AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0024240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0024240 MtrunA17_Chr1g0178091 96.004 926 17 1 1 926 1 906 0.0 1822
Msa0024240 MtrunA17_Chr7g0266791 64.339 931 275 11 1 925 1 880 0.0 1115
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0024240 AT3G11560.3 58.965 831 292 8 84 909 70 856 0.0 968
Msa0024240 AT3G11560.2 58.965 831 292 8 84 909 70 856 0.0 968
Msa0024240 AT3G11560.4 58.965 831 292 8 84 909 70 856 0.0 968
Msa0024240 AT5G06220.3 54.100 939 358 16 1 924 1 881 0.0 932
Msa0024240 AT5G06220.2 52.500 960 366 17 1 924 1 906 0.0 903
Msa0024240 AT5G06220.1 50.427 936 345 16 1 924 1 829 0.0 824
Msa0024240 AT3G11560.1 60.139 577 188 5 84 655 70 609 0.0 704
Msa0024240 AT3G11560.5 60.139 577 188 5 84 655 70 609 0.0 704

Find 256 sgRNAs with CRISPR-Local

Find 945 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCTGCGTTCTTCGCTTTC+TGG 0.066218 1_1:+46511124 Msa0024240:three_prime_UTR
AGGTTCCGGGTCGGGCTTTC+TGG 0.093751 1_1:-46507335 None:intergenic
CATTTGCTGTTTGCTCTTAT+TGG 0.123771 1_1:+46504184 Msa0024240:CDS
CATCCTTTCAAAAGTATATT+TGG 0.146338 1_1:-46511508 Msa0024250:intron
GAGAAGGATTTGGCTATATT+TGG 0.149892 1_1:+46503520 Msa0024240:CDS
ATTGCCTACTATTTAGTAAA+TGG 0.157021 1_1:+46498991 Msa0024240:CDS
GAATTATAAGCTTGACTTAC+AGG 0.172414 1_1:-46502709 None:intergenic
CTCAAGAGATCCAACCTTTC+TGG 0.181342 1_1:-46510952 None:intergenic
CTTCCTGGTCTGATGAAAAT+TGG 0.184892 1_1:+46511099 Msa0024240:three_prime_UTR
CCTTAACGGAAGAAAATTAT+TGG 0.191136 1_1:-46496639 None:intergenic
GTTTAAACTTCCTCAAATTC+TGG 0.222075 1_1:+46511809 Msa0024240:three_prime_UTR
TTTATTACAGGTATCTTATT+GGG 0.237944 1_1:+46503900 Msa0024240:intron
ATTTATTACAGGTATCTTAT+TGG 0.238493 1_1:+46503899 Msa0024240:intron
AGAGAATTTCTTGTACATTT+TGG 0.238907 1_1:+46502754 Msa0024240:CDS
TGGGTCACTGCTTCTGCATT+TGG 0.242483 1_1:-46504159 None:intergenic
TCTGCATTTGGAGGACCTTC+TGG 0.248549 1_1:-46504147 None:intergenic
GGTTCCTGGTTCCCGATATT+TGG 0.265711 1_1:+46511264 Msa0024240:three_prime_UTR
TTCACTTGCAGCATATAATA+AGG 0.269650 1_1:-46501613 None:intergenic
GAAGGATTTCATTGGGTTCT+TGG 0.270749 1_1:-46508785 None:intergenic
TGTGACTGTTTGAGAGCTTA+TGG 0.275671 1_1:+46511627 Msa0024240:three_prime_UTR
GGAGCATCGGGTGGGGTTCC+TGG 0.280362 1_1:+46511250 Msa0024240:three_prime_UTR
TTTGGATTCTTTATTGCTTT+AGG 0.283500 1_1:+46503538 Msa0024240:CDS
TTGGAAAATCTCGTGGATTC+TGG 0.286568 1_1:+46507290 Msa0024240:CDS
ATCCACGTGATGACGATTTA+TGG 0.292434 1_1:-46499316 None:intergenic
CTGACTGATAGGCACTTCTT+TGG 0.308188 1_1:-46508854 None:intergenic
CAACTCCTCTCTAAGAAATA+TGG 0.312711 1_1:-46511163 Msa0024250:CDS
AGGACAAATCATGTTGAATA+AGG 0.322447 1_1:-46499034 None:intergenic
GGTTCCGGGTCGGGCTTTCT+GGG 0.326767 1_1:-46507334 None:intergenic
TTGCCTACTATTTAGTAAAT+GGG 0.337487 1_1:+46498992 Msa0024240:CDS
TTTGTTAGCTATACATAAAT+CGG 0.341761 1_1:-46511066 None:intergenic
TAAGAAAGAAGCTGAATTCC+TGG 0.342804 1_1:+46506015 Msa0024240:CDS
TTTGAACATCACATATCTTT+CGG 0.342805 1_1:-46511311 Msa0024250:CDS
TCCATGAGCACTGAGATAAC+TGG 0.352935 1_1:+46502655 Msa0024240:CDS
CTGAAGTGTACGAATGGTTT+TGG 0.355223 1_1:+46502313 Msa0024240:CDS
CTCAAAGCGAAGGATTTCAT+TGG 0.379425 1_1:-46508793 None:intergenic
GGGTCGGGCTTTCTGGGTAT+AGG 0.385827 1_1:-46507328 None:intergenic
TCAAGCTTATAATTCTATAA+AGG 0.386303 1_1:+46502717 Msa0024240:CDS
ATACAATTGATATGAACTAA+TGG 0.391551 1_1:-46503954 None:intergenic
ACAAAACTTAACATTCTTCC+TGG 0.391665 1_1:+46511084 Msa0024240:three_prime_UTR
TGGTCCACAACCCCTACATT+TGG 0.398293 1_1:-46508765 None:intergenic
GGTCAGATGATTGTATATAT+AGG 0.399367 1_1:+46503747 Msa0024240:CDS
TGAGCATCCACATCAGGTTC+CGG 0.399986 1_1:-46507349 None:intergenic
TGTTAGGCACAACAAGTTGA+TGG 0.400862 1_1:+46504366 Msa0024240:intron
AAGTACACGAACATTTCTTT+TGG 0.405597 1_1:+46503564 Msa0024240:CDS
TTTGTGATGCTGGTGATTCC+CGG 0.407876 1_1:-46504102 None:intergenic
TCCACATCAGGTTCCGGGTC+GGG 0.407937 1_1:-46507343 None:intergenic
CTGCCTCGGGTTTGGTCAAA+AGG 0.408786 1_1:+46509737 Msa0024240:CDS
TGAGATAACTGGTAGTTTGA+TGG 0.414550 1_1:+46502666 Msa0024240:CDS
GTCACTGCTTCTGCATTTGG+AGG 0.415112 1_1:-46504156 None:intergenic
ACGGTCACCCTTCCAAATAT+CGG 0.418287 1_1:-46511276 Msa0024250:CDS
TTTGAAAGGATGACTAAAAT+GGG 0.423551 1_1:+46511519 Msa0024240:three_prime_UTR
AACTGAAGCCATGTCAGTTA+AGG 0.424587 1_1:-46509812 None:intergenic
CATGTGTCAAGCTCTAGTTC+TGG 0.429376 1_1:+46505941 Msa0024240:CDS
TATTGATGTTGGTGCTGCCT+CGG 0.429403 1_1:+46509723 Msa0024240:CDS
TTCGTACACTTCAGGCTGTT+TGG 0.429694 1_1:-46502304 None:intergenic
CTGGTGATTCCCGGATAAAA+AGG 0.430228 1_1:-46504093 None:intergenic
CACCGGTTGGTGAGGAGGAC+AGG 0.430373 1_1:+46507083 Msa0024240:CDS
TTTGACAAACTAAAAGAAAC+GGG 0.431505 1_1:+46509423 Msa0024240:CDS
ATGCCTTCACCCATGCGGTT+TGG 0.433558 1_1:-46499370 None:intergenic
TGTTGGTGCTGCCTCGGGTT+TGG 0.433951 1_1:+46509729 Msa0024240:CDS
AGCTGATGGAACTTGAGAAA+AGG 0.434158 1_1:+46508829 Msa0024240:CDS
AACCCCACCCGATGCTCCTC+AGG 0.434501 1_1:-46511245 Msa0024250:CDS
TTCACACAGGTTACTGCCGT+TGG 0.436149 1_1:+46510756 Msa0024240:intron
CATATTTCTTAGAGAGGAGT+TGG 0.437810 1_1:+46511164 Msa0024240:three_prime_UTR
ATAAGTTCATTCCACGTGTC+TGG 0.438600 1_1:+46511193 Msa0024240:three_prime_UTR
GAGCATCCACATCAGGTTCC+GGG 0.438761 1_1:-46507348 None:intergenic
ATGGATGAAGTTAAATGATC+AGG 0.441279 1_1:+46511036 Msa0024240:exon
CTCCAGCATCACCGTTATAA+CGG 0.441709 1_1:-46509350 None:intergenic
AAATCTTCAATTGGATCATC+GGG 0.443539 1_1:-46503604 None:intergenic
ATTGATGTTGGTGCTGCCTC+GGG 0.446845 1_1:+46509724 Msa0024240:CDS
CAACCTTTCTGGTGCATAAG+TGG 0.447890 1_1:-46510941 None:intergenic
GAGAAATGGATTTACCTTAA+CGG 0.448654 1_1:-46496653 None:intergenic
CAAAACCATTCGTACACTTC+AGG 0.449478 1_1:-46502312 None:intergenic
TCCTTTGTTAATAAGTTTGA+AGG 0.449982 1_1:+46502363 Msa0024240:CDS
GAAAAGAGCGAAATAGAGAA+AGG 0.450818 1_1:-46496523 None:intergenic
TCCAGCATCACCGTTATAAC+GGG 0.453068 1_1:-46509349 None:intergenic
TCACATATCTTTCGGAATTG+AGG 0.454039 1_1:-46511303 Msa0024250:CDS
AAGAGCAAACAGCAAATGCT+TGG 0.455991 1_1:-46504179 None:intergenic
GAAATCTTCAATTGGATCAT+CGG 0.456727 1_1:-46503605 None:intergenic
CACTTATGCACCAGAAAGGT+TGG 0.457686 1_1:+46510942 Msa0024240:CDS
TTCTATCTCTGCTATCATCT+CGG 0.457753 1_1:-46501644 None:intergenic
CAACTTCTTGCTATTGATGT+TGG 0.459877 1_1:+46509712 Msa0024240:CDS
TGTAGATTCAGATGATGAAA+TGG 0.461113 1_1:+46511017 Msa0024240:CDS
ATCCAATTGAAGATTTCATC+AGG 0.465735 1_1:+46503611 Msa0024240:CDS
GCTAAGGCTATCTGCTCCCT+TGG 0.466582 1_1:+46502254 Msa0024240:CDS
GAAAGCAGCCTGTTCTGACT+TGG 0.466824 1_1:+46505976 Msa0024240:CDS
TCACACAGGTTACTGCCGTT+GGG 0.466862 1_1:+46510757 Msa0024240:intron
ACCAGTTATCTCAGTGCTCA+TGG 0.469402 1_1:-46502656 None:intergenic
CCATTTGCTACCTCTGATGA+TGG 0.469525 1_1:+46499137 Msa0024240:CDS
CTAGTTGTACTGCTAGCATT+TGG 0.473312 1_1:+46503726 Msa0024240:CDS
GTTAATAAGTTTGAAGGGGA+CGG 0.473421 1_1:+46502369 Msa0024240:CDS
ACAAAGGACGTCACTACAGC+TGG 0.474919 1_1:-46502348 None:intergenic
CAAATTCTTCAATCGTTACA+TGG 0.475749 1_1:+46496598 Msa0024240:exon
AACCTGTCCTCCTCACCAAC+CGG 0.476504 1_1:-46507085 None:intergenic
TCAAAGCGAAGGATTTCATT+GGG 0.478454 1_1:-46508792 None:intergenic
CTACAATCCTGAGGAGCATC+GGG 0.479635 1_1:+46511238 Msa0024240:three_prime_UTR
AACAGCCTGCACCAAATGTA+GGG 0.479756 1_1:+46508754 Msa0024240:CDS
ATTCCACGTGTCTGGCACTC+CGG 0.480121 1_1:+46511201 Msa0024240:three_prime_UTR
TACCTGATGAAATCTTCAAT+TGG 0.481210 1_1:-46503613 None:intergenic
GATATAAATACGTTGTAATA+CGG 0.481799 1_1:+46511379 Msa0024240:three_prime_UTR
AATCGTCATCACGTGGATCC+TGG 0.482075 1_1:+46499321 Msa0024240:CDS
CCATCATCAGAGGTAGCAAA+TGG 0.483136 1_1:-46499137 None:intergenic
GCCCGTTATAACGGTGATGC+TGG 0.483322 1_1:+46509348 Msa0024240:CDS
TTGGTCAAAAGGACCTTGAT+AGG 0.486944 1_1:+46509748 Msa0024240:CDS
ATTGCTGCAATTGCTAAACT+TGG 0.487614 1_1:+46502601 Msa0024240:CDS
GTTGTAAAAGAGATGCAATA+TGG 0.488049 1_1:-46511352 Msa0024250:CDS
TCTATCTCTGCTATCATCTC+GGG 0.488428 1_1:-46501643 None:intergenic
TGCACCAAATGTAGGGGTTG+TGG 0.488543 1_1:+46508761 Msa0024240:CDS
AAGAGATGCAATATGGAAGC+TGG 0.489238 1_1:-46511345 Msa0024250:CDS
TAAATGGGGCAGTTCAAGAA+AGG 0.492643 1_1:+46499007 Msa0024240:CDS
TGCAATTGCTAAACTTGGCC+CGG 0.494454 1_1:+46502606 Msa0024240:CDS
CCTGGTTCCCGATATTTGGA+AGG 0.494657 1_1:+46511268 Msa0024240:three_prime_UTR
GCTGATGGAACTTGAGAAAA+GGG 0.494748 1_1:+46508830 Msa0024240:CDS
CGGTCACCCTTCCAAATATC+GGG 0.498571 1_1:-46511275 Msa0024250:CDS
ATCATCTGAATCTACATCAC+TGG 0.500007 1_1:-46511010 None:intergenic
TAAAGGTGGACAGGAGCAAA+AGG 0.500329 1_1:+46507140 Msa0024240:CDS
TAGTTTGTGAAGAGCTGGAT+TGG 0.501881 1_1:+46504067 Msa0024240:CDS
AAGCTTTATATGATGCAGCC+AGG 0.502582 1_1:+46499270 Msa0024240:CDS
AGTCAATTCATCACCTATCA+AGG 0.502757 1_1:-46509761 None:intergenic
ATGGAGTGCATGGATGAACT+TGG 0.503782 1_1:+46504385 Msa0024240:CDS
GTTGCAGCAGGCTATTGATA+AGG 0.504330 1_1:+46502858 Msa0024240:CDS
TGCCCCATTTACTAAATAGT+AGG 0.504706 1_1:-46498995 None:intergenic
AGGAGGACAGGTTTATGAAA+GGG 0.505159 1_1:+46507095 Msa0024240:CDS
TTAATAAGTTTGAAGGGGAC+GGG 0.506571 1_1:+46502370 Msa0024240:CDS
TCGAATTGCTGCCTTTCGAA+TGG 0.509589 1_1:+46498933 Msa0024240:CDS
CATACATGAGCATCCACATC+AGG 0.511008 1_1:-46507355 None:intergenic
TCGAATGGTTCCACAAGTGT+AGG 0.511585 1_1:+46498948 Msa0024240:CDS
CTCCTCAGGATTGTAGCCAC+TGG 0.511858 1_1:-46511231 Msa0024250:CDS
TTCCACGTGTCTGGCACTCC+GGG 0.514233 1_1:+46511202 Msa0024240:three_prime_UTR
TTCATATCAATTGTATGTTG+AGG 0.514605 1_1:+46503961 Msa0024240:CDS
CTCCTCACCAACCGGTGTGA+TGG 0.515931 1_1:-46507077 None:intergenic
CGTTGGGCATGCAGCAATGT+TGG 0.517058 1_1:+46510773 Msa0024240:CDS
TTAGCACTGGCGTCAGCTTG+TGG 0.517278 1_1:-46499179 None:intergenic
AGTCTGTACAGTGAAATTGC+AGG 0.520302 1_1:-46511480 Msa0024250:intron
GAACAGCCTGCACCAAATGT+AGG 0.520502 1_1:+46508753 Msa0024240:CDS
TGCATTGGTCCAGTTTGCTA+AGG 0.521404 1_1:+46502238 Msa0024240:intron
CATCCACTTATGCACCAGAA+AGG 0.521547 1_1:+46510938 Msa0024240:CDS
ATATTTCTTAGAGAGGAGTT+GGG 0.521772 1_1:+46511165 Msa0024240:three_prime_UTR
CGAATGGTTCCACAAGTGTA+GGG 0.522305 1_1:+46498949 Msa0024240:CDS
GCTACAATCCTGAGGAGCAT+CGG 0.523452 1_1:+46511237 Msa0024240:three_prime_UTR
CTATTGATAAGGAGAAAATA+TGG 0.523593 1_1:+46502869 Msa0024240:CDS
TTATTACAGGTATCTTATTG+GGG 0.523663 1_1:+46503901 Msa0024240:intron
ATTCGAAAGGCAGCAATTCG+AGG 0.525886 1_1:-46498931 None:intergenic
TTCTCTGATTAAGCTCTCCA+AGG 0.529124 1_1:-46502271 None:intergenic
GGTGAAGGCATTGTCATGTC+AGG 0.529130 1_1:+46499382 Msa0024240:CDS
ATGTCAATGTATTTGTTCAA+AGG 0.529604 1_1:+46501667 Msa0024240:CDS
TGTAGCCACTGGTGTTTACC+CGG 0.530101 1_1:-46511220 Msa0024250:CDS
ATGACAATGTAAAGGTGGAC+AGG 0.530740 1_1:+46507131 Msa0024240:CDS
TTGCTCGGAAAGATGCCTCC+AGG 0.532885 1_1:-46506033 None:intergenic
AACTAATGGATGAGAGTTGT+GGG 0.533106 1_1:-46503940 None:intergenic
ATAGGTAGTTTGTGAAGAGC+TGG 0.533672 1_1:+46504062 Msa0024240:intron
ATGGCTTCAGTTGTTCCTAT+CGG 0.533849 1_1:+46509823 Msa0024240:CDS
CAATGCATGTAAGTGCAAGC+AGG 0.534320 1_1:-46502582 None:intergenic
GGTTCAGAAGCAGTTGCAGC+AGG 0.535038 1_1:+46502846 Msa0024240:CDS
AGACAAATTGGAAAATCTCG+TGG 0.536140 1_1:+46507283 Msa0024240:intron
TATAATTCTATAAAGGATGT+TGG 0.536506 1_1:+46502724 Msa0024240:CDS
AGGAATGGCACATGGAATGA+AGG 0.537052 1_1:-46511460 Msa0024250:CDS
AGAGCAAACAGCAAATGCTT+GGG 0.537493 1_1:-46504178 None:intergenic
CCTTTGTTAATAAGTTTGAA+GGG 0.539411 1_1:+46502364 Msa0024240:CDS
AGCATCACAAAACAGTCTCA+TGG 0.542742 1_1:+46504114 Msa0024240:CDS
GCCCGACCCGGAACCTGATG+TGG 0.543249 1_1:+46507342 Msa0024240:CDS
CAGAAAGAATGACAATGTAA+AGG 0.547359 1_1:+46507123 Msa0024240:CDS
ATCCACATCAGGTTCCGGGT+CGG 0.548048 1_1:-46507344 None:intergenic
GCTTCTAAGAAATGAGCTGA+TGG 0.549207 1_1:+46508815 Msa0024240:CDS
AGACCAAACCGCATGGGTGA+AGG 0.550828 1_1:+46499367 Msa0024240:CDS
TTGGGGTAGACCAAACCGCA+TGG 0.552422 1_1:+46499360 Msa0024240:CDS
CAACATTGCTGCATGCCCAA+CGG 0.554350 1_1:-46510772 None:intergenic
GTACAGTGAAATTGCAGGAA+TGG 0.556759 1_1:-46511475 Msa0024250:intron
GATGATGGTGCCCGTTATAA+CGG 0.557094 1_1:+46509339 Msa0024240:CDS
GGGATGCAATCCAGAATTTG+AGG 0.559998 1_1:-46511819 Msa0024250:intron
AAGCCAAGCTGTTGAAAACC+AGG 0.562530 1_1:-46499339 None:intergenic
TTGTCCTCGAGCAGTGGTCA+AGG 0.562849 1_1:+46499050 Msa0024240:CDS
TTCTTAGAAGCTCAAAGCGA+AGG 0.563042 1_1:-46508803 None:intergenic
CCTTCCAAATATCGGGAACC+AGG 0.563273 1_1:-46511268 Msa0024250:CDS
GAGGAGGACAGGTTTATGAA+AGG 0.563646 1_1:+46507094 Msa0024240:CDS
CTGGTTCCCGATATTTGGAA+GGG 0.564236 1_1:+46511269 Msa0024240:three_prime_UTR
CTTTCTGGTGCATAAGTGGA+TGG 0.565207 1_1:-46510937 None:intergenic
TCAGAGATATGTACCATCCC+TGG 0.565736 1_1:+46510803 Msa0024240:CDS
CGTTGAGTGGGGTTCAGAAG+AGG 0.568636 1_1:+46502804 Msa0024240:CDS
ATCCTGAGGAGCATCGGGTG+GGG 0.569446 1_1:+46511243 Msa0024240:three_prime_UTR
ATGCCAAGAAAATAGTTGAC+GGG 0.570230 1_1:+46505592 Msa0024240:CDS
ACAACCCCTACATTTGGTGC+AGG 0.572458 1_1:-46508759 None:intergenic
CTTTCGGAATTGAGGAAAGA+CGG 0.573755 1_1:-46511295 Msa0024250:CDS
CATCACACCGGTTGGTGAGG+AGG 0.575965 1_1:+46507078 Msa0024240:CDS
TGATGCCATATTTCTTAGAG+AGG 0.576119 1_1:+46511158 Msa0024240:three_prime_UTR
GCTAGCAGTACAACTAGCAC+AGG 0.576178 1_1:-46503720 None:intergenic
TGGTAGTTTGATGGACATGC+TGG 0.577164 1_1:+46502675 Msa0024240:CDS
AACCATCACACCGGTTGGTG+AGG 0.578656 1_1:+46507075 Msa0024240:CDS
CCCTTCAAACTTATTAACAA+AGG 0.580260 1_1:-46502364 None:intergenic
CATAATGTTTATACCAGGGA+TGG 0.584245 1_1:-46510816 None:intergenic
AAAAGCTGATTCTCTGCAAG+AGG 0.585912 1_1:+46506054 Msa0024240:CDS
GCATCACAAAACAGTCTCAT+GGG 0.587479 1_1:+46504115 Msa0024240:CDS
ATGATGGTATGACTGTCAAC+GGG 0.587846 1_1:+46499153 Msa0024240:CDS
GGATGGTACATATCTCTGAA+TGG 0.588023 1_1:-46510799 None:intergenic
CAACAAGTTGATGGAGTGCA+TGG 0.588754 1_1:+46504375 Msa0024240:CDS
TCAATGTATTTGTTCAAAGG+AGG 0.593230 1_1:+46501670 Msa0024240:CDS
TCTCTGATTAAGCTCTCCAA+GGG 0.594955 1_1:-46502270 None:intergenic
CAATCCTGAGGAGCATCGGG+TGG 0.595880 1_1:+46511241 Msa0024240:three_prime_UTR
TGGGGTAGACCAAACCGCAT+GGG 0.599216 1_1:+46499361 Msa0024240:CDS
AAAGAATGACAATGTAAAGG+TGG 0.599299 1_1:+46507126 Msa0024240:CDS
AATAAACAGGATGTCTTGCA+AGG 0.599328 1_1:+46509685 Msa0024240:intron
AATCCTGAGGAGCATCGGGT+GGG 0.600124 1_1:+46511242 Msa0024240:three_prime_UTR
GATGCCAAGAAAATAGTTGA+CGG 0.600651 1_1:+46505591 Msa0024240:CDS
AGTTTGATGGACATGCTGGT+TGG 0.601484 1_1:+46502679 Msa0024240:CDS
CAGCTGAATTTCTGTCCAGA+GGG 0.602473 1_1:+46504262 Msa0024240:CDS
AAAGAAAACATACAAAGCAA+TGG 0.602552 1_1:-46502406 None:intergenic
AGCTTTATATGATGCAGCCA+GGG 0.604106 1_1:+46499271 Msa0024240:CDS
TCAGTCAACGATAAAAGACT+CGG 0.604277 1_1:+46505629 Msa0024240:CDS
TGCCTACTATTTAGTAAATG+GGG 0.604581 1_1:+46498993 Msa0024240:CDS
AAAATTGAGCTAAAGTCATG+TGG 0.605806 1_1:-46511784 Msa0024250:intron
CTTTGTTAATAAGTTTGAAG+GGG 0.606418 1_1:+46502365 Msa0024240:CDS
GCTTTATTAAATACAGCACA+TGG 0.606466 1_1:+46504214 Msa0024240:CDS
TAAAAGAACCTTAACTGACA+TGG 0.607581 1_1:+46509804 Msa0024240:CDS
GAACTAATGGATGAGAGTTG+TGG 0.607614 1_1:-46503941 None:intergenic
GAAATTGCAGGAATGGCACA+TGG 0.608323 1_1:-46511468 Msa0024250:intron
GTCAAGCTCTAGTTCTGGAA+AGG 0.610770 1_1:+46505946 Msa0024240:CDS
CAGAAAGGTTGGATCTCTTG+AGG 0.611545 1_1:+46510953 Msa0024240:CDS
AAATGGGGCAGTTCAAGAAA+GGG 0.611700 1_1:+46499008 Msa0024240:CDS
AGAAGCATTAAAATGCCGAT+AGG 0.614251 1_1:-46509838 None:intergenic
GAGCGAAATAGAGAAAGGAG+AGG 0.617625 1_1:-46496518 None:intergenic
GCTCTAAAAGCTGCAGCTCG+AGG 0.619043 1_1:-46502778 None:intergenic
AACAGCCTGAAGTGTACGAA+TGG 0.620134 1_1:+46502307 Msa0024240:CDS
TCGGGCTTTCTGGGTATAGG+AGG 0.620870 1_1:-46507325 None:intergenic
CATGATTTGTCCTCGAGCAG+TGG 0.621789 1_1:+46499044 Msa0024240:CDS
GATCAAACCATCACACCGGT+TGG 0.625270 1_1:+46507070 Msa0024240:CDS
CAGTCAACGATAAAAGACTC+GGG 0.627580 1_1:+46505630 Msa0024240:CDS
GACAACATCTGAAAGCATTG+AGG 0.629336 1_1:+46502900 Msa0024240:CDS
TATACCCAGAAAGCCCGACC+CGG 0.629720 1_1:+46507330 Msa0024240:CDS
GATTTGATGATCAGTGATGA+TGG 0.631118 1_1:+46509324 Msa0024240:CDS
GACCATAAATCGTCATCACG+TGG 0.631638 1_1:+46499314 Msa0024240:CDS
GACAGTCATACCATCATCAG+AGG 0.633736 1_1:-46499147 None:intergenic
AGGACCTTGACCACTGCTCG+AGG 0.635154 1_1:-46499054 None:intergenic
TTTAGAGCAAACGTTGAGTG+GGG 0.635179 1_1:+46502793 Msa0024240:CDS
TGATGCTGGAGGTGTTCAGA+TGG 0.637713 1_1:+46509362 Msa0024240:CDS
TTAATGCAGAGATAAGACAT+TGG 0.637829 1_1:+46505563 Msa0024240:intron
CTATCAGTCAGAAAATAATG+AGG 0.638672 1_1:+46508866 Msa0024240:CDS
TACCCGGAGTGCCAGACACG+TGG 0.640012 1_1:-46511204 Msa0024250:CDS
AGGTGATGAATTGACTGAGA+AGG 0.640923 1_1:+46509768 Msa0024240:CDS
GCAGCTGAATTTCTGTCCAG+AGG 0.641446 1_1:+46504261 Msa0024240:CDS
TAGAGAAAGGAGAGGTTGCG+TGG 0.642895 1_1:-46496510 None:intergenic
CACTTGTGGAACCATTCGAA+AGG 0.643702 1_1:-46498944 None:intergenic
GATGATGGTATGACTGTCAA+CGG 0.647798 1_1:+46499152 Msa0024240:CDS
AGCATATAATAAGGAGTACA+CGG 0.648767 1_1:-46501604 None:intergenic
CGTTATAACGGTGATGCTGG+AGG 0.661558 1_1:+46509351 Msa0024240:CDS
GCACTCCGGGTAAACACCAG+TGG 0.663248 1_1:+46511215 Msa0024240:three_prime_UTR
TGGAGTGCATGGATGAACTT+GGG 0.666848 1_1:+46504386 Msa0024240:CDS
TATTACAGGTATCTTATTGG+GGG 0.669200 1_1:+46503902 Msa0024240:intron
CATGGGCATAGTAAACCAGA+AGG 0.671641 1_1:+46504132 Msa0024240:CDS
AATGGCACATGGAATGAAGG+AGG 0.677257 1_1:-46511457 Msa0024250:CDS
AGGAAACTGTGACAAAGACA+AGG 0.691950 1_1:-46511437 Msa0024250:CDS
TGACAATGCCTTCACCCATG+CGG 0.692935 1_1:-46499375 None:intergenic
CACCAGTGGCTACAATCCTG+AGG 0.695000 1_1:+46511229 Msa0024240:three_prime_UTR
CAAACTAAAAGAAACGGGAA+CGG 0.697326 1_1:+46509428 Msa0024240:CDS
ACAGCCTGCACCAAATGTAG+GGG 0.706149 1_1:+46508755 Msa0024240:CDS
TAGTGATCAAACCATCACAC+CGG 0.716684 1_1:+46507066 Msa0024240:CDS
GAAAGAAGCTGAATTCCTGG+AGG 0.720772 1_1:+46506018 Msa0024240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTAAAAATAAATAAAAA+AGG - chr1_1:46505805-46505824 None:intergenic 0.0%
!!! CATTTTTATTTTATTTTTAC+CGG - chr1_1:46497279-46497298 None:intergenic 10.0%
!! ATTGTATAATACAATATTTA+CGG - chr1_1:46497985-46498004 None:intergenic 10.0%
!! TATTAACAAGTATATATTAT+AGG + chr1_1:46498342-46498361 Msa0024240:intron 10.0%
!!! TTTTGTGAAAATAAAAATAT+AGG + chr1_1:46499478-46499497 Msa0024240:intron 10.0%
!!! TTTCAATATTTTAAAATTAC+TGG + chr1_1:46500097-46500116 Msa0024240:intron 10.0%
!!! TATTTGTAGTTTTTTATATT+AGG - chr1_1:46500703-46500722 None:intergenic 10.0%
!! TAGAATTATAATTCTATTAT+TGG - chr1_1:46500750-46500769 None:intergenic 10.0%
!! TTACAAAATATACAAATAAA+TGG - chr1_1:46503460-46503479 None:intergenic 10.0%
!!! TTTCTTATTTATTTTATGTT+AGG + chr1_1:46504350-46504369 Msa0024240:intron 10.0%
!! AAAATAAATAAAAAAGGTTT+GGG - chr1_1:46505799-46505818 None:intergenic 10.0%
!! AAAAATAAATAAAAAAGGTT+TGG - chr1_1:46505800-46505819 None:intergenic 10.0%
!!! TGATTAAAGAAAGTTTTTTT+AGG + chr1_1:46497081-46497100 Msa0024240:intron 15.0%
!! TACATTCCTTAATAATATAA+CGG - chr1_1:46497480-46497499 None:intergenic 15.0%
!! GATTTGAATACTATAAATAT+AGG + chr1_1:46497756-46497775 Msa0024240:intron 15.0%
!!! ATTTATTTGAGTTTATTTTC+TGG + chr1_1:46498416-46498435 Msa0024240:intron 15.0%
!! TAATTAGGAATATTTACAAA+AGG - chr1_1:46500021-46500040 None:intergenic 15.0%
!!! TTACTTTTGTTTGTTAAATT+AGG + chr1_1:46500304-46500323 Msa0024240:intron 15.0%
!!! ATAAATCAAGTTTAGATTTT+AGG - chr1_1:46501393-46501412 None:intergenic 15.0%
!!! AATAAAATACAGATTTTATC+AGG - chr1_1:46501928-46501947 None:intergenic 15.0%
!! AATATACAAATAAATGGAAA+AGG - chr1_1:46503454-46503473 None:intergenic 15.0%
!!! TTTGTATATTTTGTAACAAA+AGG + chr1_1:46503464-46503483 Msa0024240:intron 15.0%
!! TTTATACGATTATTTATTAC+AGG + chr1_1:46503888-46503907 Msa0024240:intron 15.0%
!! CAATAAAAACTATAAATACA+AGG - chr1_1:46505462-46505481 None:intergenic 15.0%
!!! CTTGTATTTATAGTTTTTAT+TGG + chr1_1:46505460-46505479 Msa0024240:intron 15.0%
!! AAATTTAAAAAGATAATAGG+TGG - chr1_1:46505545-46505564 None:intergenic 15.0%
!!! TTTTATATGAGAAAACAAAT+TGG + chr1_1:46506339-46506358 Msa0024240:intron 15.0%
!! ATAAAATTAAAGTAGTCATT+TGG - chr1_1:46506608-46506627 None:intergenic 15.0%
!!! AATTTTATAAATACAATACG+CGG + chr1_1:46506620-46506639 Msa0024240:intron 15.0%
!!! TTTTTTTTCTTTCAAATTAG+TGG + chr1_1:46506886-46506905 Msa0024240:intron 15.0%
!! AAAGTAAAAATATACTTGAT+TGG + chr1_1:46507580-46507599 Msa0024240:intron 15.0%
!!! TTGATTTTATTAGGAAATTT+AGG + chr1_1:46507774-46507793 Msa0024240:intron 15.0%
!!! TGATTTTATTAGGAAATTTA+GGG + chr1_1:46507775-46507794 Msa0024240:intron 15.0%
!!! ACAAATTTGTTTATACTTTA+TGG + chr1_1:46508021-46508040 Msa0024240:intron 15.0%
!! TTCCAAAAATAATCAAATAT+CGG + chr1_1:46508061-46508080 Msa0024240:intron 15.0%
!! GATTAATTATCTATTCTAAT+TGG + chr1_1:46508663-46508682 Msa0024240:intron 15.0%
!!! TAAATGGTAATGAATAAAAA+AGG + chr1_1:46509100-46509119 Msa0024240:intron 15.0%
!!! TTTTTTAGTTTTAAAAGACA+TGG - chr1_1:46509566-46509585 None:intergenic 15.0%
!! AAAAATTAAACAAATCAACA+TGG + chr1_1:46510081-46510100 Msa0024240:intron 15.0%
!! ATCATCATTCAAATATTTAT+AGG - chr1_1:46510560-46510579 None:intergenic 15.0%
!!! TTATTTTTTAAACTCGTATC+CGG - chr1_1:46496786-46496805 None:intergenic 20.0%
!!! CAAAAATTAGATTTTCAGTT+AGG - chr1_1:46496905-46496924 None:intergenic 20.0%
!!! GTTTTACCGTTATATTATTA+AGG + chr1_1:46497471-46497490 Msa0024240:intron 20.0%
!! TTTATAGTATTCAAATCCTA+CGG - chr1_1:46497753-46497772 None:intergenic 20.0%
!!! ATATAGGCAAAATCTTATTT+TGG + chr1_1:46497772-46497791 Msa0024240:intron 20.0%
!!! AGCTAATTAGTTTCAAATAA+CGG - chr1_1:46498298-46498317 None:intergenic 20.0%
!! AAATAGTATGATTGAAATTC+AGG + chr1_1:46498380-46498399 Msa0024240:intron 20.0%
!! GAGCTTATGAAAATAATTTA+TGG + chr1_1:46498466-46498485 Msa0024240:intron 20.0%
!! TTATAACATGTTCATCTAAT+AGG + chr1_1:46498625-46498644 Msa0024240:intron 20.0%
!! TTAATCTGGTTATTTAAACA+GGG + chr1_1:46498793-46498812 Msa0024240:intron 20.0%
!! ATGTAAAACAAAATAGAACA+AGG - chr1_1:46498819-46498838 None:intergenic 20.0%
!!! CTATTTTACATTTTCTAAGA+CGG + chr1_1:46499094-46499113 Msa0024240:CDS 20.0%
!!! TATTTTACATTTTCTAAGAC+GGG + chr1_1:46499095-46499114 Msa0024240:CDS 20.0%
!!! ATTTTTATTTTCACAAAAGC+AGG - chr1_1:46499476-46499495 None:intergenic 20.0%
!! GGTATTATGTATAAAAATCT+CGG - chr1_1:46499705-46499724 None:intergenic 20.0%
!!! TGCTTTTAAATTTTAACAGT+TGG - chr1_1:46499798-46499817 None:intergenic 20.0%
!!! ATACAAATACTGTTTCTTTA+TGG + chr1_1:46499833-46499852 Msa0024240:intron 20.0%
!! GTAAATATTCCTAATTAAGT+TGG + chr1_1:46500024-46500043 Msa0024240:intron 20.0%
!!! ACTTTTTTTGTTTGAAAACT+CGG - chr1_1:46500065-46500084 None:intergenic 20.0%
!!! AGTTTTCAAACAAAAAAAGT+AGG + chr1_1:46500065-46500084 Msa0024240:intron 20.0%
!!! CTTCTTTTAACAAATTTAGA+GGG + chr1_1:46500154-46500173 Msa0024240:intron 20.0%
!!! ATACTAAAGAATTTTTGCTA+TGG + chr1_1:46500190-46500209 Msa0024240:intron 20.0%
!!! TTAGTGTATTGCATATTTTT+AGG + chr1_1:46500274-46500293 Msa0024240:intron 20.0%
!!! TTTGCTAAATTACTTTTCTT+TGG + chr1_1:46500345-46500364 Msa0024240:intron 20.0%
!! ACTTTGGATATTATTACTAT+TGG - chr1_1:46500595-46500614 None:intergenic 20.0%
!!! TTTGTTTCTTTGCTTTATTA+TGG - chr1_1:46500783-46500802 None:intergenic 20.0%
!! TAAAAAAAGCTTCAAAACAA+AGG - chr1_1:46501263-46501282 None:intergenic 20.0%
!! CTTTACAAATCATATTCATT+TGG - chr1_1:46501433-46501452 None:intergenic 20.0%
!! ATTCATTAATGATGAAGAAT+AGG - chr1_1:46501477-46501496 None:intergenic 20.0%
!!! CTTCATCATTAATGAATTTT+TGG + chr1_1:46501480-46501499 Msa0024240:intron 20.0%
!!! ACAGTTTATTAATTTTTCTC+AGG + chr1_1:46501578-46501597 Msa0024240:intron 20.0%
!! AGAATGAAATAGAAATTCTT+CGG + chr1_1:46501746-46501765 Msa0024240:intron 20.0%
!! AATTATCTGATGAATAGTTT+CGG - chr1_1:46501808-46501827 None:intergenic 20.0%
!! TAAAACTAAAGATGTAAAGA+AGG - chr1_1:46502165-46502184 None:intergenic 20.0%
!! TCAAGCTTATAATTCTATAA+AGG + chr1_1:46502717-46502736 Msa0024240:CDS 20.0%
!! TATAATTCTATAAAGGATGT+TGG + chr1_1:46502724-46502743 Msa0024240:CDS 20.0%
!! TAAAAAAATTATACAGTCAC+AGG - chr1_1:46503115-46503134 None:intergenic 20.0%
!! TTCTATCATAAACCATATTT+CGG - chr1_1:46503164-46503183 None:intergenic 20.0%
!! TGGTTTATGATAGAATATTA+TGG + chr1_1:46503169-46503188 Msa0024240:intron 20.0%
!!! TTGTATATATAGGTGTTTTA+AGG + chr1_1:46503757-46503776 Msa0024240:CDS 20.0%
!! ATAAATGCACAAAAATTCAT+AGG - chr1_1:46503865-46503884 None:intergenic 20.0%
!! ATTTATTACAGGTATCTTAT+TGG + chr1_1:46503899-46503918 Msa0024240:intron 20.0%
!! TTTATTACAGGTATCTTATT+GGG + chr1_1:46503900-46503919 Msa0024240:intron 20.0%
!! ATACAATTGATATGAACTAA+TGG - chr1_1:46503957-46503976 None:intergenic 20.0%
!!! ATTATTAAGCTGATTTAACT+GGG + chr1_1:46504023-46504042 Msa0024240:intron 20.0%
!!! TAATTTATTAATTTTGCAGC+TGG - chr1_1:46504328-46504347 None:intergenic 20.0%
!!! CATCAAAACATTACATTTTT+GGG + chr1_1:46504503-46504522 Msa0024240:intron 20.0%
!!! ATCAAAACATTACATTTTTG+GGG + chr1_1:46504504-46504523 Msa0024240:intron 20.0%
!! TACAAGGTGTATAAATAAAT+AGG - chr1_1:46505446-46505465 None:intergenic 20.0%
!!! AAATTCAGATTTTAAAGTGT+GGG - chr1_1:46505677-46505696 None:intergenic 20.0%
!!! TAAATTCAGATTTTAAAGTG+TGG - chr1_1:46505678-46505697 None:intergenic 20.0%
!! TGAAATCAAATGTCAAAAAA+AGG - chr1_1:46505863-46505882 None:intergenic 20.0%
!!! TTTTTTTGACATTTGATTTC+AGG + chr1_1:46505862-46505881 Msa0024240:intron 20.0%
!!! TTTGTTTTCTCATATAAAAG+AGG - chr1_1:46506338-46506357 None:intergenic 20.0%
!!! ATAACTTTAATTGCCATTTA+GGG - chr1_1:46506366-46506385 None:intergenic 20.0%
!!! TATAACTTTAATTGCCATTT+AGG - chr1_1:46506367-46506386 None:intergenic 20.0%
!!! TTTAGGTAAATGTAATTTTC+TGG + chr1_1:46507220-46507239 Msa0024240:intron 20.0%
!! ATGTATTAACATAAGATGTT+TGG + chr1_1:46507470-46507489 Msa0024240:intron 20.0%
!! TGTATTAACATAAGATGTTT+GGG + chr1_1:46507471-46507490 Msa0024240:intron 20.0%
!! TCATATATGTTCTTCAATAA+TGG + chr1_1:46507519-46507538 Msa0024240:intron 20.0%
!! AATTTAGAAATGACTATGAT+TGG - chr1_1:46507554-46507573 None:intergenic 20.0%
!! GAGAAAGTTGAAAAATATTA+GGG - chr1_1:46507821-46507840 None:intergenic 20.0%
!! AGAGAAAGTTGAAAAATATT+AGG - chr1_1:46507822-46507841 None:intergenic 20.0%
!!! TACAGATTATTTTGATAGAA+GGG + chr1_1:46508346-46508365 Msa0024240:intron 20.0%
!! TTTATTCATTACCATTTACT+AGG - chr1_1:46509098-46509117 None:intergenic 20.0%
!! TGTTGTAAATAGCATTTATT+AGG - chr1_1:46509189-46509208 None:intergenic 20.0%
!!! TTTTGACAAACTAAAAGAAA+CGG + chr1_1:46509422-46509441 Msa0024240:CDS 20.0%
!! ATTGATAAGAACAATCATAA+AGG - chr1_1:46509880-46509899 None:intergenic 20.0%
!!! ATTTAAAATCTTAAACTGCT+TGG + chr1_1:46510469-46510488 Msa0024240:intron 20.0%
!! AAACATCTTATATTGGAAAA+TGG - chr1_1:46510712-46510731 None:intergenic 20.0%
!! TAGTAAGAAACATCTTATAT+TGG - chr1_1:46510719-46510738 None:intergenic 20.0%
!! TTTGTTAGCTATACATAAAT+CGG - chr1_1:46511069-46511088 None:intergenic 20.0%
!! GATATAAATACGTTGTAATA+CGG + chr1_1:46511379-46511398 Msa0024240:three_prime_UTR 20.0%
!!! TATCCAAATATACTTTTGAA+AGG + chr1_1:46511505-46511524 Msa0024240:three_prime_UTR 20.0%
!!! ATGACATACTTTTAGTTTTA+AGG + chr1_1:46511562-46511581 Msa0024240:three_prime_UTR 20.0%
!!! ATGATGCATTGTTTTTTTGT+AGG + chr1_1:46496994-46497013 Msa0024240:intron 25.0%
!!! TGTTTTTTTGTAGGTAATTC+AGG + chr1_1:46497003-46497022 Msa0024240:intron 25.0%
! TTTCTTTAATCATATACTCG+TGG - chr1_1:46497073-46497092 None:intergenic 25.0%
! GAAATATCAAATCAACTTGT+TGG + chr1_1:46497121-46497140 Msa0024240:intron 25.0%
! ATAAATTCCGTCAGTAAAAT+AGG + chr1_1:46497223-46497242 Msa0024240:intron 25.0%
!!! TTTTATTTTTACCGGAGATT+GGG - chr1_1:46497271-46497290 None:intergenic 25.0%
!!! ATTTTATTTTTACCGGAGAT+TGG - chr1_1:46497272-46497291 None:intergenic 25.0%
! TTTCCAACTAATTCAACTAA+CGG - chr1_1:46497318-46497337 None:intergenic 25.0%
! AGTTGGAAATGATAACAAAA+TGG + chr1_1:46497329-46497348 Msa0024240:intron 25.0%
! GTTGGAAATGATAACAAAAT+GGG + chr1_1:46497330-46497349 Msa0024240:intron 25.0%
! ATTCTCAATCTAAGAAGAAT+GGG + chr1_1:46497393-46497412 Msa0024240:intron 25.0%
! AATAATATAACGGTAAAACG+CGG - chr1_1:46497470-46497489 None:intergenic 25.0%
!!! GTATTTCAAGTGTGATTTTA+TGG + chr1_1:46498049-46498068 Msa0024240:intron 25.0%
! GTTAATCTGGTTATTTAAAC+AGG + chr1_1:46498792-46498811 Msa0024240:intron 25.0%
! ATTGCCTACTATTTAGTAAA+TGG + chr1_1:46498991-46499010 Msa0024240:CDS 25.0%
! TTGCCTACTATTTAGTAAAT+GGG + chr1_1:46498992-46499011 Msa0024240:CDS 25.0%
!! GCTTCTTTTAACAAATTTAG+AGG + chr1_1:46500153-46500172 Msa0024240:intron 25.0%
!! GTTTGTTAAATTAGGTCATT+TGG + chr1_1:46500312-46500331 Msa0024240:intron 25.0%
! GAAAAGTAATTTAGCAAAGA+AGG - chr1_1:46500343-46500362 None:intergenic 25.0%
! TAGAGAGAATAATAGGTTAA+GGG - chr1_1:46500533-46500552 None:intergenic 25.0%
! TTAGAGAGAATAATAGGTTA+AGG - chr1_1:46500534-46500553 None:intergenic 25.0%
! TAGAAGTTAGAGAGAATAAT+AGG - chr1_1:46500540-46500559 None:intergenic 25.0%
! GTGAAAAAATTATGAGTGAA+GGG + chr1_1:46500825-46500844 Msa0024240:intron 25.0%
!! TTTCTTAAATTTTGCAGGTT+AGG - chr1_1:46501549-46501568 None:intergenic 25.0%
!! CAGTTTTTCTTAAATTTTGC+AGG - chr1_1:46501554-46501573 None:intergenic 25.0%
! ATGTCAATGTATTTGTTCAA+AGG + chr1_1:46501667-46501686 Msa0024240:CDS 25.0%
! CTATTATAAAACTTCACACA+GGG - chr1_1:46501776-46501795 None:intergenic 25.0%
! TCTATTATAAAACTTCACAC+AGG - chr1_1:46501777-46501796 None:intergenic 25.0%
! ATTATCTGATGAATAGTTTC+GGG - chr1_1:46501807-46501826 None:intergenic 25.0%
! AAATATATTTCGCATAGCTA+TGG + chr1_1:46501856-46501875 Msa0024240:intron 25.0%
! AAAGTTTAAATCTATGACTC+AGG + chr1_1:46501969-46501988 Msa0024240:intron 25.0%
! TCCTTTGTTAATAAGTTTGA+AGG + chr1_1:46502363-46502382 Msa0024240:CDS 25.0%
! CCTTTGTTAATAAGTTTGAA+GGG + chr1_1:46502364-46502383 Msa0024240:CDS 25.0%
! CTTTGTTAATAAGTTTGAAG+GGG + chr1_1:46502365-46502384 Msa0024240:CDS 25.0%
! AAAGAAAACATACAAAGCAA+TGG - chr1_1:46502409-46502428 None:intergenic 25.0%
! CGTCTATTAATATAACATGA+AGG - chr1_1:46502481-46502500 None:intergenic 25.0%
!! AGAGAATTTCTTGTACATTT+TGG + chr1_1:46502754-46502773 Msa0024240:CDS 25.0%
! CTATTGATAAGGAGAAAATA+TGG + chr1_1:46502869-46502888 Msa0024240:CDS 25.0%
!! AACAAAGTATAGCTTTACTT+TGG - chr1_1:46503039-46503058 None:intergenic 25.0%
! AAAATTCTTATTCATTCACG+TGG + chr1_1:46503076-46503095 Msa0024240:intron 25.0%
!!! AATGATTTTTTTTTCCAGCA+TGG + chr1_1:46503306-46503325 Msa0024240:intron 25.0%
! TTTGGATTCTTTATTGCTTT+AGG + chr1_1:46503538-46503557 Msa0024240:CDS 25.0%
!! ATTACTATTGTTAGAGTACT+AGG + chr1_1:46503654-46503673 Msa0024240:intron 25.0%
! ACAAGACATTATGATGATAA+AGG - chr1_1:46503835-46503854 None:intergenic 25.0%
! TTATTACAGGTATCTTATTG+GGG + chr1_1:46503901-46503920 Msa0024240:intron 25.0%
! TTCATATCAATTGTATGTTG+AGG + chr1_1:46503961-46503980 Msa0024240:CDS 25.0%
! TATGTTGAGGTTAGTATTTA+TGG + chr1_1:46503974-46503993 Msa0024240:intron 25.0%
!! GATTATTAAGCTGATTTAAC+TGG + chr1_1:46504022-46504041 Msa0024240:intron 25.0%
!! TTATTAAGCTGATTTAACTG+GGG + chr1_1:46504024-46504043 Msa0024240:intron 25.0%
!! GCATCAAAACATTACATTTT+TGG + chr1_1:46504502-46504521 Msa0024240:intron 25.0%
! ACTACAGCCATTATATAAAA+CGG - chr1_1:46504677-46504696 None:intergenic 25.0%
! TAGTTGTTCACAAAAAGAAT+TGG + chr1_1:46504794-46504813 Msa0024240:intron 25.0%
!!! TCTTAATGTGGTTTTAAATG+TGG + chr1_1:46504847-46504866 Msa0024240:intron 25.0%
!!! CTTAATGTGGTTTTAAATGT+GGG + chr1_1:46504848-46504867 Msa0024240:intron 25.0%
! TAAAGAAAGTAAATGACACA+TGG + chr1_1:46504999-46505018 Msa0024240:intron 25.0%
!!! TCTTTCTTTTCTAGAGAATT+GGG - chr1_1:46505293-46505312 None:intergenic 25.0%
!!! TTCTTTCTTTTCTAGAGAAT+TGG - chr1_1:46505294-46505313 None:intergenic 25.0%
! TAAACGCATTTCAATTAGAT+TGG - chr1_1:46505320-46505339 None:intergenic 25.0%
!! AAAAATGTTTTCACAAGATC+TGG - chr1_1:46505490-46505509 None:intergenic 25.0%
! GAAATAATACACTACTGAAA+TGG - chr1_1:46505720-46505739 None:intergenic 25.0%
! TGAAGAATATTGATACGTTA+AGG - chr1_1:46505762-46505781 None:intergenic 25.0%
!! AAAGACTTTTACCTCTTTTT+CGG + chr1_1:46506142-46506161 Msa0024240:intron 25.0%
! TTTATCAACAAACACAATTC+AGG - chr1_1:46506191-46506210 None:intergenic 25.0%
!! TAACTTTAATTGCCATTTAG+GGG - chr1_1:46506365-46506384 None:intergenic 25.0%
! CTAATTACTAGTACCAAAAT+GGG - chr1_1:46506457-46506476 None:intergenic 25.0%
! TCTAATTACTAGTACCAAAA+TGG - chr1_1:46506458-46506477 None:intergenic 25.0%
! TAATTAGAAACCAAAACGAT+GGG + chr1_1:46506470-46506489 Msa0024240:intron 25.0%
! TACTCTATTACAGGTTATTT+GGG - chr1_1:46506573-46506592 None:intergenic 25.0%
! AATAATCATATGCAGTACTT+TGG + chr1_1:46506678-46506697 Msa0024240:intron 25.0%
! TTTAAGCAAAGACATAAAAC+TGG - chr1_1:46506778-46506797 None:intergenic 25.0%
! TTAAAAGTCTTGGTGAAAAT+TGG + chr1_1:46506793-46506812 Msa0024240:intron 25.0%
! TAAAAGTCTTGGTGAAAATT+GGG + chr1_1:46506794-46506813 Msa0024240:intron 25.0%
!! TTTTCACAAAAGATACGAAA+AGG - chr1_1:46507415-46507434 None:intergenic 25.0%
! GTAAAAATATACTTGATTGG+TGG + chr1_1:46507583-46507602 Msa0024240:intron 25.0%
!!! AGCTGCTATTTGATTTTATT+AGG + chr1_1:46507765-46507784 Msa0024240:intron 25.0%
!! CACCGATATTTGATTATTTT+TGG - chr1_1:46508066-46508085 None:intergenic 25.0%
! GACACAACTAAGATTATATT+TGG + chr1_1:46508169-46508188 Msa0024240:intron 25.0%
!!! ACATCTAGTCACTTTTTTAA+AGG - chr1_1:46508230-46508249 None:intergenic 25.0%
!!! CTACAGATTATTTTGATAGA+AGG + chr1_1:46508345-46508364 Msa0024240:intron 25.0%
! TCTTTATAGATTCTTGAGAT+AGG - chr1_1:46508390-46508409 None:intergenic 25.0%
!!! TCTTTGAGTTTTGAGTATTA+TGG + chr1_1:46508698-46508717 Msa0024240:intron 25.0%
! CATGACATTATGTAATTATC+AGG - chr1_1:46509140-46509159 None:intergenic 25.0%
! CTGATAATTACATAATGTCA+TGG + chr1_1:46509138-46509157 Msa0024240:intron 25.0%
! TTTGACAAACTAAAAGAAAC+GGG + chr1_1:46509423-46509442 Msa0024240:CDS 25.0%
!!! GTTTTAAAAGACATGGAATA+GGG - chr1_1:46509559-46509578 None:intergenic 25.0%
!!! AGTTTTAAAAGACATGGAAT+AGG - chr1_1:46509560-46509579 None:intergenic 25.0%
! ATAAGGAGCAGAAAAATTAA+AGG - chr1_1:46510597-46510616 None:intergenic 25.0%
! GTTCCACTTCAATATTTATA+AGG - chr1_1:46510614-46510633 None:intergenic 25.0%
! AATATTGAAGTGGAACAAAA+TGG + chr1_1:46510618-46510637 Msa0024240:intron 25.0%
! TAAGATGTTTCTTACTAAGA+AGG + chr1_1:46510722-46510741 Msa0024240:intron 25.0%
! AAGTCATAATGTTTATACCA+GGG - chr1_1:46510823-46510842 None:intergenic 25.0%
! AAAGTCATAATGTTTATACC+AGG - chr1_1:46510824-46510843 None:intergenic 25.0%
! TTTGAACATCACATATCTTT+CGG - chr1_1:46511314-46511333 Msa0024250:CDS 25.0%
!! CATCCTTTCAAAAGTATATT+TGG - chr1_1:46511511-46511530 Msa0024250:intron 25.0%
!!! TTTTGAAAGGATGACTAAAA+TGG + chr1_1:46511518-46511537 Msa0024240:three_prime_UTR 25.0%
! TTTGAAAGGATGACTAAAAT+GGG + chr1_1:46511519-46511538 Msa0024240:three_prime_UTR 25.0%
CAAATTCTTCAATCGTTACA+TGG + chr1_1:46496598-46496617 Msa0024240:exon 30.0%
CCTTAACGGAAGAAAATTAT+TGG - chr1_1:46496642-46496661 None:intergenic 30.0%
! CCAATAATTTTCTTCCGTTA+AGG + chr1_1:46496639-46496658 Msa0024240:CDS 30.0%
! GAGAAATGGATTTACCTTAA+CGG - chr1_1:46496656-46496675 None:intergenic 30.0%
ATTGAAGCTAAAACAGTTGT+TGG - chr1_1:46496718-46496737 None:intergenic 30.0%
!!! ACAACTGTTTTAGCTTCAAT+TGG + chr1_1:46496718-46496737 Msa0024240:intron 30.0%
!!! GAAAGTTTTTTTAGGTCAAG+AGG + chr1_1:46497089-46497108 Msa0024240:intron 30.0%
!! TATCAAATCAACTTGTTGGT+TGG + chr1_1:46497125-46497144 Msa0024240:intron 30.0%
! TATAGGACCTATTTTACTGA+CGG - chr1_1:46497233-46497252 None:intergenic 30.0%
GAAATGATAACAAAATGGGT+AGG + chr1_1:46497334-46497353 Msa0024240:intron 30.0%
CATTCTCAATCTAAGAAGAA+TGG + chr1_1:46497392-46497411 Msa0024240:intron 30.0%
TTCTCAATCTAAGAAGAATG+GGG + chr1_1:46497394-46497413 Msa0024240:intron 30.0%
ATAATATAACGGTAAAACGC+GGG - chr1_1:46497469-46497488 None:intergenic 30.0%
!!! TAGGCAAAATCTTATTTTGG+TGG + chr1_1:46497775-46497794 Msa0024240:intron 30.0%
CGATACTATGATTATGATTG+CGG + chr1_1:46497827-46497846 Msa0024240:intron 30.0%
! GATTTTACGATGATTACGAT+TGG - chr1_1:46498207-46498226 None:intergenic 30.0%
TAAGCATTTATGAGACTCTT+TGG + chr1_1:46498441-46498460 Msa0024240:intron 30.0%
AAGCATTTATGAGACTCTTT+GGG + chr1_1:46498442-46498461 Msa0024240:intron 30.0%
TTATGACATGTTCATGACAA+AGG + chr1_1:46498554-46498573 Msa0024240:intron 30.0%
!!! AACTTATTTTTACAAGCTCC+AGG + chr1_1:46498585-46498604 Msa0024240:intron 30.0%
!!! ACTTATTTTTACAAGCTCCA+GGG + chr1_1:46498586-46498605 Msa0024240:intron 30.0%
TATAGAAAAACTAAGCTCAG+AGG - chr1_1:46498857-46498876 None:intergenic 30.0%
TGCCTACTATTTAGTAAATG+GGG + chr1_1:46498993-46499012 Msa0024240:CDS 30.0%
AGGACAAATCATGTTGAATA+AGG - chr1_1:46499037-46499056 None:intergenic 30.0%
TGCTAACCTTGAAAAAATGA+GGG + chr1_1:46499196-46499215 Msa0024240:CDS 30.0%
!!! ATTTCACCCTCATTTTTTCA+AGG - chr1_1:46499205-46499224 None:intergenic 30.0%
! GAAGATGAAGACTTTTATGA+TGG + chr1_1:46499239-46499258 Msa0024240:CDS 30.0%
!!! TTTTGTTTTACATGCCTTGT+TGG + chr1_1:46499600-46499619 Msa0024240:intron 30.0%
GTTTCTTTATGGTAACTGAA+AGG + chr1_1:46499844-46499863 Msa0024240:intron 30.0%
AAGCAATAATGTCAATCTGT+TGG - chr1_1:46500137-46500156 None:intergenic 30.0%
AGTTATTAAATGTCCAGCTT+GGG + chr1_1:46500246-46500265 Msa0024240:intron 30.0%
!!! ACTTTTGAGTTTGACAACTT+TGG - chr1_1:46500611-46500630 None:intergenic 30.0%
! TCTTTGCTTTATTATGGAGT+TGG - chr1_1:46500777-46500796 None:intergenic 30.0%
CCAGATAAAAAACAAACCAA+CGG + chr1_1:46500803-46500822 Msa0024240:intron 30.0%
!!! ACTCATAATTTTTTCACCGT+TGG - chr1_1:46500822-46500841 None:intergenic 30.0%
GGTGAAAAAATTATGAGTGA+AGG + chr1_1:46500824-46500843 Msa0024240:intron 30.0%
AAAAATTATGAGTGAAGGGA+AGG + chr1_1:46500829-46500848 Msa0024240:intron 30.0%
CAATAAAAGAACTGTGATAC+TGG + chr1_1:46500906-46500925 Msa0024240:intron 30.0%
ATACTGGTATCTATTTGAGT+GGG + chr1_1:46500922-46500941 Msa0024240:intron 30.0%
GGAAAAATAAACAAAGCAGA+GGG + chr1_1:46500962-46500981 Msa0024240:intron 30.0%
GTTCTCTTCATTTATACTAG+GGG - chr1_1:46501164-46501183 None:intergenic 30.0%
CGTTCTCTTCATTTATACTA+GGG - chr1_1:46501165-46501184 None:intergenic 30.0%
TCGTTCTCTTCATTTATACT+AGG - chr1_1:46501166-46501185 None:intergenic 30.0%
!! AGATTTTAGGTAGCCAAATA+TGG - chr1_1:46501380-46501399 None:intergenic 30.0%
AATAGTGAGATATGATCAAC+TGG - chr1_1:46501525-46501544 None:intergenic 30.0%
! AGCATATAATAAGGAGTACA+CGG - chr1_1:46501607-46501626 None:intergenic 30.0%
TTCACTTGCAGCATATAATA+AGG - chr1_1:46501616-46501635 None:intergenic 30.0%
TCAATGTATTTGTTCAAAGG+AGG + chr1_1:46501670-46501689 Msa0024240:CDS 30.0%
AAATCTATGACTCAGGTTTA+AGG + chr1_1:46501976-46501995 Msa0024240:intron 30.0%
TTGTGTTGTACCCTTAATAT+GGG + chr1_1:46502006-46502025 Msa0024240:intron 30.0%
TAAGTATACAATCACTGTGA+TGG - chr1_1:46502070-46502089 None:intergenic 30.0%
AATACGAGCGAATCAAATAT+TGG - chr1_1:46502113-46502132 None:intergenic 30.0%
AACTTGTGTAAATGTTGCAT+TGG + chr1_1:46502223-46502242 Msa0024240:intron 30.0%
CCCTTCAAACTTATTAACAA+AGG - chr1_1:46502367-46502386 None:intergenic 30.0%
!! ATATTTTTGACTGAATTCCC+AGG + chr1_1:46502512-46502531 Msa0024240:intron 30.0%
GAATTATAAGCTTGACTTAC+AGG - chr1_1:46502712-46502731 None:intergenic 30.0%
!! TTCAGAAGAGGTTATTTTCT+GGG + chr1_1:46502816-46502835 Msa0024240:CDS 30.0%
! TAATGAGTTGAACCGAAATA+TGG + chr1_1:46503149-46503168 Msa0024240:intron 30.0%
! GTTGTTGTTGTATTGACATT+TGG + chr1_1:46503251-46503270 Msa0024240:intron 30.0%
AAATCATTTCTATCCCTAGT+GGG - chr1_1:46503294-46503313 None:intergenic 30.0%
AAAATCATTTCTATCCCTAG+TGG - chr1_1:46503295-46503314 None:intergenic 30.0%
! AAGTACACGAACATTTCTTT+TGG + chr1_1:46503564-46503583 Msa0024240:CDS 30.0%
AAATCTTCAATTGGATCATC+GGG - chr1_1:46503607-46503626 None:intergenic 30.0%
GAAATCTTCAATTGGATCAT+CGG - chr1_1:46503608-46503627 None:intergenic 30.0%
ATCCAATTGAAGATTTCATC+AGG + chr1_1:46503611-46503630 Msa0024240:CDS 30.0%
TACCTGATGAAATCTTCAAT+TGG - chr1_1:46503616-46503635 None:intergenic 30.0%
!!! GTCATGAATAGTTTTTGGTT+AGG + chr1_1:46503697-46503716 Msa0024240:intron 30.0%
GGTCAGATGATTGTATATAT+AGG + chr1_1:46503747-46503766 Msa0024240:CDS 30.0%
TATTACAGGTATCTTATTGG+GGG + chr1_1:46503902-46503921 Msa0024240:intron 30.0%
! GCTTTATTAAATACAGCACA+TGG + chr1_1:46504214-46504233 Msa0024240:CDS 30.0%
! TTTATTAATTTTGCAGCTGG+TGG - chr1_1:46504325-46504344 None:intergenic 30.0%
AATGCAAAAAAGACTGTAGA+TGG - chr1_1:46504441-46504460 None:intergenic 30.0%
!!! AGTCTTTTTTGCATTCCATT+AGG + chr1_1:46504446-46504465 Msa0024240:intron 30.0%
!!! ATGTTTTGATGCATGAATCA+TGG - chr1_1:46504494-46504513 None:intergenic 30.0%
TTGTTCACAAAAAGAATTGG+AGG + chr1_1:46504797-46504816 Msa0024240:intron 30.0%
TAGAAGCTAAAGTAAAGTTG+AGG - chr1_1:46504879-46504898 None:intergenic 30.0%
! TTTATCCTACAAAGCTCTTT+TGG + chr1_1:46504946-46504965 Msa0024240:intron 30.0%
TTCTTTCTACGGAATAATCA+CGG + chr1_1:46504976-46504995 Msa0024240:intron 30.0%
!! AAGATGGATTGAAGACAAAA+TGG + chr1_1:46505033-46505052 Msa0024240:intron 30.0%
! AACTTAGAGGTTGATCAAAA+CGG + chr1_1:46505189-46505208 Msa0024240:intron 30.0%
TGATTGGAATTAGAAACTCT+TGG - chr1_1:46505517-46505536 None:intergenic 30.0%
TTAATGCAGAGATAAGACAT+TGG + chr1_1:46505563-46505582 Msa0024240:intron 30.0%
!! TTTTATCGTTGACTGAATTG+TGG - chr1_1:46505625-46505644 None:intergenic 30.0%
!!! TATTTTTTCCAAGTCAGAAC+AGG - chr1_1:46505987-46506006 None:intergenic 30.0%
!! GTTCTGACTTGGAAAAAATA+CGG + chr1_1:46505987-46506006 Msa0024240:CDS 30.0%
ATTATACCAGGAATTGGTAA+AGG - chr1_1:46506114-46506133 None:intergenic 30.0%
ATTGACTGATCAACATAACA+GGG + chr1_1:46506216-46506235 Msa0024240:intron 30.0%
AACCAGATAATAATCAGTGA+TGG + chr1_1:46506243-46506262 Msa0024240:intron 30.0%
ACCAGATAATAATCAGTGAT+GGG + chr1_1:46506244-46506263 Msa0024240:intron 30.0%
TTGTCGACGAAAGATTAATT+TGG + chr1_1:46506392-46506411 Msa0024240:intron 30.0%
GTAATTAGAAACCAAAACGA+TGG + chr1_1:46506469-46506488 Msa0024240:intron 30.0%
! ATGGGAAGTATATGTTTGAA+AGG + chr1_1:46506488-46506507 Msa0024240:intron 30.0%
CTACTCTATTACAGGTTATT+TGG - chr1_1:46506574-46506593 None:intergenic 30.0%
GTAGTCATTTGGTTAATAAG+CGG - chr1_1:46506597-46506616 None:intergenic 30.0%
TTTATAAATACAATACGCGG+TGG + chr1_1:46506623-46506642 Msa0024240:intron 30.0%
TATTCTTCACATACATACTC+TGG - chr1_1:46506662-46506681 None:intergenic 30.0%
!! GTACTTTGGAGTAAAATATG+AGG + chr1_1:46506692-46506711 Msa0024240:intron 30.0%
TGGAGTAAAATATGAGGATT+AGG + chr1_1:46506698-46506717 Msa0024240:intron 30.0%
AAGAAGGCAAAATCTATGTT+CGG - chr1_1:46506752-46506771 None:intergenic 30.0%
ATGTCTTTGCTTAAAAGTCT+TGG + chr1_1:46506783-46506802 Msa0024240:intron 30.0%
TACAAGTTTAGTAGTATGCA+TGG + chr1_1:46506817-46506836 Msa0024240:intron 30.0%
!!! TTGTTGTTTGCTTTTTTCCA+TGG + chr1_1:46506843-46506862 Msa0024240:intron 30.0%
CAGAAAGAATGACAATGTAA+AGG + chr1_1:46507123-46507142 Msa0024240:CDS 30.0%
AAAGAATGACAATGTAAAGG+TGG + chr1_1:46507126-46507145 Msa0024240:CDS 30.0%
AAACAGAAGAAAGTAGTAGT+TGG - chr1_1:46507202-46507221 None:intergenic 30.0%
! CTACTACTTTCTTCTGTTTT+AGG + chr1_1:46507203-46507222 Msa0024240:intron 30.0%
!!! TGTGTCTTTTTCAGACAAAT+TGG + chr1_1:46507271-46507290 Msa0024240:intron 30.0%
ATCAACATCATCAAATGATG+AGG - chr1_1:46507390-46507409 None:intergenic 30.0%
!! AGGAAATTTAGGGTATTTTG+AGG + chr1_1:46507785-46507804 Msa0024240:intron 30.0%
CTCTTCTATCTTCTATCTTA+TGG + chr1_1:46507867-46507886 Msa0024240:intron 30.0%
!!! TGTTCCTGTCTTTTGTTTTT+TGG + chr1_1:46507916-46507935 Msa0024240:intron 30.0%
AACACCAAAAAACAAAAGAC+AGG - chr1_1:46507923-46507942 None:intergenic 30.0%
TATACCAGTATGACAAATAG+CGG - chr1_1:46508090-46508109 None:intergenic 30.0%
!! GTATATGCTATTTCACCTTT+GGG + chr1_1:46508105-46508124 Msa0024240:intron 30.0%
!! TATATGCTATTTCACCTTTG+GGG + chr1_1:46508106-46508125 Msa0024240:intron 30.0%
!! TTGGTTTTCAGTATAGTTGT+AGG + chr1_1:46508188-46508207 Msa0024240:intron 30.0%
! TCTTGAGATAGGTTTTTGTT+AGG - chr1_1:46508379-46508398 None:intergenic 30.0%
! CTCACTTGCAAATAAGTTTT+TGG - chr1_1:46508531-46508550 None:intergenic 30.0%
TTTGCAAGTGAGAATTCTAT+AGG + chr1_1:46508539-46508558 Msa0024240:intron 30.0%
CCAGTTTAAGCATGATTATT+AGG - chr1_1:46508606-46508625 None:intergenic 30.0%
CCTAATAATCATGCTTAAAC+TGG + chr1_1:46508603-46508622 Msa0024240:intron 30.0%
! CTCATTATTTTCTGACTGAT+AGG - chr1_1:46508868-46508887 None:intergenic 30.0%
CTATCAGTCAGAAAATAATG+AGG + chr1_1:46508866-46508885 Msa0024240:CDS 30.0%
TTTGAATTAGACTACTCACA+AGG + chr1_1:46508902-46508921 Msa0024240:intron 30.0%
GACTTTATGTTACAAACTAG+AGG + chr1_1:46509042-46509061 Msa0024240:intron 30.0%
TTACTAGGATTCATGTACAA+TGG - chr1_1:46509083-46509102 None:intergenic 30.0%
TGTACATGAATCCTAGTAAA+TGG + chr1_1:46509084-46509103 Msa0024240:intron 30.0%
GCTAAAGTAGTCAATACAAA+TGG - chr1_1:46509254-46509273 None:intergenic 30.0%
! GTCTGACATTTTTCTTTGTT+TGG + chr1_1:46509460-46509479 Msa0024240:intron 30.0%
! AAGTCTGCTACTTAATAAAC+AGG + chr1_1:46509672-46509691 Msa0024240:intron 30.0%
TAAAAGAACCTTAACTGACA+TGG + chr1_1:46509804-46509823 Msa0024240:CDS 30.0%
!!! CAATTTTGATTTGCCAACTT+AGG - chr1_1:46510058-46510077 None:intergenic 30.0%
AATCTCATCCTTATATCTAG+TGG - chr1_1:46510389-46510408 None:intergenic 30.0%
GATATAAGGATGAGATTGTA+AGG + chr1_1:46510392-46510411 Msa0024240:intron 30.0%
GCTCCTTATAAATATTGAAG+TGG + chr1_1:46510608-46510627 Msa0024240:intron 30.0%
! TTCTCTCGTTTACATTTTCT+AGG - chr1_1:46510652-46510671 None:intergenic 30.0%
TGTAGATTCAGATGATGAAA+TGG + chr1_1:46511017-46511036 Msa0024240:CDS 30.0%
ATGGATGAAGTTAAATGATC+AGG + chr1_1:46511036-46511055 Msa0024240:exon 30.0%
ACAAAACTTAACATTCTTCC+TGG + chr1_1:46511084-46511103 Msa0024240:three_prime_UTR 30.0%
ATATTTCTTAGAGAGGAGTT+GGG + chr1_1:46511165-46511184 Msa0024240:three_prime_UTR 30.0%
GTTGTAAAAGAGATGCAATA+TGG - chr1_1:46511355-46511374 Msa0024250:CDS 30.0%
AAAATTGAGCTAAAGTCATG+TGG - chr1_1:46511787-46511806 Msa0024250:intron 30.0%
GTTTAAACTTCCTCAAATTC+TGG + chr1_1:46511809-46511828 Msa0024240:three_prime_UTR 30.0%
GAAAAGAGCGAAATAGAGAA+AGG - chr1_1:46496526-46496545 None:intergenic 35.0%
AAAGCAGAAGGATAGAGAAA+TGG - chr1_1:46496670-46496689 None:intergenic 35.0%
ATCATTGACATGTAGATGCT+AGG + chr1_1:46496811-46496830 Msa0024240:intron 35.0%
AGGCACTCAAAAATCAAAAC+TGG - chr1_1:46497050-46497069 None:intergenic 35.0%
CTTTAATCATATACTCGTGG+AGG - chr1_1:46497070-46497089 None:intergenic 35.0%
! TTGTTTAGAGCTCAAGTAAC+CGG + chr1_1:46497163-46497182 Msa0024240:intron 35.0%
TCTCCGTTAGTTGAATTAGT+TGG + chr1_1:46497312-46497331 Msa0024240:intron 35.0%
AGGATTTGAATCTACGACAT+TGG + chr1_1:46497433-46497452 Msa0024240:intron 35.0%
GGATTTGAATCTACGACATT+GGG + chr1_1:46497434-46497453 Msa0024240:intron 35.0%
TACTATGATTATGATTGCGG+TGG + chr1_1:46497830-46497849 Msa0024240:intron 35.0%
ACGATGATTACGATTGGTAA+GGG - chr1_1:46498201-46498220 None:intergenic 35.0%
TACGATGATTACGATTGGTA+AGG - chr1_1:46498202-46498221 None:intergenic 35.0%
TTGGAGAAGAATATTGTCTG+TGG + chr1_1:46498269-46498288 Msa0024240:intron 35.0%
TGGAGAAGAATATTGTCTGT+GGG + chr1_1:46498270-46498289 Msa0024240:intron 35.0%
GATTGAAATTCAGGTCTGTT+TGG + chr1_1:46498389-46498408 Msa0024240:intron 35.0%
TTATGGCATGTTCATGTCAA+AGG + chr1_1:46498483-46498502 Msa0024240:intron 35.0%
!!! GCTTTTTTCATAAGCTATCG+TGG - chr1_1:46498677-46498696 None:intergenic 35.0%
TAACTAAGCACTTACAGCAT+CGG - chr1_1:46498776-46498795 None:intergenic 35.0%
CTGTAAGTGCTTAGTTAATC+TGG + chr1_1:46498779-46498798 Msa0024240:intron 35.0%
TGCCCCATTTACTAAATAGT+AGG - chr1_1:46498998-46499017 None:intergenic 35.0%
!!! TTACATTTTCTAAGACGGGT+AGG + chr1_1:46499099-46499118 Msa0024240:CDS 35.0%
!!! CATTTTTTCAAGGTTAGCAC+TGG - chr1_1:46499195-46499214 None:intergenic 35.0%
GTGCTAACCTTGAAAAAATG+AGG + chr1_1:46499195-46499214 Msa0024240:CDS 35.0%
!!! TTGCTGTTTTAACACCAACA+AGG - chr1_1:46499617-46499636 None:intergenic 35.0%
GTGTTAAAACAGCAATGTTC+AGG + chr1_1:46499622-46499641 Msa0024240:intron 35.0%
AGCAATGTTCAGGTAGTTAT+TGG + chr1_1:46499632-46499651 Msa0024240:intron 35.0%
ACATAATACCAACTCATCTG+CGG + chr1_1:46499715-46499734 Msa0024240:intron 35.0%
!! AACTGAAAGGCATTACTTTG+TGG + chr1_1:46499857-46499876 Msa0024240:intron 35.0%
CCATTACATCACTACTGAAT+TGG - chr1_1:46499914-46499933 None:intergenic 35.0%
CCAATTCAGTAGTGATGTAA+TGG + chr1_1:46499911-46499930 Msa0024240:intron 35.0%
CACATTGATAAGCAGTTATG+TGG - chr1_1:46499963-46499982 None:intergenic 35.0%
CATAACTGCTTATCAATGTG+CGG + chr1_1:46499963-46499982 Msa0024240:intron 35.0%
!! TCCTAATTAAGTTGGTCCTT+TGG + chr1_1:46500032-46500051 Msa0024240:intron 35.0%
TTGTTTGAAAACTCGGTATC+TGG - chr1_1:46500058-46500077 None:intergenic 35.0%
GACAGCTTGTCAATGATAAT+GGG - chr1_1:46500226-46500245 None:intergenic 35.0%
TGACAGCTTGTCAATGATAA+TGG - chr1_1:46500227-46500246 None:intergenic 35.0%
CAGTTATTAAATGTCCAGCT+TGG + chr1_1:46500245-46500264 Msa0024240:intron 35.0%
GTTATTAAATGTCCAGCTTG+GGG + chr1_1:46500247-46500266 Msa0024240:intron 35.0%
! ATCAGTCTAGGTTGAATGTT+AGG - chr1_1:46500484-46500503 None:intergenic 35.0%
ACCTAGACTGATAGTATAAC+TGG + chr1_1:46500492-46500511 Msa0024240:intron 35.0%
ACCAGTTATACTATCAGTCT+AGG - chr1_1:46500496-46500515 None:intergenic 35.0%
! CTTTCAGTATTGAAACGTCT+CGG + chr1_1:46500567-46500586 Msa0024240:intron 35.0%
CAAAAGTCTATGCAAATTCG+TGG + chr1_1:46500624-46500643 Msa0024240:intron 35.0%
!!! CCGTTGGTTTGTTTTTTATC+TGG - chr1_1:46500806-46500825 None:intergenic 35.0%
GATACTGGTATCTATTTGAG+TGG + chr1_1:46500921-46500940 Msa0024240:intron 35.0%
TGGGTTTGATCTTCAAATGA+GGG + chr1_1:46500941-46500960 Msa0024240:intron 35.0%
GGGAAAAATAAACAAAGCAG+AGG + chr1_1:46500961-46500980 Msa0024240:intron 35.0%
AATAAACAAAGCAGAGGGTT+AGG + chr1_1:46500967-46500986 Msa0024240:intron 35.0%
ATAAACAAAGCAGAGGGTTA+GGG + chr1_1:46500968-46500987 Msa0024240:intron 35.0%
! CTTCTGCATTTGAAACTCAA+GGG - chr1_1:46500997-46501016 None:intergenic 35.0%
! ACTTCTGCATTTGAAACTCA+AGG - chr1_1:46500998-46501017 None:intergenic 35.0%
TTGAGTTTCAAATGCAGAAG+TGG + chr1_1:46500997-46501016 Msa0024240:intron 35.0%
! TGTTCAAGTTAGAACGAGTA+TGG + chr1_1:46501328-46501347 Msa0024240:intron 35.0%
TTCTATCTCTGCTATCATCT+CGG - chr1_1:46501647-46501666 None:intergenic 35.0%
CTTGTGTTGTACCCTTAATA+TGG + chr1_1:46502005-46502024 Msa0024240:intron 35.0%
CTACAGAACTCCCATATTAA+GGG - chr1_1:46502019-46502038 None:intergenic 35.0%
GCAACATTTACACAAGTTTC+AGG - chr1_1:46502221-46502240 None:intergenic 35.0%
GTTAATAAGTTTGAAGGGGA+CGG + chr1_1:46502369-46502388 Msa0024240:CDS 35.0%
TTAATAAGTTTGAAGGGGAC+GGG + chr1_1:46502370-46502389 Msa0024240:CDS 35.0%
ATTGCTGCAATTGCTAAACT+TGG + chr1_1:46502601-46502620 Msa0024240:CDS 35.0%
TGAGATAACTGGTAGTTTGA+TGG + chr1_1:46502666-46502685 Msa0024240:CDS 35.0%
!!! TTTTAGAGCAAACGTTGAGT+GGG + chr1_1:46502792-46502811 Msa0024240:CDS 35.0%
!! GTTCAGAAGAGGTTATTTTC+TGG + chr1_1:46502815-46502834 Msa0024240:CDS 35.0%
!! GGTTATTTTCTGGGTAAATC+TGG + chr1_1:46502825-46502844 Msa0024240:CDS 35.0%
!! TTTTGAAGACACTGTGGTTT+TGG + chr1_1:46502937-46502956 Msa0024240:intron 35.0%
TGATGTTGGATTGAATGTCA+AGG + chr1_1:46502971-46502990 Msa0024240:intron 35.0%
AATCATTTCTATCCCTAGTG+GGG - chr1_1:46503293-46503312 None:intergenic 35.0%
!!! GATTTTTTTTTCCAGCATGG+AGG + chr1_1:46503309-46503328 Msa0024240:intron 35.0%
GCTTCAATTGAATGTTACCA+TGG + chr1_1:46503486-46503505 Msa0024240:intron 35.0%
GAGAAGGATTTGGCTATATT+TGG + chr1_1:46503520-46503539 Msa0024240:CDS 35.0%
! CGAACATTTCTTTTGGCAAA+TGG + chr1_1:46503571-46503590 Msa0024240:CDS 35.0%
! ACTAGGTGTCTTACTGTTTT+AGG + chr1_1:46503671-46503690 Msa0024240:intron 35.0%
!! GGAGTGTCATGAATAGTTTT+TGG + chr1_1:46503692-46503711 Msa0024240:intron 35.0%
! AACTAATGGATGAGAGTTGT+GGG - chr1_1:46503943-46503962 None:intergenic 35.0%
AGCATACATCGTTAAATGCA+AGG - chr1_1:46504001-46504020 None:intergenic 35.0%
!! CATTTGCTGTTTGCTCTTAT+TGG + chr1_1:46504184-46504203 Msa0024240:CDS 35.0%
!!! TCAGCTGCTTTTACATTTGA+AGG - chr1_1:46504249-46504268 None:intergenic 35.0%
TCAGCAACATCATGTTCATT+TGG + chr1_1:46504551-46504570 Msa0024240:intron 35.0%
TATATAAAACGGCTACACGT+GGG - chr1_1:46504666-46504685 None:intergenic 35.0%
TTATATAAAACGGCTACACG+TGG - chr1_1:46504667-46504686 None:intergenic 35.0%
!! CGTGTAGCCGTTTTATATAA+TGG + chr1_1:46504667-46504686 Msa0024240:intron 35.0%
TTACCACTACAGCTGTTATT+TGG - chr1_1:46504714-46504733 None:intergenic 35.0%
! CAACCATGAATGCCAATTTT+GGG - chr1_1:46504763-46504782 None:intergenic 35.0%
! ACAACCATGAATGCCAATTT+TGG - chr1_1:46504764-46504783 None:intergenic 35.0%
TGGTTGTTCTTGTCTTAATG+TGG + chr1_1:46504835-46504854 Msa0024240:intron 35.0%
CTCAATACGAAATTCGAAAC+TGG + chr1_1:46504916-46504935 Msa0024240:intron 35.0%
! TTGGTGGATACTTCTTTCTA+CGG + chr1_1:46504965-46504984 Msa0024240:intron 35.0%
! CATGGCTACTCTAAAAAAGA+TGG + chr1_1:46505017-46505036 Msa0024240:intron 35.0%
GATGTATTTGAGAACTACCA+TGG - chr1_1:46505136-46505155 None:intergenic 35.0%
AAAGTCCATACAATCCTTTC+AGG + chr1_1:46505161-46505180 Msa0024240:intron 35.0%
CATTTCCTGAAAGGATTGTA+TGG - chr1_1:46505169-46505188 None:intergenic 35.0%
CTCTAAGTTCATTTCCTGAA+AGG - chr1_1:46505178-46505197 None:intergenic 35.0%
CTTTCAGGAAATGAACTTAG+AGG + chr1_1:46505176-46505195 Msa0024240:intron 35.0%
ATCGATATGTCAGTAAGACT+TGG + chr1_1:46505257-46505276 Msa0024240:intron 35.0%
! ATATGTCAGTAAGACTTGGT+TGG + chr1_1:46505261-46505280 Msa0024240:intron 35.0%
ACAGTACAAGACAATTAGCT+TGG - chr1_1:46505406-46505425 None:intergenic 35.0%
AAGCTAATTGTCTTGTACTG+TGG + chr1_1:46505405-46505424 Msa0024240:intron 35.0%
ATAATAGGTGGCACAATGAT+TGG - chr1_1:46505533-46505552 None:intergenic 35.0%
GATGCCAAGAAAATAGTTGA+CGG + chr1_1:46505591-46505610 Msa0024240:CDS 35.0%
ATGCCAAGAAAATAGTTGAC+GGG + chr1_1:46505592-46505611 Msa0024240:CDS 35.0%
TCAGTCAACGATAAAAGACT+CGG + chr1_1:46505629-46505648 Msa0024240:CDS 35.0%
AATACACTACTGAAATGGAG+AGG - chr1_1:46505715-46505734 None:intergenic 35.0%
TAAGAAAGAAGCTGAATTCC+TGG + chr1_1:46506015-46506034 Msa0024240:CDS 35.0%
CACACTATTATACCAGGAAT+TGG - chr1_1:46506120-46506139 None:intergenic 35.0%
CTTTGACACACTATTATACC+AGG - chr1_1:46506126-46506145 None:intergenic 35.0%
CAATTCAGGACACGATTATT+TGG - chr1_1:46506177-46506196 None:intergenic 35.0%
GATTGACTGATCAACATAAC+AGG + chr1_1:46506215-46506234 Msa0024240:intron 35.0%
CCAGATAATAATCAGTGATG+GGG + chr1_1:46506245-46506264 Msa0024240:intron 35.0%
! ATGGGGTTTGATAATAACGT+AGG + chr1_1:46506262-46506281 Msa0024240:intron 35.0%
AAAACAAATTGGCCCCTAAA+TGG + chr1_1:46506350-46506369 Msa0024240:intron 35.0%
! TCGACGAAAGATTAATTTGG+TGG + chr1_1:46506395-46506414 Msa0024240:intron 35.0%
! CGAAAGATTAATTTGGTGGA+TGG + chr1_1:46506399-46506418 Msa0024240:intron 35.0%
! ACATATACTTCCCATCGTTT+TGG - chr1_1:46506483-46506502 None:intergenic 35.0%
AGCTCACTTCATTTCTCTAA+TGG + chr1_1:46506538-46506557 Msa0024240:intron 35.0%
GCTCACTTCATTTCTCTAAT+GGG + chr1_1:46506539-46506558 Msa0024240:intron 35.0%
AGAAGGCAAAATCTATGTTC+GGG - chr1_1:46506751-46506770 None:intergenic 35.0%
GGAGTAATGTGAGTTATACT+TGG + chr1_1:46506907-46506926 Msa0024240:intron 35.0%
ACAGAATATTTGCTTGCCAA+TGG + chr1_1:46507013-46507032 Msa0024240:intron 35.0%
!! GAGTTTAATAGAAGCACCAT+TGG - chr1_1:46507032-46507051 None:intergenic 35.0%
TGCTTCTATTAAACTCATGC+AGG + chr1_1:46507036-46507055 Msa0024240:intron 35.0%
GCTTCTATTAAACTCATGCA+GGG + chr1_1:46507037-46507056 Msa0024240:intron 35.0%
!! TCTGGTTAGCTCTATGTAAA+TGG + chr1_1:46507238-46507257 Msa0024240:intron 35.0%
AGACAAATTGGAAAATCTCG+TGG + chr1_1:46507283-46507302 Msa0024240:intron 35.0%
AAATCAAATAGCAGCTGAAG+CGG - chr1_1:46507761-46507780 None:intergenic 35.0%
!! GGTATATGCTATTTCACCTT+TGG + chr1_1:46508104-46508123 Msa0024240:intron 35.0%
! GTTTTCAGTATAGTTGTAGG+TGG + chr1_1:46508191-46508210 Msa0024240:intron 35.0%
TCAAAGCGAAGGATTTCATT+GGG - chr1_1:46508795-46508814 None:intergenic 35.0%
! TTTCAAGTGAAGTGGACATT+AGG - chr1_1:46509001-46509020 None:intergenic 35.0%
ATGTCCACTTCACTTGAAAA+AGG + chr1_1:46509002-46509021 Msa0024240:intron 35.0%
TGTGTTTATATTGCTGTGAC+AGG + chr1_1:46509302-46509321 Msa0024240:intron 35.0%
! GATTTGATGATCAGTGATGA+TGG + chr1_1:46509324-46509343 Msa0024240:CDS 35.0%
CAAACTAAAAGAAACGGGAA+CGG + chr1_1:46509428-46509447 Msa0024240:CDS 35.0%
ACTCATCTGCTTTATGACAT+TGG + chr1_1:46509504-46509523 Msa0024240:intron 35.0%
ATCTGCTTTATGACATTGGT+CGG + chr1_1:46509508-46509527 Msa0024240:intron 35.0%
AATAAACAGGATGTCTTGCA+AGG + chr1_1:46509685-46509704 Msa0024240:intron 35.0%
!! CAACTTCTTGCTATTGATGT+TGG + chr1_1:46509712-46509731 Msa0024240:CDS 35.0%
AGTCAATTCATCACCTATCA+AGG - chr1_1:46509764-46509783 None:intergenic 35.0%
!! AGAAGCATTAAAATGCCGAT+AGG - chr1_1:46509841-46509860 None:intergenic 35.0%
!! CATAAAGGTGTTCAACTTAC+AGG - chr1_1:46509865-46509884 None:intergenic 35.0%
CTGAATAATATGTCCTGTTC+TGG + chr1_1:46509905-46509924 Msa0024240:intron 35.0%
! AATCACGTCTTGTTCAAACA+TGG + chr1_1:46509997-46510016 Msa0024240:intron 35.0%
! ATCACGTCTTGTTCAAACAT+GGG + chr1_1:46509998-46510017 Msa0024240:intron 35.0%
GTGTATGCTTCCAACATAAA+TGG + chr1_1:46510142-46510161 Msa0024240:intron 35.0%
CAAAGATGTAGTAGACCTTA+AGG + chr1_1:46510269-46510288 Msa0024240:intron 35.0%
AACTCGTAAACAAAGCCTTA+AGG - chr1_1:46510287-46510306 None:intergenic 35.0%
!! TAAGGCTTTGTTTACGAGTT+TGG + chr1_1:46510287-46510306 Msa0024240:intron 35.0%
GAAAAAAAGGAAGGAGTAAG+TGG + chr1_1:46510333-46510352 Msa0024240:intron 35.0%
TCCTTATATCTAGTGGTCAT+GGG - chr1_1:46510382-46510401 None:intergenic 35.0%
ATCCTTATATCTAGTGGTCA+TGG - chr1_1:46510383-46510402 None:intergenic 35.0%
CTAACATGTCCATGTATACA+AGG + chr1_1:46510522-46510541 Msa0024240:intron 35.0%
GTACATTGTCCTTGTATACA+TGG - chr1_1:46510534-46510553 None:intergenic 35.0%
TGTAAACGAGAGAAGATAGA+AGG + chr1_1:46510658-46510677 Msa0024240:intron 35.0%
! GGAAAATGTTTTCTTCACAC+AGG + chr1_1:46510743-46510762 Msa0024240:intron 35.0%
CATAATGTTTATACCAGGGA+TGG - chr1_1:46510819-46510838 None:intergenic 35.0%
ATCATCTGAATCTACATCAC+TGG - chr1_1:46511013-46511032 None:intergenic 35.0%
TGATGCCATATTTCTTAGAG+AGG + chr1_1:46511158-46511177 Msa0024240:three_prime_UTR 35.0%
! CAACTCCTCTCTAAGAAATA+TGG - chr1_1:46511166-46511185 Msa0024250:CDS 35.0%
CATATTTCTTAGAGAGGAGT+TGG + chr1_1:46511164-46511183 Msa0024240:three_prime_UTR 35.0%
TCACATATCTTTCGGAATTG+AGG - chr1_1:46511306-46511325 Msa0024250:CDS 35.0%
TGCGTGGTCGAAAACAAAAA+TGG - chr1_1:46496497-46496516 None:intergenic 40.0%
!! CTATCCTTCTGCTTTGTTTC+AGG + chr1_1:46496675-46496694 Msa0024240:intron 40.0%
!! TGTTTCAGGTTCGAATCTCT+CGG + chr1_1:46496689-46496708 Msa0024240:intron 40.0%
!! CAACTTGTTGGTTGGTCTAA+TGG + chr1_1:46497133-46497152 Msa0024240:intron 40.0%
AACTACTTTAGCCACTTCAG+CGG - chr1_1:46497203-46497222 None:intergenic 40.0%
AAAATGGGTAGGTTGCTAGA+AGG + chr1_1:46497345-46497364 Msa0024240:intron 40.0%
TCAATCTAAGAAGAATGGGG+TGG + chr1_1:46497397-46497416 Msa0024240:intron 40.0%
CAATCTAAGAAGAATGGGGT+GGG + chr1_1:46497398-46497417 Msa0024240:intron 40.0%
! GAATCTACGACATTGGGTTT+TGG + chr1_1:46497440-46497459 Msa0024240:intron 40.0%
ATGCTAGTCACATGCATAGT+GGG - chr1_1:46497654-46497673 None:intergenic 40.0%
TATGATTATGATTGCGGTGG+TGG + chr1_1:46497833-46497852 Msa0024240:intron 40.0%
CGATGATTACGATTGGTAAG+GGG - chr1_1:46498200-46498219 None:intergenic 40.0%
AGCTTATTTCCACAAGCTCT+AGG + chr1_1:46498514-46498533 Msa0024240:intron 40.0%
AGTTGCATAATAAGCTACCC+TGG - chr1_1:46498606-46498625 None:intergenic 40.0%
TAAATGGGGCAGTTCAAGAA+AGG + chr1_1:46499007-46499026 Msa0024240:CDS 40.0%
AAATGGGGCAGTTCAAGAAA+GGG + chr1_1:46499008-46499027 Msa0024240:CDS 40.0%
! TAGTGTTTTCTACAGCTCAC+AGG - chr1_1:46499077-46499096 None:intergenic 40.0%
! GATGATGGTATGACTGTCAA+CGG + chr1_1:46499152-46499171 Msa0024240:CDS 40.0%
ATGATGGTATGACTGTCAAC+GGG + chr1_1:46499153-46499172 Msa0024240:CDS 40.0%
! AAGCTTTATATGATGCAGCC+AGG + chr1_1:46499270-46499289 Msa0024240:CDS 40.0%
! AGCTTTATATGATGCAGCCA+GGG + chr1_1:46499271-46499290 Msa0024240:CDS 40.0%
AATTGCTAGCTCAAAAACCC+TGG - chr1_1:46499291-46499310 None:intergenic 40.0%
! ATCCACGTGATGACGATTTA+TGG - chr1_1:46499319-46499338 None:intergenic 40.0%
ATAGGAGACAACCTTTGTGA+TGG + chr1_1:46499496-46499515 Msa0024240:intron 40.0%
AGAACAACATGCCATCACAA+AGG - chr1_1:46499510-46499529 None:intergenic 40.0%
CACGCTAGATGAACTGTAAA+AGG + chr1_1:46499561-46499580 Msa0024240:intron 40.0%
TTAAGTTACCGCAGATGAGT+TGG - chr1_1:46499726-46499745 None:intergenic 40.0%
GCCAAAGGACCAACTTAATT+AGG - chr1_1:46500036-46500055 None:intergenic 40.0%
TACACTAAATTACCCCAAGC+TGG - chr1_1:46500262-46500281 None:intergenic 40.0%
GTGGGTTTGATCTTCAAATG+AGG + chr1_1:46500940-46500959 Msa0024240:intron 40.0%
TGTTCGAACGTAGAAAGCAA+GGG + chr1_1:46501048-46501067 Msa0024240:intron 40.0%
GAGACTGAGTTAGCCATATT+TGG + chr1_1:46501364-46501383 Msa0024240:intron 40.0%
TCTATCTCTGCTATCATCTC+GGG - chr1_1:46501646-46501665 None:intergenic 40.0%
GCTACAGAACTCCCATATTA+AGG - chr1_1:46502020-46502039 None:intergenic 40.0%
TAATATGGGAGTTCTGTAGC+AGG + chr1_1:46502020-46502039 Msa0024240:intron 40.0%
CGAGCGAATCAAATATTGGA+AGG - chr1_1:46502109-46502128 None:intergenic 40.0%
TCTCTGATTAAGCTCTCCAA+GGG - chr1_1:46502273-46502292 None:intergenic 40.0%
TTCTCTGATTAAGCTCTCCA+AGG - chr1_1:46502274-46502293 None:intergenic 40.0%
CAAAACCATTCGTACACTTC+AGG - chr1_1:46502315-46502334 None:intergenic 40.0%
! CTGAAGTGTACGAATGGTTT+TGG + chr1_1:46502313-46502332 Msa0024240:CDS 40.0%
TCCCAGGTCTGAAAAAACTA+AGG + chr1_1:46502528-46502547 Msa0024240:intron 40.0%
!!! CCCTTAGTTTTTTCAGACCT+GGG - chr1_1:46502532-46502551 None:intergenic 40.0%
CCCAGGTCTGAAAAAACTAA+GGG + chr1_1:46502529-46502548 Msa0024240:intron 40.0%
!!! ACCCTTAGTTTTTTCAGACC+TGG - chr1_1:46502533-46502552 None:intergenic 40.0%
! TGTGAGCAAGAAACTTTTGC+CGG - chr1_1:46502628-46502647 None:intergenic 40.0%
!!! CTTTTAGAGCAAACGTTGAG+TGG + chr1_1:46502791-46502810 Msa0024240:CDS 40.0%
! TTTAGAGCAAACGTTGAGTG+GGG + chr1_1:46502793-46502812 Msa0024240:CDS 40.0%
!! GACAACATCTGAAAGCATTG+AGG + chr1_1:46502900-46502919 Msa0024240:CDS 40.0%
!!! GTTCAGTTTTGAAGACACTG+TGG + chr1_1:46502931-46502950 Msa0024240:intron 40.0%
GACATTCAATCCAACATCAC+CGG - chr1_1:46502970-46502989 None:intergenic 40.0%
TCATTACTTTCTACCCCACT+AGG + chr1_1:46503277-46503296 Msa0024240:intron 40.0%
CATTACTTTCTACCCCACTA+GGG + chr1_1:46503278-46503297 Msa0024240:intron 40.0%
TTAAGCATATTCCTCCATGC+TGG - chr1_1:46503323-46503342 None:intergenic 40.0%
ATTGAATGTTACCATGGTGC+AGG + chr1_1:46503492-46503511 Msa0024240:intron 40.0%
! CTTTTGGCAAATGGTTTCGA+TGG + chr1_1:46503580-46503599 Msa0024240:CDS 40.0%
CTAGTTGTACTGCTAGCATT+TGG + chr1_1:46503726-46503745 Msa0024240:CDS 40.0%
!! GATAAAGGTGCTTAAGTTGC+AGG - chr1_1:46503820-46503839 None:intergenic 40.0%
! GAACTAATGGATGAGAGTTG+TGG - chr1_1:46503944-46503963 None:intergenic 40.0%
GGGAAGTTCTTTAACTGCAT+AGG + chr1_1:46504044-46504063 Msa0024240:intron 40.0%
! ATAGGTAGTTTGTGAAGAGC+TGG + chr1_1:46504062-46504081 Msa0024240:intron 40.0%
! TAGTTTGTGAAGAGCTGGAT+TGG + chr1_1:46504067-46504086 Msa0024240:CDS 40.0%
!!! GGATTGGCTTCCTTTTTATC+CGG + chr1_1:46504083-46504102 Msa0024240:CDS 40.0%
!!! GATTGGCTTCCTTTTTATCC+GGG + chr1_1:46504084-46504103 Msa0024240:CDS 40.0%
! ATGAGACTGTTTTGTGATGC+TGG - chr1_1:46504115-46504134 None:intergenic 40.0%
AGCATCACAAAACAGTCTCA+TGG + chr1_1:46504114-46504133 Msa0024240:CDS 40.0%
GCATCACAAAACAGTCTCAT+GGG + chr1_1:46504115-46504134 Msa0024240:CDS 40.0%
AGAGCAAACAGCAAATGCTT+GGG - chr1_1:46504181-46504200 None:intergenic 40.0%
AAGAGCAAACAGCAAATGCT+TGG - chr1_1:46504182-46504201 None:intergenic 40.0%
! TGTTAGGCACAACAAGTTGA+TGG + chr1_1:46504366-46504385 Msa0024240:intron 40.0%
! ATTGCTGCTATTGACTACAC+AGG - chr1_1:46504614-46504633 None:intergenic 40.0%
! TGTTATTTGGCTGTTGTTGG+CGG - chr1_1:46504701-46504720 None:intergenic 40.0%
! AGCTGTTATTTGGCTGTTGT+TGG - chr1_1:46504704-46504723 None:intergenic 40.0%
ACAGCTGTAGTGGTAAAGTT+CGG + chr1_1:46504718-46504737 Msa0024240:intron 40.0%
TAGTCATTCCAGCCCAAAAT+TGG + chr1_1:46504748-46504767 Msa0024240:intron 40.0%
GGAGGATTGTCAAACATTCA+TGG + chr1_1:46504815-46504834 Msa0024240:intron 40.0%
! ATCCTACAAAGCTCTTTTGG+TGG + chr1_1:46504949-46504968 Msa0024240:intron 40.0%
! ATCCACCAAAAGAGCTTTGT+AGG - chr1_1:46504954-46504973 None:intergenic 40.0%
AGCCTCTAGATTCAACTCTT+GGG - chr1_1:46505062-46505081 None:intergenic 40.0%
TAGCCTCTAGATTCAACTCT+TGG - chr1_1:46505063-46505082 None:intergenic 40.0%
CTGTATCTATGCACAAACCA+TGG + chr1_1:46505116-46505135 Msa0024240:intron 40.0%
ACCTCTCTAATATGTGACTC+TGG + chr1_1:46505222-46505241 Msa0024240:intron 40.0%
TGGAAACATTTATTCTGCCG+TGG - chr1_1:46505386-46505405 None:intergenic 40.0%
! TTGCCCGTCAACTATTTTCT+TGG - chr1_1:46505598-46505617 None:intergenic 40.0%
CAGTCAACGATAAAAGACTC+GGG + chr1_1:46505630-46505649 Msa0024240:CDS 40.0%
AGGCATGAAGATGTCAGATT+AGG - chr1_1:46505742-46505761 None:intergenic 40.0%
! AAAAGCTGATTCTCTGCAAG+AGG + chr1_1:46506054-46506073 Msa0024240:CDS 40.0%
GGTTGTGGATGATATTGTAG+AGG - chr1_1:46506090-46506109 None:intergenic 40.0%
ATACCAGGAATTGGTAAAGG+AGG - chr1_1:46506111-46506130 None:intergenic 40.0%
TTCAGGACACGATTATTTGG+AGG - chr1_1:46506174-46506193 None:intergenic 40.0%
ACTGATCAACATAACAGGGA+TGG + chr1_1:46506220-46506239 Msa0024240:intron 40.0%
! CCCCATCACTGATTATTATC+TGG - chr1_1:46506248-46506267 None:intergenic 40.0%
ATAAGCGGCTACTCTATTAC+AGG - chr1_1:46506582-46506601 None:intergenic 40.0%
ACAAATGCAAGAGGGATGAA+GGG - chr1_1:46506726-46506745 None:intergenic 40.0%
AACAAATGCAAGAGGGATGA+AGG - chr1_1:46506727-46506746 None:intergenic 40.0%
GAAGGCAAAATCTATGTTCG+GGG - chr1_1:46506750-46506769 None:intergenic 40.0%
! GACATAAAACTGGCTCAAGA+AGG - chr1_1:46506768-46506787 None:intergenic 40.0%
!!! TGCTTTTTTCCATGGCTTTC+AGG + chr1_1:46506851-46506870 Msa0024240:intron 40.0%
TAGTGATCAAACCATCACAC+CGG + chr1_1:46507066-46507085 Msa0024240:CDS 40.0%
AGGAGGACAGGTTTATGAAA+GGG + chr1_1:46507095-46507114 Msa0024240:CDS 40.0%
ATGACAATGTAAAGGTGGAC+AGG + chr1_1:46507131-46507150 Msa0024240:CDS 40.0%
TTGGAAAATCTCGTGGATTC+TGG + chr1_1:46507290-46507309 Msa0024240:CDS 40.0%
! AGATAGAAGAGTGTGTTTCG+CGG - chr1_1:46507858-46507877 None:intergenic 40.0%
GTTTCTCGTTGCATCTTTAC+AGG - chr1_1:46508253-46508272 None:intergenic 40.0%
GTTAGTAGTGTGCTTTAGTC+AGG + chr1_1:46508281-46508300 Msa0024240:intron 40.0%
! GGTTAGTTACGAACTGGATT+TGG + chr1_1:46508313-46508332 Msa0024240:intron 40.0%
CACTTTACGAATAATGAGGG+AGG - chr1_1:46508491-46508510 None:intergenic 40.0%
CTCCCTCATTATTCGTAAAG+TGG + chr1_1:46508489-46508508 Msa0024240:intron 40.0%
! CGCCACTTTACGAATAATGA+GGG - chr1_1:46508494-46508513 None:intergenic 40.0%
CCTCATTATTCGTAAAGTGG+CGG + chr1_1:46508492-46508511 Msa0024240:intron 40.0%
CTTAAACTGGAACAGAACAG+TGG + chr1_1:46508616-46508635 Msa0024240:intron 40.0%
GAACAGAACAGTGGTTCATT+TGG + chr1_1:46508625-46508644 Msa0024240:intron 40.0%
! GTTCATTTGGTTTAGCTGCA+TGG + chr1_1:46508638-46508657 Msa0024240:intron 40.0%
GAAGGATTTCATTGGGTTCT+TGG - chr1_1:46508788-46508807 None:intergenic 40.0%
CTCAAAGCGAAGGATTTCAT+TGG - chr1_1:46508796-46508815 None:intergenic 40.0%
TTCTTAGAAGCTCAAAGCGA+AGG - chr1_1:46508806-46508825 None:intergenic 40.0%
! GCTTCTAAGAAATGAGCTGA+TGG + chr1_1:46508815-46508834 Msa0024240:CDS 40.0%
AGCTGATGGAACTTGAGAAA+AGG + chr1_1:46508829-46508848 Msa0024240:CDS 40.0%
GCTGATGGAACTTGAGAAAA+GGG + chr1_1:46508830-46508849 Msa0024240:CDS 40.0%
!!! CAGACCTTTTTCAAGTGAAG+TGG - chr1_1:46509009-46509028 None:intergenic 40.0%
AGCTTCACATCCTTATCACA+TGG + chr1_1:46509271-46509290 Msa0024240:intron 40.0%
CAATAGCATGCCATGTGATA+AGG - chr1_1:46509284-46509303 None:intergenic 40.0%
AAAAGACATGGAATAGGGTG+AGG - chr1_1:46509554-46509573 None:intergenic 40.0%
TTGGTCAAAAGGACCTTGAT+AGG + chr1_1:46509748-46509767 Msa0024240:CDS 40.0%
AGGTGATGAATTGACTGAGA+AGG + chr1_1:46509768-46509787 Msa0024240:CDS 40.0%
AACTGAAGCCATGTCAGTTA+AGG - chr1_1:46509815-46509834 None:intergenic 40.0%
ATGGCTTCAGTTGTTCCTAT+CGG + chr1_1:46509823-46509842 Msa0024240:CDS 40.0%
TACACTTCTCTATCCAGAAC+AGG - chr1_1:46509921-46509940 None:intergenic 40.0%
!! GAGTGTTGGTCAAATGAATC+AGG - chr1_1:46510036-46510055 None:intergenic 40.0%
TTTGACCAACACTCCTAAGT+TGG + chr1_1:46510042-46510061 Msa0024240:intron 40.0%
! ATTTGCCAACTTAGGAGTGT+TGG - chr1_1:46510050-46510069 None:intergenic 40.0%
AATCACGCAGCCATTTATGT+TGG - chr1_1:46510155-46510174 None:intergenic 40.0%
AACATAAATGGCTGCGTGAT+TGG + chr1_1:46510154-46510173 Msa0024240:intron 40.0%
ACATAAATGGCTGCGTGATT+GGG + chr1_1:46510155-46510174 Msa0024240:intron 40.0%
!! GCTTTGTTTACGAGTTTGGA+GGG + chr1_1:46510291-46510310 Msa0024240:intron 40.0%
! CTTTGTTTACGAGTTTGGAG+GGG + chr1_1:46510292-46510311 Msa0024240:intron 40.0%
GAGGGTTTGGAAAAAAAGGA+AGG + chr1_1:46510324-46510343 Msa0024240:intron 40.0%
GGAGTAAGTGGAAGAAATAG+AGG + chr1_1:46510345-46510364 Msa0024240:intron 40.0%
ACCCATGACCACTAGATATA+AGG + chr1_1:46510378-46510397 Msa0024240:intron 40.0%
AAGAATGAGATTGTGAGCCT+TGG - chr1_1:46510438-46510457 None:intergenic 40.0%
! CTCGTTTACATTTTCTAGGC+AGG - chr1_1:46510648-46510667 None:intergenic 40.0%
GGATGGTACATATCTCTGAA+TGG - chr1_1:46510802-46510821 None:intergenic 40.0%
ATAAGTGGATGGAATCTGCA+AGG - chr1_1:46510929-46510948 None:intergenic 40.0%
CTTCCTGGTCTGATGAAAAT+TGG + chr1_1:46511099-46511118 Msa0024240:three_prime_UTR 40.0%
! GATCCAATTTTCATCAGACC+AGG - chr1_1:46511105-46511124 None:intergenic 40.0%
ATAAGTTCATTCCACGTGTC+TGG + chr1_1:46511193-46511212 Msa0024240:three_prime_UTR 40.0%
CTTTCGGAATTGAGGAAAGA+CGG - chr1_1:46511298-46511317 Msa0024250:CDS 40.0%
AAGAGATGCAATATGGAAGC+TGG - chr1_1:46511348-46511367 Msa0024250:CDS 40.0%
! AGTTTTGCAGGATCGTTTTC+TGG + chr1_1:46511412-46511431 Msa0024240:three_prime_UTR 40.0%
AGGAAACTGTGACAAAGACA+AGG - chr1_1:46511440-46511459 Msa0024250:CDS 40.0%
GTACAGTGAAATTGCAGGAA+TGG - chr1_1:46511478-46511497 Msa0024250:intron 40.0%
AGTCTGTACAGTGAAATTGC+AGG - chr1_1:46511483-46511502 Msa0024250:intron 40.0%
TGTGACTGTTTGAGAGCTTA+TGG + chr1_1:46511627-46511646 Msa0024240:three_prime_UTR 40.0%
GAGCGAAATAGAGAAAGGAG+AGG - chr1_1:46496521-46496540 None:intergenic 45.0%
CGAACCTGAAACAAAGCAGA+AGG - chr1_1:46496682-46496701 None:intergenic 45.0%
!! GTTTCAGGTTCGAATCTCTC+GGG + chr1_1:46496690-46496709 Msa0024240:intron 45.0%
CCAATCCCACTGTCTACTAA+CGG - chr1_1:46496746-46496765 None:intergenic 45.0%
!!! GGATTGGTTCACTCGGTTTT+TGG + chr1_1:46496759-46496778 Msa0024240:intron 45.0%
! GGATTAGACGGACTCTCTAT+AGG - chr1_1:46497250-46497269 None:intergenic 45.0%
TACCGGAGATTGGGATTAGA+CGG - chr1_1:46497262-46497281 None:intergenic 45.0%
CATGCTAGTCACATGCATAG+TGG - chr1_1:46497655-46497674 None:intergenic 45.0%
CACTATGCATGTGACTAGCA+TGG + chr1_1:46497653-46497672 Msa0024240:intron 45.0%
CGGAGCAAAATAATCGCTGA+GGG - chr1_1:46497733-46497752 None:intergenic 45.0%
ACGGAGCAAAATAATCGCTG+AGG - chr1_1:46497734-46497753 None:intergenic 45.0%
!! CAGCGATTATTTTGCTCCGT+AGG + chr1_1:46497734-46497753 Msa0024240:intron 45.0%
!!! GATTTTGACTACCTTGCGTG+AGG + chr1_1:46498229-46498248 Msa0024240:intron 45.0%
GGCATGAGCAAAACTCAGAT+TGG + chr1_1:46498250-46498269 Msa0024240:intron 45.0%
ATAAGCTGTCCTAGAGCTTG+TGG - chr1_1:46498526-46498545 None:intergenic 45.0%
ATAAGCTATCGTGGAGCTTG+TGG - chr1_1:46498668-46498687 None:intergenic 45.0%
ATTCGAAAGGCAGCAATTCG+AGG - chr1_1:46498934-46498953 None:intergenic 45.0%
TCGAATTGCTGCCTTTCGAA+TGG + chr1_1:46498933-46498952 Msa0024240:CDS 45.0%
CACTTGTGGAACCATTCGAA+AGG - chr1_1:46498947-46498966 None:intergenic 45.0%
TCGAATGGTTCCACAAGTGT+AGG + chr1_1:46498948-46498967 Msa0024240:CDS 45.0%
CGAATGGTTCCACAAGTGTA+GGG + chr1_1:46498949-46498968 Msa0024240:CDS 45.0%
! CACTTTTCTCCCTACACTTG+TGG - chr1_1:46498961-46498980 None:intergenic 45.0%
CCATCATCAGAGGTAGCAAA+TGG - chr1_1:46499140-46499159 None:intergenic 45.0%
! CCATTTGCTACCTCTGATGA+TGG + chr1_1:46499137-46499156 Msa0024240:CDS 45.0%
GACAGTCATACCATCATCAG+AGG - chr1_1:46499150-46499169 None:intergenic 45.0%
GACCATAAATCGTCATCACG+TGG + chr1_1:46499314-46499333 Msa0024240:CDS 45.0%
!! GATCCTGGTTTTCAACAGCT+TGG + chr1_1:46499336-46499355 Msa0024240:CDS 45.0%
AAGCCAAGCTGTTGAAAACC+AGG - chr1_1:46499342-46499361 None:intergenic 45.0%
! TGGTTTTCAACAGCTTGGCT+TGG + chr1_1:46499341-46499360 Msa0024240:CDS 45.0%
! GGTTTTCAACAGCTTGGCTT+GGG + chr1_1:46499342-46499361 Msa0024240:CDS 45.0%
!! GTTTTCAACAGCTTGGCTTG+GGG + chr1_1:46499343-46499362 Msa0024240:CDS 45.0%
CACTTCTCTTCTCTCCTCAT+AGG + chr1_1:46499888-46499907 Msa0024240:intron 45.0%
! CACTACTGAATTGGCCTATG+AGG - chr1_1:46499905-46499924 None:intergenic 45.0%
CTGCTTATCAATGTGCGGAT+TGG + chr1_1:46499968-46499987 Msa0024240:intron 45.0%
AAAACTCGGTATCTGGCCAA+AGG - chr1_1:46500051-46500070 None:intergenic 45.0%
GAAGGGAAGGATTTGAACTG+AGG + chr1_1:46500842-46500861 Msa0024240:intron 45.0%
! GAAGCAGAAGCGCAATAACT+GGG + chr1_1:46500864-46500883 Msa0024240:intron 45.0%
CAGAAGTGGTAGACTCAATG+TGG + chr1_1:46501011-46501030 Msa0024240:intron 45.0%
TCTACGTTCGAACACTCGAT+AGG - chr1_1:46501042-46501061 None:intergenic 45.0%
GTGTTCGAACGTAGAAAGCA+AGG + chr1_1:46501047-46501066 Msa0024240:intron 45.0%
GTTCGAACGTAGAAAGCAAG+GGG + chr1_1:46501049-46501068 Msa0024240:intron 45.0%
TGAAGTGCAGAAAGCGAACA+TGG + chr1_1:46501198-46501217 Msa0024240:intron 45.0%
! GTGCTCTCTCTAGTTGCTTT+CGG + chr1_1:46502195-46502214 Msa0024240:intron 45.0%
!! TGCATTGGTCCAGTTTGCTA+AGG + chr1_1:46502238-46502257 Msa0024240:intron 45.0%
! AGCAGATAGCCTTAGCAAAC+TGG - chr1_1:46502250-46502269 None:intergenic 45.0%
TTCGTACACTTCAGGCTGTT+TGG - chr1_1:46502307-46502326 None:intergenic 45.0%
AACAGCCTGAAGTGTACGAA+TGG + chr1_1:46502307-46502326 Msa0024240:CDS 45.0%
ACATGAAGGAGCAAGAACAG+AGG - chr1_1:46502467-46502486 None:intergenic 45.0%
CAATGCATGTAAGTGCAAGC+AGG - chr1_1:46502585-46502604 None:intergenic 45.0%
TGCAATTGCTAAACTTGGCC+CGG + chr1_1:46502606-46502625 Msa0024240:CDS 45.0%
! GTGAGCAAGAAACTTTTGCC+GGG - chr1_1:46502627-46502646 None:intergenic 45.0%
!! TCCATGAGCACTGAGATAAC+TGG + chr1_1:46502655-46502674 Msa0024240:CDS 45.0%
ACCAGTTATCTCAGTGCTCA+TGG - chr1_1:46502659-46502678 None:intergenic 45.0%
! TGGTAGTTTGATGGACATGC+TGG + chr1_1:46502675-46502694 Msa0024240:CDS 45.0%
! AGTTTGATGGACATGCTGGT+TGG + chr1_1:46502679-46502698 Msa0024240:CDS 45.0%
GTTGCAGCAGGCTATTGATA+AGG + chr1_1:46502858-46502877 Msa0024240:CDS 45.0%
!!! CTGTGGTTTTGGCACTAAAC+CGG + chr1_1:46502948-46502967 Msa0024240:intron 45.0%
! ACTAAGTGAGGTTGGCTACA+TGG - chr1_1:46503206-46503225 None:intergenic 45.0%
ATGTAGCCAACCTCACTTAG+TGG + chr1_1:46503205-46503224 Msa0024240:intron 45.0%
TGTAGCCAACCTCACTTAGT+GGG + chr1_1:46503206-46503225 Msa0024240:intron 45.0%
! TGTTACCATGGTGCAGGTTT+TGG + chr1_1:46503498-46503517 Msa0024240:intron 45.0%
!!! GCAGGTTTTGGAGAAGGATT+TGG + chr1_1:46503510-46503529 Msa0024240:intron 45.0%
CTGGTGATTCCCGGATAAAA+AGG - chr1_1:46504096-46504115 None:intergenic 45.0%
TTTGTGATGCTGGTGATTCC+CGG - chr1_1:46504105-46504124 None:intergenic 45.0%
CATGGGCATAGTAAACCAGA+AGG + chr1_1:46504132-46504151 Msa0024240:CDS 45.0%
CAGCTGAATTTCTGTCCAGA+GGG + chr1_1:46504262-46504281 Msa0024240:CDS 45.0%
!! CAACAAGTTGATGGAGTGCA+TGG + chr1_1:46504375-46504394 Msa0024240:CDS 45.0%
ATGGAGTGCATGGATGAACT+TGG + chr1_1:46504385-46504404 Msa0024240:CDS 45.0%
TGGAGTGCATGGATGAACTT+GGG + chr1_1:46504386-46504405 Msa0024240:CDS 45.0%
CAGCCAAATAACAGCTGTAG+TGG + chr1_1:46504708-46504727 Msa0024240:intron 45.0%
! CATGAATGCCAATTTTGGGC+TGG - chr1_1:46504759-46504778 None:intergenic 45.0%
CAGCCCAAAATTGGCATTCA+TGG + chr1_1:46504757-46504776 Msa0024240:intron 45.0%
GTCCCAAGAGTTGAATCTAG+AGG + chr1_1:46505057-46505076 Msa0024240:intron 45.0%
GCCAGAGTCACATATTAGAG+AGG - chr1_1:46505226-46505245 None:intergenic 45.0%
! CTTTTTCTACCAGAGAGCCA+CGG + chr1_1:46505366-46505385 Msa0024240:intron 45.0%
! AGACTCGGGTTCTTTTGATG+AGG + chr1_1:46505644-46505663 Msa0024240:CDS 45.0%
! CATGTGTCAAGCTCTAGTTC+TGG + chr1_1:46505941-46505960 Msa0024240:CDS 45.0%
!! GTCAAGCTCTAGTTCTGGAA+AGG + chr1_1:46505946-46505965 Msa0024240:CDS 45.0%
GAAAGAAGCTGAATTCCTGG+AGG + chr1_1:46506018-46506037 Msa0024240:CDS 45.0%
! GCAGAGAATCAGCTTTTGCT+CGG - chr1_1:46506051-46506070 None:intergenic 45.0%
GGAATTGGTAAAGGAGGTTG+TGG - chr1_1:46506105-46506124 None:intergenic 45.0%
CAACCTCCTTTACCAATTCC+TGG + chr1_1:46506105-46506124 Msa0024240:intron 45.0%
GGAGGTAGAAACCGAAAAAG+AGG - chr1_1:46506156-46506175 None:intergenic 45.0%
GTCAATGAAGGCTGTCAAAG+TGG - chr1_1:46506426-46506445 None:intergenic 45.0%
! TTGACACTGAGCTCCCATTT+TGG + chr1_1:46506441-46506460 Msa0024240:intron 45.0%
TTCGGGGAACAAATGCAAGA+GGG - chr1_1:46506734-46506753 None:intergenic 45.0%
ATGAATGCACCTGAAAGCCA+TGG - chr1_1:46506863-46506882 None:intergenic 45.0%
GAGGAGGACAGGTTTATGAA+AGG + chr1_1:46507094-46507113 Msa0024240:CDS 45.0%
TAAAGGTGGACAGGAGCAAA+AGG + chr1_1:46507140-46507159 Msa0024240:CDS 45.0%
CATACATGAGCATCCACATC+AGG - chr1_1:46507358-46507377 None:intergenic 45.0%
TAGCTGCTATAGTGGCATAG+TGG + chr1_1:46507718-46507737 Msa0024240:intron 45.0%
GTGACCGCTATTTGTCATAC+TGG + chr1_1:46508083-46508102 Msa0024240:intron 45.0%
!! TGCTATTTCACCTTTGGGGT+CGG + chr1_1:46508110-46508129 Msa0024240:intron 45.0%
TGTCACATAGTAGTCAACCC+CGG - chr1_1:46508153-46508172 None:intergenic 45.0%
GCTTTAGTCAGGATAGTTGC+TGG + chr1_1:46508292-46508311 Msa0024240:intron 45.0%
! GTTGCTGGTTAGTTACGAAC+TGG + chr1_1:46508307-46508326 Msa0024240:intron 45.0%
! CCGCCACTTTACGAATAATG+AGG - chr1_1:46508495-46508514 None:intergenic 45.0%
!! GGACTTGCTATCTTGTTTGC+AGG + chr1_1:46508719-46508738 Msa0024240:intron 45.0%
AACAGCCTGCACCAAATGTA+GGG + chr1_1:46508754-46508773 Msa0024240:CDS 45.0%
CTGACTGATAGGCACTTCTT+TGG - chr1_1:46508857-46508876 None:intergenic 45.0%
TTAGGATGAGACAGCGTAGT+AGG - chr1_1:46508983-46509002 None:intergenic 45.0%
! GATGATGGTGCCCGTTATAA+CGG + chr1_1:46509339-46509358 Msa0024240:CDS 45.0%
TCCAGCATCACCGTTATAAC+GGG - chr1_1:46509352-46509371 None:intergenic 45.0%
CTCCAGCATCACCGTTATAA+CGG - chr1_1:46509353-46509372 None:intergenic 45.0%
!! TATTGATGTTGGTGCTGCCT+CGG + chr1_1:46509723-46509742 Msa0024240:CDS 45.0%
AACTCAGGATAGTCACGTGT+GGG - chr1_1:46510210-46510229 None:intergenic 45.0%
GTCAATCAGCTAACTCAGCA+AGG - chr1_1:46510240-46510259 None:intergenic 45.0%
!! GGCTTTGTTTACGAGTTTGG+AGG + chr1_1:46510290-46510309 Msa0024240:intron 45.0%
TTTACGAGTTTGGAGGGGAA+GGG + chr1_1:46510297-46510316 Msa0024240:intron 45.0%
AGGGGAGGGTTTGGAAAAAA+AGG + chr1_1:46510320-46510339 Msa0024240:intron 45.0%
TCAGAGATATGTACCATCCC+TGG + chr1_1:46510803-46510822 Msa0024240:CDS 45.0%
! CTTTCTGGTGCATAAGTGGA+TGG - chr1_1:46510940-46510959 None:intergenic 45.0%
CATCCACTTATGCACCAGAA+AGG + chr1_1:46510938-46510957 Msa0024240:CDS 45.0%
! CAACCTTTCTGGTGCATAAG+TGG - chr1_1:46510944-46510963 None:intergenic 45.0%
CACTTATGCACCAGAAAGGT+TGG + chr1_1:46510942-46510961 Msa0024240:CDS 45.0%
CTCAAGAGATCCAACCTTTC+TGG - chr1_1:46510955-46510974 None:intergenic 45.0%
CAGAAAGGTTGGATCTCTTG+AGG + chr1_1:46510953-46510972 Msa0024240:CDS 45.0%
CTGGTTCCCGATATTTGGAA+GGG + chr1_1:46511269-46511288 Msa0024240:three_prime_UTR 45.0%
ACGGTCACCCTTCCAAATAT+CGG - chr1_1:46511279-46511298 Msa0024250:CDS 45.0%
AATGGCACATGGAATGAAGG+AGG - chr1_1:46511460-46511479 Msa0024250:CDS 45.0%
AGGAATGGCACATGGAATGA+AGG - chr1_1:46511463-46511482 Msa0024250:intron 45.0%
GAAATTGCAGGAATGGCACA+TGG - chr1_1:46511471-46511490 Msa0024250:intron 45.0%
GGGATGCAATCCAGAATTTG+AGG - chr1_1:46511822-46511841 Msa0024250:intron 45.0%
!! ATTAAAAAATACTATATTTA+TGG + chr1_1:46497510-46497529 Msa0024240:intron 5.0%
!! ATTAAATTTAAAAAGATAAT+AGG - chr1_1:46505548-46505567 None:intergenic 5.0%
!! ATTAAAAAAAAAAATCAATA+AGG - chr1_1:46508939-46508958 None:intergenic 5.0%
TAGAGAAAGGAGAGGTTGCG+TGG - chr1_1:46496513-46496532 None:intergenic 50.0%
TTGGCTCCGTTAGTAGACAG+TGG + chr1_1:46496737-46496756 Msa0024240:intron 50.0%
TGGCTCCGTTAGTAGACAGT+GGG + chr1_1:46496738-46496757 Msa0024240:intron 50.0%
CCGTTAGTAGACAGTGGGAT+TGG + chr1_1:46496743-46496762 Msa0024240:intron 50.0%
!! GACAGTGGGATTGGTTCACT+CGG + chr1_1:46496752-46496771 Msa0024240:intron 50.0%
!! GGTTCACTCGGTTTTTGGAC+CGG + chr1_1:46496764-46496783 Msa0024240:intron 50.0%
GTCCGTCTAATCCCAATCTC+CGG + chr1_1:46497257-46497276 Msa0024240:intron 50.0%
! TTTTGCTCATGCCTCACGCA+AGG - chr1_1:46498243-46498262 None:intergenic 50.0%
! CATGATTTGTCCTCGAGCAG+TGG + chr1_1:46499044-46499063 Msa0024240:CDS 50.0%
AATCGTCATCACGTGGATCC+TGG + chr1_1:46499321-46499340 Msa0024240:CDS 50.0%
TGACAATGCCTTCACCCATG+CGG - chr1_1:46499378-46499397 None:intergenic 50.0%
!! GGTGAAGGCATTGTCATGTC+AGG + chr1_1:46499382-46499401 Msa0024240:CDS 50.0%
! GGAAGCAGAAGCGCAATAAC+TGG + chr1_1:46500863-46500882 Msa0024240:intron 50.0%
AACAAAGCAGAGGGTTAGGG+AGG + chr1_1:46500971-46500990 Msa0024240:intron 50.0%
! CAGAGTCAGGCAAGTTTTGC+CGG + chr1_1:46501072-46501091 Msa0024240:intron 50.0%
! AGAGTCAGGCAAGTTTTGCC+GGG + chr1_1:46501073-46501092 Msa0024240:intron 50.0%
ACAAAGGACGTCACTACAGC+TGG - chr1_1:46502351-46502370 None:intergenic 50.0%
TGGCACTAAACCGGTGATGT+TGG + chr1_1:46502957-46502976 Msa0024240:intron 50.0%
CTCATCCCACTAAGTGAGGT+TGG - chr1_1:46503214-46503233 None:intergenic 50.0%
CAACCTCACTTAGTGGGATG+AGG + chr1_1:46503212-46503231 Msa0024240:intron 50.0%
AAGCCTCATCCCACTAAGTG+AGG - chr1_1:46503218-46503237 None:intergenic 50.0%
TCACTTAGTGGGATGAGGCT+TGG + chr1_1:46503217-46503236 Msa0024240:intron 50.0%
CTTCTCCAAAACCTGCACCA+TGG - chr1_1:46503506-46503525 None:intergenic 50.0%
!!! CATGGTGCAGGTTTTGGAGA+AGG + chr1_1:46503504-46503523 Msa0024240:intron 50.0%
GCTAGCAGTACAACTAGCAC+AGG - chr1_1:46503723-46503742 None:intergenic 50.0%
TCTGCATTTGGAGGACCTTC+TGG - chr1_1:46504150-46504169 None:intergenic 50.0%
GTCACTGCTTCTGCATTTGG+AGG - chr1_1:46504159-46504178 None:intergenic 50.0%
TGGGTCACTGCTTCTGCATT+TGG - chr1_1:46504162-46504181 None:intergenic 50.0%
GCAGCTGAATTTCTGTCCAG+AGG + chr1_1:46504261-46504280 Msa0024240:CDS 50.0%
GCATTGCTCTAGTTACCCTC+TGG - chr1_1:46504280-46504299 None:intergenic 50.0%
CAGCAATAGCAGTTGCTCCT+AGG + chr1_1:46504627-46504646 Msa0024240:intron 50.0%
TGGGATTTCACATAGCGCCT+AGG - chr1_1:46504647-46504666 None:intergenic 50.0%
TTTATTCTGCCGTGGCTCTC+TGG - chr1_1:46505378-46505397 None:intergenic 50.0%
GAAAGCAGCCTGTTCTGACT+TGG + chr1_1:46505976-46505995 Msa0024240:CDS 50.0%
TGGGAGCTCAGTGTCAATGA+AGG - chr1_1:46506438-46506457 None:intergenic 50.0%
GTTCGGGGAACAAATGCAAG+AGG - chr1_1:46506735-46506754 None:intergenic 50.0%
GATCAAACCATCACACCGGT+TGG + chr1_1:46507070-46507089 Msa0024240:CDS 50.0%
TGAGCATCCACATCAGGTTC+CGG - chr1_1:46507352-46507371 None:intergenic 50.0%
GGCACCATAGTAGTCAACAG+CGG + chr1_1:46507604-46507623 Msa0024240:intron 50.0%
GTTCGTTGCCACTATACGCA+CGG - chr1_1:46507651-46507670 None:intergenic 50.0%
ATAGTGGCAACGAACCGCTA+TGG + chr1_1:46507656-46507675 Msa0024240:intron 50.0%
CGCTACGACGATTACCATAG+CGG - chr1_1:46507673-46507692 None:intergenic 50.0%
CGCTATGGTAATCGTCGTAG+CGG + chr1_1:46507671-46507690 Msa0024240:intron 50.0%
! GGCTGCTTTAGCTGCTATAG+TGG + chr1_1:46507710-46507729 Msa0024240:intron 50.0%
GCTATAGTGGCATAGTGGTG+CGG + chr1_1:46507723-46507742 Msa0024240:intron 50.0%
TAGTAGTCAACCCCGGATAG+CGG - chr1_1:46508146-46508165 None:intergenic 50.0%
GAACAGCCTGCACCAAATGT+AGG + chr1_1:46508753-46508772 Msa0024240:CDS 50.0%
ACAGCCTGCACCAAATGTAG+GGG + chr1_1:46508755-46508774 Msa0024240:CDS 50.0%
!! ACAACCCCTACATTTGGTGC+AGG - chr1_1:46508762-46508781 None:intergenic 50.0%
TGCACCAAATGTAGGGGTTG+TGG + chr1_1:46508761-46508780 Msa0024240:CDS 50.0%
TGGTCCACAACCCCTACATT+TGG - chr1_1:46508768-46508787 None:intergenic 50.0%
CGTTATAACGGTGATGCTGG+AGG + chr1_1:46509351-46509370 Msa0024240:CDS 50.0%
!! TGATGCTGGAGGTGTTCAGA+TGG + chr1_1:46509362-46509381 Msa0024240:CDS 50.0%
TGACATTGGTCGGATGATGC+TGG + chr1_1:46509518-46509537 Msa0024240:intron 50.0%
GACATTGGTCGGATGATGCT+GGG + chr1_1:46509519-46509538 Msa0024240:intron 50.0%
!! ATTGATGTTGGTGCTGCCTC+GGG + chr1_1:46509724-46509743 Msa0024240:CDS 50.0%
TAAATGGCTGCGTGATTGGG+TGG + chr1_1:46510158-46510177 Msa0024240:intron 50.0%
GAACTCAGGATAGTCACGTG+TGG - chr1_1:46510211-46510230 None:intergenic 50.0%
CAGCAAGGCTAGTAGAACTC+AGG - chr1_1:46510225-46510244 None:intergenic 50.0%
GTTTACGAGTTTGGAGGGGA+AGG + chr1_1:46510296-46510315 Msa0024240:intron 50.0%
GTGAACTTTCCACTGTGCCA+AGG + chr1_1:46510418-46510437 Msa0024240:intron 50.0%
TTCACACAGGTTACTGCCGT+TGG + chr1_1:46510756-46510775 Msa0024240:intron 50.0%
TCACACAGGTTACTGCCGTT+GGG + chr1_1:46510757-46510776 Msa0024240:intron 50.0%
CAACATTGCTGCATGCCCAA+CGG - chr1_1:46510775-46510794 None:intergenic 50.0%
TGTAGCCACTGGTGTTTACC+CGG - chr1_1:46511223-46511242 Msa0024250:CDS 50.0%
! GCTACAATCCTGAGGAGCAT+CGG + chr1_1:46511237-46511256 Msa0024240:three_prime_UTR 50.0%
!! CTACAATCCTGAGGAGCATC+GGG + chr1_1:46511238-46511257 Msa0024240:three_prime_UTR 50.0%
GGTTCCTGGTTCCCGATATT+TGG + chr1_1:46511264-46511283 Msa0024240:three_prime_UTR 50.0%
CCTTCCAAATATCGGGAACC+AGG - chr1_1:46511271-46511290 Msa0024250:CDS 50.0%
CCTGGTTCCCGATATTTGGA+AGG + chr1_1:46511268-46511287 Msa0024240:three_prime_UTR 50.0%
CGGTCACCCTTCCAAATATC+GGG - chr1_1:46511278-46511297 Msa0024250:CDS 50.0%
!! GGATCAGCTTCGAGTTTTGC+AGG + chr1_1:46511400-46511419 Msa0024240:three_prime_UTR 50.0%
TTGTCCTCGAGCAGTGGTCA+AGG + chr1_1:46499050-46499069 Msa0024240:CDS 55.0%
!! TTAGCACTGGCGTCAGCTTG+TGG - chr1_1:46499182-46499201 None:intergenic 55.0%
TTGGGGTAGACCAAACCGCA+TGG + chr1_1:46499360-46499379 Msa0024240:CDS 55.0%
TGGGGTAGACCAAACCGCAT+GGG + chr1_1:46499361-46499380 Msa0024240:CDS 55.0%
AGACCAAACCGCATGGGTGA+AGG + chr1_1:46499367-46499386 Msa0024240:CDS 55.0%
ATGCCTTCACCCATGCGGTT+TGG - chr1_1:46499373-46499392 None:intergenic 55.0%
AGAAAGCAAGGGGCAGAGTC+AGG + chr1_1:46501059-46501078 Msa0024240:intron 55.0%
! TCAGGCAAGTTTTGCCGGGA+GGG + chr1_1:46501077-46501096 Msa0024240:intron 55.0%
GCTAAGGCTATCTGCTCCCT+TGG + chr1_1:46502254-46502273 Msa0024240:CDS 55.0%
!! GCTCTAAAAGCTGCAGCTCG+AGG - chr1_1:46502781-46502800 None:intergenic 55.0%
CGTTGAGTGGGGTTCAGAAG+AGG + chr1_1:46502804-46502823 Msa0024240:CDS 55.0%
GGTTCAGAAGCAGTTGCAGC+AGG + chr1_1:46502846-46502865 Msa0024240:CDS 55.0%
TTGCTCGGAAAGATGCCTCC+AGG - chr1_1:46506036-46506055 None:intergenic 55.0%
! AACCATCACACCGGTTGGTG+AGG + chr1_1:46507075-46507094 Msa0024240:CDS 55.0%
AACCTGTCCTCCTCACCAAC+CGG - chr1_1:46507088-46507107 None:intergenic 55.0%
TCGGGCTTTCTGGGTATAGG+AGG - chr1_1:46507328-46507347 None:intergenic 55.0%
TATACCCAGAAAGCCCGACC+CGG + chr1_1:46507330-46507349 Msa0024240:CDS 55.0%
ATCCACATCAGGTTCCGGGT+CGG - chr1_1:46507347-46507366 None:intergenic 55.0%
GAGCATCCACATCAGGTTCC+GGG - chr1_1:46507351-46507370 None:intergenic 55.0%
! TCGGCCGCTGTTGACTACTA+TGG - chr1_1:46507611-46507630 None:intergenic 55.0%
TAGTCAACAGCGGCCGATAG+CGG + chr1_1:46507614-46507633 Msa0024240:intron 55.0%
TATAGCGGCCGTGCGTATAG+TGG + chr1_1:46507640-46507659 Msa0024240:intron 55.0%
AGCGGCGCGGAATCAAATAG+CGG + chr1_1:46507689-46507708 Msa0024240:intron 55.0%
TAGTGGTGCGGAGCGGATAA+CGG + chr1_1:46507735-46507754 Msa0024240:intron 55.0%
! AAGAGTGTGTTTCGCGGCAC+AGG - chr1_1:46507852-46507871 None:intergenic 55.0%
GCCCGTTATAACGGTGATGC+TGG + chr1_1:46509348-46509367 Msa0024240:CDS 55.0%
! CTGCCTCGGGTTTGGTCAAA+AGG + chr1_1:46509737-46509756 Msa0024240:CDS 55.0%
! GGTCCTTTTGACCAAACCCG+AGG - chr1_1:46509743-46509762 None:intergenic 55.0%
GGCTAGAGCAGGCAGACATA+CGG - chr1_1:46510189-46510208 None:intergenic 55.0%
GATTGTGAGCCTTGGCACAG+TGG - chr1_1:46510430-46510449 None:intergenic 55.0%
CGTTGGGCATGCAGCAATGT+TGG + chr1_1:46510773-46510792 Msa0024240:CDS 55.0%
CAGCTGCGTTCTTCGCTTTC+TGG + chr1_1:46511124-46511143 Msa0024240:three_prime_UTR 55.0%
ATTCCACGTGTCTGGCACTC+CGG + chr1_1:46511201-46511220 Msa0024240:three_prime_UTR 55.0%
CACCAGTGGCTACAATCCTG+AGG + chr1_1:46511229-46511248 Msa0024240:three_prime_UTR 55.0%
CTCCTCAGGATTGTAGCCAC+TGG - chr1_1:46511234-46511253 Msa0024250:CDS 55.0%
!! AATCCTGAGGAGCATCGGGT+GGG + chr1_1:46511242-46511261 Msa0024240:three_prime_UTR 55.0%
GCTCAAGTAACCGGCTGAGC+CGG + chr1_1:46497172-46497191 Msa0024240:intron 60.0%
GGGGTGGGATCATGCTCTGT+AGG + chr1_1:46497413-46497432 Msa0024240:intron 60.0%
AGGACCTTGACCACTGCTCG+AGG - chr1_1:46499057-46499076 None:intergenic 60.0%
! GTCAGGCAAGTTTTGCCGGG+AGG + chr1_1:46501076-46501095 Msa0024240:intron 60.0%
! CAAACAGTGTCGCTCCCTCC+CGG - chr1_1:46501094-46501113 None:intergenic 60.0%
GGGAGCGACACTGTTTGCGT+AGG + chr1_1:46501097-46501116 Msa0024240:intron 60.0%
CTCCTCACCAACCGGTGTGA+TGG - chr1_1:46507080-46507099 None:intergenic 60.0%
!! CATCACACCGGTTGGTGAGG+AGG + chr1_1:46507078-46507097 Msa0024240:CDS 60.0%
GGGTCGGGCTTTCTGGGTAT+AGG - chr1_1:46507331-46507350 None:intergenic 60.0%
TCCACATCAGGTTCCGGGTC+GGG - chr1_1:46507346-46507365 None:intergenic 60.0%
! GGCCGATAGCGGCACTATAG+CGG + chr1_1:46507625-46507644 Msa0024240:intron 60.0%
! GGCCGCTATAGTGCCGCTAT+CGG - chr1_1:46507630-46507649 None:intergenic 60.0%
TGGTAATCGTCGTAGCGGCG+CGG + chr1_1:46507676-46507695 Msa0024240:intron 60.0%
AGTGGCATAGTGGTGCGGAG+CGG + chr1_1:46507728-46507747 Msa0024240:intron 60.0%
TCTTGTTGAGGTGGGGGGGT+GGG - chr1_1:46508450-46508469 None:intergenic 60.0%
!! TGTTGGTGCTGCCTCGGGTT+TGG + chr1_1:46509729-46509748 Msa0024240:CDS 60.0%
!! AGTCACGTGTGGGCTAGAGC+AGG - chr1_1:46510200-46510219 None:intergenic 60.0%
ACGAGTTTGGAGGGGAAGGG+AGG + chr1_1:46510300-46510319 Msa0024240:intron 60.0%
CGAGTTTGGAGGGGAAGGGA+GGG + chr1_1:46510301-46510320 Msa0024240:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG + chr1_1:46510302-46510321 Msa0024240:intron 60.0%
TTCCACGTGTCTGGCACTCC+GGG + chr1_1:46511202-46511221 Msa0024240:three_prime_UTR 60.0%
GCACTCCGGGTAAACACCAG+TGG + chr1_1:46511215-46511234 Msa0024240:three_prime_UTR 60.0%
!! CAATCCTGAGGAGCATCGGG+TGG + chr1_1:46511241-46511260 Msa0024240:three_prime_UTR 60.0%
!! ATCCTGAGGAGCATCGGGTG+GGG + chr1_1:46511243-46511262 Msa0024240:three_prime_UTR 60.0%
AGCCACTTCAGCGGCTCAGC+CGG - chr1_1:46497194-46497213 None:intergenic 65.0%
!! CACCGGTTGGTGAGGAGGAC+AGG + chr1_1:46507083-46507102 Msa0024240:CDS 65.0%
GGTTCCGGGTCGGGCTTTCT+GGG - chr1_1:46507337-46507356 None:intergenic 65.0%
AGGTTCCGGGTCGGGCTTTC+TGG - chr1_1:46507338-46507357 None:intergenic 65.0%
TTCGTAGCGGCCGACCCCAA+AGG - chr1_1:46508123-46508142 None:intergenic 65.0%
GGCCGCTACGAACCGCTATC+CGG + chr1_1:46508131-46508150 Msa0024240:intron 65.0%
GCCGCTACGAACCGCTATCC+GGG + chr1_1:46508132-46508151 Msa0024240:intron 65.0%
! CCCCGGATAGCGGTTCGTAG+CGG - chr1_1:46508136-46508155 None:intergenic 65.0%
CCGCTACGAACCGCTATCCG+GGG + chr1_1:46508133-46508152 Msa0024240:intron 65.0%
TTTGGAGGGGAAGGGAGGGG+AGG + chr1_1:46510305-46510324 Msa0024240:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+GGG + chr1_1:46510306-46510325 Msa0024240:intron 65.0%
! TACCCGGAGTGCCAGACACG+TGG - chr1_1:46511207-46511226 Msa0024250:CDS 65.0%
AACCCCACCCGATGCTCCTC+AGG - chr1_1:46511248-46511267 Msa0024250:CDS 65.0%
AGCCGGCTGAGCCGCTGAAG+TGG + chr1_1:46497189-46497208 Msa0024240:intron 70.0%
GCCCGACCCGGAACCTGATG+TGG + chr1_1:46507342-46507361 Msa0024240:CDS 70.0%
GTTGAGGTGGGGGGGTGGGA+GGG - chr1_1:46508446-46508465 None:intergenic 70.0%
TGTTGAGGTGGGGGGGTGGG+AGG - chr1_1:46508447-46508466 None:intergenic 70.0%
GGGGAAGGGAGGGGAGGGTT+TGG + chr1_1:46510311-46510330 Msa0024240:intron 70.0%
!! GGAGCATCGGGTGGGGTTCC+TGG + chr1_1:46511250-46511269 Msa0024240:three_prime_UTR 70.0%
! AGCGGCTCAGCCGGCTCAGC+CGG - chr1_1:46497185-46497204 None:intergenic 75.0%
AGGTGGGGGGGTGGGAGGGA+GGG - chr1_1:46508442-46508461 None:intergenic 75.0%
! GAGGTGGGGGGGTGGGAGGG+AGG - chr1_1:46508443-46508462 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 46496470 46511842 46496470 ID=Msa0024240;Name=Msa0024240
chr1_1 mRNA 46496470 46511842 46496470 ID=Msa0024240-mRNA-1;Parent=Msa0024240;Name=Msa0024240-mRNA-1;_AED=0.09;_eAED=0.09;_QI=147|0.88|0.94|0.94|1|1|19|789|926
chr1_1 exon 46496470 46496660 46496470 ID=Msa0024240-mRNA-1:exon:13230;Parent=Msa0024240-mRNA-1
chr1_1 exon 46498929 46499403 46498929 ID=Msa0024240-mRNA-1:exon:13231;Parent=Msa0024240-mRNA-1
chr1_1 exon 46501600 46501691 46501600 ID=Msa0024240-mRNA-1:exon:13232;Parent=Msa0024240-mRNA-1
chr1_1 exon 46502251 46502415 46502251 ID=Msa0024240-mRNA-1:exon:13233;Parent=Msa0024240-mRNA-1
chr1_1 exon 46502534 46502921 46502534 ID=Msa0024240-mRNA-1:exon:13234;Parent=Msa0024240-mRNA-1
chr1_1 exon 46503514 46503632 46503514 ID=Msa0024240-mRNA-1:exon:13235;Parent=Msa0024240-mRNA-1
chr1_1 exon 46503719 46503778 46503719 ID=Msa0024240-mRNA-1:exon:13236;Parent=Msa0024240-mRNA-1
chr1_1 exon 46503910 46503982 46503910 ID=Msa0024240-mRNA-1:exon:13237;Parent=Msa0024240-mRNA-1
chr1_1 exon 46504066 46504283 46504066 ID=Msa0024240-mRNA-1:exon:13238;Parent=Msa0024240-mRNA-1
chr1_1 exon 46504372 46504416 46504372 ID=Msa0024240-mRNA-1:exon:13239;Parent=Msa0024240-mRNA-1
chr1_1 exon 46505572 46505665 46505572 ID=Msa0024240-mRNA-1:exon:13240;Parent=Msa0024240-mRNA-1
chr1_1 exon 46505884 46506075 46505884 ID=Msa0024240-mRNA-1:exon:13241;Parent=Msa0024240-mRNA-1
chr1_1 exon 46507058 46507161 46507058 ID=Msa0024240-mRNA-1:exon:13242;Parent=Msa0024240-mRNA-1
chr1_1 exon 46507285 46507372 46507285 ID=Msa0024240-mRNA-1:exon:13243;Parent=Msa0024240-mRNA-1
chr1_1 exon 46508741 46508887 46508741 ID=Msa0024240-mRNA-1:exon:13244;Parent=Msa0024240-mRNA-1
chr1_1 exon 46509324 46509449 46509324 ID=Msa0024240-mRNA-1:exon:13245;Parent=Msa0024240-mRNA-1
chr1_1 exon 46509694 46509864 46509694 ID=Msa0024240-mRNA-1:exon:13246;Parent=Msa0024240-mRNA-1
chr1_1 exon 46510765 46510824 46510765 ID=Msa0024240-mRNA-1:exon:13247;Parent=Msa0024240-mRNA-1
chr1_1 exon 46510934 46511842 46510934 ID=Msa0024240-mRNA-1:exon:13248;Parent=Msa0024240-mRNA-1
chr1_1 five_prime_UTR 46496470 46496616 46496470 ID=Msa0024240-mRNA-1:five_prime_utr;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46496617 46496660 46496617 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46498929 46499403 46498929 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46501600 46501691 46501600 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46502251 46502415 46502251 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46502534 46502921 46502534 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46503514 46503632 46503514 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46503719 46503778 46503719 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46503910 46503982 46503910 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46504066 46504283 46504066 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46504372 46504416 46504372 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46505572 46505665 46505572 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46505884 46506075 46505884 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46507058 46507161 46507058 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46507285 46507372 46507285 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46508741 46508887 46508741 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46509324 46509449 46509324 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46509694 46509864 46509694 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46510765 46510824 46510765 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 CDS 46510934 46511053 46510934 ID=Msa0024240-mRNA-1:cds;Parent=Msa0024240-mRNA-1
chr1_1 three_prime_UTR 46511054 46511842 46511054 ID=Msa0024240-mRNA-1:three_prime_utr;Parent=Msa0024240-mRNA-1
Gene Sequence

>Msa0024240

ATGGCAGTTAAATCTCATAGCACCAATAATTTTCTTCCGTTAAGCTCCTCGAATTGCTGCCTTTCGAATGGTTCCACAAGTGTAGGGAGAAAAGTGTCAGACTTGCATTGCCTACTATTTAGTAAATGGGGCAGTTCAAGAAAGGGATGCCTTATTCAACATGATTTGTCCTCGAGCAGTGGTCAAGGTCCTGTGAGCTGTAGAAAACACTATTTTACATTTTCTAAGACGGGTAGGAGTGTAAATTTGCTTCCATTTGCTACCTCTGATGATGGTATGACTGTCAACGGGAGTCCACAAGCTGACGCCAGTGCTAACCTTGAAAAAATGAGGGTGAAATTGAATAGCTCTCTTGAAGATGAAGACTTTTATGATGGACTTGTTCAAGCTTTATATGATGCAGCCAGGGTTTTTGAGCTAGCAATTAAAGACCATAAATCGTCATCACGTGGATCCTGGTTTTCAACAGCTTGGCTTGGGGTAGACCAAACCGCATGGGTGAAGGCATTGTCATGTCAGGCTGCCGTGTACTCCTTATTATATGCTGCAAGTGAAATTTCATCCCGAGATGATAGCAGAGATAGAAATGTCAATGTATTTGTTCAAAGGAGTTTGCTAAGGCTATCTGCTCCCTTGGAGAGCTTAATCAGAGAAAACTTATCTGCCAAACAGCCTGAAGTGTACGAATGGTTTTGGTCTGAGCAAGTTCCAGCTGTAGTGACGTCCTTTGTTAATAAGTTTGAAGGGGACGGGCGCTTCACTTCTGCCATTGCTTTGTCTGAAAAAACTAAGGGTTTGAGCAGTGCAAGTGATGTATCACTTCTCCTGCTTGCACTTACATGCATTGCTGCAATTGCTAAACTTGGCCCGGCAAAAGTTTCTTGCTCACAATTCTTTTCCATGAGCACTGAGATAACTGGTAGTTTGATGGACATGCTGGTTGGTTTAATTCCTGTAAGTCAAGCTTATAATTCTATAAAGGATGTTGGTCTGCACAGAGAATTTCTTGTACATTTTGGTCCTCGAGCTGCAGCTTTTAGAGCAAACGTTGAGTGGGGTTCAGAAGAGGTTATTTTCTGGGTAAATCTGGTTCAGAAGCAGTTGCAGCAGGCTATTGATAAGGAGAAAATATGGTCAAGACTGACAACATCTGAAAGCATTGAGGTTTTGGAGAAGGATTTGGCTATATTTGGATTCTTTATTGCTTTAGGAAGAAGTACACGAACATTTCTTTTGGCAAATGGTTTCGATGGTCCCGATGATCCAATTGAAGATTTCATCAGGCCTGTGCTAGTTGTACTGCTAGCATTTGGTCAGATGATTGTATATATAGGTGTTTTAAGGTATCTTATTGGGGGAAGTGTTTTATACTACCCACAACTCTCATCCATTAGTTCATATCAATTGTATGTTGAGGTAGTTTGTGAAGAGCTGGATTGGCTTCCTTTTTATCCGGGAATCACCAGCATCACAAAACAGTCTCATGGGCATAGTAAACCAGAAGGTCCTCCAAATGCAGAAGCAGTGACCCAAGCATTTGCTGTTTGCTCTTATTGGATGCAGAGCTTTATTAAATACAGCACATGGCTTGAGAGTCCTTCAAATGTAAAAGCAGCTGAATTTCTGTCCAGAGGGCACAACAAGTTGATGGAGTGCATGGATGAACTTGGGATGATAAAAGATAAGACATTGGAGACTGATGCCAAGAAAATAGTTGACGGGCAAAGATCCACAATTCAGTCAACGATAAAAGACTCGGGTTCTTTTGATGAGGCATTAAAAAGTGTCGAAGAAGCTGTGATAAAGCTTGAAAAGTTGCTTCAAGAATTGCATGTGTCAAGCTCTAGTTCTGGAAAGGAGCATTTGAAAGCAGCCTGTTCTGACTTGGAAAAAATACGGAAACTTAAGAAAGAAGCTGAATTCCTGGAGGCATCTTTCCGAGCAAAAGCTGATTCTCTGCAAGAGGGAGTTAATAGTGATCAAACCATCACACCGGTTGGTGAGGAGGACAGGTTTATGAAAGGGAAAAGCAGAAAGAATGACAATGTAAAGGTGGACAGGAGCAAAAGACAAATTGGAAAATCTCGTGGATTCTGGAGCATATTTGTACCTCCTATACCCAGAAAGCCCGACCCGGAACCTGATGTGGATGCTCATGAAAATTATATTGAACAGCCTGCACCAAATGTAGGGGTTGTGGACCAAGAACCCAATGAAATCCTTCGCTTTGAGCTTCTAAGAAATGAGCTGATGGAACTTGAGAAAAGGGTCCAAAGAAGTGCCTATCAGTCAGAAAATAATGAGGATTTGATGATCAGTGATGATGGTGCCCGTTATAACGGTGATGCTGGAGGTGTTCAGATGGTCAGAGTTCAGAAGAATGAAAATTTCATACAGAAATCTTTTGACAAACTAAAAGAAACGGGAACGGATGTCTTGCAAGGAACTCAACTTCTTGCTATTGATGTTGGTGCTGCCTCGGGTTTGGTCAAAAGGACCTTGATAGGTGATGAATTGACTGAGAAGGAGAAGAAAGCACTTAAAAGAACCTTAACTGACATGGCTTCAGTTGTTCCTATCGGCATTTTAATGCTTCTTCCTGTTACTGCCGTTGGGCATGCAGCAATGTTGGCTGCCATTCAGAGATATGTACCATCCCTGATTCCATCCACTTATGCACCAGAAAGGTTGGATCTCTTGAGGCAGCTTGAGAAAGTGAAACAAATGTCAATGTCAACCAGTGATGTAGATTCAGATGATGAAATGGATGAAGTTAAATGA
Protein sequence

>Msa0024240

MAVKSHSTNNFLPLSSSNCCLSNGSTSVGRKVSDLHCLLFSKWGSSRKGCLIQHDLSSSSGQGPVSCRKHYFTFSKTGRSVNLLPFATSDDGMTVNGSPQADASANLEKMRVKLNSSLEDEDFYDGLVQALYDAARVFELAIKDHKSSSRGSWFSTAWLGVDQTAWVKALSCQAAVYSLLYAASEISSRDDSRDRNVNVFVQRSLLRLSAPLESLIRENLSAKQPEVYEWFWSEQVPAVVTSFVNKFEGDGRFTSAIALSEKTKGLSSASDVSLLLLALTCIAAIAKLGPAKVSCSQFFSMSTEITGSLMDMLVGLIPVSQAYNSIKDVGLHREFLVHFGPRAAAFRANVEWGSEEVIFWVNLVQKQLQQAIDKEKIWSRLTTSESIEVLEKDLAIFGFFIALGRSTRTFLLANGFDGPDDPIEDFIRPVLVVLLAFGQMIVYIGVLRYLIGGSVLYYPQLSSISSYQLYVEVVCEELDWLPFYPGITSITKQSHGHSKPEGPPNAEAVTQAFAVCSYWMQSFIKYSTWLESPSNVKAAEFLSRGHNKLMECMDELGMIKDKTLETDAKKIVDGQRSTIQSTIKDSGSFDEALKSVEEAVIKLEKLLQELHVSSSSSGKEHLKAACSDLEKIRKLKKEAEFLEASFRAKADSLQEGVNSDQTITPVGEEDRFMKGKSRKNDNVKVDRSKRQIGKSRGFWSIFVPPIPRKPDPEPDVDAHENYIEQPAPNVGVVDQEPNEILRFELLRNELMELEKRVQRSAYQSENNEDLMISDDGARYNGDAGGVQMVRVQKNENFIQKSFDKLKETGTDVLQGTQLLAIDVGAASGLVKRTLIGDELTEKEKKALKRTLTDMASVVPIGILMLLPVTAVGHAAMLAAIQRYVPSLIPSTYAPERLDLLRQLEKVKQMSMSTSDVDSDDEMDEVK*