AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1137240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137240 MtrunA17_Chr7g0218341 100.000 270 0 0 228 497 441 710 0.0 560
Msa1137240 MtrunA17_Chr7g0218341 97.046 237 7 0 1 237 1 237 2.92e-161 474
Msa1137240 MtrunA17_Chr8g0360821 57.401 277 106 2 228 494 393 667 3.18e-109 338
Msa1137240 MtrunA17_Chr8g0360821 45.528 123 63 3 110 231 63 182 1.81e-23 104
Msa1137240 MtrunA17_Chr2g0318561 55.235 277 112 2 228 494 216 490 1.08e-104 322
Msa1137240 MtrunA17_Chr3g0139071 41.296 247 142 2 228 472 402 647 4.11e-60 210
Msa1137240 MtrunA17_Chr3g0139071 39.259 135 77 2 108 239 72 204 1.69e-18 89.0
Msa1137240 MtrunA17_Chr2g0305771 41.935 248 141 2 228 473 372 618 6.92e-60 209
Msa1137240 MtrunA17_Chr2g0305771 37.681 138 81 2 108 242 42 177 1.53e-18 89.0
Msa1137240 MtrunA17_Chr4g0001481 41.880 234 133 2 228 459 429 661 2.31e-58 205
Msa1137240 MtrunA17_Chr4g0001481 31.373 153 94 3 99 243 83 232 3.81e-15 78.2
Msa1137240 MtrunA17_Chr3g0126541 41.880 234 133 2 228 459 402 634 5.83e-58 204
Msa1137240 MtrunA17_Chr3g0126541 37.405 131 79 2 107 237 79 206 1.24e-19 92.4
Msa1137240 MtrunA17_Chr1g0158861 41.176 238 135 4 228 462 404 639 1.08e-57 203
Msa1137240 MtrunA17_Chr1g0158861 35.461 141 88 2 102 242 76 213 2.67e-19 91.3
Msa1137240 MtrunA17_Chr4g0073941 42.308 234 132 2 228 459 424 656 2.70e-57 202
Msa1137240 MtrunA17_Chr4g0073941 40.984 122 69 2 108 229 98 216 2.81e-19 91.3
Msa1137240 MtrunA17_Chr7g0275581 41.453 234 135 1 228 459 407 640 3.07e-57 202
Msa1137240 MtrunA17_Chr7g0275581 31.056 161 102 4 80 235 50 206 8.08e-17 83.6
Msa1137240 MtrunA17_Chr3g0125651 40.928 237 137 2 228 462 364 599 5.03e-56 198
Msa1137240 MtrunA17_Chr3g0125651 35.862 145 86 3 91 235 21 158 6.83e-15 77.4
Msa1137240 MtrunA17_Chr4g0028861 40.249 241 139 4 228 465 445 683 1.33e-54 194
Msa1137240 MtrunA17_Chr4g0028861 33.594 128 81 2 108 235 123 246 1.31e-16 82.8
Msa1137240 MtrunA17_Chr2g0326871 38.554 249 148 4 228 473 398 644 1.79e-54 194
Msa1137240 MtrunA17_Chr2g0326871 38.168 131 77 3 109 239 77 203 5.89e-17 84.0
Msa1137240 MtrunA17_Chr1g0181121 40.726 248 144 2 228 473 365 611 2.06e-54 194
Msa1137240 MtrunA17_Chr1g0181121 40.945 127 71 2 109 235 44 166 7.06e-22 99.4
Msa1137240 MtrunA17_Chr8g0347121 35.821 268 139 2 228 462 386 653 1.60e-52 189
Msa1137240 MtrunA17_Chr8g0347121 31.724 145 94 3 91 235 44 183 1.61e-14 76.3
Msa1137240 MtrunA17_Chr7g0228181 38.397 237 143 2 228 462 372 607 9.17e-52 186
Msa1137240 MtrunA17_Chr7g0228181 35.606 132 81 2 108 239 43 170 5.18e-18 87.4
Msa1137240 MtrunA17_Chr6g0481021 37.652 247 139 5 228 464 451 692 2.41e-41 157
Msa1137240 MtrunA17_Chr6g0481021 37.209 129 78 2 109 237 123 248 8.30e-20 92.8
Msa1137240 MtrunA17_Chr6g0480671 38.367 245 136 4 228 462 516 755 4.46e-37 145
Msa1137240 MtrunA17_Chr6g0480671 39.231 130 76 2 108 237 192 318 1.19e-22 101
Msa1137240 MtrunA17_Chr6g0480851 35.019 257 150 5 228 472 505 756 4.74e-34 136
Msa1137240 MtrunA17_Chr6g0480851 40.945 127 72 2 109 235 184 307 9.53e-23 102
Msa1137240 MtrunA17_Chr6g0480781 33.333 243 145 5 232 462 494 731 1.15e-31 129
Msa1137240 MtrunA17_Chr6g0480781 32.787 183 102 4 71 235 113 292 1.43e-22 101
Msa1137240 MtrunA17_Chr5g0395421 34.667 225 130 5 228 440 136 355 1.30e-28 117
Msa1137240 MtrunA17_Chr6g0480771 32.520 246 146 6 228 461 16 253 4.66e-28 113
Msa1137240 MtrunA17_Chr6g0480741 30.120 249 157 5 228 464 433 676 3.49e-26 112
Msa1137240 MtrunA17_Chr6g0480741 30.645 124 83 2 108 231 114 234 1.44e-15 79.7
Msa1137240 MtrunA17_Chr6g0480681 30.798 263 161 7 228 478 461 714 2.94e-25 109
Msa1137240 MtrunA17_Chr6g0480681 31.667 120 78 2 109 228 115 230 2.37e-14 75.9
Msa1137240 MtrunA17_Chr6g0480841 33.503 197 112 5 278 461 2 192 1.33e-21 93.2
Msa1137240 MtrunA17_Chr2g0318551 37.857 140 77 4 106 243 59 190 3.31e-20 89.4
Msa1137240 MtrunA17_Chr6g0480791 30.556 180 103 5 71 231 116 292 3.50e-19 88.2
Msa1137240 MtrunA17_Chr6g0480751 31.333 150 98 3 94 241 83 229 2.17e-17 81.6
Msa1137240 MtrunA17_Chr5g0395411 35.433 127 66 3 109 235 172 282 1.28e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1137240 AT5G15410.2 79.137 278 50 2 228 497 448 725 8.40e-153 453
Msa1137240 AT5G15410.2 72.864 199 49 4 42 237 45 241 9.64e-84 274
Msa1137240 AT5G15410.1 79.137 278 50 2 228 497 449 726 1.35e-152 452
Msa1137240 AT5G15410.1 72.864 199 49 4 42 237 46 242 1.23e-83 273
Msa1137240 AT5G54250.2 56.522 276 108 2 228 493 414 687 2.20e-107 335
Msa1137240 AT5G54250.2 40.288 139 76 4 102 235 72 208 1.34e-20 95.9
Msa1137240 AT5G54250.1 56.522 276 108 2 228 493 414 687 2.20e-107 335
Msa1137240 AT5G54250.1 40.288 139 76 4 102 235 72 208 1.34e-20 95.9
Msa1137240 AT5G54250.4 56.522 276 108 2 228 493 414 687 2.20e-107 335
Msa1137240 AT5G54250.4 40.288 139 76 4 102 235 72 208 1.34e-20 95.9
Msa1137240 AT5G54250.3 55.072 276 107 3 228 493 414 682 1.22e-101 320
Msa1137240 AT5G54250.3 40.288 139 76 4 102 235 72 208 1.27e-20 95.9
Msa1137240 AT1G19780.2 41.772 237 135 2 228 462 215 450 2.13e-61 210
Msa1137240 AT1G15990.1 42.194 237 134 2 228 462 420 655 5.19e-61 213
Msa1137240 AT1G15990.1 38.462 130 74 2 108 233 89 216 4.84e-20 94.0
Msa1137240 AT2G23980.6 42.678 239 134 2 228 464 405 642 1.16e-60 212
Msa1137240 AT2G23980.6 34.078 179 104 5 108 275 75 250 2.90e-20 94.7
Msa1137240 AT2G23980.9 42.678 239 134 2 228 464 432 669 1.37e-60 212
Msa1137240 AT2G23980.9 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.10 42.678 239 134 2 228 464 432 669 1.37e-60 212
Msa1137240 AT2G23980.10 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.1 42.678 239 134 2 228 464 432 669 1.37e-60 212
Msa1137240 AT2G23980.1 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.4 42.678 239 134 2 228 464 432 669 1.37e-60 212
Msa1137240 AT2G23980.4 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.5 42.678 239 134 2 228 464 432 669 1.37e-60 212
Msa1137240 AT2G23980.5 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.3 42.678 239 134 2 228 464 455 692 2.04e-60 212
Msa1137240 AT2G23980.3 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.2 42.678 239 134 2 228 464 455 692 2.04e-60 212
Msa1137240 AT2G23980.2 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.8 42.678 239 134 2 228 464 455 692 2.04e-60 212
Msa1137240 AT2G23980.8 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT2G23980.7 42.678 239 134 2 228 464 455 692 2.04e-60 212
Msa1137240 AT2G23980.7 34.078 179 104 5 108 275 102 277 2.15e-20 95.1
Msa1137240 AT4G30560.5 41.841 239 136 2 228 464 405 642 2.78e-60 211
Msa1137240 AT4G30560.5 33.520 179 105 5 108 275 76 251 3.01e-20 94.7
Msa1137240 AT4G30560.2 41.841 239 136 2 228 464 405 642 2.78e-60 211
Msa1137240 AT4G30560.2 33.520 179 105 5 108 275 76 251 3.01e-20 94.7
Msa1137240 AT4G30560.3 41.841 239 136 2 228 464 405 642 2.78e-60 211
Msa1137240 AT4G30560.3 33.520 179 105 5 108 275 76 251 3.01e-20 94.7
Msa1137240 AT1G19780.1 41.772 237 135 2 228 462 426 661 3.00e-60 211
Msa1137240 AT1G19780.1 38.462 130 73 3 108 233 96 222 1.10e-18 90.1
Msa1137240 AT4G30560.1 41.841 239 136 2 228 464 431 668 3.87e-60 211
Msa1137240 AT4G30560.1 33.520 179 105 5 108 275 102 277 2.82e-20 94.7
Msa1137240 AT4G30560.4 41.841 239 136 2 228 464 431 668 3.87e-60 211
Msa1137240 AT4G30560.4 33.520 179 105 5 108 275 102 277 2.82e-20 94.7
Msa1137240 AT4G30360.1 43.038 237 132 2 228 462 399 634 5.22e-60 210
Msa1137240 AT4G30360.1 35.821 134 81 3 109 239 71 202 1.27e-16 83.6
Msa1137240 AT2G24610.1 42.616 237 133 2 228 462 399 634 5.55e-60 210
Msa1137240 AT2G24610.1 38.150 173 98 5 59 229 26 191 7.12e-20 93.6
Msa1137240 AT2G24610.2 42.616 237 133 2 228 462 414 649 1.13e-59 209
Msa1137240 AT2G24610.2 38.150 173 98 5 59 229 41 206 1.01e-19 93.2
Msa1137240 AT5G57940.3 42.259 239 135 2 228 464 409 646 4.32e-59 207
Msa1137240 AT5G57940.3 31.285 179 109 5 108 275 80 255 3.06e-15 79.0
Msa1137240 AT5G57940.1 42.259 239 135 2 228 464 416 653 4.34e-59 207
Msa1137240 AT5G57940.1 31.285 179 109 5 108 275 87 262 2.68e-15 79.3
Msa1137240 AT5G57940.2 42.259 239 135 2 228 464 416 653 4.34e-59 207
Msa1137240 AT5G57940.2 31.285 179 109 5 108 275 87 262 2.68e-15 79.3
Msa1137240 AT5G53130.1 41.453 234 134 2 228 459 404 636 1.06e-57 204
Msa1137240 AT5G53130.1 31.282 195 128 4 47 239 21 211 1.47e-19 92.4
Msa1137240 AT1G01340.2 41.350 237 136 2 228 462 391 626 4.32e-57 202
Msa1137240 AT1G01340.2 41.406 128 72 2 108 235 67 191 3.05e-21 97.8
Msa1137240 AT1G01340.1 41.350 237 136 2 228 462 386 621 4.66e-57 202
Msa1137240 AT1G01340.1 41.406 128 72 2 108 235 62 186 2.92e-21 97.8
Msa1137240 AT4G01010.1 37.410 278 157 4 228 489 392 668 6.23e-57 201
Msa1137240 AT4G01010.1 39.850 133 77 2 108 240 67 196 7.37e-20 93.6
Msa1137240 AT4G01010.2 37.410 278 157 4 228 489 392 668 6.23e-57 201
Msa1137240 AT4G01010.2 39.850 133 77 2 108 240 67 196 7.37e-20 93.6
Msa1137240 AT3G48010.1 41.350 237 136 2 228 462 375 610 1.36e-55 197
Msa1137240 AT3G48010.1 37.500 128 77 2 108 235 43 167 2.93e-16 82.4
Msa1137240 AT2G28260.2 42.017 238 133 4 228 462 349 584 1.41e-55 196
Msa1137240 AT2G28260.2 34.416 154 91 3 92 239 5 154 2.26e-17 85.5
Msa1137240 AT2G28260.1 42.017 238 133 4 228 462 389 624 2.18e-55 197
Msa1137240 AT2G28260.1 34.416 154 91 3 92 239 45 194 2.66e-17 85.5
Msa1137240 AT5G14870.1 37.200 250 154 2 228 475 367 615 4.12e-53 191
Msa1137240 AT5G14870.1 42.188 128 70 2 108 235 39 162 3.26e-22 100
Msa1137240 AT2G46430.1 38.819 237 140 4 228 462 395 628 6.69e-49 179
Msa1137240 AT2G46430.1 35.338 133 83 2 108 240 71 200 7.14e-16 80.9
Msa1137240 AT2G46430.2 38.819 237 140 4 228 462 395 628 6.69e-49 179
Msa1137240 AT2G46430.2 35.338 133 83 2 108 240 71 200 7.14e-16 80.9
Msa1137240 AT2G46450.3 33.213 277 165 7 222 489 311 576 1.37e-39 152
Msa1137240 AT2G46450.2 33.213 277 165 7 222 489 324 589 1.80e-39 151
Msa1137240 AT2G46450.4 33.213 277 165 7 222 489 347 612 2.14e-39 151
Msa1137240 AT2G46450.1 33.213 277 165 7 222 489 347 612 2.14e-39 151
Msa1137240 AT3G17700.1 37.302 252 143 5 228 469 512 758 7.61e-36 142
Msa1137240 AT3G17700.1 35.252 139 83 3 93 231 180 311 2.42e-21 98.2
Msa1137240 AT3G17690.1 36.777 242 137 6 230 462 481 715 1.37e-35 141
Msa1137240 AT3G17690.1 38.129 139 79 3 93 231 146 277 4.67e-21 97.4
Msa1137240 AT2G46440.2 34.979 243 153 4 222 462 169 408 1.01e-33 132
Msa1137240 AT2G46440.1 34.979 243 153 4 222 462 347 586 1.07e-32 132
Msa1137240 AT3G17700.2 40.000 165 94 3 228 392 512 671 2.23e-27 116
Msa1137240 AT3G17700.2 35.252 139 83 3 93 231 180 311 2.05e-21 98.2
Msa1137240 AT3G17690.2 39.873 158 88 3 230 386 481 632 1.89e-26 113
Msa1137240 AT3G17690.2 38.129 139 79 3 93 231 146 277 4.77e-21 97.1
Msa1137240 AT3G17690.3 38.129 139 79 3 93 231 146 277 5.05e-21 96.7

Find 166 sgRNAs with CRISPR-Local

Find 399 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGCTTGGACCTCATTAAAA+AGG 0.257699 7_4:-5962648 Msa1137240:intron
AAAGAGAGAAATAGTGATTC+AGG 0.258928 7_4:-5961441 Msa1137240:three_prime_UTR
TTGCCTAAAACTCCCCAATT+TGG 0.262276 7_4:+5965729 None:intergenic
GCCGAACTCTTTGTCTTAAT+CGG 0.269123 7_4:+5962771 None:intergenic
CACTCCACCATGCTGATTAC+TGG 0.271370 7_4:+5965900 None:intergenic
GGTACATAACCGATCATTTC+CGG 0.275557 7_4:-5961996 Msa1137240:CDS
GCTGGAAGCCGGTCGATAAA+AGG 0.276163 7_4:+5962084 None:intergenic
AATTGCACGCGCTTGCTTCT+TGG 0.279881 7_4:+5965696 None:intergenic
AAGTACAAGGCAGCCTTAAA+AGG 0.285103 7_4:+5961364 None:intergenic
GTGCCTCCATTATCCCTTAC+AGG 0.286550 7_4:+5961844 None:intergenic
TAGAGTGGATGGTAGTGTTT+TGG 0.292648 7_4:+5966866 None:intergenic
GAGCAGTATCAAAGCCAAAT+TGG 0.306208 7_4:-5965743 Msa1137240:CDS
GTGGATTGGTGGAAAATTCT+TGG 0.308729 7_4:-5966003 Msa1137240:CDS
TAGGCGACGAACTACTTTCT+TGG 0.337638 7_4:-5962119 Msa1137240:CDS
CCGGCGGACGCTTCCCATTC+GGG 0.347149 7_4:+5965810 None:intergenic
CTGCAATGTTCATGTCAATT+AGG 0.348025 7_4:-5961798 Msa1137240:CDS
CAATGCCTTTGCTTAGACTT+TGG 0.354479 7_4:+5962175 None:intergenic
CGGTGCATTTGTTTCATGTT+TGG 0.361294 7_4:-5965518 Msa1137240:CDS
CCGCAAAATGCAGAAATATA+TGG 0.362644 7_4:+5961676 None:intergenic
GTGACTCCTGTAAGGGATAA+TGG 0.371039 7_4:-5961850 Msa1137240:CDS
AGCAGTATCAAAGCCAAATT+GGG 0.374364 7_4:-5965742 Msa1137240:CDS
TGAAAGAGAGAGTGAGTGAG+AGG 0.378125 7_4:+5966684 None:intergenic
GTCTTGATGCTCAAAACTTA+AGG 0.386358 7_4:-5962017 Msa1137240:CDS
AACTTGCTTATAGACGTTAC+AGG 0.387453 7_4:-5961891 Msa1137240:CDS
CGAGATACTACTCGTCGAAT+TGG 0.400059 7_4:-5961939 Msa1137240:CDS
TGTTATTCTTCCTGTTCCTC+AGG 0.400526 7_4:-5965367 Msa1137240:intron
TTGGTGAAGTGAATTGAAAC+TGG 0.402357 7_4:+5966833 None:intergenic
GGTACCATTGTTTCACAACT+TGG 0.414666 7_4:-5962450 Msa1137240:CDS
CATTTCATCTTCTCCTCCCA+TGG 0.417470 7_4:+5962724 None:intergenic
CATCAAGCGCCACCTTTGCT+TGG 0.417719 7_4:-5962663 Msa1137240:CDS
AGGGTCGCCGTGTTTGTATA+TGG 0.421162 7_4:-5965589 Msa1137240:CDS
GAGAGAGAGTATTGTGTTGT+GGG 0.422747 7_4:+5966892 None:intergenic
GCAGAAATATATGGCCGATA+TGG 0.425640 7_4:+5961685 None:intergenic
AGAGAGTGAGTGAGAGGGTA+GGG 0.426885 7_4:+5966690 None:intergenic
AAGACTTACCTGAGGGTTTG+AGG 0.427919 7_4:-5962691 Msa1137240:CDS
TGGTTTAGCGGCGGTTGTTA+CGG 0.428496 7_4:-5965562 Msa1137240:CDS
GTGACAACTGTCTGCACAGC+TGG 0.429618 7_4:+5965836 None:intergenic
CTCGAACCAGGAGGTTTCTT+AGG 0.431143 7_4:-5962138 Msa1137240:CDS
ACAAATGTGGCTGAGGAAGC+TGG 0.432884 7_4:+5962066 None:intergenic
AAATTTCTAACCTGAGGAAC+AGG 0.441776 7_4:+5965357 None:intergenic
AAAATAAATAAAACCAATCA+TGG 0.445625 7_4:+5961586 None:intergenic
CCGAACTCTTTGTCTTAATC+GGG 0.446653 7_4:+5962772 None:intergenic
ACGGCAGAGATGGGCGGCCA+TGG 0.448118 7_4:-5962741 Msa1137240:CDS
GATAAACTTGTGTCCATGAT+TGG 0.450306 7_4:-5961599 Msa1137240:three_prime_UTR
ACTTATTGAATAAATAATGA+AGG 0.451409 7_4:-5961345 Msa1137240:three_prime_UTR
TTTGATTCATCACTCTCTCA+TGG 0.451748 7_4:-5966643 Msa1137240:five_prime_UTR
GAATCGCTTGTTGTTGGATG+TGG 0.452041 7_4:-5965465 Msa1137240:CDS
CGGCAGAGATGGGCGGCCAT+GGG 0.452732 7_4:-5962740 Msa1137240:CDS
GAGGTCCGGTGACTCCTGTA+AGG 0.454750 7_4:-5961858 Msa1137240:CDS
TGGATTGGTGGAAAATTCTT+GGG 0.458229 7_4:-5966002 Msa1137240:CDS
TTCTTGACAACATCTGTGAC+AGG 0.460022 7_4:-5962418 Msa1137240:CDS
CTTGAATCAACTGAAGCATT+CGG 0.467071 7_4:-5962039 Msa1137240:CDS
GAGAGAGGAGAAGGTGGGCA+TGG 0.467830 7_4:+5966600 None:intergenic
TCATCTCGAGAGAAGACTAA+AGG 0.472290 7_4:+5962389 None:intergenic
TATCACAATTTCGACCATAT+CGG 0.473506 7_4:-5961699 Msa1137240:three_prime_UTR
GATTGGAACTAGATAGGAAC+CGG 0.475356 7_4:+5965791 None:intergenic
AGTCTTCTCTCGAGATGAAA+AGG 0.477345 7_4:-5962384 Msa1137240:intron
TAACAATTTCAAAGGTCTGA+AGG 0.477905 7_4:+5961501 None:intergenic
GTTAGCGCGTGGTGTTGCTT+TGG 0.481997 7_4:-5965655 Msa1137240:CDS
CTTATAGACGTTACAGGCAG+AGG 0.484790 7_4:-5961885 Msa1137240:CDS
AATATAAATGTATAAGATGA+TGG 0.484989 7_4:+5966773 None:intergenic
CGAACAATGAACACCATCCT+TGG 0.487181 7_4:+5962216 None:intergenic
CATGGGAGGAGAAGATGAAA+TGG 0.491871 7_4:-5962723 Msa1137240:CDS
GGTTGTTACGGTGGCGCGTA+CGG 0.497452 7_4:-5965550 Msa1137240:CDS
GAGAGAGTGAGTGAGAGGGT+AGG 0.499483 7_4:+5966689 None:intergenic
CCCGATTAAGACAAAGAGTT+CGG 0.500972 7_4:-5962772 Msa1137240:CDS
AACAATTTCAAAGGTCTGAA+GGG 0.501465 7_4:+5961502 None:intergenic
TCGAGAGAATCGCTTGTTGT+TGG 0.506065 7_4:-5965471 Msa1137240:CDS
CTGGAAGCCGGTCGATAAAA+GGG 0.506947 7_4:+5962085 None:intergenic
CGCTTTCAATAGGGAGAGAA+GGG 0.507410 7_4:-5965608 Msa1137240:CDS
CGCTAACAACAACGCGCGGT+TGG 0.512602 7_4:+5965671 None:intergenic
GTACCTAGGGAGAGAGGAGA+AGG 0.515734 7_4:+5966591 None:intergenic
CAGTTGTCACCAACCCGAAT+GGG 0.516483 7_4:-5965823 Msa1137240:CDS
CAGAGATGGGCGGCCATGGG+AGG 0.516912 7_4:-5962737 Msa1137240:CDS
ACTCCACCATGCTGATTACT+GGG 0.517503 7_4:+5965901 None:intergenic
GTATATGGATGGTGGTTTAG+CGG 0.518430 7_4:-5965574 Msa1137240:CDS
CCACCTTCTCCTCTCTCCCT+AGG 0.520444 7_4:-5966594 Msa1137240:intron
TGGAATGGTGGATGAGGAGG+AGG 0.523089 7_4:-5962805 Msa1137240:CDS
TCTCATTTGCAAATTTGTAC+CGG 0.523525 7_4:+5961977 None:intergenic
AGAGAGAGAGTATTGTGTTG+TGG 0.523820 7_4:+5966891 None:intergenic
CCTAGGGAGAGAGGAGAAGG+TGG 0.528999 7_4:+5966594 None:intergenic
CTAAGAAACCTCCTGGTTCG+AGG 0.530685 7_4:+5962139 None:intergenic
TGGCTGAGGAAGCTGGAAGC+CGG 0.537558 7_4:+5962073 None:intergenic
TTAAATTGCAATTGTGGTCG+CGG 0.538224 7_4:+5961630 None:intergenic
GAGCACATGGTTGTAAGTGT+TGG 0.541271 7_4:+5966731 None:intergenic
AGAGAGAGTATTGTGTTGTG+GGG 0.542337 7_4:+5966893 None:intergenic
TCGTCGCCTAAGAAACCTCC+TGG 0.544040 7_4:+5962132 None:intergenic
GGTCGATAAAAGGGCGTCGA+AGG 0.546041 7_4:+5962094 None:intergenic
GCAACTAGTGTCCTCGAACC+AGG 0.546742 7_4:-5962150 Msa1137240:CDS
ATGTCTCTCCTCAAACCCTC+AGG 0.547362 7_4:+5962683 None:intergenic
ATGAGAGAGTGATGAATCAA+AGG 0.547934 7_4:+5966645 None:intergenic
CGCGCGTTGTTGTTAGCGCG+TGG 0.548152 7_4:-5965666 Msa1137240:CDS
AGGATGGTGTTCATTGTTCG+CGG 0.551595 7_4:-5962213 Msa1137240:CDS
GCGCTTTCAATAGGGAGAGA+AGG 0.552923 7_4:-5965609 Msa1137240:CDS
ACTCGTCGAATTGGAGAACA+TGG 0.552999 7_4:-5961930 Msa1137240:CDS
CGGACGCTTCCCATTCGGGT+TGG 0.553468 7_4:+5965814 None:intergenic
AATGAACACCATCCTTGGTA+CGG 0.553769 7_4:+5962221 None:intergenic
CAGCTGGTGGAGTGGAACAC+TGG 0.556792 7_4:+5965852 None:intergenic
AAGACAAACAAATGTGGCTG+AGG 0.557236 7_4:+5962059 None:intergenic
GAAAGAGAGAGTGAGTGAGA+GGG 0.558022 7_4:+5966685 None:intergenic
TCTTTGCCATGACTGCATGT+AGG 0.558556 7_4:+5962858 None:intergenic
CAGGCAGAGGACTAGAGGTC+CGG 0.559424 7_4:-5961872 Msa1137240:CDS
CTGCTGAGACGGCAACTCCA+GGG 0.563137 7_4:+5965931 None:intergenic
AGGAGATCCCGTACCAAGGA+TGG 0.563141 7_4:-5962229 Msa1137240:CDS
TGGGTTGTCGTCTGCTGAGA+CGG 0.563719 7_4:+5965920 None:intergenic
TTATTTATTCAATAAGTACA+AGG 0.565084 7_4:+5961351 None:intergenic
GTTCCAATCCAAAACCGTCC+CGG 0.565425 7_4:-5965777 Msa1137240:CDS
ACATGGAATGGTGGATGAGG+AGG 0.567101 7_4:-5962808 Msa1137240:CDS
ATGAACACCATCCTTGGTAC+GGG 0.567853 7_4:+5962222 None:intergenic
ACTGGTTACGCAACGTAGAG+TGG 0.568861 7_4:+5966851 None:intergenic
ACAGTTGTCACCAACCCGAA+TGG 0.580011 7_4:-5965824 Msa1137240:CDS
GGTATTCCTACATGCAGTCA+TGG 0.581719 7_4:-5962864 Msa1137240:CDS
ACGTTGTTGATTGTGTTGCT+AGG 0.583661 7_4:+5965972 None:intergenic
GCAGCTGAGATGTCGAGACA+TGG 0.585933 7_4:-5962825 Msa1137240:CDS
CATTATATGAGATCTTTCAA+AGG 0.586227 7_4:-5965408 Msa1137240:CDS
CGTTACAGGCAGAGGACTAG+AGG 0.586315 7_4:-5961877 Msa1137240:CDS
TTGGTGGAAAATTCTTGGGA+AGG 0.587898 7_4:-5965998 Msa1137240:CDS
TCTCATATAATGAGAAGCAA+TGG 0.588285 7_4:+5965419 None:intergenic
ACAACTGTCTGCACAGCTGG+TGG 0.588412 7_4:+5965839 None:intergenic
CCGTGTTTGTATATGGATGG+TGG 0.588479 7_4:-5965582 Msa1137240:CDS
GGTACAAATTTGCAAATGAG+AGG 0.592078 7_4:-5961975 Msa1137240:CDS
CTTATTGAATAAATAATGAA+GGG 0.592287 7_4:-5961344 Msa1137240:three_prime_UTR
TGTTACGGTGGCGCGTACGG+TGG 0.595042 7_4:-5965547 Msa1137240:CDS
AAATTTGTACCGGAAATGAT+CGG 0.599973 7_4:+5961987 None:intergenic
TCATCCAAGTTGTGAAACAA+TGG 0.606915 7_4:+5962446 None:intergenic
TCGCCGTGTTTGTATATGGA+TGG 0.612064 7_4:-5965585 Msa1137240:CDS
TTATCCCTTACAGGAGTCAC+CGG 0.615827 7_4:+5961853 None:intergenic
TGTCTGCACAGCTGGTGGAG+TGG 0.617877 7_4:+5965844 None:intergenic
GTGGAACAGATAATTAGAGA+AGG 0.618013 7_4:-5962249 Msa1137240:intron
TAATGAGGTCCAAGCAAAGG+TGG 0.618800 7_4:+5962654 None:intergenic
TTGGATGTGGGAAACTCGTG+TGG 0.619126 7_4:-5965452 Msa1137240:CDS
TTTAGCGGCGGTTGTTACGG+TGG 0.620430 7_4:-5965559 Msa1137240:CDS
TATCATTCAAGATGATCATG+TGG 0.620994 7_4:+5961775 None:intergenic
GGCGCGTACGGTGGTTGATG+CGG 0.621889 7_4:-5965538 Msa1137240:CDS
CGAAACCAAAGTCTAAGCAA+AGG 0.623581 7_4:-5962180 Msa1137240:CDS
AAATGAGAGGCTAAAGAGAA+CGG 0.624073 7_4:-5961962 Msa1137240:CDS
ATAATGGAGGCACTGAGCGT+AGG 0.626496 7_4:-5961834 Msa1137240:CDS
AATCGCTTGTTGTTGGATGT+GGG 0.629974 7_4:-5965464 Msa1137240:CDS
TGGATGGTACCTAGGGAGAG+AGG 0.630893 7_4:+5966585 None:intergenic
AGGTCCGGTGACTCCTGTAA+GGG 0.632405 7_4:-5961857 Msa1137240:CDS
CCACCATCCATATACAAACA+CGG 0.632835 7_4:+5965582 None:intergenic
GAGACATGGAATGGTGGATG+AGG 0.635573 7_4:-5962811 Msa1137240:CDS
CTGATCAAAGACTTACCTGA+GGG 0.638121 7_4:-5962698 Msa1137240:CDS
GTTACGCAACGTAGAGTGGA+TGG 0.639936 7_4:+5966855 None:intergenic
ACTCTTTGTCTTAATCGGGA+CGG 0.645228 7_4:+5962776 None:intergenic
CTAGGGAGAGAGGAGAAGGT+GGG 0.651532 7_4:+5966595 None:intergenic
TGTTATGCATGCACACAAGT+TGG 0.653305 7_4:-5965879 Msa1137240:CDS
TGAGATGTCGAGACATGGAA+TGG 0.654353 7_4:-5962820 Msa1137240:CDS
ATGGACACAAGTTTATCACA+TGG 0.655848 7_4:+5961605 None:intergenic
AGCAACACAATCAACAACGT+TGG 0.660753 7_4:-5965969 Msa1137240:CDS
GAGAAGGAGATCCCGTACCA+AGG 0.671658 7_4:-5962233 Msa1137240:CDS
TCTTGACAACATCTGTGACA+GGG 0.672297 7_4:-5962417 Msa1137240:CDS
TGATTCAAGACAAACAAATG+TGG 0.678063 7_4:+5962053 None:intergenic
TATGGATGGTGGTTTAGCGG+CGG 0.688411 7_4:-5965571 Msa1137240:CDS
GTGTGACAGTGAAGAGCACA+TGG 0.688980 7_4:+5966718 None:intergenic
CGACAACCCAGTAATCAGCA+TGG 0.695371 7_4:-5965907 Msa1137240:CDS
GCAGTATCAAAGCCAAATTG+GGG 0.708168 7_4:-5965741 Msa1137240:CDS
ACTGATCAAAGACTTACCTG+AGG 0.709178 7_4:-5962699 Msa1137240:CDS
CTCGTCGAATTGGAGAACAT+GGG 0.715220 7_4:-5961929 Msa1137240:CDS
GGTGACAGCAGTGATGACCC+TGG 0.715870 7_4:-5965948 Msa1137240:CDS
CAACCCAGTAATCAGCATGG+TGG 0.718534 7_4:-5965904 Msa1137240:CDS
GATGTCGAGACATGGAATGG+TGG 0.724616 7_4:-5962817 Msa1137240:CDS
TGGATGTGGGAAACTCGTGT+GGG 0.728221 7_4:-5965451 Msa1137240:CDS
TGGAACTAGATAGGAACCGG+CGG 0.730012 7_4:+5965794 None:intergenic
ACTCCTGTAAGGGATAATGG+AGG 0.737690 7_4:-5961847 Msa1137240:CDS
ACTAGTGTCCTCGAACCAGG+AGG 0.746623 7_4:-5962147 Msa1137240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTATTTTTATTTATT+TGG - chr7_4:5966573-5966592 Msa1137240:intron 0.0%
!! TATTTAATCTAAATTTAGAT+TGG - chr7_4:5961694-5961713 Msa1137240:three_prime_UTR 10.0%
!! AGTTAAAAAAAATAGAATAA+TGG + chr7_4:5962818-5962837 None:intergenic 10.0%
!!! TCAATTATTATAATATTTTG+TGG - chr7_4:5962837-5962856 Msa1137240:CDS 10.0%
!!! CAATTATTATAATATTTTGT+GGG - chr7_4:5962838-5962857 Msa1137240:CDS 10.0%
!! TGTTAGATTAAAAATAATTA+AGG - chr7_4:5965600-5965619 Msa1137240:CDS 10.0%
!! GTTAGATTAAAAATAATTAA+GGG - chr7_4:5965601-5965620 Msa1137240:CDS 10.0%
!!! TATTTTTGTTTTTAATAGAA+AGG + chr7_4:5966871-5966890 None:intergenic 10.0%
!! TTTCTATTAAAAACAAAAAT+AGG - chr7_4:5966870-5966889 Msa1137240:five_prime_UTR 10.0%
!! TTCTATTAAAAACAAAAATA+GGG - chr7_4:5966871-5966890 Msa1137240:five_prime_UTR 10.0%
!! AATATAAATGTATAAGATGA+TGG + chr7_4:5961378-5961397 None:intergenic 15.0%
!!! ATGAGTAAAAAAGTTTTATA+CGG - chr7_4:5962990-5963009 Msa1137240:intron 15.0%
!!! TTTGGTAATAGTTAAAAAAA+GGG + chr7_4:5964023-5964042 None:intergenic 15.0%
!!! ATTTGGTAATAGTTAAAAAA+AGG + chr7_4:5964024-5964043 None:intergenic 15.0%
!!! TATGTTACTTAATGATAATT+TGG + chr7_4:5964041-5964060 None:intergenic 15.0%
!! ATGTGAAATAGAATATTATT+TGG + chr7_4:5964741-5964760 None:intergenic 15.0%
!! TATTTGTAATAATATTGGAT+TGG + chr7_4:5965174-5965193 None:intergenic 15.0%
!!! TATTTTTAATCTAACAACTT+AGG + chr7_4:5965596-5965615 None:intergenic 15.0%
!! AAAATAAATAAAACCAATCA+TGG + chr7_4:5966565-5966584 None:intergenic 15.0%
!!! TTATTTGGTTTTTTATTTTG+AGG - chr7_4:5966588-5966607 Msa1137240:intron 15.0%
!!! TTTTCACATAAAATTTATTG+AGG + chr7_4:5966622-5966641 None:intergenic 15.0%
!!! TTTTCAAATAACAATTTCAA+AGG + chr7_4:5966658-5966677 None:intergenic 15.0%
!! TTATTTATTCAATAAGTACA+AGG + chr7_4:5966800-5966819 None:intergenic 15.0%
!! ACTTATTGAATAAATAATGA+AGG - chr7_4:5966803-5966822 Msa1137240:five_prime_UTR 15.0%
!! CTTATTGAATAAATAATGAA+GGG - chr7_4:5966804-5966823 Msa1137240:five_prime_UTR 15.0%
!! ACTAAATATGTTAATTAACG+AGG - chr7_4:5961798-5961817 Msa1137240:CDS 20.0%
!! CTAAATATGTTAATTAACGA+GGG - chr7_4:5961799-5961818 Msa1137240:CDS 20.0%
!!! CATGATATGTAGATATTTTA+AGG + chr7_4:5962956-5962975 None:intergenic 20.0%
!! ATACATAAAGATTCATTTCT+AGG - chr7_4:5963016-5963035 Msa1137240:intron 20.0%
!!! GATATAAACATATTTTACGT+TGG - chr7_4:5963069-5963088 Msa1137240:intron 20.0%
!! GTAAAATATCTTTACATTGT+CGG + chr7_4:5963120-5963139 None:intergenic 20.0%
!!! ATGTTTTTGTTTTTACTACT+TGG - chr7_4:5963422-5963441 Msa1137240:intron 20.0%
!! TAACAAGAACAAACATATAA+AGG + chr7_4:5963507-5963526 None:intergenic 20.0%
!!! ATAAACACTTCTAAGATAAA+AGG - chr7_4:5964073-5964092 Msa1137240:intron 20.0%
!! TTAATTATATCTTGAACTGT+TGG - chr7_4:5964613-5964632 Msa1137240:intron 20.0%
!! TAATTATATCTTGAACTGTT+GGG - chr7_4:5964614-5964633 Msa1137240:intron 20.0%
!!! TTAAACTTCAGAAAGATTTT+AGG + chr7_4:5964674-5964693 None:intergenic 20.0%
!! ATAGATGTTAACTAAATCAA+GGG + chr7_4:5964770-5964789 None:intergenic 20.0%
!! AATCCAATAATAATCTACTT+CGG + chr7_4:5964939-5964958 None:intergenic 20.0%
!! AAGTAGATTATTATTGGATT+TGG - chr7_4:5964939-5964958 Msa1137240:intron 20.0%
!!! TATTTCTAACCTTTTTAATG+AGG + chr7_4:5965512-5965531 None:intergenic 20.0%
!!! ATTTGAACAATTTCCTTTTA+AGG - chr7_4:5966771-5966790 Msa1137240:five_prime_UTR 20.0%
!!! TTTGATTTTGCATGTGAATT+TGG + chr7_4:5961337-5961356 None:intergenic 25.0%
! ATGATATTGAAGGATGAAAT+TGG + chr7_4:5961597-5961616 None:intergenic 25.0%
! CAATTGAAAGATGATATTGA+AGG + chr7_4:5961607-5961626 None:intergenic 25.0%
! AAATTAAAATGTACTCTCTC+TGG - chr7_4:5961647-5961666 Msa1137240:three_prime_UTR 25.0%
!! TACTTGTATTTAAGATCAGA+TGG - chr7_4:5961732-5961751 Msa1137240:intron 25.0%
!! TTGGTGGATAAATAACTTAA+GGG + chr7_4:5961933-5961952 None:intergenic 25.0%
!! ATTGGTGGATAAATAACTTA+AGG + chr7_4:5961934-5961953 None:intergenic 25.0%
! AATGGTTGAAATTACATAGA+TGG + chr7_4:5961978-5961997 None:intergenic 25.0%
! CATTATATGAGATCTTTCAA+AGG - chr7_4:5962740-5962759 Msa1137240:CDS 25.0%
! AATCATGTGTCTGAATTTAA+AGG + chr7_4:5963201-5963220 None:intergenic 25.0%
! GTGAACCAAAAATATATTAG+TGG + chr7_4:5963332-5963351 None:intergenic 25.0%
! ATATACTATGGTAAACCTTA+GGG + chr7_4:5963672-5963691 None:intergenic 25.0%
! TTCTCATCATAGATATACTA+TGG + chr7_4:5963684-5963703 None:intergenic 25.0%
! AAGGTTATGCTATAACTTAT+AGG - chr7_4:5964092-5964111 Msa1137240:intron 25.0%
!!! AGATTCTTTATCCCATTTTT+TGG - chr7_4:5964388-5964407 Msa1137240:intron 25.0%
!!! GATTCTTTATCCCATTTTTT+GGG - chr7_4:5964389-5964408 Msa1137240:intron 25.0%
!!! ATTCTTTATCCCATTTTTTG+GGG - chr7_4:5964390-5964409 Msa1137240:intron 25.0%
! TAAAATGTAATTCTGGTAAC+TGG - chr7_4:5964642-5964661 Msa1137240:intron 25.0%
! CATAGATGTTAACTAAATCA+AGG + chr7_4:5964771-5964790 None:intergenic 25.0%
!!! TTACTTTTCACTTTGTTGAT+CGG - chr7_4:5964899-5964918 Msa1137240:intron 25.0%
! TATCCGAAGTAGATTATTAT+TGG - chr7_4:5964933-5964952 Msa1137240:intron 25.0%
!!! TTTTTCAAATGGAATGCTTT+CGG + chr7_4:5965829-5965848 None:intergenic 25.0%
!! AAAGCATTCCATTTGAAAAA+AGG - chr7_4:5965829-5965848 Msa1137240:CDS 25.0%
!!! TTTGAAGTCCTTTTTTCAAA+TGG + chr7_4:5965840-5965859 None:intergenic 25.0%
!!! ATGGTTTTAAATTGCAATTG+TGG + chr7_4:5966527-5966546 None:intergenic 25.0%
! CTCATAAAAAATGAATGAAC+AGG + chr7_4:5966745-5966764 None:intergenic 25.0%
TTGATCCAATGGTGTATAAT+TGG + chr7_4:5961952-5961971 None:intergenic 30.0%
ATAGATGGAATTTGATCCAA+TGG + chr7_4:5961963-5961982 None:intergenic 30.0%
! AACCATTTTCTACTTCTCAA+AGG - chr7_4:5961991-5962010 Msa1137240:CDS 30.0%
! ACCATTTTCTACTTCTCAAA+GGG - chr7_4:5961992-5962011 Msa1137240:CDS 30.0%
!! CTGATGTATGTTTTTGTTAC+AGG - chr7_4:5962123-5962142 Msa1137240:CDS 30.0%
!! ATGTATGTTTTTGTTACAGG+TGG - chr7_4:5962126-5962145 Msa1137240:CDS 30.0%
TCTCATATAATGAGAAGCAA+TGG + chr7_4:5962732-5962751 None:intergenic 30.0%
! TGAGATCTTTCAAAGGTTTT+TGG - chr7_4:5962747-5962766 Msa1137240:CDS 30.0%
AATGGAAAATTTCTAACCTG+AGG + chr7_4:5962800-5962819 None:intergenic 30.0%
! ATGTTTGAGATTGTTTGATG+TGG - chr7_4:5963305-5963324 Msa1137240:intron 30.0%
! GTGGTCCACTAATATATTTT+TGG - chr7_4:5963324-5963343 Msa1137240:intron 30.0%
! ATTGAAGAATTTTCCAACAC+CGG + chr7_4:5963366-5963385 None:intergenic 30.0%
!!! ACTGATTTTGTTTTGTTTGC+AGG - chr7_4:5963552-5963571 Msa1137240:intron 30.0%
! CTCTCTTCTCTTATCAATTT+TGG + chr7_4:5963598-5963617 None:intergenic 30.0%
GATATACTATGGTAAACCTT+AGG + chr7_4:5963673-5963692 None:intergenic 30.0%
!!! CTAAAATTTTTGAAGTTGCG+AGG + chr7_4:5963802-5963821 None:intergenic 30.0%
AGTCTCTTGTGTAAAAAACA+GGG - chr7_4:5963917-5963936 Msa1137240:intron 30.0%
TATAAGTCTTTGTTACCAGA+AGG - chr7_4:5964231-5964250 Msa1137240:intron 30.0%
TGGTAAATCCCATATTTGTA+CGG + chr7_4:5964327-5964346 None:intergenic 30.0%
ACAAATATGGGATTTACCAA+TGG - chr7_4:5964328-5964347 Msa1137240:intron 30.0%
CAAATATGGGATTTACCAAT+GGG - chr7_4:5964329-5964348 Msa1137240:intron 30.0%
AAATAAGCCAATTTACCTGA+GGG + chr7_4:5964424-5964443 None:intergenic 30.0%
AAACACTTGTCAAACTGTTT+GGG - chr7_4:5964476-5964495 Msa1137240:intron 30.0%
! AATAAGTTGGAAACAGCTTA+TGG + chr7_4:5964531-5964550 None:intergenic 30.0%
GAGAACTTATGGAAATAAGT+TGG + chr7_4:5964544-5964563 None:intergenic 30.0%
TTATTTCCATAAGTTCTCCA+GGG - chr7_4:5964546-5964565 Msa1137240:intron 30.0%
! GGAGTGTTAAAATGTAATTC+TGG - chr7_4:5964635-5964654 Msa1137240:intron 30.0%
CATCTTAATCTAACACATTG+AGG + chr7_4:5964715-5964734 None:intergenic 30.0%
CTAATCTTTGATGCAACAAT+TGG - chr7_4:5965095-5965114 Msa1137240:intron 30.0%
AACTGTTTCATACTCAAACA+TGG - chr7_4:5965232-5965251 Msa1137240:intron 30.0%
! GTCAAATTTGTTTCATTTGC+AGG + chr7_4:5965541-5965560 None:intergenic 30.0%
GAAATTTATCCATCTTCTTC+AGG + chr7_4:5965574-5965593 None:intergenic 30.0%
TGATTCAAGACAAACAAATG+TGG + chr7_4:5966098-5966117 None:intergenic 30.0%
AAATTTGTACCGGAAATGAT+CGG + chr7_4:5966164-5966183 None:intergenic 30.0%
TCTCATTTGCAAATTTGTAC+CGG + chr7_4:5966174-5966193 None:intergenic 30.0%
TATCATTCAAGATGATCATG+TGG + chr7_4:5966376-5966395 None:intergenic 30.0%
ATAAAGTTCTGTGAATGCAA+TGG - chr7_4:5966393-5966412 Msa1137240:intron 30.0%
TATCACAATTTCGACCATAT+CGG - chr7_4:5966449-5966468 Msa1137240:intron 30.0%
!! CCATATATTTCTGCATTTTG+CGG - chr7_4:5966472-5966491 Msa1137240:intron 30.0%
AACAATTTCAAAGGTCTGAA+GGG + chr7_4:5966649-5966668 None:intergenic 30.0%
TAACAATTTCAAAGGTCTGA+AGG + chr7_4:5966650-5966669 None:intergenic 30.0%
AAAGAGAGAAATAGTGATTC+AGG - chr7_4:5966707-5966726 Msa1137240:five_prime_UTR 30.0%
TTGGTGAAGTGAATTGAAAC+TGG + chr7_4:5961318-5961337 None:intergenic 35.0%
ATGAGAGAGTGATGAATCAA+AGG + chr7_4:5961506-5961525 None:intergenic 35.0%
TTTGATTCATCACTCTCTCA+TGG - chr7_4:5961505-5961524 Msa1137240:three_prime_UTR 35.0%
ATCCACCAATTATACACCAT+TGG - chr7_4:5961944-5961963 Msa1137240:CDS 35.0%
ATCCAATGGTGTATAATTGG+TGG + chr7_4:5961949-5961968 None:intergenic 35.0%
TACACTACTACAAGTCTACA+AGG + chr7_4:5962050-5962069 None:intergenic 35.0%
!! TGTTTTTGTTACAGGTGGAT+TGG - chr7_4:5962131-5962150 Msa1137240:CDS 35.0%
!! TGGATTGGTGGAAAATTCTT+GGG - chr7_4:5962146-5962165 Msa1137240:CDS 35.0%
!! GTTTTGGATTGGAACTAGAT+AGG + chr7_4:5962366-5962385 None:intergenic 35.0%
AGCAGTATCAAAGCCAAATT+GGG - chr7_4:5962406-5962425 Msa1137240:CDS 35.0%
! TTTTTCTACGCGCTTTCAAT+AGG - chr7_4:5962530-5962549 Msa1137240:intron 35.0%
! TTTTCTACGCGCTTTCAATA+GGG - chr7_4:5962531-5962550 Msa1137240:intron 35.0%
AAATTTCTAACCTGAGGAAC+AGG + chr7_4:5962794-5962813 None:intergenic 35.0%
! TTTGTTTGCAGGTTGTGTTT+TGG - chr7_4:5963563-5963582 Msa1137240:intron 35.0%
TTTGTTCCAATTTCTCCCTA+AGG - chr7_4:5963654-5963673 Msa1137240:intron 35.0%
AGAAGAATGCAAAAAGTCAC+AGG - chr7_4:5963700-5963719 Msa1137240:intron 35.0%
GTCACTATTACCAAGTTAGA+GGG - chr7_4:5963826-5963845 Msa1137240:intron 35.0%
TCACTATTACCAAGTTAGAG+GGG - chr7_4:5963827-5963846 Msa1137240:intron 35.0%
CAGTCTCTTGTGTAAAAAAC+AGG - chr7_4:5963916-5963935 Msa1137240:intron 35.0%
GTACAATACACCAAAATGGT+GGG - chr7_4:5963949-5963968 Msa1137240:intron 35.0%
TAGTTAAAAAAAGGGCAGCT+CGG + chr7_4:5964015-5964034 None:intergenic 35.0%
TGCTATAACTTATAGGTTGC+TGG - chr7_4:5964099-5964118 Msa1137240:intron 35.0%
TATAACTTATAGGTTGCTGG+AGG - chr7_4:5964102-5964121 Msa1137240:intron 35.0%
ATAACTTATAGGTTGCTGGA+GGG - chr7_4:5964103-5964122 Msa1137240:intron 35.0%
TATTGGATGCAATCTTTCTC+TGG - chr7_4:5964188-5964207 Msa1137240:intron 35.0%
CCTATGTGTTTAGATGTTGA+CGG - chr7_4:5964300-5964319 Msa1137240:intron 35.0%
ATAAAGAATCTTGACAGCCA+AGG + chr7_4:5964379-5964398 None:intergenic 35.0%
GTCATCAAACCCCAAAAAAT+GGG + chr7_4:5964402-5964421 None:intergenic 35.0%
CAAATAAGCCAATTTACCTG+AGG + chr7_4:5964425-5964444 None:intergenic 35.0%
GAAACACTTGTCAAACTGTT+TGG - chr7_4:5964475-5964494 Msa1137240:intron 35.0%
CTTATTTCCATAAGTTCTCC+AGG - chr7_4:5964545-5964564 Msa1137240:intron 35.0%
TGCAAGAATTAGTAGGGATT+AGG + chr7_4:5964799-5964818 None:intergenic 35.0%
! AAGTGCTGCAAGAATTAGTA+GGG + chr7_4:5964805-5964824 None:intergenic 35.0%
!! AAAGTGCTGCAAGAATTAGT+AGG + chr7_4:5964806-5964825 None:intergenic 35.0%
! ACTAATTCTTGCAGCACTTT+TGG - chr7_4:5964806-5964825 Msa1137240:intron 35.0%
AATAATCTACTTCGGATACC+TGG + chr7_4:5964931-5964950 None:intergenic 35.0%
ACTCAAACATGGTCTAACAA+TGG - chr7_4:5965243-5965262 Msa1137240:intron 35.0%
CTCAAACATGGTCTAACAAT+GGG - chr7_4:5965244-5965263 Msa1137240:intron 35.0%
!! TGGGACTATTTCTACTATGA+AGG - chr7_4:5965263-5965282 Msa1137240:intron 35.0%
! AAAGAGTTCGGCATTTTGAA+CGG - chr7_4:5965388-5965407 Msa1137240:CDS 35.0%
! TTTTAATGAGGTCCAAGCAA+AGG + chr7_4:5965500-5965519 None:intergenic 35.0%
TTGCTTGGACCTCATTAAAA+AGG - chr7_4:5965500-5965519 Msa1137240:CDS 35.0%
ATCTTCTTCAGGCAACTTTA+CGG + chr7_4:5965563-5965582 None:intergenic 35.0%
ACAAACAGACACTACTTATC+AGG + chr7_4:5965674-5965693 None:intergenic 35.0%
TCATCCAAGTTGTGAAACAA+TGG + chr7_4:5965705-5965724 None:intergenic 35.0%
CTCTTTGATATGTATCCTTG+TGG - chr7_4:5965880-5965899 Msa1137240:CDS 35.0%
CTCTAATTATCTGTTCCACA+AGG + chr7_4:5965898-5965917 None:intergenic 35.0%
GTGGAACAGATAATTAGAGA+AGG - chr7_4:5965899-5965918 Msa1137240:CDS 35.0%
! CTTGAATCAACTGAAGCATT+CGG - chr7_4:5966109-5966128 Msa1137240:intron 35.0%
GTCTTGATGCTCAAAACTTA+AGG - chr7_4:5966131-5966150 Msa1137240:intron 35.0%
GGTACAAATTTGCAAATGAG+AGG - chr7_4:5966173-5966192 Msa1137240:intron 35.0%
AAATGAGAGGCTAAAGAGAA+CGG - chr7_4:5966186-5966205 Msa1137240:intron 35.0%
! AACTTGCTTATAGACGTTAC+AGG - chr7_4:5966257-5966276 Msa1137240:intron 35.0%
CTGCAATGTTCATGTCAATT+AGG - chr7_4:5966350-5966369 Msa1137240:intron 35.0%
TGTGATATGTGATATTCCTG+TGG + chr7_4:5966436-5966455 None:intergenic 35.0%
CCGCAAAATGCAGAAATATA+TGG + chr7_4:5966475-5966494 None:intergenic 35.0%
TTAAATTGCAATTGTGGTCG+CGG + chr7_4:5966521-5966540 None:intergenic 35.0%
ATGGACACAAGTTTATCACA+TGG + chr7_4:5966546-5966565 None:intergenic 35.0%
GATAAACTTGTGTCCATGAT+TGG - chr7_4:5966549-5966568 Msa1137240:intron 35.0%
!! GAGAGAGAGTATTGTGTTGT+GGG + chr7_4:5961259-5961278 None:intergenic 40.0%
!! AGAGAGAGAGTATTGTGTTG+TGG + chr7_4:5961260-5961279 None:intergenic 40.0%
!! AGAGTGGATGGTAGTGTTTT+GGG + chr7_4:5961284-5961303 None:intergenic 40.0%
!! TAGAGTGGATGGTAGTGTTT+TGG + chr7_4:5961285-5961304 None:intergenic 40.0%
! GAAATTGGTAGAGTGATGGA+TGG + chr7_4:5961582-5961601 None:intergenic 40.0%
GGATGAAATTGGTAGAGTGA+TGG + chr7_4:5961586-5961605 None:intergenic 40.0%
! AAGATCAGATGGAGTACTAC+TGG - chr7_4:5961743-5961762 Msa1137240:intron 40.0%
! GCCCTTTGAGAAGTAGAAAA+TGG + chr7_4:5961996-5962015 None:intergenic 40.0%
!!! TTTTGTTACAGGTGGATTGG+TGG - chr7_4:5962134-5962153 Msa1137240:CDS 40.0%
!! GTGGATTGGTGGAAAATTCT+TGG - chr7_4:5962145-5962164 Msa1137240:CDS 40.0%
TTGGTGGAAAATTCTTGGGA+AGG - chr7_4:5962150-5962169 Msa1137240:CDS 40.0%
! ACGTTGTTGATTGTGTTGCT+AGG + chr7_4:5962179-5962198 None:intergenic 40.0%
AGCAACACAATCAACAACGT+TGG - chr7_4:5962179-5962198 Msa1137240:CDS 40.0%
TGTTATGCATGCACACAAGT+TGG - chr7_4:5962269-5962288 Msa1137240:intron 40.0%
GATTGGAACTAGATAGGAAC+CGG + chr7_4:5962360-5962379 None:intergenic 40.0%
! TACTGCTCTTGCGAATTTTC+CGG + chr7_4:5962393-5962412 None:intergenic 40.0%
GAGCAGTATCAAAGCCAAAT+TGG - chr7_4:5962405-5962424 Msa1137240:CDS 40.0%
GCAGTATCAAAGCCAAATTG+GGG - chr7_4:5962407-5962426 Msa1137240:CDS 40.0%
! AAGCCAAATTGGGGAGTTTT+AGG - chr7_4:5962416-5962435 Msa1137240:CDS 40.0%
TTGCCTAAAACTCCCCAATT+TGG + chr7_4:5962422-5962441 None:intergenic 40.0%
! GAAAGCGCGTAGAAAAACAA+CGG + chr7_4:5962527-5962546 None:intergenic 40.0%
CCACCATCCATATACAAACA+CGG + chr7_4:5962569-5962588 None:intergenic 40.0%
! GTATATGGATGGTGGTTTAG+CGG - chr7_4:5962574-5962593 Msa1137240:intron 40.0%
CGGTGCATTTGTTTCATGTT+TGG - chr7_4:5962630-5962649 Msa1137240:intron 40.0%
!! AATCGCTTGTTGTTGGATGT+GGG - chr7_4:5962684-5962703 Msa1137240:CDS 40.0%
TGTTATTCTTCCTGTTCCTC+AGG - chr7_4:5962781-5962800 Msa1137240:CDS 40.0%
GGTAAACCTTAGGGAGAAAT+TGG + chr7_4:5963663-5963682 None:intergenic 40.0%
AAAGTCACAGGCTACATCTT+TGG - chr7_4:5963712-5963731 Msa1137240:intron 40.0%
! CTAACTTGGTAATAGTGACG+AGG + chr7_4:5963825-5963844 None:intergenic 40.0%
CGTCACTATTACCAAGTTAG+AGG - chr7_4:5963825-5963844 Msa1137240:intron 40.0%
CACTATTACCAAGTTAGAGG+GGG - chr7_4:5963828-5963847 Msa1137240:intron 40.0%
TTACACAAGAGACTGTTTCC+AGG + chr7_4:5963911-5963930 None:intergenic 40.0%
CTGCGTACAATACACCAAAA+TGG - chr7_4:5963945-5963964 Msa1137240:intron 40.0%
CGTACAATACACCAAAATGG+TGG - chr7_4:5963948-5963967 Msa1137240:intron 40.0%
TTCTTTCACACTGCTGTTGA+AGG + chr7_4:5964167-5964186 None:intergenic 40.0%
CAGCAGTGTGAAAGAACTAT+TGG - chr7_4:5964171-5964190 Msa1137240:intron 40.0%
CAATCTTTCTCTGGCATGTT+CGG - chr7_4:5964197-5964216 Msa1137240:intron 40.0%
TTGTTACCAGAAGGAACGAT+TGG - chr7_4:5964240-5964259 Msa1137240:intron 40.0%
CCGTCAACATCTAAACACAT+AGG + chr7_4:5964303-5964322 None:intergenic 40.0%
! TTGACGGACCGTACAAATAT+GGG - chr7_4:5964316-5964335 Msa1137240:intron 40.0%
AAGGAATTGCTGGATATGAC+AGG + chr7_4:5964360-5964379 None:intergenic 40.0%
TGTCATATCCAGCAATTCCT+TGG - chr7_4:5964359-5964378 Msa1137240:intron 40.0%
GGTCATCAAACCCCAAAAAA+TGG + chr7_4:5964403-5964422 None:intergenic 40.0%
! TTGATGACCCTCAGGTAAAT+TGG - chr7_4:5964414-5964433 Msa1137240:intron 40.0%
! AAACTGTTTGGGAGAGCTTT+TGG - chr7_4:5964487-5964506 Msa1137240:intron 40.0%
ATCTTGAACCCACAAGTAAC+TGG - chr7_4:5964834-5964853 Msa1137240:intron 40.0%
ACTTCTAGCCAGTTACTTGT+GGG + chr7_4:5964845-5964864 None:intergenic 40.0%
TTTGTTGATCGGAAACATCC+AGG - chr7_4:5964910-5964929 Msa1137240:intron 40.0%
TTTGATGCAACAATTGGCGA+TGG - chr7_4:5965101-5965120 Msa1137240:intron 40.0%
TTGATGCAACAATTGGCGAT+GGG - chr7_4:5965102-5965121 Msa1137240:intron 40.0%
ATTGCGTAAATGTGTCGTCT+GGG - chr7_4:5965128-5965147 Msa1137240:intron 40.0%
! TAAATGTGTCGTCTGGGATT+TGG - chr7_4:5965134-5965153 Msa1137240:intron 40.0%
ACTCTTTGTCTTAATCGGGA+CGG + chr7_4:5965375-5965394 None:intergenic 40.0%
CCGAACTCTTTGTCTTAATC+GGG + chr7_4:5965379-5965398 None:intergenic 40.0%
CCCGATTAAGACAAAGAGTT+CGG - chr7_4:5965376-5965395 Msa1137240:CDS 40.0%
GCCGAACTCTTTGTCTTAAT+CGG + chr7_4:5965380-5965399 None:intergenic 40.0%
ACTGATCAAAGACTTACCTG+AGG - chr7_4:5965449-5965468 Msa1137240:CDS 40.0%
CTGATCAAAGACTTACCTGA+GGG - chr7_4:5965450-5965469 Msa1137240:CDS 40.0%
GTAAAGTTGCCTGAAGAAGA+TGG - chr7_4:5965562-5965581 Msa1137240:CDS 40.0%
CAGACACTACTTATCAGGAA+AGG + chr7_4:5965669-5965688 None:intergenic 40.0%
AAGTAGTGTCTGTTTGTGAC+AGG - chr7_4:5965677-5965696 Msa1137240:CDS 40.0%
GGTACCATTGTTTCACAACT+TGG - chr7_4:5965698-5965717 Msa1137240:CDS 40.0%
TTCTTGACAACATCTGTGAC+AGG - chr7_4:5965730-5965749 Msa1137240:CDS 40.0%
TCTTGACAACATCTGTGACA+GGG - chr7_4:5965731-5965750 Msa1137240:CDS 40.0%
TCATCTCGAGAGAAGACTAA+AGG + chr7_4:5965762-5965781 None:intergenic 40.0%
AGTCTTCTCTCGAGATGAAA+AGG - chr7_4:5965764-5965783 Msa1137240:CDS 40.0%
GGACTTCAAAATGACGATCA+TGG - chr7_4:5965850-5965869 Msa1137240:CDS 40.0%
AATGAACACCATCCTTGGTA+CGG + chr7_4:5965930-5965949 None:intergenic 40.0%
CGAAACCAAAGTCTAAGCAA+AGG - chr7_4:5965968-5965987 Msa1137240:CDS 40.0%
CAATGCCTTTGCTTAGACTT+TGG + chr7_4:5965976-5965995 None:intergenic 40.0%
AAGACAAACAAATGTGGCTG+AGG + chr7_4:5966092-5966111 None:intergenic 40.0%
GGTACATAACCGATCATTTC+CGG - chr7_4:5966152-5966171 Msa1137240:intron 40.0%
AAGAAGTTTGAACTCTCCAC+AGG - chr7_4:5966417-5966436 Msa1137240:intron 40.0%
GCAGAAATATATGGCCGATA+TGG + chr7_4:5966466-5966485 None:intergenic 40.0%
AAGTACAAGGCAGCCTTAAA+AGG + chr7_4:5966787-5966806 None:intergenic 40.0%
GAGCACATGGTTGTAAGTGT+TGG + chr7_4:5961420-5961439 None:intergenic 45.0%
GAAAGAGAGAGTGAGTGAGA+GGG + chr7_4:5961466-5961485 None:intergenic 45.0%
TGAAAGAGAGAGTGAGTGAG+AGG + chr7_4:5961467-5961486 None:intergenic 45.0%
!! AGAGTGATGGATGGTACCTA+GGG + chr7_4:5961573-5961592 None:intergenic 45.0%
!! TAGAGTGATGGATGGTACCT+AGG + chr7_4:5961574-5961593 None:intergenic 45.0%
! ACTCCACCATGCTGATTACT+GGG + chr7_4:5962250-5962269 None:intergenic 45.0%
! ACTGCTCTTGCGAATTTTCC+GGG + chr7_4:5962392-5962411 None:intergenic 45.0%
CGCTTTCAATAGGGAGAGAA+GGG - chr7_4:5962540-5962559 Msa1137240:intron 45.0%
TCGCCGTGTTTGTATATGGA+TGG - chr7_4:5962563-5962582 Msa1137240:intron 45.0%
CCGTGTTTGTATATGGATGG+TGG - chr7_4:5962566-5962585 Msa1137240:intron 45.0%
!! TCGAGAGAATCGCTTGTTGT+TGG - chr7_4:5962677-5962696 Msa1137240:CDS 45.0%
!! GAATCGCTTGTTGTTGGATG+TGG - chr7_4:5962683-5962702 Msa1137240:CDS 45.0%
TGGTTCACATGTTGTCTCTC+CGG - chr7_4:5963344-5963363 Msa1137240:intron 45.0%
GCTACATCTTTGGCACCATT+TGG - chr7_4:5963722-5963741 Msa1137240:intron 45.0%
ACATCTTTGGCACCATTTGG+TGG - chr7_4:5963725-5963744 Msa1137240:intron 45.0%
CATCTTTGGCACCATTTGGT+GGG - chr7_4:5963726-5963745 Msa1137240:intron 45.0%
! ATCTTTGGCACCATTTGGTG+GGG - chr7_4:5963727-5963746 Msa1137240:intron 45.0%
ACAACTTTACCGTTGCGACA+AGG + chr7_4:5963856-5963875 None:intergenic 45.0%
GTTGTTGTCATGTGACCGAA+AGG - chr7_4:5963871-5963890 Msa1137240:intron 45.0%
GACTTGAACCTGTGACCTTT+CGG + chr7_4:5963889-5963908 None:intergenic 45.0%
GGATTTCCAATCGTTCCTTC+TGG + chr7_4:5964249-5964268 None:intergenic 45.0%
GGAACGATTGGAAATCCATG+TGG - chr7_4:5964252-5964271 Msa1137240:intron 45.0%
ACGATTGGAAATCCATGTGG+TGG - chr7_4:5964255-5964274 Msa1137240:intron 45.0%
ATCGTTGAGTTTCCACCACA+TGG + chr7_4:5964270-5964289 None:intergenic 45.0%
! GTTGACGGACCGTACAAATA+TGG - chr7_4:5964315-5964334 Msa1137240:intron 45.0%
!! ATATGACAGGAAGTGCCCAT+TGG + chr7_4:5964347-5964366 None:intergenic 45.0%
AAGCTACCCTGGAGAACTTA+TGG + chr7_4:5964555-5964574 None:intergenic 45.0%
!! GCTGTTTTCATAAGCTACCC+TGG + chr7_4:5964566-5964585 None:intergenic 45.0%
CACTTCTAGCCAGTTACTTG+TGG + chr7_4:5964846-5964865 None:intergenic 45.0%
AGCATATGCATTGTACTCGC+TGG - chr7_4:5964872-5964891 Msa1137240:intron 45.0%
CATTCACGCAATCAGCACAT+TGG - chr7_4:5964985-5965004 Msa1137240:intron 45.0%
GATTGCGTAAATGTGTCGTC+TGG - chr7_4:5965127-5965146 Msa1137240:intron 45.0%
GGTATTCCTACATGCAGTCA+TGG - chr7_4:5965284-5965303 Msa1137240:intron 45.0%
TCTTTGCCATGACTGCATGT+AGG + chr7_4:5965293-5965312 None:intergenic 45.0%
TGAGATGTCGAGACATGGAA+TGG - chr7_4:5965328-5965347 Msa1137240:intron 45.0%
! GCATTTTGAACGGCAGAGAT+GGG - chr7_4:5965398-5965417 Msa1137240:CDS 45.0%
CATTTCATCTTCTCCTCCCA+TGG + chr7_4:5965427-5965446 None:intergenic 45.0%
CATGGGAGGAGAAGATGAAA+TGG - chr7_4:5965425-5965444 Msa1137240:CDS 45.0%
AAGACTTACCTGAGGGTTTG+AGG - chr7_4:5965457-5965476 Msa1137240:CDS 45.0%
TAATGAGGTCCAAGCAAAGG+TGG + chr7_4:5965497-5965516 None:intergenic 45.0%
ATGAACACCATCCTTGGTAC+GGG + chr7_4:5965929-5965948 None:intergenic 45.0%
CGAACAATGAACACCATCCT+TGG + chr7_4:5965935-5965954 None:intergenic 45.0%
AGGATGGTGTTCATTGTTCG+CGG - chr7_4:5965935-5965954 Msa1137240:CDS 45.0%
TAGGCGACGAACTACTTTCT+TGG - chr7_4:5966029-5966048 Msa1137240:intron 45.0%
CGAGATACTACTCGTCGAAT+TGG - chr7_4:5966209-5966228 Msa1137240:intron 45.0%
ACTCGTCGAATTGGAGAACA+TGG - chr7_4:5966218-5966237 Msa1137240:intron 45.0%
CTCGTCGAATTGGAGAACAT+GGG - chr7_4:5966219-5966238 Msa1137240:intron 45.0%
CTTATAGACGTTACAGGCAG+AGG - chr7_4:5966263-5966282 Msa1137240:intron 45.0%
TTATCCCTTACAGGAGTCAC+CGG + chr7_4:5966298-5966317 None:intergenic 45.0%
GTGACTCCTGTAAGGGATAA+TGG - chr7_4:5966298-5966317 Msa1137240:intron 45.0%
! ACTCCTGTAAGGGATAATGG+AGG - chr7_4:5966301-5966320 Msa1137240:intron 45.0%
!! ATATTTATTTGTAATAATAT+TGG + chr7_4:5965179-5965198 None:intergenic 5.0%
GTTACGCAACGTAGAGTGGA+TGG + chr7_4:5961296-5961315 None:intergenic 50.0%
ACTGGTTACGCAACGTAGAG+TGG + chr7_4:5961300-5961319 None:intergenic 50.0%
! GTGTGACAGTGAAGAGCACA+TGG + chr7_4:5961433-5961452 None:intergenic 50.0%
AGAGAGTGAGTGAGAGGGTA+GGG + chr7_4:5961461-5961480 None:intergenic 50.0%
CGACAACCCAGTAATCAGCA+TGG - chr7_4:5962241-5962260 Msa1137240:CDS 50.0%
CAACCCAGTAATCAGCATGG+TGG - chr7_4:5962244-5962263 Msa1137240:intron 50.0%
! CACTCCACCATGCTGATTAC+TGG + chr7_4:5962251-5962270 None:intergenic 50.0%
ACAGTTGTCACCAACCCGAA+TGG - chr7_4:5962324-5962343 Msa1137240:intron 50.0%
CAGTTGTCACCAACCCGAAT+GGG - chr7_4:5962325-5962344 Msa1137240:intron 50.0%
TGGAACTAGATAGGAACCGG+CGG + chr7_4:5962357-5962376 None:intergenic 50.0%
GTTCCAATCCAAAACCGTCC+CGG - chr7_4:5962371-5962390 Msa1137240:intron 50.0%
!!! TTTCCGGGACGGTTTTGGAT+TGG + chr7_4:5962377-5962396 None:intergenic 50.0%
! CGAATTTTCCGGGACGGTTT+TGG + chr7_4:5962382-5962401 None:intergenic 50.0%
! CTCTTGCGAATTTTCCGGGA+CGG + chr7_4:5962388-5962407 None:intergenic 50.0%
AATTGCACGCGCTTGCTTCT+TGG + chr7_4:5962455-5962474 None:intergenic 50.0%
GCGCTTTCAATAGGGAGAGA+AGG - chr7_4:5962539-5962558 Msa1137240:intron 50.0%
AGGGTCGCCGTGTTTGTATA+TGG - chr7_4:5962559-5962578 Msa1137240:intron 50.0%
! TATGGATGGTGGTTTAGCGG+CGG - chr7_4:5962577-5962596 Msa1137240:intron 50.0%
TGGTTTAGCGGCGGTTGTTA+CGG - chr7_4:5962586-5962605 Msa1137240:intron 50.0%
TTGGATGTGGGAAACTCGTG+TGG - chr7_4:5962696-5962715 Msa1137240:CDS 50.0%
TGGATGTGGGAAACTCGTGT+GGG - chr7_4:5962697-5962716 Msa1137240:CDS 50.0%
ACATGTTGTCTCTCCGGTGT+TGG - chr7_4:5963350-5963369 Msa1137240:intron 50.0%
GAGACCAAATCCCCACCAAA+TGG + chr7_4:5963740-5963759 None:intergenic 50.0%
TCATGTGACCGAAAGGTCAC+AGG - chr7_4:5963878-5963897 Msa1137240:intron 50.0%
AAGGTCACAGGTTCAAGTCC+TGG - chr7_4:5963890-5963909 Msa1137240:intron 50.0%
CTAAAGCTCCCGCATACACA+GGG + chr7_4:5963988-5964007 None:intergenic 50.0%
ACTAAAGCTCCCGCATACAC+AGG + chr7_4:5963989-5964008 None:intergenic 50.0%
! TATAGGTTGCTGGAGGGTGT+TGG - chr7_4:5964109-5964128 Msa1137240:intron 50.0%
TCTTTCTCTGGCATGTTCGG+AGG - chr7_4:5964200-5964219 Msa1137240:intron 50.0%
CTTGACAGCCAAGGAATTGC+TGG + chr7_4:5964370-5964389 None:intergenic 50.0%
! TTTGGGGTTTGATGACCCTC+AGG - chr7_4:5964406-5964425 Msa1137240:intron 50.0%
CACGCAATCAGCACATTGGT+TGG - chr7_4:5964989-5965008 Msa1137240:intron 50.0%
!! GTCTGGGATTTGGTGATTGC+AGG - chr7_4:5965144-5965163 Msa1137240:intron 50.0%
GATGTCGAGACATGGAATGG+TGG - chr7_4:5965331-5965350 Msa1137240:intron 50.0%
!! GAGACATGGAATGGTGGATG+AGG - chr7_4:5965337-5965356 Msa1137240:intron 50.0%
!! ACATGGAATGGTGGATGAGG+AGG - chr7_4:5965340-5965359 Msa1137240:intron 50.0%
! GGCATTTTGAACGGCAGAGA+TGG - chr7_4:5965397-5965416 Msa1137240:CDS 50.0%
! TTTTGAACGGCAGAGATGGG+CGG - chr7_4:5965401-5965420 Msa1137240:CDS 50.0%
ATGTCTCTCCTCAAACCCTC+AGG + chr7_4:5965468-5965487 None:intergenic 50.0%
! CTAAGAAACCTCCTGGTTCG+AGG + chr7_4:5966012-5966031 None:intergenic 50.0%
CTCGAACCAGGAGGTTTCTT+AGG - chr7_4:5966010-5966029 Msa1137240:intron 50.0%
! TTCGACGCCCTTTTATCGAC+CGG - chr7_4:5966056-5966075 Msa1137240:intron 50.0%
CTGGAAGCCGGTCGATAAAA+GGG + chr7_4:5966066-5966085 None:intergenic 50.0%
ACAAATGTGGCTGAGGAAGC+TGG + chr7_4:5966085-5966104 None:intergenic 50.0%
GTGCCTCCATTATCCCTTAC+AGG + chr7_4:5966307-5966326 None:intergenic 50.0%
!! ATAATGGAGGCACTGAGCGT+AGG - chr7_4:5966314-5966333 Msa1137240:intron 50.0%
GAGAGAGTGAGTGAGAGGGT+AGG + chr7_4:5961462-5961481 None:intergenic 55.0%
CTAGGGAGAGAGGAGAAGGT+GGG + chr7_4:5961556-5961575 None:intergenic 55.0%
GTACCTAGGGAGAGAGGAGA+AGG + chr7_4:5961560-5961579 None:intergenic 55.0%
TGGATGGTACCTAGGGAGAG+AGG + chr7_4:5961566-5961585 None:intergenic 55.0%
TGGGTTGTCGTCTGCTGAGA+CGG + chr7_4:5962231-5962250 None:intergenic 55.0%
ACAACTGTCTGCACAGCTGG+TGG + chr7_4:5962312-5962331 None:intergenic 55.0%
GTGACAACTGTCTGCACAGC+TGG + chr7_4:5962315-5962334 None:intergenic 55.0%
!! GTTAGCGCGTGGTGTTGCTT+TGG - chr7_4:5962493-5962512 Msa1137240:intron 55.0%
TTTAGCGGCGGTTGTTACGG+TGG - chr7_4:5962589-5962608 Msa1137240:intron 55.0%
! GGCACCATTTGGTGGGGATT+TGG - chr7_4:5963733-5963752 Msa1137240:intron 55.0%
ACAAGGCTCCCCCTCTAACT+TGG + chr7_4:5963839-5963858 None:intergenic 55.0%
CATACACAGGGTTCGGGAAG+GGG + chr7_4:5963976-5963995 None:intergenic 55.0%
GCATACACAGGGTTCGGGAA+GGG + chr7_4:5963977-5963996 None:intergenic 55.0%
CTTCCCGAACCCTGTGTATG+CGG - chr7_4:5963976-5963995 Msa1137240:intron 55.0%
TTCCCGAACCCTGTGTATGC+GGG - chr7_4:5963977-5963996 Msa1137240:intron 55.0%
TTCTCTGGCATGTTCGGAGG+AGG - chr7_4:5964203-5964222 Msa1137240:intron 55.0%
GCAGCTGAGATGTCGAGACA+TGG - chr7_4:5965323-5965342 Msa1137240:intron 55.0%
!! TGGAATGGTGGATGAGGAGG+AGG - chr7_4:5965343-5965362 Msa1137240:intron 55.0%
CATCAAGCGCCACCTTTGCT+TGG - chr7_4:5965485-5965504 Msa1137240:CDS 55.0%
GAGAAGGAGATCCCGTACCA+AGG - chr7_4:5965915-5965934 Msa1137240:CDS 55.0%
AGGAGATCCCGTACCAAGGA+TGG - chr7_4:5965919-5965938 Msa1137240:CDS 55.0%
GCAACTAGTGTCCTCGAACC+AGG - chr7_4:5965998-5966017 Msa1137240:CDS 55.0%
ACTAGTGTCCTCGAACCAGG+AGG - chr7_4:5966001-5966020 Msa1137240:CDS 55.0%
TCGTCGCCTAAGAAACCTCC+TGG + chr7_4:5966019-5966038 None:intergenic 55.0%
!! GGTCGATAAAAGGGCGTCGA+AGG + chr7_4:5966057-5966076 None:intergenic 55.0%
GCTGGAAGCCGGTCGATAAA+AGG + chr7_4:5966067-5966086 None:intergenic 55.0%
CGTTACAGGCAGAGGACTAG+AGG - chr7_4:5966271-5966290 Msa1137240:intron 55.0%
AGGTCCGGTGACTCCTGTAA+GGG - chr7_4:5966291-5966310 Msa1137240:intron 55.0%
GAGAGAGGAGAAGGTGGGCA+TGG + chr7_4:5961551-5961570 None:intergenic 60.0%
CCTAGGGAGAGAGGAGAAGG+TGG + chr7_4:5961557-5961576 None:intergenic 60.0%
CCACCTTCTCCTCTCTCCCT+AGG - chr7_4:5961554-5961573 Msa1137240:three_prime_UTR 60.0%
GGTGACAGCAGTGATGACCC+TGG - chr7_4:5962200-5962219 Msa1137240:CDS 60.0%
CTGCTGAGACGGCAACTCCA+GGG + chr7_4:5962220-5962239 None:intergenic 60.0%
TCTGCTGAGACGGCAACTCC+AGG + chr7_4:5962221-5962240 None:intergenic 60.0%
CAGCTGGTGGAGTGGAACAC+TGG + chr7_4:5962299-5962318 None:intergenic 60.0%
TGTCTGCACAGCTGGTGGAG+TGG + chr7_4:5962307-5962326 None:intergenic 60.0%
CGCTAACAACAACGCGCGGT+TGG + chr7_4:5962480-5962499 None:intergenic 60.0%
CACGCGCTAACAACAACGCG+CGG + chr7_4:5962484-5962503 None:intergenic 60.0%
GGTTGTTACGGTGGCGCGTA+CGG - chr7_4:5962598-5962617 Msa1137240:intron 60.0%
! GGGAAGGGGTCCCACCATTT+TGG + chr7_4:5963962-5963981 None:intergenic 60.0%
CGCATACACAGGGTTCGGGA+AGG + chr7_4:5963978-5963997 None:intergenic 60.0%
CTCCCGCATACACAGGGTTC+GGG + chr7_4:5963982-5964001 None:intergenic 60.0%
GCTCCCGCATACACAGGGTT+CGG + chr7_4:5963983-5964002 None:intergenic 60.0%
TGGCTGAGGAAGCTGGAAGC+CGG + chr7_4:5966078-5966097 None:intergenic 60.0%
CAGGCAGAGGACTAGAGGTC+CGG - chr7_4:5966276-5966295 Msa1137240:intron 60.0%
GAGGTCCGGTGACTCCTGTA+AGG - chr7_4:5966290-5966309 Msa1137240:intron 60.0%
CGGACGCTTCCCATTCGGGT+TGG + chr7_4:5962337-5962356 None:intergenic 65.0%
ACCGGCGGACGCTTCCCATT+CGG + chr7_4:5962342-5962361 None:intergenic 65.0%
! CGCGCGTTGTTGTTAGCGCG+TGG - chr7_4:5962482-5962501 Msa1137240:intron 65.0%
TGTTACGGTGGCGCGTACGG+TGG - chr7_4:5962601-5962620 Msa1137240:intron 65.0%
! GGCGCGTACGGTGGTTGATG+CGG - chr7_4:5962610-5962629 Msa1137240:intron 65.0%
! GAGGGGGAGCCTTGTCGCAA+CGG - chr7_4:5963844-5963863 Msa1137240:intron 65.0%
CCGGCGGACGCTTCCCATTC+GGG + chr7_4:5962341-5962360 None:intergenic 70.0%
!! CCCGAATGGGAAGCGTCCGC+CGG - chr7_4:5962338-5962357 Msa1137240:intron 70.0%
ACGGCAGAGATGGGCGGCCA+TGG - chr7_4:5965407-5965426 Msa1137240:CDS 70.0%
CGGCAGAGATGGGCGGCCAT+GGG - chr7_4:5965408-5965427 Msa1137240:CDS 70.0%
CAGAGATGGGCGGCCATGGG+AGG - chr7_4:5965411-5965430 Msa1137240:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 5961256 5966914 5961256 ID=Msa1137240;Name=Msa1137240
chr7_4 mRNA 5961256 5966914 5961256 ID=Msa1137240-mRNA-1;Parent=Msa1137240;Name=Msa1137240-mRNA-1;_AED=0.14;_eAED=0.14;_QI=294|0.8|1|1|0.8|0.66|6|492|497
chr7_4 exon 5961256 5961731 5961256 ID=Msa1137240-mRNA-1:exon:1655;Parent=Msa1137240-mRNA-1
chr7_4 exon 5961761 5962262 5961761 ID=Msa1137240-mRNA-1:exon:1654;Parent=Msa1137240-mRNA-1
chr7_4 exon 5962385 5962471 5962385 ID=Msa1137240-mRNA-1:exon:1653;Parent=Msa1137240-mRNA-1
chr7_4 exon 5962649 5962885 5962649 ID=Msa1137240-mRNA-1:exon:1652;Parent=Msa1137240-mRNA-1
chr7_4 exon 5965368 5966025 5965368 ID=Msa1137240-mRNA-1:exon:1651;Parent=Msa1137240-mRNA-1
chr7_4 exon 5966595 5966914 5966595 ID=Msa1137240-mRNA-1:exon:1650;Parent=Msa1137240-mRNA-1
chr7_4 five_prime_UTR 5966621 5966914 5966621 ID=Msa1137240-mRNA-1:five_prime_utr;Parent=Msa1137240-mRNA-1
chr7_4 CDS 5966595 5966620 5966595 ID=Msa1137240-mRNA-1:cds;Parent=Msa1137240-mRNA-1
chr7_4 CDS 5965368 5966025 5965368 ID=Msa1137240-mRNA-1:cds;Parent=Msa1137240-mRNA-1
chr7_4 CDS 5962649 5962885 5962649 ID=Msa1137240-mRNA-1:cds;Parent=Msa1137240-mRNA-1
chr7_4 CDS 5962385 5962471 5962385 ID=Msa1137240-mRNA-1:cds;Parent=Msa1137240-mRNA-1
chr7_4 CDS 5961777 5962262 5961777 ID=Msa1137240-mRNA-1:cds;Parent=Msa1137240-mRNA-1
chr7_4 three_prime_UTR 5961761 5961776 5961761 ID=Msa1137240-mRNA-1:three_prime_utr;Parent=Msa1137240-mRNA-1
chr7_4 three_prime_UTR 5961256 5961731 5961256 ID=Msa1137240-mRNA-1:three_prime_utr;Parent=Msa1137240-mRNA-1
Gene Sequence

>Msa1137240

ATGCCCACCTTCTCCTCTCTCCCTAGGTGGATTGGTGGAAAATTCTTGGGAAGGAATCCTAGCAACACAATCAACAACGTTGGTGACAGCAGTGATGACCCTGGAGTTGCCGTCTCAGCAGACGACAACCCAGTAATCAGCATGGTGGAGTGTTATGCATGCACACAAGTTGGTGTGCCAGTGTTCCACTCCACCAGCTGTGCAGACAGTTGTCACCAACCCGAATGGGAAGCGTCCGCCGGTTCCTATCTAGTTCCAATCCAAAACCGTCCCGGAAAATTCGCAAGAGCAGTATCAAAGCCAAATTGGGGAGTTTTAGGCAAAGTATTAGATCCAAGAAGCAAGCGCGTGCAATTATCCAACCGCGCGTTGTTGTTAGCGCGTGGTGTTGCTTTGGCTATTGATCCGTTGTTTTTCTACGCGCTTTCAATAGGGAGAGAAGGGTCGCCGTGTTTGTATATGGATGGTGGTTTAGCGGCGGTTGTTACGGTGGCGCGTACGGTGGTTGATGCGGTGCATTTGTTTCATGTTTGGTTGCAGTTTAGATTAGCGTATGTGTCGAGAGAATCGCTTGTTGTTGGATGTGGGAAACTCGTGTGGGACGCACGTGCCATTGCTTCTCATTATATGAGATCTTTCAAAGGTTTTTGGTTTGATGTTTTTGTTATTCTTCCTGTTCCTCAGGTATTCCTACATGCAGTCATGGCAAAGAAGAGAAAGATGCAGCTGAGATGTCGAGACATGGAATGGTGGATGAGGAGGAGGCAGTTGCCGTCCCGATTAAGACAAAGAGTTCGGCATTTTGAACGGCAGAGATGGGCGGCCATGGGAGGAGAAGATGAAATGGAACTGATCAAAGACTTACCTGAGGGTTTGAGGAGAGACATCAAGCGCCACCTTTGCTTGGACCTCATTAAAAAGGTACCATTGTTTCACAACTTGGATGATCTTATTCTTGACAACATCTGTGACAGGGTGAAGCCTTTAGTCTTCTCTCGAGATGAAAAGATAATTAGAGAAGGAGATCCCGTACCAAGGATGGTGTTCATTGTTCGCGGACGCATAAAGCGAAACCAAAGTCTAAGCAAAGGCATTGTAGCAACTAGTGTCCTCGAACCAGGAGGTTTCTTAGGCGACGAACTACTTTCTTGGTGCCTTCGACGCCCTTTTATCGACCGGCTTCCAGCTTCCTCAGCCACATTTGTTTGTCTTGAATCAACTGAAGCATTCGGTCTTGATGCTCAAAACTTAAGGTACATAACCGATCATTTCCGGTACAAATTTGCAAATGAGAGGCTAAAGAGAACGGCGAGATACTACTCGTCGAATTGGAGAACATGGGCTGCAGTTAACATTCAACTTGCTTATAGACGTTACAGGCAGAGGACTAGAGGTCCGGTGACTCCTGTAAGGGATAATGGAGGCACTGAGCGTAGGCTTATGCAATACGCTGCAATGTTCATGTCAATTAGGCCACATGATCATCTTGAATGA
Protein sequence

>Msa1137240

MPTFSSLPRWIGGKFLGRNPSNTINNVGDSSDDPGVAVSADDNPVISMVECYACTQVGVPVFHSTSCADSCHQPEWEASAGSYLVPIQNRPGKFARAVSKPNWGVLGKVLDPRSKRVQLSNRALLLARGVALAIDPLFFYALSIGREGSPCLYMDGGLAAVVTVARTVVDAVHLFHVWLQFRLAYVSRESLVVGCGKLVWDARAIASHYMRSFKGFWFDVFVILPVPQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSRLRQRVRHFERQRWAAMGGEDEMELIKDLPEGLRRDIKRHLCLDLIKKVPLFHNLDDLILDNICDRVKPLVFSRDEKIIREGDPVPRMVFIVRGRIKRNQSLSKGIVATSVLEPGGFLGDELLSWCLRRPFIDRLPASSATFVCLESTEAFGLDAQNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAYRRYRQRTRGPVTPVRDNGGTERRLMQYAAMFMSIRPHDHLE*