0961220 | 0.805498 | 1.296680e-49 | -8.615850e-47 |
Msa0121080 | Msa0961220 | 0.808353 | 3.228682e-50 | -8.615850e-47 |
Msa0124070 | Msa0961220 | 0.814521 | 1.477106e-51 | -8.615850e-47 |
Msa0132920 | Msa0961220 | 0.832679 | 8.236912e-56 | -8.615850e-47 |
Msa0136520 | Msa0961220 | 0.824966 | 6.061317e-54 | -8.615850e-47 |
Msa0138380 | Msa0961220 | 0.852189 | 5.436098e-61 | -8.615850e-47 |
Msa0143210 | Msa0961220 | 0.816386 | 5.679826e-52 | -8.615850e-47 |
Msa0156780 | Msa0961220 | 0.848868 | 4.659742e-60 | -8.615850e-47 |
Msa0160080 | Msa0961220 | 0.822008 | 2.979850e-53 | -8.615850e-47 |
Msa0160470 | Msa0961220 | 0.812767 | 3.592871e-51 | -8.615850e-47 |
Msa0166580 | Msa0961220 | 0.803042 | 4.210998e-49 | -8.615850e-47 |
Msa0168470 | Msa0961220 | 0.811585 | 6.504635e-51 | -8.615850e-47 |
Msa0170690 | Msa0961220 | 0.834102 | 3.638658e-56 | -8.615850e-47 |
Msa0170730 | Msa0961220 | 0.809873 | 1.525411e-50 | -8.615850e-47 |
Msa0175480 | Msa0961220 | 0.801210 | 1.002594e-48 | -8.615850e-47 |
Msa0177570 | Msa0961220 | 0.803157 | 3.986320e-49 | -8.615850e-47 |
Msa0178440 | Msa0961220 | 0.809570 | 1.772966e-50 | -8.615850e-47 |
Msa0183960 | Msa0961220 | 0.804243 | 2.372509e-49 | -8.615850e-47 |
Msa0186380 | Msa0961220 | 0.808976 | 2.377211e-50 | -8.615850e-47 |
Msa0190470 | Msa0961220 | 0.816703 | 4.823200e-52 | -8.615850e-47 |
Msa0194420 | Msa0961220 | 0.820619 | 6.231886e-53 | -8.615850e-47 |
Msa0195140 | Msa0961220 | 0.817353 | 3.445424e-52 | -8.615850e-47 |
Msa0197600 | Msa0961220 | 0.800412 | 1.458728e-48 | -8.615850e-47 |
Msa0201910 | Msa0961220 | 0.819526 | 1.108721e-52 | -8.615850e-47 |
Msa0206600 | Msa0961220 | 0.816654 | 4.946832e-52 | -8.615850e-47 |
Msa0219720 | Msa0961220 | 0.827473 | 1.534800e-54 | -8.615850e-47 |
Msa0225050 | Msa0961220 | 0.805531 | 1.276543e-49 | -8.615850e-47 |
Msa0226580 | Msa0961220 | 0.802269 | 6.077269e-49 | -8.615850e-47 |
Msa0227970 | Msa0961220 | 0.800717 | 1.264269e-48 | -8.615850e-47 |
Msa0228360 | Msa0961220 | 0.810607 | 1.059596e-50 | -8.615850e-47 |
Msa0232660 | Msa0961220 | 0.827329 | 1.661105e-54 | -8.615850e-47 |
Msa0365350 | Msa0961220 | 0.823286 | 1.503292e-53 | -8.615850e-47 |
Msa0367310 | Msa0961220 | 0.815707 | 8.054050e-52 | -8.615850e-47 |
Msa0370350 | Msa0961220 | 0.808833 | 2.550429e-50 | -8.615850e-47 |
Msa0372550 | Msa0961220 | 0.809825 | 1.562481e-50 | -8.615850e-47 |
Msa0375930 | Msa0961220 | 0.816525 | 5.287758e-52 | -8.615850e-47 |
Msa0377690 | Msa0961220 | 0.855734 | 5.170696e-62 | -8.615850e-47 |
Msa0385870 | Msa0961220 | 0.806996 | 6.270935e-50 | -8.615850e-47 |
Msa0386390 | Msa0961220 | 0.806808 | 6.871104e-50 | -8.615850e-47 |
Msa0404880 | Msa0961220 | 0.824179 | 9.286078e-54 | -8.615850e-47 |
Msa0408490 | Msa0961220 | 0.844359 | 7.937698e-59 | -8.615850e-47 |
Msa0415210 | Msa0961220 | 0.814349 | 1.612376e-51 | -8.615850e-47 |
Msa0416430 | Msa0961220 | 0.800103 | 1.685802e-48 | -8.615850e-47 |
Msa0417850 | Msa0961220 | 0.806209 | 9.190670e-50 | -8.615850e-47 |
Msa0417910 | Msa0961220 | 0.818225 | 2.190077e-52 | -8.615850e-47 |
Msa0420280 | Msa0961220 | 0.840770 | 7.117693e-58 | -8.615850e-47 |
Msa0424570 | Msa0961220 | 0.815288 | 9.983768e-52 | -8.615850e-47 |
Msa0426680 | Msa0961220 | 0.837590 | 4.752683e-57 | -8.615850e-47 |
Msa0426860 | Msa0961220 | 0.810363 | 1.196578e-50 | -8.615850e-47 |
Msa0426890 | Msa0961220 | 0.815834 | 7.545739e-52 | -8.615850e-47 |
Msa0440720 | Msa0961220 | 0.806826 | 6.813337e-50 | -8.615850e-47 |
Msa0443250 | Msa0961220 | 0.831394 | 1.711172e-55 | -8.615850e-47 |
Msa0450890 | Msa0961220 | 0.816683 | 4.872316e-52 | -8.615850e-47 |
Msa0469770 | Msa0961220 | 0.813600 | 2.357919e-51 | -8.615850e-47 |
Msa0469840 | Msa0961220 | 0.823183 | 1.589074e-53 | -8.615850e-47 |
Msa0478730 | Msa0961220 | 0.802122 | 6.516525e-49 | -8.615850e-47 |
Msa0479790 | Msa0961220 | 0.806349 | 8.588704e-50 | -8.615850e-47 |
Msa0481580 | Msa0961220 | 0.828687 | 7.828548e-55 | -8.615850e-47 |
Msa0240290 | Msa0961220 | 0.804418 | 2.181290e-49 | -8.615850e-47 |
Msa0240460 | Msa0961220 | 0.854912 | 8.973114e-62 | -8.615850e-47 |
Msa0243160 | Msa0961220 | 0.845502 | 3.902512e-59 | -8.615850e-47 |
Msa0244370 | Msa0961220 | 0.830540 | 2.773040e-55 | -8.615850e-47 |
Msa0249670 | Msa0961220 | 0.822847 | 1.902966e-53 | -8.615850e-47 |
Msa0256170 | Msa0961220 | 0.805777 | 1.133020e-49 | -8.615850e-47 |
Msa0260930 | Msa0961220 | 0.857470 | 1.596571e-62 | -8.615850e-47 |
Msa0273780 | Msa0961220 | 0.808445 | 3.085997e-50 | -8.615850e-47 |
Msa0278080 | Msa0961220 | 0.812964 | 3.252804e-51 | -8.615850e-47 |
Msa0282880 | Msa0961220 | 0.823449 | 1.377086e-53 | -8.615850e-47 |
Msa0285510 | Msa0961220 | 0.800331 | 1.515338e-48 | -8.615850e-47 |
Msa0292060 | Msa0961220 | 0.808141 | 3.583768e-50 | -8.615850e-47 |
Msa0292150 | Msa0961220 | 0.806703 | 7.232810e-50 | -8.615850e-47 |
Msa0298590 | Msa0961220 | 0.826695 | 2.356072e-54 | -8.615850e-47 |
Msa0308300 | Msa0961220 | 0.813812 | 2.118075e-51 | -8.615850e-47 |
Msa0314980 | Msa0961220 | 0.829347 | 5.417205e-55 | -8.615850e-47 |
Msa0317630 | Msa0961220 | 0.813506 | 2.473277e-51 | -8.615850e-47 |
Msa0321180 | Msa0961220 | 0.823900 | 1.079568e-53 | -8.615850e-47 |
Msa0321200 | Msa0961220 | 0.831220 | 1.888542e-55 | -8.615850e-47 |
Msa0327870 | Msa0961220 | 0.808909 | 2.456138e-50 | -8.615850e-47 |
Msa0330240 | Msa0961220 | 0.814031 | 1.894504e-51 | -8.615850e-47 |
Msa0330770 | Msa0961220 | 0.802197 | 6.289791e-49 | -8.615850e-47 |
Msa0335860 | Msa0961220 | 0.832892 | 7.292544e-56 | -8.615850e-47 |
Msa0336550 | Msa0961220 | 0.821575 | 3.753567e-53 | -8.615850e-47 |
Msa0351600 | Msa0961220 | 0.804698 | 1.906584e-49 | -8.615850e-47 |
Msa0358720 | Msa0961220 | 0.826228 | 3.043096e-54 | -8.615850e-47 |
Msa0361040 | Msa0961220 | 0.878624 | 2.416580e-69 | -8.615850e-47 |
Msa0483090 | Msa0961220 | 0.831022 | 2.112399e-55 | -8.615850e-47 |
Msa0486850 | Msa0961220 | 0.800785 | 1.224636e-48 | -8.615850e-47 |
Msa0498320 | Msa0961220 | 0.806574 | 7.700401e-50 | -8.615850e-47 |
Msa0501540 | Msa0961220 | 0.834955 | 2.222036e-56 | -8.615850e-47 |
Msa0504360 | Msa0961220 | 0.826122 | 3.225360e-54 | -8.615850e-47 |
Msa0504640 | Msa0961220 | 0.809264 | 2.062136e-50 | -8.615850e-47 |
Msa0508620 | Msa0961220 | 0.803331 | 3.668369e-49 | -8.615850e-47 |
Msa0508660 | Msa0961220 | 0.805364 | 1.383225e-49 | -8.615850e-47 |
Msa0513500 | Msa0961220 | 0.802517 | 5.404600e-49 | -8.615850e-47 |
Msa0515400 | Msa0961220 | 0.841248 | 5.332632e-58 | -8.615850e-47 |
Msa0515420 | Msa0961220 | 0.833458 | 5.272699e-56 | -8.615850e-47 |
Msa0515830 | Msa0961220 | 0.810773 | 9.755500e-51 | -8.615850e-47 |
Msa0516000 | Msa0961220 | 0.817278 | 3.582067e-52 | -8.615850e-47 |
Msa0523400 | Msa0961220 | 0.808886 | 2.484058e-50 | -8.615850e-47 |
Msa0530220 | Msa0961220 | 0.804052 | 2.599804e-49 | -8.615850e-47 |
Msa0530250 | Msa0961220 | 0.820528 | 6.541446e-53 | -8.615850e-47 |
Msa0532910 | Msa0961220 | 0.815753 | 7.864387e-52 | -8.615850e-47 |
Msa0540120 | Msa0961220 | 0.813324 | 2.711972e-51 | -8.615850e-47 |
Msa0555510 | Msa0961220 | 0.829240 | 5.750278e-55 | -8.615850e-47 |
Msa0558160 | Msa0961220 | 0.805466 | 1.317041e-49 | -8.615850e-47 |
Msa0558800 | Msa0961220 | 0.821462 | 3.986416e-53 | -8.615850e-47 |
Msa0559440 | Msa0961220 | 0.810902 | 9.150528e-51 | -8.615850e-47 |
Msa0560010 | Msa0961220 | 0.822398 | 2.420670e-53 | -8.615850e-47 |
Msa0564580 | Msa0961220 | 0.807718 | 4.407945e-50 | -8.615850e-47 |
Msa0569630 | Msa0961220 | 0.833010 | 6.817983e-56 | -8.615850e-47 |
Msa0570310 | Msa0961220 | 0.803483 | 3.412258e-49 | -8.615850e-47 |
Msa0571220 | Msa0961220 | 0.812822 | 3.494271e-51 | -8.615850e-47 |
Msa0574230 | Msa0961220 | 0.840251 | 9.728865e-58 | -8.615850e-47 |
Msa0576510 | Msa0961220 | 0.846089 | 2.704000e-59 | -8.615850e-47 |
Msa0577960 | Msa0961220 | 0.800611 | 1.328930e-48 | -8.615850e-47 |
Msa0587060 | Msa0961220 | 0.828387 | 9.247713e-55 | -8.615850e-47 |
Msa0587070 | Msa0961220 | 0.803617 | 3.199804e-49 | -8.615850e-47 |
Msa0597300 | Msa0961220 | 0.818821 | 1.604555e-52 | -8.615850e-47 |
Msa0601470 | Msa0961220 | 0.813702 | 2.239122e-51 | -8.615850e-47 |
Msa0866510 | Msa0961220 | 0.811087 | 8.344647e-51 | -8.615850e-47 |
Msa0872800 | Msa0961220 | 0.836341 | 9.906170e-57 | -8.615850e-47 |
Msa0873070 | Msa0961220 | 0.851206 | 1.032047e-60 | -8.615850e-47 |
Msa0876030 | Msa0961220 | 0.821652 | 3.603993e-53 | -8.615850e-47 |
Msa0878090 | Msa0961220 | 0.805636 | 1.213127e-49 | -8.615850e-47 |
Msa0880370 | Msa0961220 | 0.844144 | 9.070353e-59 | -8.615850e-47 |
Msa0883880 | Msa0961220 | 0.827580 | 1.446170e-54 | -8.615850e-47 |
Msa0894580 | Msa0961220 | 0.818539 | 1.859870e-52 | -8.615850e-47 |
Msa0895860 | Msa0961220 | 0.814277 | 1.672458e-51 | -8.615850e-47 |
Msa0899080 | Msa0961220 | 0.864354 | 1.292001e-64 | -8.615850e-47 |
Msa0906310 | Msa0961220 | 0.815068 | 1.117248e-51 | -8.615850e-47 |
Msa0907520 | Msa0961220 | 0.800782 | 1.226463e-48 | -8.615850e-47 |
Msa0927890 | Msa0961220 | 0.850541 | 1.588686e-60 | -8.615850e-47 |
Msa0928840 | Msa0961220 | 0.827270 | 1.716129e-54 | -8.615850e-47 |
Msa0932040 | Msa0961220 | 0.822682 | 2.079216e-53 | -8.615850e-47 |
Msa0941320 | Msa0961220 | 0.836913 | 7.079784e-57 | -8.615850e-47 |
Msa0943870 | Msa0961220 | 0.804397 | 2.202675e-49 | -8.615850e-47 |
Msa0948820 | Msa0961220 | 0.817899 | 2.595480e-52 | -8.615850e-47 |
Msa0961200 | Msa0961220 | 0.862232 | 5.862457e-64 | -8.615850e-47 |
Msa0961220 | Msa0967250 | 0.822925 | 1.824816e-53 | -8.615850e-47 |
Msa0961220 | Msa0967260 | 0.837207 | 5.957794e-57 | -8.615850e-47 |
Msa0961220 | Msa0967920 | 0.801567 | 8.471138e-49 | -8.615850e-47 |
Msa0961220 | Msa0968970 | 0.812466 | 4.180632e-51 | -8.615850e-47 |
Msa0961220 | Msa0970160 | 0.820939 | 5.262652e-53 | -8.615850e-47 |
Msa0961220 | Msa0975460 | 0.844181 | 8.863960e-59 | -8.615850e-47 |
Msa0961220 | Msa0978290 | 0.831904 | 1.281397e-55 | -8.615850e-47 |
Msa0961220 | Msa0978440 | 0.802005 | 6.889340e-49 | -8.615850e-47 |
Msa0961220 | Msa0995660 | 0.807219 | 5.626032e-50 | -8.615850e-47 |
Msa0961220 | Msa0998940 | 0.876624 | 1.204410e-68 | -8.615850e-47 |
Msa0961220 | Msa1016450 | 0.804316 | 2.290159e-49 | -8.615850e-47 |
Msa0961220 | Msa1019370 | 0.813073 | 3.078686e-51 | -8.615850e-47 |
Msa0961220 | Msa1021600 | 0.811851 | 5.691975e-51 | -8.615850e-47 |
Msa0961220 | Msa1038040 | 0.824507 | 7.775163e-54 | -8.615850e-47 |
Msa0961220 | Msa1038570 | 0.830031 | 3.692899e-55 | -8.615850e-47 |
Msa0961220 | Msa1038610 | 0.823678 | 1.217298e-53 | -8.615850e-47 |
Msa0961220 | Msa1039150 | 0.811721 | 6.075208e-51 | -8.615850e-47 |
Msa0961220 | Msa1040030 | 0.810806 | 9.596859e-51 | -8.615850e-47 |
Msa0961220 | Msa1044050 | 0.806914 | 6.525936e-50 | -8.615850e-47 |
Msa0961220 | Msa1061130 | 0.827884 | 1.222445e-54 | -8.615850e-47 |
Msa0961220 | Msa1066790 | 0.804371 | 2.230276e-49 | -8.615850e-47 |
Msa0961220 | Msa1066980 | 0.812634 | 3.841420e-51 | -8.615850e-47 |
Msa0961220 | Msa1068110 | 0.802164 | 6.389212e-49 | -8.615850e-47 |
Msa0961220 | Msa1070930 | 0.808809 | 2.580325e-50 | -8.615850e-47 |
Msa0961220 | Msa1073140 | 0.825548 | 4.413747e-54 | -8.615850e-47 |
Msa0961220 | Msa1083660 | 0.809762 | 1.611881e-50 | -8.615850e-47 |
Msa0961220 | Msa1083850 | 0.816126 | 6.495162e-52 | -8.615850e-47 |
Msa0961220 | Msa1090020 | 0.852179 | 5.471849e-61 | -8.615850e-47 |
Msa0961220 | Msa1098470 | 0.833044 | 6.687068e-56 | -8.615850e-47 |
Msa0961220 | Msa1105680 | 0.819962 | 8.814573e-53 | -8.615850e-47 |
Msa0961220 | Msa1106730 | 0.800051 | 1.727553e-48 | -8.615850e-47 |
Msa0961220 | Msa1121580 | 0.815939 | 7.147291e-52 | -8.615850e-47 |
Msa0961220 | Msa1124180 | 0.806325 | 8.689805e-50 | -8.615850e-47 |
Msa0961220 | Msa1125610 | 0.807499 | 4.905557e-50 | -8.615850e-47 |
Msa0961220 | Msa1127530 | 0.814855 | 1.245753e-51 | -8.615850e-47 |
Msa0961220 | Msa1129160 | 0.828012 | 1.138541e-54 | -8.615850e-47 |
Msa0961220 | Msa1130070 | 0.800490 | 1.406190e-48 | -8.615850e-47 |
Msa0961220 | Msa1147870 | 0.809927 | 1.485532e-50 | -8.615850e-47 |
Msa0961220 | Msa1148970 | 0.800060 | 1.720353e-48 | -8.615850e-47 |
Msa0961220 | Msa1158540 | 0.802398 | 5.718193e-49 | -8.615850e-47 |
Msa0961220 | Msa1160470 | 0.808185 | 3.506195e-50 | -8.615850e-47 |
Msa0961220 | Msa1161520 | 0.824501 | 7.798863e-54 | -8.615850e-47 |
Msa0961220 | Msa1161550 | 0.804206 | 2.414925e-49 | -8.615850e-47 |
Msa0961220 | Msa1164650 | 0.822792 | 1.960018e-53 | -8.615850e-47 |
Msa0961220 | Msa1165330 | 0.814288 | 1.663147e-51 | -8.615850e-47 |
Msa0961220 | Msa1171640 | 0.826142 | 3.190032e-54 | -8.615850e-47 |
Msa0961220 | Msa1173410 | 0.805385 | 1.369678e-49 | -8.615850e-47 |
Msa0961220 | Msa1182950 | 0.808243 | 3.407675e-50 | -8.615850e-47 |
Msa0961220 | Msa1182960 | 0.801173 | 1.020260e-48 | -8.615850e-47 |
Msa0961220 | Msa1197210 | 0.800769 | 1.234028e-48 | -8.615850e-47 |
Msa0961220 | Msa1198280 | 0.830372 | 3.048049e-55 | -8.615850e-47 |
Msa0961220 | Msa1199690 | 0.820486 | 6.687232e-53 | -8.615850e-47 |
Msa0961220 | Msa1203840 | 0.849217 | 3.724765e-60 | -8.615850e-47 |
Msa0961220 | Msa1203860 | 0.843530 | 1.324392e-58 | -8.615850e-47 |
Msa0961220 | Msa1204110 | 0.830266 | 3.235001e-55 | -8.615850e-47 |
Msa0961220 | Msa1211880 | 0.836970 | 6.847211e-57 | -8.615850e-47 |
Msa0961220 | Msa1215660 | 0.824608 | 7.362710e-54 | -8.615850e-47 |
Msa0961220 | Msa1215790 | 0.810171 | 1.316344e-50 | -8.615850e-47 |
Msa0961220 | Msa1220390 | 0.827918 | 1.199894e-54 | -8.615850e-47 |
Msa0961220 | Msa1228280 | 0.802119 | 6.526800e-49 | -8.615850e-47 |
Msa0961220 | Msa1228330 | 0.803632 | 3.177417e-49 | -8.615850e-47 |
Msa0961220 | Msa1229880 | 0.814485 | 1.504174e-51 | -8.615850e-47 |
Msa0961220 | Msa1230190 | 0.800464 | 1.423581e-48 | -8.615850e-47 |
Msa0961220 | Msa1236990 | 0.821153 | 4.698233e-53 | -8.615850e-47 |
Msa0961220 | Msa1249740 | 0.814819 | 1.268630e-51 | -8.615850e-47 |
Msa0961220 | Msa1251890 | 0.817130 | 3.867643e-52 | -8.615850e-47 |
Msa0961220 | Msa1252040 | 0.836120 | 1.127033e-56 | -8.615850e-47 |
Msa0961220 | Msa1252220 | 0.845157 | 4.837978e-59 | -8.615850e-47 |
Msa0961220 | Msa1260640 | 0.800070 | 1.712161e-48 | -8.615850e-47 |
Msa0961220 | Msa1265900 | 0.800255 | 1.570004e-48 | -8.615850e-47 |
Msa0961220 | Msa1267800 | 0.833364 | 5.565953e-56 | -8.615850e-47 |
Msa0961220 | Msa1270860 | 0.813186 | 2.907328e-51 | -8.615850e-47 |
Msa0961220 | Msa1272770 | 0.808427 | 3.113151e-50 | -8.615850e-47 |
Msa0961220 | Msa1278080 | 0.811624 | 6.378609e-51 | -8.615850e-47 |
Msa0961220 | Msa1279200 | 0.801098 | 1.056863e-48 | -8.615850e-47 |
Msa0961220 | Msa1279240 | 0.862642 | 4.384887e-64 | -8.615850e-47 |
Msa0961220 | Msa1280510 | 0.802786 | 4.755861e-49 | -8.615850e-47 |
Msa0961220 | Msa1295220 | 0.814675 | 1.365564e-51 | -8.615850e-47 |
Msa0961220 | Msa1296270 | 0.817897 | 2.597662e-52 | -8.615850e-47 |
Msa0961220 | Msa1301410 | 0.811942 | 5.439415e-51 | -8.615850e-47 |
Msa0961220 | Msa1305970 | 0.818384 | 2.015632e-52 | -8.615850e-47 |
Msa0961220 | Msa1308010 | 0.815320 | 9.822910e-52 | -8.615850e-47 |
Msa0961220 | Msa1310620 | 0.816153 | 6.404349e-52 | -8.615850e-47 |
Msa0961220 | Msa1317340 | 0.821748 | 3.423014e-53 | -8.615850e-47 |
Msa0961220 | Msa1320660 | 0.829689 | 4.473616e-55 | -8.615850e-47 |
Msa0961220 | Msa1323920 | 0.803795 | 2.939090e-49 | -8.615850e-47 |
Msa0961220 | Msa1328680 | 0.803821 | 2.903333e-49 | -8.615850e-47 |
Msa0961220 | Msa1330910 | 0.865905 | 4.206302e-65 | -8.615850e-47 |
Msa0961220 | Msa1332180 | 0.806861 | 6.697655e-50 | -8.615850e-47 |
Msa0961220 | Msa1335210 | 0.812726 | 3.667338e-51 | -8.615850e-47 |
Msa0961220 | Msa1343540 | 0.840110 | 1.058943e-57 | -8.615850e-47 |
Msa0961220 | Msa1349410 | 0.834978 | 2.192762e-56 | -8.615850e-47 |
Msa0961220 | Msa1350350 | 0.817883 | 2.616590e-52 | -8.615850e-47 |
Msa0961220 | Msa1352840 | 0.816706 | 4.816524e-52 | -8.615850e-47 |
Msa0961220 | Msa1356500 | 0.821695 | 3.520888e-53 | -8.615850e-47 |
Msa0961220 | Msa1361090 | 0.810122 | 1.348610e-50 | -8.615850e-47 |
Msa0961220 | Msa1364850 | 0.813942 | 1.982659e-51 | -8.615850e-47 |
Msa0961220 | Msa1367920 | 0.806334 | 8.650532e-50 | -8.615850e-47 |
Msa0961220 | Msa1369390 | 0.809672 | 1.685723e-50 | -8.615850e-47 |
Msa0961220 | Msa1371260 | 0.807437 | 5.056642e-50 | -8.615850e-47 |
Msa0961220 | Msa1372570 | 0.809456 | 1.875493e-50 | -8.615850e-47 |
Msa0961220 | Msa1373570 | 0.807642 | 4.574850e-50 | -8.615850e-47 |
Msa0961220 | Msa1374210 | 0.813445 | 2.550793e-51 | -8.615850e-47 |
Msa0961220 | Msa1374610 | 0.837390 | 5.345543e-57 | -8.615850e-47 |
Msa0961220 | Msa1381300 | 0.805951 | 1.041841e-49 | -8.615850e-47 |
Msa0961220 | Msa1386180 | 0.805612 | 1.227437e-49 | -8.615850e-47 |
Msa0961220 | Msa1386190 | 0.827827 | 1.261937e-54 | -8.615850e-47 |
Msa0961220 | Msa1388070 | 0.861329 | 1.107638e-63 | -8.615850e-47 |
Msa0961220 | Msa1388270 | 0.853433 | 2.397481e-61 | -8.615850e-47 |
Msa0961220 | Msa1392570 | 0.827766 | 1.304756e-54 | -8.615850e-47 |
Msa0961220 | Msa1393350 | 0.849312 | 3.506596e-60 | -8.615850e-47 |
Msa0961220 | Msa1393600 | 0.807422 | 5.095298e-50 | -8.615850e-47 |
Msa0961220 | Msa1395360 | 0.824000 | 1.023021e-53 | -8.615850e-47 |
Msa0961220 | Msa1397550 | 0.825411 | 4.757737e-54 | -8.615850e-47 |
Msa0961220 | Msa1398310 | 0.808220 | 3.447488e-50 | -8.615850e-47 |
Msa0961220 | Msa1405190 | 0.830205 | 3.348244e-55 | -8.615850e-47 |
Msa0961220 | Msa1414000 | 0.820649 | 6.135834e-53 | -8.615850e-47 |
Msa0961220 | Msa1420630 | 0.813273 | 2.782810e-51 | -8.615850e-47 |
Msa0961220 | Msa1425570 | 0.812784 | 3.560692e-51 | -8.615850e-47 |
Msa0961220 | Msa1430630 | 0.820838 | 5.552337e-53 | -8.615850e-47 |
Msa0961220 | Msa1435690 | 0.811923 | 5.491459e-51 | -8.615850e-47 |
Msa0961220 | Msa1448410 | 0.805587 | 1.241979e-49 | -8.615850e-47 |
Msa0961220 | Msa1450850 | 0.804941 | 1.696182e-49 | -8.615850e-47 |
Msa0961220 | Msa1451780 | 0.807340 | 5.302888e-50 | -8.615850e-47 |
Msa0961220 | Msa1452080 | 0.803719 | 3.048764e-49 | -8.615850e-47 |
Msa0961220 | Msa1454330 | 0.810230 | 1.277822e-50 | -8.615850e-47 |
Msa0961220 | Msa1465410 | 0.806870 | 6.667388e-50 | -8.615850e-47 |
Msa0961220 | Msa1466170 | 0.836765 | 7.723257e-57 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961220 | MtrunA17_Chr6g0480021 | 89.720 | 321 | 15 | 1 | 1 | 321 | 1 | 303 | 0.0 | 587 |
Msa0961220 | MtrunA17_Chr6g0480011 | 67.290 | 321 | 104 | 1 | 1 | 320 | 1 | 321 | 6.32e-162 | 454 |
Msa0961220 | MtrunA17_Chr6g0479981 | 59.434 | 318 | 128 | 1 | 1 | 318 | 1 | 317 | 3.22e-144 | 409 |
Msa0961220 | MtrunA17_Chr1g0173621 | 51.703 | 323 | 145 | 2 | 1 | 320 | 1 | 315 | 1.48e-114 | 333 |
Msa0961220 | MtrunA17_Chr4g0036261 | 80.328 | 183 | 36 | 0 | 138 | 320 | 1 | 183 | 1.43e-107 | 311 |
Msa0961220 | MtrunA17_Chr3g0121001 | 50.305 | 328 | 138 | 8 | 1 | 318 | 1 | 313 | 2.86e-104 | 308 |
Msa0961220 | MtrunA17_Chr4g0036301 | 82.558 | 172 | 30 | 0 | 150 | 321 | 1 | 172 | 1.99e-102 | 297 |
Msa0961220 | MtrunA17_Chr4g0036321 | 78.947 | 171 | 36 | 0 | 150 | 320 | 1 | 171 | 2.33e-95 | 280 |
Msa0961220 | MtrunA17_Chr5g0447941 | 51.634 | 306 | 132 | 6 | 16 | 318 | 19 | 311 | 4.05e-94 | 281 |
Msa0961220 | MtrunA17_Chr5g0447951 | 53.521 | 284 | 125 | 4 | 16 | 297 | 19 | 297 | 9.88e-94 | 281 |
Msa0961220 | MtrunA17_Chr5g0447961 | 53.521 | 284 | 125 | 4 | 16 | 297 | 19 | 297 | 9.88e-94 | 281 |
Msa0961220 | MtrunA17_Chr4g0018921 | 46.855 | 318 | 162 | 6 | 5 | 320 | 2 | 314 | 4.47e-93 | 279 |
Msa0961220 | MtrunA17_Chr8g0368921 | 45.570 | 316 | 159 | 6 | 11 | 320 | 10 | 318 | 5.59e-88 | 266 |
Msa0961220 | MtrunA17_Chr8g0368931 | 43.730 | 311 | 168 | 4 | 11 | 320 | 10 | 314 | 1.58e-82 | 252 |
Msa0961220 | MtrunA17_Chr4g0009531 | 44.688 | 320 | 166 | 6 | 3 | 320 | 2 | 312 | 7.45e-81 | 248 |
Msa0961220 | MtrunA17_Chr7g0239701 | 43.210 | 324 | 173 | 6 | 1 | 320 | 1 | 317 | 2.31e-80 | 247 |
Msa0961220 | MtrunA17_Chr4g0009581 | 44.337 | 309 | 154 | 6 | 11 | 318 | 11 | 302 | 2.44e-73 | 228 |
Msa0961220 | MtrunA17_Chr7g0243551 | 40.484 | 289 | 163 | 4 | 11 | 299 | 17 | 296 | 2.28e-64 | 205 |
Msa0961220 | MtrunA17_Chr4g0036051 | 40.541 | 296 | 160 | 7 | 9 | 294 | 3 | 292 | 3.73e-59 | 192 |
Msa0961220 | MtrunA17_Chr4g0036291 | 81.132 | 106 | 20 | 0 | 1 | 106 | 1 | 106 | 2.51e-57 | 180 |
Msa0961220 | MtrunA17_Chr4g0036311 | 77.570 | 107 | 24 | 0 | 1 | 107 | 1 | 107 | 2.28e-56 | 178 |
Msa0961220 | MtrunA17_Chr4g0009621 | 44.813 | 241 | 119 | 4 | 81 | 320 | 1 | 228 | 2.89e-53 | 174 |
Msa0961220 | MtrunA17_Chr6g0479791 | 94.253 | 87 | 3 | 1 | 237 | 321 | 18 | 104 | 6.28e-52 | 166 |
Msa0961220 | MtrunA17_Chr4g0036251 | 72.897 | 107 | 23 | 2 | 1 | 107 | 1 | 101 | 7.47e-50 | 161 |
Msa0961220 | MtrunA17_Chr6g0479811 | 62.832 | 113 | 42 | 0 | 190 | 302 | 1 | 113 | 5.17e-48 | 157 |
Msa0961220 | MtrunA17_Chr6g0479801 | 91.667 | 48 | 4 | 0 | 105 | 152 | 38 | 85 | 7.58e-27 | 101 |
Msa0961220 | MtrunA17_Chr3g0095421 | 24.476 | 286 | 164 | 8 | 42 | 292 | 83 | 351 | 1.09e-11 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0961220 | AT1G59960.1 | 50.462 | 325 | 156 | 2 | 1 | 320 | 1 | 325 | 5.71e-121 | 351 |
Msa0961220 | AT1G59950.1 | 52.131 | 305 | 145 | 1 | 17 | 320 | 15 | 319 | 3.61e-111 | 325 |
Msa0961220 | AT2G37790.1 | 48.232 | 311 | 153 | 4 | 11 | 320 | 10 | 313 | 2.75e-97 | 290 |
Msa0961220 | AT2G37770.2 | 48.397 | 312 | 152 | 5 | 11 | 320 | 10 | 314 | 8.69e-95 | 284 |
Msa0961220 | AT3G53880.1 | 45.659 | 311 | 162 | 4 | 11 | 320 | 10 | 314 | 1.86e-89 | 270 |
Msa0961220 | AT5G62420.1 | 45.687 | 313 | 162 | 7 | 11 | 320 | 8 | 315 | 4.74e-89 | 269 |
Msa0961220 | AT2G37760.2 | 45.338 | 311 | 159 | 4 | 11 | 320 | 10 | 310 | 1.16e-86 | 263 |
Msa0961220 | AT2G37760.1 | 45.338 | 311 | 159 | 4 | 11 | 320 | 10 | 310 | 1.16e-86 | 263 |
Msa0961220 | AT2G37760.5 | 45.455 | 286 | 146 | 3 | 11 | 296 | 10 | 285 | 4.15e-80 | 245 |
Msa0961220 | AT2G37760.4 | 44.948 | 287 | 148 | 3 | 11 | 297 | 10 | 286 | 1.15e-79 | 244 |
Msa0961220 | AT2G37760.3 | 44.948 | 287 | 148 | 3 | 11 | 297 | 10 | 286 | 1.15e-79 | 244 |
Msa0961220 | AT5G01670.1 | 40.938 | 320 | 177 | 7 | 2 | 318 | 9 | 319 | 1.51e-79 | 245 |
Msa0961220 | AT3G53880.2 | 45.070 | 284 | 150 | 3 | 11 | 294 | 10 | 287 | 9.03e-79 | 243 |
Msa0961220 | AT5G01670.2 | 37.752 | 347 | 177 | 8 | 2 | 318 | 9 | 346 | 1.63e-73 | 231 |
Msa0961220 | AT2G37760.6 | 45.385 | 260 | 138 | 3 | 62 | 320 | 8 | 264 | 7.66e-71 | 221 |
Msa0961220 | AT2G37760.7 | 45.385 | 260 | 138 | 3 | 62 | 320 | 8 | 264 | 7.66e-71 | 221 |
Msa0961220 | AT2G21260.1 | 39.057 | 297 | 165 | 7 | 8 | 294 | 2 | 292 | 3.08e-65 | 208 |
Msa0961220 | AT2G21250.1 | 38.047 | 297 | 168 | 7 | 8 | 294 | 2 | 292 | 1.38e-63 | 204 |
Msa0961220 | AT2G37770.1 | 51.741 | 201 | 89 | 4 | 11 | 210 | 10 | 203 | 1.16e-61 | 198 |
Msa0961220 | AT2G21250.2 | 39.241 | 237 | 128 | 7 | 8 | 234 | 2 | 232 | 2.48e-47 | 159 |
Msa0961220 | AT2G21260.2 | 36.406 | 217 | 126 | 5 | 86 | 292 | 8 | 222 | 3.01e-40 | 141 |
Msa0961220 | AT1G06690.1 | 25.795 | 283 | 156 | 9 | 46 | 292 | 98 | 362 | 1.27e-13 | 71.2 |
Msa0961220 | AT1G60750.1 | 28.324 | 346 | 186 | 18 | 2 | 314 | 4 | 320 | 3.55e-12 | 66.6 |
Msa0961220 | AT5G53580.1 | 23.571 | 280 | 161 | 9 | 42 | 285 | 80 | 342 | 9.25e-12 | 65.9 |
Find 95 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGAGCATACAAAGTATTT+TGG | 0.154726 | 6_3:-82334365 | Msa0961220:CDS |
TTTCTTACATTGTTTGTATT+AGG | 0.158919 | 6_3:-82335468 | Msa0961220:five_prime_UTR |
TGAAGCTCTCACTTCAATTT+TGG | 0.164436 | 6_3:-82335131 | Msa0961220:CDS |
TTTATTTATGCAACACATTA+AGG | 0.227807 | 6_3:-82335343 | Msa0961220:five_prime_UTR |
TCCACAATGCAGACTTTATA+AGG | 0.257806 | 6_3:-82333765 | Msa0961220:CDS |
TTCTTACATTGTTTGTATTA+GGG | 0.272137 | 6_3:-82335467 | Msa0961220:five_prime_UTR |
TTTGATACAGCTTCTATCTA+TGG | 0.288397 | 6_3:-82335079 | Msa0961220:CDS |
TCGAATTGTTTAGGAATCTA+AGG | 0.315799 | 6_3:-82334837 | Msa0961220:intron |
TCACCATTGATTCTGAGATA+TGG | 0.324237 | 6_3:+82335270 | None:intergenic |
GATGGAGAACTCTATTCTTC+TGG | 0.340422 | 6_3:-82334328 | Msa0961220:CDS |
GAAACTGAACCAAGAAGAAT+TGG | 0.348726 | 6_3:-82333804 | Msa0961220:CDS |
ATAAAAGCTTGCTTGCCTAT+TGG | 0.350884 | 6_3:-82335411 | Msa0961220:five_prime_UTR |
GGACCATGCATTTATCATCT+AGG | 0.352476 | 6_3:-82335446 | Msa0961220:five_prime_UTR |
CATTTCGCCTGCAGTTAATC+AGG | 0.352692 | 6_3:-82334602 | Msa0961220:intron |
ACTTTGAGTTTGATTCTTTG+AGG | 0.354064 | 6_3:+82335299 | None:intergenic |
GTTACTAACACCAATAGATT+TGG | 0.354709 | 6_3:+82334666 | None:intergenic |
CCATGAGGTGATACTAAATT+CGG | 0.362220 | 6_3:-82335209 | Msa0961220:CDS |
CATGTTCCTTTGATATCAAA+TGG | 0.366654 | 6_3:+82334724 | None:intergenic |
TTCTGCAACGAATGAGATAA+AGG | 0.373223 | 6_3:+82333585 | None:intergenic |
GGGGAAAAGATGCCAGTAAT+AGG | 0.379501 | 6_3:-82335187 | Msa0961220:CDS |
AAAACCTTGAAATATTTGAT+TGG | 0.391571 | 6_3:-82333826 | Msa0961220:CDS |
GAAGTGAGAGCTTCATTTGA+TGG | 0.392979 | 6_3:+82335139 | None:intergenic |
CTGATTAACTGCAGGCGAAA+TGG | 0.409696 | 6_3:+82334603 | None:intergenic |
TGTATAAAAGACAGTCCAAT+AGG | 0.410506 | 6_3:+82335396 | None:intergenic |
TTAGGCTTAGCCAAATCTAT+TGG | 0.410561 | 6_3:-82334676 | Msa0961220:CDS |
AGTTTCCCTTGTTGCCATGA+TGG | 0.413836 | 6_3:+82334438 | None:intergenic |
ATGGAAGACTGTTACAGATT+AGG | 0.430151 | 6_3:-82334694 | Msa0961220:CDS |
TCAACAAATTACATTGTTCA+AGG | 0.430793 | 6_3:+82333329 | None:intergenic |
GTTTCCAATCAAATATTTCA+AGG | 0.435069 | 6_3:+82333822 | None:intergenic |
GCAGTTCCTAGGCCTATTAC+TGG | 0.435239 | 6_3:+82335175 | None:intergenic |
TCTTGCAGATAGCACTAAGA+TGG | 0.451601 | 6_3:-82333907 | Msa0961220:intron |
TCCTCTGCTTGACTAAATCT+AGG | 0.457745 | 6_3:+82333367 | None:intergenic |
AAATGGACCTTACAAATCCT+TGG | 0.461855 | 6_3:-82333723 | Msa0961220:CDS |
CATCCATATCTCAGAATCAA+TGG | 0.463441 | 6_3:-82335273 | Msa0961220:five_prime_UTR |
TATTCTTCTGGAAATTGCTC+AGG | 0.470924 | 6_3:-82334316 | Msa0961220:CDS |
GAGGAGATGTAGCAGTTCCT+AGG | 0.470932 | 6_3:+82335164 | None:intergenic |
CAAAGGAACATGGGAAGCTA+TGG | 0.471811 | 6_3:-82334713 | Msa0961220:CDS |
TGGATCTCTACTTGATTCAC+TGG | 0.472213 | 6_3:-82334804 | Msa0961220:CDS |
TGAACTAACACTAGAAAAGA+TGG | 0.475145 | 6_3:-82335245 | Msa0961220:exon |
AGCTCTTCCAAGGATTTGTA+AGG | 0.476136 | 6_3:+82333716 | None:intergenic |
GTTGAAGGCTTTAACTTCAC+AGG | 0.478558 | 6_3:-82334760 | Msa0961220:CDS |
AGAGCTTCATTTGATGGAAG+AGG | 0.479484 | 6_3:+82335145 | None:intergenic |
TAGGAAGAAGAGTGTAGCTC+AGG | 0.480111 | 6_3:-82334292 | Msa0961220:intron |
ACATCTTCTTTCAATCTCAC+TGG | 0.482395 | 6_3:+82334781 | None:intergenic |
CATGAGGTGATACTAAATTC+GGG | 0.484916 | 6_3:-82335208 | Msa0961220:CDS |
CATGGCAACAAGGGAAACTC+AGG | 0.493453 | 6_3:-82334434 | Msa0961220:CDS |
GAATCTAAGGTTGGAGTATG+TGG | 0.495354 | 6_3:-82334824 | Msa0961220:CDS |
TGTGTGTGCATGGTCACCAT+TGG | 0.497595 | 6_3:-82334385 | Msa0961220:CDS |
ATTGTTTAGGAATCTAAGGT+TGG | 0.498482 | 6_3:-82334833 | Msa0961220:intron |
CATTTGATATCAAAGGAACA+TGG | 0.501156 | 6_3:-82334723 | Msa0961220:CDS |
GTGTGTGCATGGTCACCATT+GGG | 0.511118 | 6_3:-82334384 | Msa0961220:CDS |
CTTTCACGCTGTGGATGCTA+TGG | 0.515324 | 6_3:-82333482 | Msa0961220:three_prime_UTR |
GTGATTCCATTTGATATCAA+AGG | 0.515819 | 6_3:-82334730 | Msa0961220:CDS |
GGTTGCATTGTCCAAGAGTA+CGG | 0.517514 | 6_3:+82334624 | None:intergenic |
AGGGAATTCTGCATGAAGAA+AGG | 0.520886 | 6_3:-82334414 | Msa0961220:CDS |
CAAATCCTTGGAAGAGCTGT+GGG | 0.525762 | 6_3:-82333711 | Msa0961220:CDS |
AAGCATTGCAATTATATCAA+AGG | 0.539099 | 6_3:+82333303 | None:intergenic |
GAGTTTGATTCTTTGAGGTG+TGG | 0.541015 | 6_3:+82335304 | None:intergenic |
TCTTATACCTGATTAACTGC+AGG | 0.543967 | 6_3:+82334595 | None:intergenic |
GACCATGCATTTATCATCTA+GGG | 0.545482 | 6_3:-82335445 | Msa0961220:five_prime_UTR |
AGATTGAAAGAAGATGTTGA+AGG | 0.547100 | 6_3:-82334775 | Msa0961220:CDS |
AAGATGCCAGTAATAGGCCT+AGG | 0.550717 | 6_3:-82335181 | Msa0961220:CDS |
TTGGGGTTCTAATGCTGTGA+TGG | 0.554067 | 6_3:-82334346 | Msa0961220:CDS |
TCCTAGATTTAGTCAAGCAG+AGG | 0.557738 | 6_3:-82333368 | Msa0961220:three_prime_UTR |
GTGTCAAAAGCTTTAGAGAT+CGG | 0.568756 | 6_3:-82335031 | Msa0961220:CDS |
AACAAGGTCATGGTGAGCAT+CGG | 0.569974 | 6_3:+82334958 | None:intergenic |
CCGAATTTAGTATCACCTCA+TGG | 0.575461 | 6_3:+82335209 | None:intergenic |
TTGGTTGATGCCATTCACAT+TGG | 0.577773 | 6_3:-82335112 | Msa0961220:CDS |
ACCATCCCACAGCTCTTCCA+AGG | 0.580081 | 6_3:+82333706 | None:intergenic |
ATGAATCCATCATGGCAACA+AGG | 0.583038 | 6_3:-82334444 | Msa0961220:CDS |
ATGTCTGTAGCCAATGTGAA+TGG | 0.585278 | 6_3:+82335102 | None:intergenic |
TTCTGGAAATTGCTCAGGCT+AGG | 0.591523 | 6_3:-82334311 | Msa0961220:CDS |
AGGTAGAAATGAATCCATCA+TGG | 0.594785 | 6_3:-82334452 | Msa0961220:CDS |
ACAAATCCTTGGAAGAGCTG+TGG | 0.595019 | 6_3:-82333712 | Msa0961220:CDS |
TGAAAAGCTTCAACAAAGAG+AGG | 0.595864 | 6_3:-82333856 | Msa0961220:CDS |
TTTGACACAGCTTGGCCTAG+AGG | 0.596039 | 6_3:+82335046 | None:intergenic |
TGAATCCATCATGGCAACAA+GGG | 0.596651 | 6_3:-82334443 | Msa0961220:CDS |
TCGGAAACTCTTTCACGCTG+TGG | 0.600567 | 6_3:-82333491 | Msa0961220:three_prime_UTR |
ATTTGATATCAAAGGAACAT+GGG | 0.604512 | 6_3:-82334722 | Msa0961220:CDS |
GCCTTATAAAGTCTGCATTG+TGG | 0.609832 | 6_3:+82333764 | None:intergenic |
AGGCTTTAACTTCACAGGTG+AGG | 0.611497 | 6_3:-82334755 | Msa0961220:CDS |
TTATGCAACACATTAAGGTG+TGG | 0.613161 | 6_3:-82335338 | Msa0961220:five_prime_UTR |
GGCCCTAGATGATAAATGCA+TGG | 0.614717 | 6_3:+82335443 | None:intergenic |
TATGGTACTGAAGAACCTCT+AGG | 0.616094 | 6_3:-82335061 | Msa0961220:CDS |
AATACTTTGTATGCTCCCAA+TGG | 0.618795 | 6_3:+82334369 | None:intergenic |
GAACAATGCTTACTTGAGGG+TGG | 0.623073 | 6_3:+82334919 | None:intergenic |
AAGGAATTCATGTGTGTGCA+TGG | 0.624563 | 6_3:-82334395 | Msa0961220:CDS |
GAGCATTGAGAACAAGGTCA+TGG | 0.634564 | 6_3:+82334948 | None:intergenic |
ACTCATAATCAAAAGAGACA+TGG | 0.647321 | 6_3:+82333400 | None:intergenic |
ATGAGGTGATACTAAATTCG+GGG | 0.654424 | 6_3:-82335207 | Msa0961220:CDS |
TCCTTGGAAGAGCTGTGGGA+TGG | 0.668107 | 6_3:-82333707 | Msa0961220:CDS |
ATGGCAACAAGGGAAACTCA+GGG | 0.675053 | 6_3:-82334433 | Msa0961220:CDS |
TGAGGTGATACTAAATTCGG+GGG | 0.676837 | 6_3:-82335206 | Msa0961220:CDS |
CTAAGATGGATACATGAGCA+AGG | 0.686586 | 6_3:-82333893 | Msa0961220:CDS |
GGAAGCAACTAAACTCCATG+AGG | 0.702832 | 6_3:-82335224 | Msa0961220:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTTACATATAAAAGATT+CGG | - | chr6_3:82335274-82335293 | Msa0961220:five_prime_UTR | 10.0% |
!!! | AATTTTACATATAAAAGATT+CGG | - | chr6_3:82335274-82335293 | Msa0961220:five_prime_UTR | 10.0% |
!! | AAAAATAACAAAATTAGAGA+AGG | + | chr6_3:82333924-82333943 | None:intergenic | 15.0% |
!! | AAAAATAACAAAATTAGAGA+AGG | + | chr6_3:82333924-82333943 | None:intergenic | 15.0% |
!! | TTTCTTACATTGTTTGTATT+AGG | - | chr6_3:82333316-82333335 | Msa0961220:three_prime_UTR | 20.0% |
!! | TTCTTACATTGTTTGTATTA+GGG | - | chr6_3:82333317-82333336 | Msa0961220:three_prime_UTR | 20.0% |
!! | TTTATTTATGCAACACATTA+AGG | - | chr6_3:82333441-82333460 | Msa0961220:three_prime_UTR | 20.0% |
!!! | ATTTTTTGTTCGAATTGTTT+AGG | - | chr6_3:82333938-82333957 | Msa0961220:intron | 20.0% |
!! | TGTTATAAAATTCACTCAAT+TGG | - | chr6_3:82334286-82334305 | Msa0961220:intron | 20.0% |
!! | ACCTTAAAATGTTAGATAAA+TGG | - | chr6_3:82334590-82334609 | Msa0961220:intron | 20.0% |
!!! | GCTTATACATAAGTAATTTT+AGG | - | chr6_3:82334820-82334839 | Msa0961220:CDS | 20.0% |
!! | AAAACCTTGAAATATTTGAT+TGG | - | chr6_3:82334958-82334977 | Msa0961220:CDS | 20.0% |
!!! | GAAATGTTTTTATCTGAAAA+TGG | - | chr6_3:82335044-82335063 | Msa0961220:CDS | 20.0% |
!! | TTTCTTACATTGTTTGTATT+AGG | - | chr6_3:82333316-82333335 | Msa0961220:three_prime_UTR | 20.0% |
!! | TTCTTACATTGTTTGTATTA+GGG | - | chr6_3:82333317-82333336 | Msa0961220:three_prime_UTR | 20.0% |
!! | TTTATTTATGCAACACATTA+AGG | - | chr6_3:82333441-82333460 | Msa0961220:three_prime_UTR | 20.0% |
!!! | ATTTTTTGTTCGAATTGTTT+AGG | - | chr6_3:82333938-82333957 | Msa0961220:intron | 20.0% |
!! | TGTTATAAAATTCACTCAAT+TGG | - | chr6_3:82334286-82334305 | Msa0961220:intron | 20.0% |
!! | ACCTTAAAATGTTAGATAAA+TGG | - | chr6_3:82334590-82334609 | Msa0961220:intron | 20.0% |
!!! | GCTTATACATAAGTAATTTT+AGG | - | chr6_3:82334820-82334839 | Msa0961220:CDS | 20.0% |
!! | AAAACCTTGAAATATTTGAT+TGG | - | chr6_3:82334958-82334977 | Msa0961220:CDS | 20.0% |
!!! | GAAATGTTTTTATCTGAAAA+TGG | - | chr6_3:82335044-82335063 | Msa0961220:CDS | 20.0% |
!! | TTTTCATCACTTCTAAGTTA+TGG | - | chr6_3:82333799-82333818 | Msa0961220:CDS | 25.0% |
! | ATTTGATATCAAAGGAACAT+GGG | - | chr6_3:82334062-82334081 | Msa0961220:intron | 25.0% |
! | AGCATTAACGTAATATTGAT+TGG | + | chr6_3:82334257-82334276 | None:intergenic | 25.0% |
!! | GCCATTTATCTAACATTTTA+AGG | + | chr6_3:82334594-82334613 | None:intergenic | 25.0% |
! | GTTTCCAATCAAATATTTCA+AGG | + | chr6_3:82334965-82334984 | None:intergenic | 25.0% |
!! | GATTTTGTGCAAGTTAAAAA+AGG | + | chr6_3:82335168-82335187 | None:intergenic | 25.0% |
! | TCAACAAATTACATTGTTCA+AGG | + | chr6_3:82335458-82335477 | None:intergenic | 25.0% |
!! | AAGCATTGCAATTATATCAA+AGG | + | chr6_3:82335484-82335503 | None:intergenic | 25.0% |
!!! | AAGTGAATGTTTCAAGTTTT+TGG | + | chr6_3:82333298-82333317 | None:intergenic | 25.0% |
!! | TTTTCATCACTTCTAAGTTA+TGG | - | chr6_3:82333799-82333818 | Msa0961220:CDS | 25.0% |
! | ATTTGATATCAAAGGAACAT+GGG | - | chr6_3:82334062-82334081 | Msa0961220:intron | 25.0% |
! | AGCATTAACGTAATATTGAT+TGG | + | chr6_3:82334257-82334276 | None:intergenic | 25.0% |
!! | GCCATTTATCTAACATTTTA+AGG | + | chr6_3:82334594-82334613 | None:intergenic | 25.0% |
! | GTTTCCAATCAAATATTTCA+AGG | + | chr6_3:82334965-82334984 | None:intergenic | 25.0% |
!! | GATTTTGTGCAAGTTAAAAA+AGG | + | chr6_3:82335168-82335187 | None:intergenic | 25.0% |
! | TCAACAAATTACATTGTTCA+AGG | + | chr6_3:82335458-82335477 | None:intergenic | 25.0% |
!! | AAGCATTGCAATTATATCAA+AGG | + | chr6_3:82335484-82335503 | None:intergenic | 25.0% |
!! | GCAAGCTTTTATTGACTATT+TGG | + | chr6_3:82333365-82333384 | None:intergenic | 30.0% |
TGTATAAAAGACAGTCCAAT+AGG | + | chr6_3:82333391-82333410 | None:intergenic | 30.0% | |
! | ACTGTCTTTTATACAACCTA+AGG | - | chr6_3:82333396-82333415 | Msa0961220:three_prime_UTR | 30.0% |
! | ACTTTGAGTTTGATTCTTTG+AGG | + | chr6_3:82333488-82333507 | None:intergenic | 30.0% |
TGAACTAACACTAGAAAAGA+TGG | - | chr6_3:82333539-82333558 | Msa0961220:three_prime_UTR | 30.0% | |
TTTGATACAGCTTCTATCTA+TGG | - | chr6_3:82333705-82333724 | Msa0961220:CDS | 30.0% | |
!! | CTGTGCAACTTTTTCTTTTA+AGG | - | chr6_3:82333887-82333906 | Msa0961220:CDS | 30.0% |
TCGAATTGTTTAGGAATCTA+AGG | - | chr6_3:82333947-82333966 | Msa0961220:intron | 30.0% | |
! | ATTGTTTAGGAATCTAAGGT+TGG | - | chr6_3:82333951-82333970 | Msa0961220:intron | 30.0% |
AGATTGAAAGAAGATGTTGA+AGG | - | chr6_3:82334009-82334028 | Msa0961220:intron | 30.0% | |
GTGATTCCATTTGATATCAA+AGG | - | chr6_3:82334054-82334073 | Msa0961220:intron | 30.0% | |
CATGTTCCTTTGATATCAAA+TGG | + | chr6_3:82334063-82334082 | None:intergenic | 30.0% | |
CATTTGATATCAAAGGAACA+TGG | - | chr6_3:82334061-82334080 | Msa0961220:intron | 30.0% | |
GTTACTAACACCAATAGATT+TGG | + | chr6_3:82334121-82334140 | None:intergenic | 30.0% | |
! | CATGTTGATTATCTCGATTT+AGG | - | chr6_3:82334312-82334331 | Msa0961220:CDS | 30.0% |
!!! | GGTTTTAGAACAGTTTGTTT+AGG | + | chr6_3:82334573-82334592 | None:intergenic | 30.0% |
TACGAACATAAATACTTGTG+AGG | - | chr6_3:82334642-82334661 | Msa0961220:CDS | 30.0% | |
ATTGGAAACAGTTAATGACA+TGG | - | chr6_3:82334692-82334711 | Msa0961220:CDS | 30.0% | |
AAACAACAGTGAAGATCTTA+CGG | + | chr6_3:82334742-82334761 | None:intergenic | 30.0% | |
! | TGATTTTGTCCAATTCTTCT+TGG | + | chr6_3:82334992-82335011 | None:intergenic | 30.0% |
! | CAATACAAGATTTTGCTCAA+GGG | + | chr6_3:82335106-82335125 | None:intergenic | 30.0% |
! | TCAATACAAGATTTTGCTCA+AGG | + | chr6_3:82335107-82335126 | None:intergenic | 30.0% |
ACTCATAATCAAAAGAGACA+TGG | + | chr6_3:82335387-82335406 | None:intergenic | 30.0% | |
!! | GCAAGCTTTTATTGACTATT+TGG | + | chr6_3:82333365-82333384 | None:intergenic | 30.0% |
TGTATAAAAGACAGTCCAAT+AGG | + | chr6_3:82333391-82333410 | None:intergenic | 30.0% | |
! | ACTGTCTTTTATACAACCTA+AGG | - | chr6_3:82333396-82333415 | Msa0961220:three_prime_UTR | 30.0% |
! | ACTTTGAGTTTGATTCTTTG+AGG | + | chr6_3:82333488-82333507 | None:intergenic | 30.0% |
TGAACTAACACTAGAAAAGA+TGG | - | chr6_3:82333539-82333558 | Msa0961220:three_prime_UTR | 30.0% | |
TTTGATACAGCTTCTATCTA+TGG | - | chr6_3:82333705-82333724 | Msa0961220:CDS | 30.0% | |
!! | CTGTGCAACTTTTTCTTTTA+AGG | - | chr6_3:82333887-82333906 | Msa0961220:CDS | 30.0% |
TCGAATTGTTTAGGAATCTA+AGG | - | chr6_3:82333947-82333966 | Msa0961220:intron | 30.0% | |
! | ATTGTTTAGGAATCTAAGGT+TGG | - | chr6_3:82333951-82333970 | Msa0961220:intron | 30.0% |
AGATTGAAAGAAGATGTTGA+AGG | - | chr6_3:82334009-82334028 | Msa0961220:intron | 30.0% | |
GTGATTCCATTTGATATCAA+AGG | - | chr6_3:82334054-82334073 | Msa0961220:intron | 30.0% | |
CATGTTCCTTTGATATCAAA+TGG | + | chr6_3:82334063-82334082 | None:intergenic | 30.0% | |
CATTTGATATCAAAGGAACA+TGG | - | chr6_3:82334061-82334080 | Msa0961220:intron | 30.0% | |
GTTACTAACACCAATAGATT+TGG | + | chr6_3:82334121-82334140 | None:intergenic | 30.0% | |
! | CATGTTGATTATCTCGATTT+AGG | - | chr6_3:82334312-82334331 | Msa0961220:CDS | 30.0% |
!!! | GGTTTTAGAACAGTTTGTTT+AGG | + | chr6_3:82334573-82334592 | None:intergenic | 30.0% |
TACGAACATAAATACTTGTG+AGG | - | chr6_3:82334642-82334661 | Msa0961220:CDS | 30.0% | |
ATTGGAAACAGTTAATGACA+TGG | - | chr6_3:82334692-82334711 | Msa0961220:CDS | 30.0% | |
AAACAACAGTGAAGATCTTA+CGG | + | chr6_3:82334742-82334761 | None:intergenic | 30.0% | |
! | TGATTTTGTCCAATTCTTCT+TGG | + | chr6_3:82334992-82335011 | None:intergenic | 30.0% |
! | CAATACAAGATTTTGCTCAA+GGG | + | chr6_3:82335106-82335125 | None:intergenic | 30.0% |
! | TCAATACAAGATTTTGCTCA+AGG | + | chr6_3:82335107-82335126 | None:intergenic | 30.0% |
ACTCATAATCAAAAGAGACA+TGG | + | chr6_3:82335387-82335406 | None:intergenic | 30.0% | |
GACCATGCATTTATCATCTA+GGG | - | chr6_3:82333339-82333358 | Msa0961220:three_prime_UTR | 35.0% | |
! | ATAAAAGCTTGCTTGCCTAT+TGG | - | chr6_3:82333373-82333392 | Msa0961220:three_prime_UTR | 35.0% |
TTATGCAACACATTAAGGTG+TGG | - | chr6_3:82333446-82333465 | Msa0961220:three_prime_UTR | 35.0% | |
CATCCATATCTCAGAATCAA+TGG | - | chr6_3:82333511-82333530 | Msa0961220:three_prime_UTR | 35.0% | |
!! | TCACCATTGATTCTGAGATA+TGG | + | chr6_3:82333517-82333536 | None:intergenic | 35.0% |
CCATGAGGTGATACTAAATT+CGG | - | chr6_3:82333575-82333594 | Msa0961220:three_prime_UTR | 35.0% | |
CATGAGGTGATACTAAATTC+GGG | - | chr6_3:82333576-82333595 | Msa0961220:three_prime_UTR | 35.0% | |
ATGAGGTGATACTAAATTCG+GGG | - | chr6_3:82333577-82333596 | Msa0961220:three_prime_UTR | 35.0% | |
! | TGAAGCTCTCACTTCAATTT+TGG | - | chr6_3:82333653-82333672 | Msa0961220:three_prime_UTR | 35.0% |
!! | GTGTCAAAAGCTTTAGAGAT+CGG | - | chr6_3:82333753-82333772 | Msa0961220:CDS | 35.0% |
!!! | CTTCATCGCGATTTTTTATG+AGG | + | chr6_3:82333779-82333798 | None:intergenic | 35.0% |
!!! | TTTTGAGAGCATTGAGAACA+AGG | + | chr6_3:82333845-82333864 | None:intergenic | 35.0% |
ACAGAACAATGCTTACTTGA+GGG | + | chr6_3:82333871-82333890 | None:intergenic | 35.0% | |
ACATCTTCTTTCAATCTCAC+TGG | + | chr6_3:82334006-82334025 | None:intergenic | 35.0% | |
ATGGAAGACTGTTACAGATT+AGG | - | chr6_3:82334090-82334109 | Msa0961220:intron | 35.0% | |
TTAGGCTTAGCCAAATCTAT+TGG | - | chr6_3:82334108-82334127 | Msa0961220:intron | 35.0% | |
TCTTATACCTGATTAACTGC+AGG | + | chr6_3:82334192-82334211 | None:intergenic | 35.0% | |
AGGTAGAAATGAATCCATCA+TGG | - | chr6_3:82334332-82334351 | Msa0961220:CDS | 35.0% | |
AATACTTTGTATGCTCCCAA+TGG | + | chr6_3:82334418-82334437 | None:intergenic | 35.0% | |
!! | TGGGAGCATACAAAGTATTT+TGG | - | chr6_3:82334419-82334438 | Msa0961220:CDS | 35.0% |
!! | GGGAGCATACAAAGTATTTT+GGG | - | chr6_3:82334420-82334439 | Msa0961220:CDS | 35.0% |
!! | GGAGCATACAAAGTATTTTG+GGG | - | chr6_3:82334421-82334440 | Msa0961220:CDS | 35.0% |
! | TATTCTTCTGGAAATTGCTC+AGG | - | chr6_3:82334468-82334487 | Msa0961220:intron | 35.0% |
CTGCACTAAGAAATCTAAAG+AGG | + | chr6_3:82334616-82334635 | None:intergenic | 35.0% | |
TTATGACTTATGAGAGCTCA+TGG | - | chr6_3:82334669-82334688 | Msa0961220:CDS | 35.0% | |
TGAAAAGCTTCAACAAAGAG+AGG | - | chr6_3:82334928-82334947 | Msa0961220:intron | 35.0% | |
GAAACTGAACCAAGAAGAAT+TGG | - | chr6_3:82334980-82334999 | Msa0961220:CDS | 35.0% | |
TCCACAATGCAGACTTTATA+AGG | - | chr6_3:82335019-82335038 | Msa0961220:CDS | 35.0% | |
AAATGGACCTTACAAATCCT+TGG | - | chr6_3:82335061-82335080 | Msa0961220:CDS | 35.0% | |
TTCTGCAACGAATGAGATAA+AGG | + | chr6_3:82335202-82335221 | None:intergenic | 35.0% | |
GACCATGCATTTATCATCTA+GGG | - | chr6_3:82333339-82333358 | Msa0961220:three_prime_UTR | 35.0% | |
! | ATAAAAGCTTGCTTGCCTAT+TGG | - | chr6_3:82333373-82333392 | Msa0961220:three_prime_UTR | 35.0% |
TTATGCAACACATTAAGGTG+TGG | - | chr6_3:82333446-82333465 | Msa0961220:three_prime_UTR | 35.0% | |
CATCCATATCTCAGAATCAA+TGG | - | chr6_3:82333511-82333530 | Msa0961220:three_prime_UTR | 35.0% | |
!! | TCACCATTGATTCTGAGATA+TGG | + | chr6_3:82333517-82333536 | None:intergenic | 35.0% |
CCATGAGGTGATACTAAATT+CGG | - | chr6_3:82333575-82333594 | Msa0961220:three_prime_UTR | 35.0% | |
CATGAGGTGATACTAAATTC+GGG | - | chr6_3:82333576-82333595 | Msa0961220:three_prime_UTR | 35.0% | |
ATGAGGTGATACTAAATTCG+GGG | - | chr6_3:82333577-82333596 | Msa0961220:three_prime_UTR | 35.0% | |
! | TGAAGCTCTCACTTCAATTT+TGG | - | chr6_3:82333653-82333672 | Msa0961220:three_prime_UTR | 35.0% |
!! | GTGTCAAAAGCTTTAGAGAT+CGG | - | chr6_3:82333753-82333772 | Msa0961220:CDS | 35.0% |
!!! | CTTCATCGCGATTTTTTATG+AGG | + | chr6_3:82333779-82333798 | None:intergenic | 35.0% |
!!! | TTTTGAGAGCATTGAGAACA+AGG | + | chr6_3:82333845-82333864 | None:intergenic | 35.0% |
ACAGAACAATGCTTACTTGA+GGG | + | chr6_3:82333871-82333890 | None:intergenic | 35.0% | |
ACATCTTCTTTCAATCTCAC+TGG | + | chr6_3:82334006-82334025 | None:intergenic | 35.0% | |
ATGGAAGACTGTTACAGATT+AGG | - | chr6_3:82334090-82334109 | Msa0961220:intron | 35.0% | |
TTAGGCTTAGCCAAATCTAT+TGG | - | chr6_3:82334108-82334127 | Msa0961220:intron | 35.0% | |
TCTTATACCTGATTAACTGC+AGG | + | chr6_3:82334192-82334211 | None:intergenic | 35.0% | |
AGGTAGAAATGAATCCATCA+TGG | - | chr6_3:82334332-82334351 | Msa0961220:CDS | 35.0% | |
AATACTTTGTATGCTCCCAA+TGG | + | chr6_3:82334418-82334437 | None:intergenic | 35.0% | |
!! | TGGGAGCATACAAAGTATTT+TGG | - | chr6_3:82334419-82334438 | Msa0961220:CDS | 35.0% |
!! | GGGAGCATACAAAGTATTTT+GGG | - | chr6_3:82334420-82334439 | Msa0961220:CDS | 35.0% |
!! | GGAGCATACAAAGTATTTTG+GGG | - | chr6_3:82334421-82334440 | Msa0961220:CDS | 35.0% |
! | TATTCTTCTGGAAATTGCTC+AGG | - | chr6_3:82334468-82334487 | Msa0961220:intron | 35.0% |
CTGCACTAAGAAATCTAAAG+AGG | + | chr6_3:82334616-82334635 | None:intergenic | 35.0% | |
TTATGACTTATGAGAGCTCA+TGG | - | chr6_3:82334669-82334688 | Msa0961220:CDS | 35.0% | |
TGAAAAGCTTCAACAAAGAG+AGG | - | chr6_3:82334928-82334947 | Msa0961220:intron | 35.0% | |
GAAACTGAACCAAGAAGAAT+TGG | - | chr6_3:82334980-82334999 | Msa0961220:CDS | 35.0% | |
TCCACAATGCAGACTTTATA+AGG | - | chr6_3:82335019-82335038 | Msa0961220:CDS | 35.0% | |
AAATGGACCTTACAAATCCT+TGG | - | chr6_3:82335061-82335080 | Msa0961220:CDS | 35.0% | |
TTCTGCAACGAATGAGATAA+AGG | + | chr6_3:82335202-82335221 | None:intergenic | 35.0% | |
GGACCATGCATTTATCATCT+AGG | - | chr6_3:82333338-82333357 | Msa0961220:three_prime_UTR | 40.0% | |
! | GATGACACATTTTACGCCTT+AGG | + | chr6_3:82333415-82333434 | None:intergenic | 40.0% |
!! | GAGTTTGATTCTTTGAGGTG+TGG | + | chr6_3:82333483-82333502 | None:intergenic | 40.0% |
CCGAATTTAGTATCACCTCA+TGG | + | chr6_3:82333578-82333597 | None:intergenic | 40.0% | |
TGAGGTGATACTAAATTCGG+GGG | - | chr6_3:82333578-82333597 | Msa0961220:three_prime_UTR | 40.0% | |
AGAGCTTCATTTGATGGAAG+AGG | + | chr6_3:82333642-82333661 | None:intergenic | 40.0% | |
GAAGTGAGAGCTTCATTTGA+TGG | + | chr6_3:82333648-82333667 | None:intergenic | 40.0% | |
! | TTGGTTGATGCCATTCACAT+TGG | - | chr6_3:82333672-82333691 | Msa0961220:three_prime_UTR | 40.0% |
ATGTCTGTAGCCAATGTGAA+TGG | + | chr6_3:82333685-82333704 | None:intergenic | 40.0% | |
! | TATGGTACTGAAGAACCTCT+AGG | - | chr6_3:82333723-82333742 | Msa0961220:CDS | 40.0% |
! | CTAAAGCTTTTGACACAGCT+TGG | + | chr6_3:82333749-82333768 | None:intergenic | 40.0% |
CACAGAACAATGCTTACTTG+AGG | + | chr6_3:82333872-82333891 | None:intergenic | 40.0% | |
! | GAATCTAAGGTTGGAGTATG+TGG | - | chr6_3:82333960-82333979 | Msa0961220:intron | 40.0% |
TGGATCTCTACTTGATTCAC+TGG | - | chr6_3:82333980-82333999 | Msa0961220:intron | 40.0% | |
! | GTTGAAGGCTTTAACTTCAC+AGG | - | chr6_3:82334024-82334043 | Msa0961220:intron | 40.0% |
CAAAAAGCTTTCCGTACTCT+TGG | - | chr6_3:82334149-82334168 | Msa0961220:intron | 40.0% | |
ATGAATCCATCATGGCAACA+AGG | - | chr6_3:82334340-82334359 | Msa0961220:CDS | 40.0% | |
TGAATCCATCATGGCAACAA+GGG | - | chr6_3:82334341-82334360 | Msa0961220:CDS | 40.0% | |
AGGGAATTCTGCATGAAGAA+AGG | - | chr6_3:82334370-82334389 | Msa0961220:CDS | 40.0% | |
AAGGAATTCATGTGTGTGCA+TGG | - | chr6_3:82334389-82334408 | Msa0961220:CDS | 40.0% | |
GATGGAGAACTCTATTCTTC+TGG | - | chr6_3:82334456-82334475 | Msa0961220:intron | 40.0% | |
ACTTATGAGAGCTCATGGAT+TGG | - | chr6_3:82334674-82334693 | Msa0961220:CDS | 40.0% | |
TCTTGCAGATAGCACTAAGA+TGG | - | chr6_3:82334877-82334896 | Msa0961220:intron | 40.0% | |
CTAAGATGGATACATGAGCA+AGG | - | chr6_3:82334891-82334910 | Msa0961220:intron | 40.0% | |
GCCTTATAAAGTCTGCATTG+TGG | + | chr6_3:82335023-82335042 | None:intergenic | 40.0% | |
AGCTCTTCCAAGGATTTGTA+AGG | + | chr6_3:82335071-82335090 | None:intergenic | 40.0% | |
TCCTAGATTTAGTCAAGCAG+AGG | - | chr6_3:82335416-82335435 | Msa0961220:five_prime_UTR | 40.0% | |
TCCTCTGCTTGACTAAATCT+AGG | + | chr6_3:82335420-82335439 | None:intergenic | 40.0% | |
GGACCATGCATTTATCATCT+AGG | - | chr6_3:82333338-82333357 | Msa0961220:three_prime_UTR | 40.0% | |
! | GATGACACATTTTACGCCTT+AGG | + | chr6_3:82333415-82333434 | None:intergenic | 40.0% |
!! | GAGTTTGATTCTTTGAGGTG+TGG | + | chr6_3:82333483-82333502 | None:intergenic | 40.0% |
CCGAATTTAGTATCACCTCA+TGG | + | chr6_3:82333578-82333597 | None:intergenic | 40.0% | |
TGAGGTGATACTAAATTCGG+GGG | - | chr6_3:82333578-82333597 | Msa0961220:three_prime_UTR | 40.0% | |
AGAGCTTCATTTGATGGAAG+AGG | + | chr6_3:82333642-82333661 | None:intergenic | 40.0% | |
GAAGTGAGAGCTTCATTTGA+TGG | + | chr6_3:82333648-82333667 | None:intergenic | 40.0% | |
! | TTGGTTGATGCCATTCACAT+TGG | - | chr6_3:82333672-82333691 | Msa0961220:three_prime_UTR | 40.0% |
ATGTCTGTAGCCAATGTGAA+TGG | + | chr6_3:82333685-82333704 | None:intergenic | 40.0% | |
! | TATGGTACTGAAGAACCTCT+AGG | - | chr6_3:82333723-82333742 | Msa0961220:CDS | 40.0% |
! | CTAAAGCTTTTGACACAGCT+TGG | + | chr6_3:82333749-82333768 | None:intergenic | 40.0% |
CACAGAACAATGCTTACTTG+AGG | + | chr6_3:82333872-82333891 | None:intergenic | 40.0% | |
! | GAATCTAAGGTTGGAGTATG+TGG | - | chr6_3:82333960-82333979 | Msa0961220:intron | 40.0% |
TGGATCTCTACTTGATTCAC+TGG | - | chr6_3:82333980-82333999 | Msa0961220:intron | 40.0% | |
! | GTTGAAGGCTTTAACTTCAC+AGG | - | chr6_3:82334024-82334043 | Msa0961220:intron | 40.0% |
CAAAAAGCTTTCCGTACTCT+TGG | - | chr6_3:82334149-82334168 | Msa0961220:intron | 40.0% | |
ATGAATCCATCATGGCAACA+AGG | - | chr6_3:82334340-82334359 | Msa0961220:CDS | 40.0% | |
TGAATCCATCATGGCAACAA+GGG | - | chr6_3:82334341-82334360 | Msa0961220:CDS | 40.0% | |
AGGGAATTCTGCATGAAGAA+AGG | - | chr6_3:82334370-82334389 | Msa0961220:CDS | 40.0% | |
AAGGAATTCATGTGTGTGCA+TGG | - | chr6_3:82334389-82334408 | Msa0961220:CDS | 40.0% | |
GATGGAGAACTCTATTCTTC+TGG | - | chr6_3:82334456-82334475 | Msa0961220:intron | 40.0% | |
ACTTATGAGAGCTCATGGAT+TGG | - | chr6_3:82334674-82334693 | Msa0961220:CDS | 40.0% | |
TCTTGCAGATAGCACTAAGA+TGG | - | chr6_3:82334877-82334896 | Msa0961220:intron | 40.0% | |
CTAAGATGGATACATGAGCA+AGG | - | chr6_3:82334891-82334910 | Msa0961220:intron | 40.0% | |
GCCTTATAAAGTCTGCATTG+TGG | + | chr6_3:82335023-82335042 | None:intergenic | 40.0% | |
AGCTCTTCCAAGGATTTGTA+AGG | + | chr6_3:82335071-82335090 | None:intergenic | 40.0% | |
TCCTAGATTTAGTCAAGCAG+AGG | - | chr6_3:82335416-82335435 | Msa0961220:five_prime_UTR | 40.0% | |
TCCTCTGCTTGACTAAATCT+AGG | + | chr6_3:82335420-82335439 | None:intergenic | 40.0% | |
GGCCCTAGATGATAAATGCA+TGG | + | chr6_3:82333344-82333363 | None:intergenic | 45.0% | |
GGAAGCAACTAAACTCCATG+AGG | - | chr6_3:82333560-82333579 | Msa0961220:three_prime_UTR | 45.0% | |
GGGGAAAAGATGCCAGTAAT+AGG | - | chr6_3:82333597-82333616 | Msa0961220:three_prime_UTR | 45.0% | |
AAGATGCCAGTAATAGGCCT+AGG | - | chr6_3:82333603-82333622 | Msa0961220:three_prime_UTR | 45.0% | |
AACAAGGTCATGGTGAGCAT+CGG | + | chr6_3:82333829-82333848 | None:intergenic | 45.0% | |
!! | GAGCATTGAGAACAAGGTCA+TGG | + | chr6_3:82333839-82333858 | None:intergenic | 45.0% |
GAACAATGCTTACTTGAGGG+TGG | + | chr6_3:82333868-82333887 | None:intergenic | 45.0% | |
! | AGGCTTTAACTTCACAGGTG+AGG | - | chr6_3:82334029-82334048 | Msa0961220:intron | 45.0% |
CAAAGGAACATGGGAAGCTA+TGG | - | chr6_3:82334071-82334090 | Msa0961220:intron | 45.0% | |
GGTTGCATTGTCCAAGAGTA+CGG | + | chr6_3:82334163-82334182 | None:intergenic | 45.0% | |
CTGATTAACTGCAGGCGAAA+TGG | + | chr6_3:82334184-82334203 | None:intergenic | 45.0% | |
CATTTCGCCTGCAGTTAATC+AGG | - | chr6_3:82334182-82334201 | Msa0961220:intron | 45.0% | |
AGTTTCCCTTGTTGCCATGA+TGG | + | chr6_3:82334349-82334368 | None:intergenic | 45.0% | |
ATGGCAACAAGGGAAACTCA+GGG | - | chr6_3:82334351-82334370 | Msa0961220:CDS | 45.0% | |
! | TTGGGGTTCTAATGCTGTGA+TGG | - | chr6_3:82334438-82334457 | Msa0961220:CDS | 45.0% |
! | TTCTGGAAATTGCTCAGGCT+AGG | - | chr6_3:82334473-82334492 | Msa0961220:intron | 45.0% |
! | TAGGAAGAAGAGTGTAGCTC+AGG | - | chr6_3:82334492-82334511 | Msa0961220:intron | 45.0% |
ACAAATCCTTGGAAGAGCTG+TGG | - | chr6_3:82335072-82335091 | Msa0961220:CDS | 45.0% | |
CAAATCCTTGGAAGAGCTGT+GGG | - | chr6_3:82335073-82335092 | Msa0961220:CDS | 45.0% | |
GGCCCTAGATGATAAATGCA+TGG | + | chr6_3:82333344-82333363 | None:intergenic | 45.0% | |
GGAAGCAACTAAACTCCATG+AGG | - | chr6_3:82333560-82333579 | Msa0961220:three_prime_UTR | 45.0% | |
GGGGAAAAGATGCCAGTAAT+AGG | - | chr6_3:82333597-82333616 | Msa0961220:three_prime_UTR | 45.0% | |
AAGATGCCAGTAATAGGCCT+AGG | - | chr6_3:82333603-82333622 | Msa0961220:three_prime_UTR | 45.0% | |
AACAAGGTCATGGTGAGCAT+CGG | + | chr6_3:82333829-82333848 | None:intergenic | 45.0% | |
!! | GAGCATTGAGAACAAGGTCA+TGG | + | chr6_3:82333839-82333858 | None:intergenic | 45.0% |
GAACAATGCTTACTTGAGGG+TGG | + | chr6_3:82333868-82333887 | None:intergenic | 45.0% | |
! | AGGCTTTAACTTCACAGGTG+AGG | - | chr6_3:82334029-82334048 | Msa0961220:intron | 45.0% |
CAAAGGAACATGGGAAGCTA+TGG | - | chr6_3:82334071-82334090 | Msa0961220:intron | 45.0% | |
GGTTGCATTGTCCAAGAGTA+CGG | + | chr6_3:82334163-82334182 | None:intergenic | 45.0% | |
CTGATTAACTGCAGGCGAAA+TGG | + | chr6_3:82334184-82334203 | None:intergenic | 45.0% | |
CATTTCGCCTGCAGTTAATC+AGG | - | chr6_3:82334182-82334201 | Msa0961220:intron | 45.0% | |
AGTTTCCCTTGTTGCCATGA+TGG | + | chr6_3:82334349-82334368 | None:intergenic | 45.0% | |
ATGGCAACAAGGGAAACTCA+GGG | - | chr6_3:82334351-82334370 | Msa0961220:CDS | 45.0% | |
! | TTGGGGTTCTAATGCTGTGA+TGG | - | chr6_3:82334438-82334457 | Msa0961220:CDS | 45.0% |
! | TTCTGGAAATTGCTCAGGCT+AGG | - | chr6_3:82334473-82334492 | Msa0961220:intron | 45.0% |
! | TAGGAAGAAGAGTGTAGCTC+AGG | - | chr6_3:82334492-82334511 | Msa0961220:intron | 45.0% |
ACAAATCCTTGGAAGAGCTG+TGG | - | chr6_3:82335072-82335091 | Msa0961220:CDS | 45.0% | |
CAAATCCTTGGAAGAGCTGT+GGG | - | chr6_3:82335073-82335092 | Msa0961220:CDS | 45.0% | |
GCAGTTCCTAGGCCTATTAC+TGG | + | chr6_3:82333612-82333631 | None:intergenic | 50.0% | |
GAGGAGATGTAGCAGTTCCT+AGG | + | chr6_3:82333623-82333642 | None:intergenic | 50.0% | |
TTTGACACAGCTTGGCCTAG+AGG | + | chr6_3:82333741-82333760 | None:intergenic | 50.0% | |
CATGGCAACAAGGGAAACTC+AGG | - | chr6_3:82334350-82334369 | Msa0961220:CDS | 50.0% | |
TGTGTGTGCATGGTCACCAT+TGG | - | chr6_3:82334399-82334418 | Msa0961220:CDS | 50.0% | |
GTGTGTGCATGGTCACCATT+GGG | - | chr6_3:82334400-82334419 | Msa0961220:CDS | 50.0% | |
TCGGAAACTCTTTCACGCTG+TGG | - | chr6_3:82335293-82335312 | Msa0961220:five_prime_UTR | 50.0% | |
CTTTCACGCTGTGGATGCTA+TGG | - | chr6_3:82335302-82335321 | Msa0961220:five_prime_UTR | 50.0% | |
GCAGTTCCTAGGCCTATTAC+TGG | + | chr6_3:82333612-82333631 | None:intergenic | 50.0% | |
GAGGAGATGTAGCAGTTCCT+AGG | + | chr6_3:82333623-82333642 | None:intergenic | 50.0% | |
TTTGACACAGCTTGGCCTAG+AGG | + | chr6_3:82333741-82333760 | None:intergenic | 50.0% | |
CATGGCAACAAGGGAAACTC+AGG | - | chr6_3:82334350-82334369 | Msa0961220:CDS | 50.0% | |
TGTGTGTGCATGGTCACCAT+TGG | - | chr6_3:82334399-82334418 | Msa0961220:CDS | 50.0% | |
GTGTGTGCATGGTCACCATT+GGG | - | chr6_3:82334400-82334419 | Msa0961220:CDS | 50.0% | |
TCGGAAACTCTTTCACGCTG+TGG | - | chr6_3:82335293-82335312 | Msa0961220:five_prime_UTR | 50.0% | |
CTTTCACGCTGTGGATGCTA+TGG | - | chr6_3:82335302-82335321 | Msa0961220:five_prime_UTR | 50.0% | |
TCCTTGGAAGAGCTGTGGGA+TGG | - | chr6_3:82335077-82335096 | Msa0961220:CDS | 55.0% | |
ACCATCCCACAGCTCTTCCA+AGG | + | chr6_3:82335081-82335100 | None:intergenic | 55.0% | |
TCCTTGGAAGAGCTGTGGGA+TGG | - | chr6_3:82335077-82335096 | Msa0961220:CDS | 55.0% | |
ACCATCCCACAGCTCTTCCA+AGG | + | chr6_3:82335081-82335100 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_3 | gene | 82333296 | 82335510 | 82333296 | ID=Msa0961220;Name=Msa0961220 |
chr6_3 | mRNA | 82333296 | 82335510 | 82333296 | ID=Msa0961220-mRNA-1;Parent=Msa0961220;Name=Msa0961220-mRNA-1;_AED=0.29;_eAED=0.29;_QI=262|1|1|1|1|1|4|401|321 |
chr6_3 | exon | 82333296 | 82333921 | 82333296 | ID=Msa0961220-mRNA-1:exon:14727;Parent=Msa0961220-mRNA-1 |
chr6_3 | exon | 82334293 | 82334472 | 82334293 | ID=Msa0961220-mRNA-1:exon:14726;Parent=Msa0961220-mRNA-1 |
chr6_3 | exon | 82334603 | 82334846 | 82334603 | ID=Msa0961220-mRNA-1:exon:14725;Parent=Msa0961220-mRNA-1 |
chr6_3 | exon | 82334932 | 82335510 | 82334932 | ID=Msa0961220-mRNA-1:exon:14724;Parent=Msa0961220-mRNA-1 |
chr6_3 | five_prime_UTR | 82335249 | 82335510 | 82335249 | ID=Msa0961220-mRNA-1:five_prime_utr;Parent=Msa0961220-mRNA-1 |
chr6_3 | CDS | 82334932 | 82335248 | 82334932 | ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1 |
chr6_3 | CDS | 82334603 | 82334846 | 82334603 | ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1 |
chr6_3 | CDS | 82334293 | 82334472 | 82334293 | ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1 |
chr6_3 | CDS | 82333697 | 82333921 | 82333697 | ID=Msa0961220-mRNA-1:cds;Parent=Msa0961220-mRNA-1 |
chr6_3 | three_prime_UTR | 82333296 | 82333696 | 82333296 | ID=Msa0961220-mRNA-1:three_prime_utr;Parent=Msa0961220-mRNA-1 |
Gene Sequence |
Protein sequence |