Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377170 | XP_003597045.2 | 87.500 | 72 | 9 | 0 | 1 | 72 | 1 | 72 | 1.55e-33 | 131 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377170 | G7IKM6 | 87.500 | 72 | 9 | 0 | 1 | 72 | 1 | 72 | 7.42e-34 | 131 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000220 | Msa1377170 | 0.812019 | 5.233539e-51 | -8.615850e-47 |
| Msa0003370 | Msa1377170 | 0.819034 | 1.435366e-52 | -8.615850e-47 |
| Msa0016830 | Msa1377170 | 0.821847 | 3.248301e-53 | -8.615850e-47 |
| Msa0025060 | Msa1377170 | 0.802880 | 4.546863e-49 | -8.615850e-47 |
| Msa0026120 | Msa1377170 | 0.811897 | 5.563730e-51 | -8.615850e-47 |
| Msa0028410 | Msa1377170 | 0.807466 | 4.986797e-50 | -8.615850e-47 |
| Msa0028450 | Msa1377170 | 0.812058 | 5.131205e-51 | -8.615850e-47 |
| Msa0030710 | Msa1377170 | 0.812334 | 4.467975e-51 | -8.615850e-47 |
| Msa0034800 | Msa1377170 | 0.810141 | 1.336060e-50 | -8.615850e-47 |
| Msa0035090 | Msa1377170 | 0.806668 | 7.354618e-50 | -8.615850e-47 |
| Msa0040190 | Msa1377170 | 0.816846 | 4.480858e-52 | -8.615850e-47 |
| Msa0050400 | Msa1377170 | 0.803598 | 3.230230e-49 | -8.615850e-47 |
| Msa0050850 | Msa1377170 | 0.806135 | 9.527849e-50 | -8.615850e-47 |
| Msa0065190 | Msa1377170 | 0.811229 | 7.771341e-51 | -8.615850e-47 |
| Msa0074310 | Msa1377170 | 0.822165 | 2.741402e-53 | -8.615850e-47 |
| Msa0079550 | Msa1377170 | 0.802311 | 5.957120e-49 | -8.615850e-47 |
| Msa0083200 | Msa1377170 | 0.837041 | 6.569175e-57 | -8.615850e-47 |
| Msa0089410 | Msa1377170 | 0.821631 | 3.642675e-53 | -8.615850e-47 |
| Msa0092750 | Msa1377170 | 0.852382 | 4.789825e-61 | -8.615850e-47 |
| Msa0095190 | Msa1377170 | 0.813844 | 2.083126e-51 | -8.615850e-47 |
| Msa0112800 | Msa1377170 | 0.824292 | 8.736484e-54 | -8.615850e-47 |
| Msa0114960 | Msa1377170 | 0.846488 | 2.105404e-59 | -8.615850e-47 |
| Msa0118250 | Msa1377170 | 0.800670 | 1.292766e-48 | -8.615850e-47 |
| Msa1351560 | Msa1377170 | 0.832179 | 1.095368e-55 | -8.615850e-47 |
| Msa1371250 | Msa1377170 | 0.801266 | 9.765237e-49 | -8.615850e-47 |
| Msa1374610 | Msa1377170 | 0.807325 | 5.342074e-50 | -8.615850e-47 |
| Msa1377160 | Msa1377170 | 0.864990 | 8.166860e-65 | -8.615850e-47 |
| Msa1377170 | Msa1380590 | 0.802478 | 5.505104e-49 | -8.615850e-47 |
| Msa1377170 | Msa1382640 | -0.801850 | 7.410637e-49 | -8.615850e-47 |
| Msa1377170 | Msa1385940 | 0.824162 | 9.373921e-54 | -8.615850e-47 |
| Msa1377170 | Msa1393600 | 0.803235 | 3.839733e-49 | -8.615850e-47 |
| Msa1377170 | Msa1397550 | 0.830205 | 3.347908e-55 | -8.615850e-47 |
| Msa1377170 | Msa1400330 | 0.812040 | 5.178179e-51 | -8.615850e-47 |
| Msa1377170 | Msa1400600 | 0.839811 | 1.267662e-57 | -8.615850e-47 |
| Msa1377170 | Msa1400940 | -0.816988 | 4.163591e-52 | -8.615850e-47 |
| Msa1377170 | Msa1415120 | 0.809320 | 2.005419e-50 | -8.615850e-47 |
| Msa1377170 | Msa1419040 | 0.813036 | 3.136180e-51 | -8.615850e-47 |
| Msa1377170 | Msa1420630 | 0.833679 | 4.644311e-56 | -8.615850e-47 |
| Msa1377170 | Msa1425050 | 0.814382 | 1.585024e-51 | -8.615850e-47 |
| Msa1377170 | Msa1425570 | 0.832888 | 7.310866e-56 | -8.615850e-47 |
| Msa1377170 | Msa1433650 | 0.822920 | 1.829496e-53 | -8.615850e-47 |
| Msa1377170 | Msa1438420 | 0.802534 | 5.361490e-49 | -8.615850e-47 |
| Msa0619480 | Msa1377170 | 0.837583 | 4.771482e-57 | -8.615850e-47 |
| Msa0622400 | Msa1377170 | 0.813151 | 2.958674e-51 | -8.615850e-47 |
| Msa0624890 | Msa1377170 | 0.856157 | 3.890020e-62 | -8.615850e-47 |
| Msa0626890 | Msa1377170 | 0.815620 | 8.420741e-52 | -8.615850e-47 |
| Msa0641970 | Msa1377170 | 0.856173 | 3.847239e-62 | -8.615850e-47 |
| Msa0648410 | Msa1377170 | 0.829576 | 4.765634e-55 | -8.615850e-47 |
| Msa0659130 | Msa1377170 | 0.811539 | 6.657481e-51 | -8.615850e-47 |
| Msa0659640 | Msa1377170 | 0.832621 | 8.517435e-56 | -8.615850e-47 |
| Msa0665010 | Msa1377170 | 0.854500 | 1.180713e-61 | -8.615850e-47 |
| Msa0667710 | Msa1377170 | 0.835431 | 1.685136e-56 | -8.615850e-47 |
| Msa0670490 | Msa1377170 | 0.812090 | 5.049138e-51 | -8.615850e-47 |
| Msa0677110 | Msa1377170 | 0.800588 | 1.343203e-48 | -8.615850e-47 |
| Msa0677590 | Msa1377170 | 0.803896 | 2.800771e-49 | -8.615850e-47 |
| Msa0681040 | Msa1377170 | 0.830160 | 3.433506e-55 | -8.615850e-47 |
| Msa0688350 | Msa1377170 | 0.817113 | 3.901620e-52 | -8.615850e-47 |
| Msa0690920 | Msa1377170 | 0.830683 | 2.558163e-55 | -8.615850e-47 |
| Msa0694170 | Msa1377170 | 0.823720 | 1.189951e-53 | -8.615850e-47 |
| Msa0698880 | Msa1377170 | 0.803382 | 3.580804e-49 | -8.615850e-47 |
| Msa0704750 | Msa1377170 | 0.835444 | 1.672612e-56 | -8.615850e-47 |
| Msa0705610 | Msa1377170 | 0.820603 | 6.286041e-53 | -8.615850e-47 |
| Msa0706710 | Msa1377170 | 0.805156 | 1.529417e-49 | -8.615850e-47 |
| Msa0707870 | Msa1377170 | 0.815563 | 8.671027e-52 | -8.615850e-47 |
| Msa0713530 | Msa1377170 | 0.814002 | 1.922864e-51 | -8.615850e-47 |
| Msa0727020 | Msa1377170 | 0.802910 | 4.484024e-49 | -8.615850e-47 |
| Msa0741710 | Msa1377170 | 0.828168 | 1.044455e-54 | -8.615850e-47 |
| Msa0755590 | Msa1377170 | 0.822503 | 2.287796e-53 | -8.615850e-47 |
| Msa0762390 | Msa1377170 | 0.807283 | 5.450916e-50 | -8.615850e-47 |
| Msa0762470 | Msa1377170 | 0.806196 | 9.252082e-50 | -8.615850e-47 |
| Msa0781900 | Msa1377170 | 0.800139 | 1.657836e-48 | -8.615850e-47 |
| Msa0794040 | Msa1377170 | 0.820528 | 6.540503e-53 | -8.615850e-47 |
| Msa0797240 | Msa1377170 | 0.804117 | 2.519926e-49 | -8.615850e-47 |
| Msa0797810 | Msa1377170 | 0.817306 | 3.530627e-52 | -8.615850e-47 |
| Msa0822800 | Msa1377170 | 0.811574 | 6.540876e-51 | -8.615850e-47 |
| Msa0827560 | Msa1377170 | 0.803931 | 2.754817e-49 | -8.615850e-47 |
| Msa0834160 | Msa1377170 | 0.805382 | 1.371775e-49 | -8.615850e-47 |
| Msa0835010 | Msa1377170 | 0.820320 | 7.298763e-53 | -8.615850e-47 |
| Msa0839730 | Msa1377170 | 0.834454 | 2.968792e-56 | -8.615850e-47 |
| Msa0124070 | Msa1377170 | 0.815270 | 1.007405e-51 | -8.615850e-47 |
| Msa0130120 | Msa1377170 | 0.801507 | 8.716232e-49 | -8.615850e-47 |
| Msa0134550 | Msa1377170 | 0.816160 | 6.381232e-52 | -8.615850e-47 |
| Msa0136520 | Msa1377170 | 0.829077 | 6.297472e-55 | -8.615850e-47 |
| Msa0138380 | Msa1377170 | 0.820378 | 7.078801e-53 | -8.615850e-47 |
| Msa0146570 | Msa1377170 | 0.813968 | 1.956603e-51 | -8.615850e-47 |
| Msa0156780 | Msa1377170 | 0.819513 | 1.116252e-52 | -8.615850e-47 |
| Msa0166580 | Msa1377170 | 0.818901 | 1.539054e-52 | -8.615850e-47 |
| Msa0175480 | Msa1377170 | 0.836389 | 9.627638e-57 | -8.615850e-47 |
| Msa0186750 | Msa1377170 | 0.811535 | 6.668741e-51 | -8.615850e-47 |
| Msa0187720 | Msa1377170 | 0.814049 | 1.877967e-51 | -8.615850e-47 |
| Msa0192290 | Msa1377170 | -0.822481 | 2.314605e-53 | -8.615850e-47 |
| Msa0197600 | Msa1377170 | 0.830649 | 2.607154e-55 | -8.615850e-47 |
| Msa0198140 | Msa1377170 | 0.804991 | 1.656085e-49 | -8.615850e-47 |
| Msa0198220 | Msa1377170 | 0.808593 | 2.869361e-50 | -8.615850e-47 |
| Msa0201910 | Msa1377170 | 0.858624 | 7.251569e-63 | -8.615850e-47 |
| Msa0206600 | Msa1377170 | 0.836043 | 1.178810e-56 | -8.615850e-47 |
| Msa0207220 | Msa1377170 | 0.842599 | 2.343917e-58 | -8.615850e-47 |
| Msa0207530 | Msa1377170 | 0.811029 | 8.588159e-51 | -8.615850e-47 |
| Msa0207900 | Msa1377170 | 0.803902 | 2.792240e-49 | -8.615850e-47 |
| Msa0207990 | Msa1377170 | 0.809438 | 1.891931e-50 | -8.615850e-47 |
| Msa0216010 | Msa1377170 | 0.817284 | 3.571503e-52 | -8.615850e-47 |
| Msa0219140 | Msa1377170 | 0.804128 | 2.506831e-49 | -8.615850e-47 |
| Msa0219820 | Msa1377170 | 0.826584 | 2.504174e-54 | -8.615850e-47 |
| Msa0225050 | Msa1377170 | 0.820043 | 8.448929e-53 | -8.615850e-47 |
| Msa1227090 | Msa1377170 | 0.811738 | 6.025757e-51 | -8.615850e-47 |
| Msa1235050 | Msa1377170 | 0.810501 | 1.116835e-50 | -8.615850e-47 |
| Msa1251830 | Msa1377170 | 0.806458 | 8.144437e-50 | -8.615850e-47 |
| Msa1251890 | Msa1377170 | 0.819143 | 1.356023e-52 | -8.615850e-47 |
| Msa1251960 | Msa1377170 | 0.833536 | 5.040192e-56 | -8.615850e-47 |
| Msa1252040 | Msa1377170 | 0.802835 | 4.646943e-49 | -8.615850e-47 |
| Msa1252220 | Msa1377170 | 0.801255 | 9.815428e-49 | -8.615850e-47 |
| Msa1257170 | Msa1377170 | -0.841502 | 4.569957e-58 | -8.615850e-47 |
| Msa1258600 | Msa1377170 | -0.814629 | 1.397543e-51 | -8.615850e-47 |
| Msa1264230 | Msa1377170 | 0.824468 | 7.939263e-54 | -8.615850e-47 |
| Msa1267800 | Msa1377170 | 0.849913 | 2.382031e-60 | -8.615850e-47 |
| Msa1279240 | Msa1377170 | 0.841735 | 3.969040e-58 | -8.615850e-47 |
| Msa1285870 | Msa1377170 | 0.800527 | 1.382077e-48 | -8.615850e-47 |
| Msa1302120 | Msa1377170 | -0.846102 | 2.680760e-59 | -8.615850e-47 |
| Msa1302920 | Msa1377170 | 0.834741 | 2.514745e-56 | -8.615850e-47 |
| Msa1317340 | Msa1377170 | 0.806743 | 7.091364e-50 | -8.615850e-47 |
| Msa1330910 | Msa1377170 | 0.808958 | 2.398385e-50 | -8.615850e-47 |
| Msa1332180 | Msa1377170 | 0.818453 | 1.945082e-52 | -8.615850e-47 |
| Msa1343540 | Msa1377170 | 0.839179 | 1.849506e-57 | -8.615850e-47 |
| Msa0372550 | Msa1377170 | 0.821703 | 3.506787e-53 | -8.615850e-47 |
| Msa0374230 | Msa1377170 | 0.802425 | 5.645985e-49 | -8.615850e-47 |
| Msa0377460 | Msa1377170 | 0.806201 | 9.230246e-50 | -8.615850e-47 |
| Msa0377690 | Msa1377170 | 0.814673 | 1.366470e-51 | -8.615850e-47 |
| Msa0379900 | Msa1377170 | 0.817928 | 2.556576e-52 | -8.615850e-47 |
| Msa0398630 | Msa1377170 | 0.826691 | 2.360669e-54 | -8.615850e-47 |
| Msa0403670 | Msa1377170 | 0.804855 | 1.768114e-49 | -8.615850e-47 |
| Msa0404330 | Msa1377170 | 0.824662 | 7.150485e-54 | -8.615850e-47 |
| Msa0404860 | Msa1377170 | 0.814478 | 1.509435e-51 | -8.615850e-47 |
| Msa0404880 | Msa1377170 | 0.807348 | 5.281283e-50 | -8.615850e-47 |
| Msa0405040 | Msa1377170 | 0.812775 | 3.578124e-51 | -8.615850e-47 |
| Msa0426680 | Msa1377170 | 0.840935 | 6.443279e-58 | -8.615850e-47 |
| Msa0426890 | Msa1377170 | 0.815111 | 1.092583e-51 | -8.615850e-47 |
| Msa0426990 | Msa1377170 | 0.817208 | 3.714671e-52 | -8.615850e-47 |
| Msa0443250 | Msa1377170 | 0.811088 | 8.339184e-51 | -8.615850e-47 |
| Msa0453310 | Msa1377170 | 0.824465 | 7.954204e-54 | -8.615850e-47 |
| Msa0468050 | Msa1377170 | -0.800963 | 1.126009e-48 | -8.615850e-47 |
| Msa0472870 | Msa1377170 | 0.801299 | 9.612855e-49 | -8.615850e-47 |
| Msa0473320 | Msa1377170 | 0.809805 | 1.578132e-50 | -8.615850e-47 |
| Msa1002660 | Msa1377170 | 0.812162 | 4.871054e-51 | -8.615850e-47 |
| Msa1037570 | Msa1377170 | 0.821018 | 5.046476e-53 | -8.615850e-47 |
| Msa1040030 | Msa1377170 | 0.801731 | 7.841926e-49 | -8.615850e-47 |
| Msa1041620 | Msa1377170 | 0.813309 | 2.732045e-51 | -8.615850e-47 |
| Msa1069600 | Msa1377170 | 0.805187 | 1.506928e-49 | -8.615850e-47 |
| Msa1081650 | Msa1377170 | 0.800762 | 1.237743e-48 | -8.615850e-47 |
| Msa1084630 | Msa1377170 | 0.810658 | 1.033105e-50 | -8.615850e-47 |
| Msa1086260 | Msa1377170 | 0.803272 | 3.772556e-49 | -8.615850e-47 |
| Msa0240290 | Msa1377170 | 0.828204 | 1.023775e-54 | -8.615850e-47 |
| Msa0240460 | Msa1377170 | 0.819746 | 9.878188e-53 | -8.615850e-47 |
| Msa0244370 | Msa1377170 | 0.827267 | 1.718906e-54 | -8.615850e-47 |
| Msa0256170 | Msa1377170 | 0.812814 | 3.507449e-51 | -8.615850e-47 |
| Msa0266120 | Msa1377170 | 0.815212 | 1.037657e-51 | -8.615850e-47 |
| Msa0268310 | Msa1377170 | 0.803639 | 3.166492e-49 | -8.615850e-47 |
| Msa0268760 | Msa1377170 | 0.811596 | 6.467665e-51 | -8.615850e-47 |
| Msa0278340 | Msa1377170 | 0.806831 | 6.795625e-50 | -8.615850e-47 |
| Msa0282880 | Msa1377170 | 0.854783 | 9.779776e-62 | -8.615850e-47 |
| Msa0288270 | Msa1377170 | 0.821549 | 3.805549e-53 | -8.615850e-47 |
| Msa0288280 | Msa1377170 | 0.849198 | 3.770496e-60 | -8.615850e-47 |
| Msa0298590 | Msa1377170 | 0.802071 | 6.675208e-49 | -8.615850e-47 |
| Msa0301800 | Msa1377170 | 0.810858 | 9.350089e-51 | -8.615850e-47 |
| Msa0304040 | Msa1377170 | 0.809758 | 1.615267e-50 | -8.615850e-47 |
| Msa0307490 | Msa1377170 | 0.846752 | 1.782448e-59 | -8.615850e-47 |
| Msa0313050 | Msa1377170 | -0.826146 | 3.184084e-54 | -8.615850e-47 |
| Msa0317630 | Msa1377170 | 0.832251 | 1.051563e-55 | -8.615850e-47 |
| Msa0321180 | Msa1377170 | 0.838027 | 3.669946e-57 | -8.615850e-47 |
| Msa0321200 | Msa1377170 | 0.843227 | 1.594778e-58 | -8.615850e-47 |
| Msa0344300 | Msa1377170 | 0.802578 | 5.249231e-49 | -8.615850e-47 |
| Msa1124180 | Msa1377170 | 0.809534 | 1.804712e-50 | -8.615850e-47 |
| Msa1129130 | Msa1377170 | 0.801051 | 1.080353e-48 | -8.615850e-47 |
| Msa1129470 | Msa1377170 | 0.811316 | 7.442727e-51 | -8.615850e-47 |
| Msa1130700 | Msa1377170 | 0.832455 | 9.363566e-56 | -8.615850e-47 |
| Msa1131010 | Msa1377170 | 0.820105 | 8.178615e-53 | -8.615850e-47 |
| Msa1132320 | Msa1377170 | 0.825323 | 4.991393e-54 | -8.615850e-47 |
| Msa1166520 | Msa1377170 | 0.809366 | 1.960260e-50 | -8.615850e-47 |
| Msa1167820 | Msa1377170 | 0.814838 | 1.256095e-51 | -8.615850e-47 |
| Msa1173410 | Msa1377170 | 0.821525 | 3.854853e-53 | -8.615850e-47 |
| Msa1182950 | Msa1377170 | 0.814190 | 1.747590e-51 | -8.615850e-47 |
| Msa1182960 | Msa1377170 | 0.852899 | 3.410728e-61 | -8.615850e-47 |
| Msa1186010 | Msa1377170 | 0.813818 | 2.111312e-51 | -8.615850e-47 |
| Msa1197210 | Msa1377170 | 0.820755 | 5.800315e-53 | -8.615850e-47 |
| Msa1198280 | Msa1377170 | 0.802105 | 6.568057e-49 | -8.615850e-47 |
| Msa1199690 | Msa1377170 | 0.843857 | 1.082468e-58 | -8.615850e-47 |
| Msa1203090 | Msa1377170 | 0.806935 | 6.459824e-50 | -8.615850e-47 |
| Msa1203840 | Msa1377170 | 0.827636 | 1.401981e-54 | -8.615850e-47 |
| Msa1203860 | Msa1377170 | 0.827190 | 1.793482e-54 | -8.615850e-47 |
| Msa1207000 | Msa1377170 | -0.847265 | 1.290030e-59 | -8.615850e-47 |
| Msa1207090 | Msa1377170 | -0.845389 | 4.188272e-59 | -8.615850e-47 |
| Msa1211880 | Msa1377170 | 0.806503 | 7.968907e-50 | -8.615850e-47 |
| Msa1215660 | Msa1377170 | 0.805775 | 1.134263e-49 | -8.615850e-47 |
| Msa0498070 | Msa1377170 | 0.802953 | 4.392913e-49 | -8.615850e-47 |
| Msa0498320 | Msa1377170 | 0.806117 | 9.614101e-50 | -8.615850e-47 |
| Msa0515420 | Msa1377170 | 0.810604 | 1.061109e-50 | -8.615850e-47 |
| Msa0516340 | Msa1377170 | 0.804345 | 2.259165e-49 | -8.615850e-47 |
| Msa0517400 | Msa1377170 | 0.803382 | 3.580343e-49 | -8.615850e-47 |
| Msa0532910 | Msa1377170 | 0.833459 | 5.267884e-56 | -8.615850e-47 |
| Msa0545910 | Msa1377170 | 0.821997 | 2.998819e-53 | -8.615850e-47 |
| Msa0568810 | Msa1377170 | 0.807695 | 4.457755e-50 | -8.615850e-47 |
| Msa0569630 | Msa1377170 | 0.842296 | 2.819251e-58 | -8.615850e-47 |
| Msa0571220 | Msa1377170 | 0.845560 | 3.762459e-59 | -8.615850e-47 |
| Msa0574230 | Msa1377170 | 0.810298 | 1.235922e-50 | -8.615850e-47 |
| Msa0576510 | Msa1377170 | 0.813700 | 2.241822e-51 | -8.615850e-47 |
| Msa0577140 | Msa1377170 | 0.843571 | 1.291075e-58 | -8.615850e-47 |
| Msa0587060 | Msa1377170 | 0.854600 | 1.104609e-61 | -8.615850e-47 |
| Msa0595240 | Msa1377170 | 0.837006 | 6.705149e-57 | -8.615850e-47 |
| Msa0601710 | Msa1377170 | 0.810242 | 1.270606e-50 | -8.615850e-47 |
| Msa0844330 | Msa1377170 | 0.810116 | 1.352448e-50 | -8.615850e-47 |
| Msa0862750 | Msa1377170 | 0.806260 | 8.970055e-50 | -8.615850e-47 |
| Msa0875130 | Msa1377170 | 0.809605 | 1.742335e-50 | -8.615850e-47 |
| Msa0880370 | Msa1377170 | 0.826957 | 2.039628e-54 | -8.615850e-47 |
| Msa0883880 | Msa1377170 | 0.837216 | 5.922947e-57 | -8.615850e-47 |
| Msa0894580 | Msa1377170 | 0.842125 | 3.129278e-58 | -8.615850e-47 |
| Msa0911440 | Msa1377170 | 0.815300 | 9.922500e-52 | -8.615850e-47 |
| Msa0911490 | Msa1377170 | 0.816657 | 4.939287e-52 | -8.615850e-47 |
| Msa0946570 | Msa1377170 | 0.814482 | 1.506674e-51 | -8.615850e-47 |
| Msa0967260 | Msa1377170 | 0.803743 | 3.013477e-49 | -8.615850e-47 |
| Msa0967920 | Msa1377170 | 0.806627 | 7.504375e-50 | -8.615850e-47 |
| Msa0976950 | Msa1377170 | 0.833182 | 6.178596e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1377170 | MtrunA17_Chr2g0323051 | 87.500 | 72 | 9 | 0 | 1 | 72 | 1 | 72 | 1.43e-37 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 27 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTGCTTTGTTCTTGAATT+TGG | 0.098697 | tig0019874:+55327 | None:intergenic |
| CAGTGTTGGTTCTTCATTCA+TGG | 0.286766 | tig0019874:+55624 | None:intergenic |
| CATGAAGAAACGAGTGAAAA+AGG | 0.295336 | tig0019874:-55699 | None:intergenic |
| TATATGCATTGAAGTGCTTA+AGG | 0.345801 | tig0019874:-55484 | Msa1377170:five_prime_UTR |
| ATGAATATTATCAAATTTGA+AGG | 0.373538 | tig0019874:+55305 | None:intergenic |
| CCTTATTTATCTATGATCAT+TGG | 0.375895 | tig0019874:-55648 | Msa1377170:five_prime_UTR |
| TTCGTATAATTTGCAACATT+AGG | 0.381270 | tig0019874:-55461 | Msa1377170:five_prime_UTR |
| CCAATGATCATAGATAAATA+AGG | 0.417804 | tig0019874:+55648 | None:intergenic |
| GATAAAATGGTTACCTCTGC+AGG | 0.461646 | tig0019874:+55216 | None:intergenic |
| TTGTTGTGTTTGTGTAATGA+AGG | 0.462695 | tig0019874:+55536 | None:intergenic |
| TTTATGTGTTTCCTAAAACT+TGG | 0.489544 | tig0019874:-55588 | Msa1377170:five_prime_UTR |
| ATTTGCAACATTAGGAGGAA+AGG | 0.504203 | tig0019874:-55453 | Msa1377170:five_prime_UTR |
| GTTAATTAGTGTATAAAATG+AGG | 0.528418 | tig0019874:-55431 | Msa1377170:exon |
| TGTTGTGTTTGTGTAATGAA+GGG | 0.535913 | tig0019874:+55537 | None:intergenic |
| GTATAATTTGCAACATTAGG+AGG | 0.545524 | tig0019874:-55458 | Msa1377170:five_prime_UTR |
| AAACACATAAATAAGAGAAG+TGG | 0.573088 | tig0019874:+55600 | None:intergenic |
| ATAAGAGAAGTGGACAGTGT+TGG | 0.612446 | tig0019874:+55610 | None:intergenic |
| AGCAATTGCTGAACCTGCAG+AGG | 0.618481 | tig0019874:-55229 | Msa1377170:intron |
| CTATACGTGCAGATAGAGCA+AGG | 0.627427 | tig0019874:-55353 | Msa1377170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GATTATTTTTATAATATACA+TGG | + | tig0019874:55224-55243 | None:intergenic | 10.0% |
| !! | ATGAATATTATCAAATTTGA+AGG | + | tig0019874:55483-55502 | None:intergenic | 15.0% |
| !!! | TATAATTATTTGCTACTATA+TGG | + | tig0019874:55607-55626 | None:intergenic | 15.0% |
| !! | GTTAATTAGTGTATAAAATG+AGG | - | tig0019874:55354-55373 | Msa1377170:CDS | 20.0% |
| !! | GAAAGGAAAATATGATAAAA+TGG | + | tig0019874:55585-55604 | None:intergenic | 20.0% |
| ! | CCAATGATCATAGATAAATA+AGG | + | tig0019874:55140-55159 | None:intergenic | 25.0% |
| !! | CCTTATTTATCTATGATCAT+TGG | - | tig0019874:55137-55156 | Msa1377170:intron | 25.0% |
| ! | AAACACATAAATAAGAGAAG+TGG | + | tig0019874:55188-55207 | None:intergenic | 25.0% |
| ! | TTTATGTGTTTCCTAAAACT+TGG | - | tig0019874:55197-55216 | Msa1377170:intron | 25.0% |
| !! | TTCGTATAATTTGCAACATT+AGG | - | tig0019874:55324-55343 | Msa1377170:CDS | 25.0% |
| !! | TTATTTGCTACTATATGGAA+AGG | + | tig0019874:55602-55621 | None:intergenic | 25.0% |
| ! | ATATACATGGACCAAGTTTT+AGG | + | tig0019874:55211-55230 | None:intergenic | 30.0% |
| TGTTGTGTTTGTGTAATGAA+GGG | + | tig0019874:55251-55270 | None:intergenic | 30.0% | |
| TTGTTGTGTTTGTGTAATGA+AGG | + | tig0019874:55252-55271 | None:intergenic | 30.0% | |
| ! | TATATGCATTGAAGTGCTTA+AGG | - | tig0019874:55301-55320 | Msa1377170:CDS | 30.0% |
| ! | GTATAATTTGCAACATTAGG+AGG | - | tig0019874:55327-55346 | Msa1377170:CDS | 30.0% |
| !!! | TTCACGAAAGGTATTTTCAA+AGG | - | tig0019874:55399-55418 | Msa1377170:CDS | 30.0% |
| ATTTGCAACATTAGGAGGAA+AGG | - | tig0019874:55332-55351 | Msa1377170:CDS | 35.0% | |
| ! | GACGACGATTAATACTTTTG+AGG | - | tig0019874:55376-55395 | Msa1377170:CDS | 35.0% |
| !!! | ATACTTTTGAGGTTCACGAA+AGG | - | tig0019874:55387-55406 | Msa1377170:CDS | 35.0% |
| ! | GCTTGCTTTGTTCTTGAATT+TGG | + | tig0019874:55461-55480 | None:intergenic | 35.0% |
| ! | AAAAAGGACACACTGACTGA+CGG | - | tig0019874:55102-55121 | Msa1377170:CDS | 40.0% |
| !! | CAGTGTTGGTTCTTCATTCA+TGG | + | tig0019874:55164-55183 | None:intergenic | 40.0% |
| ATAAGAGAAGTGGACAGTGT+TGG | + | tig0019874:55178-55197 | None:intergenic | 40.0% | |
| GATAAAATGGTTACCTCTGC+AGG | + | tig0019874:55572-55591 | None:intergenic | 40.0% | |
| CTATACGTGCAGATAGAGCA+AGG | - | tig0019874:55432-55451 | Msa1377170:exon | 45.0% | |
| AGCAATTGCTGAACCTGCAG+AGG | - | tig0019874:55556-55575 | Msa1377170:five_prime_UTR | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0019874 | gene | 55100 | 55707 | 55100 | ID=Msa1377170;Name=Msa1377170 |
| tig0019874 | mRNA | 55100 | 55707 | 55100 | ID=Msa1377170-mRNA-1;Parent=Msa1377170;Name=Msa1377170-mRNA-1;_AED=0.46;_eAED=0.46;_QI=271|0|0.5|0.5|1|1|2|0|79 |
| tig0019874 | exon | 55100 | 55132 | 55100 | ID=Msa1377170-mRNA-1:exon:5553;Parent=Msa1377170-mRNA-1 |
| tig0019874 | exon | 55230 | 55707 | 55230 | ID=Msa1377170-mRNA-1:exon:5552;Parent=Msa1377170-mRNA-1 |
| tig0019874 | five_prime_UTR | 55437 | 55707 | 55437 | ID=Msa1377170-mRNA-1:five_prime_utr;Parent=Msa1377170-mRNA-1 |
| tig0019874 | CDS | 55230 | 55436 | 55230 | ID=Msa1377170-mRNA-1:cds;Parent=Msa1377170-mRNA-1 |
| tig0019874 | CDS | 55100 | 55132 | 55100 | ID=Msa1377170-mRNA-1:cds;Parent=Msa1377170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
