Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462500 | XP_013460705.1 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 522 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462500 | sp|Q9LHT0|TRNHF_ARATH | 69.380 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 6.73e-137 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462500 | A0A072UY55 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 522 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa1462500 | 0.805778 | 1.132833e-49 | -8.615850e-47 |
| Msa0017940 | Msa1462500 | 0.812264 | 4.627495e-51 | -8.615850e-47 |
| Msa0024680 | Msa1462500 | 0.811440 | 6.994170e-51 | -8.615850e-47 |
| Msa0027540 | Msa1462500 | 0.836537 | 8.828023e-57 | -8.615850e-47 |
| Msa0030730 | Msa1462500 | 0.819391 | 1.190667e-52 | -8.615850e-47 |
| Msa0032120 | Msa1462500 | 0.802448 | 5.584511e-49 | -8.615850e-47 |
| Msa0044710 | Msa1462500 | 0.817513 | 3.171886e-52 | -8.615850e-47 |
| Msa0048020 | Msa1462500 | 0.815747 | 7.891921e-52 | -8.615850e-47 |
| Msa0050580 | Msa1462500 | 0.808062 | 3.724114e-50 | -8.615850e-47 |
| Msa0060350 | Msa1462500 | 0.809857 | 1.537852e-50 | -8.615850e-47 |
| Msa0068700 | Msa1462500 | -0.807417 | 5.105574e-50 | -8.615850e-47 |
| Msa0073820 | Msa1462500 | 0.809464 | 1.867938e-50 | -8.615850e-47 |
| Msa0075310 | Msa1462500 | 0.837535 | 4.908994e-57 | -8.615850e-47 |
| Msa0084680 | Msa1462500 | 0.836477 | 9.145089e-57 | -8.615850e-47 |
| Msa0091480 | Msa1462500 | 0.838935 | 2.139283e-57 | -8.615850e-47 |
| Msa1354040 | Msa1462500 | 0.802138 | 6.468195e-49 | -8.615850e-47 |
| Msa1379990 | Msa1462500 | 0.816364 | 5.744432e-52 | -8.615850e-47 |
| Msa1382310 | Msa1462500 | 0.802715 | 4.919523e-49 | -8.615850e-47 |
| Msa1385900 | Msa1462500 | 0.817278 | 3.583145e-52 | -8.615850e-47 |
| Msa1389470 | Msa1462500 | 0.809975 | 1.450491e-50 | -8.615850e-47 |
| Msa1391370 | Msa1462500 | 0.812579 | 3.950030e-51 | -8.615850e-47 |
| Msa1398480 | Msa1462500 | 0.810190 | 1.304082e-50 | -8.615850e-47 |
| Msa1412520 | Msa1462500 | 0.812306 | 4.529729e-51 | -8.615850e-47 |
| Msa1418200 | Msa1462500 | 0.825236 | 5.232042e-54 | -8.615850e-47 |
| Msa1444450 | Msa1462500 | 0.811287 | 7.551647e-51 | -8.615850e-47 |
| Msa1445100 | Msa1462500 | 0.800177 | 1.628886e-48 | -8.615850e-47 |
| Msa1447230 | Msa1462500 | 0.822675 | 2.087069e-53 | -8.615850e-47 |
| Msa1449880 | Msa1462500 | 0.821287 | 4.375577e-53 | -8.615850e-47 |
| Msa1456810 | Msa1462500 | 0.800674 | 1.289893e-48 | -8.615850e-47 |
| Msa1462500 | Msa1462510 | 0.822692 | 2.067838e-53 | -8.615850e-47 |
| Msa1462500 | Msa1464560 | 0.811669 | 6.237896e-51 | -8.615850e-47 |
| Msa0605620 | Msa1462500 | 0.808370 | 3.201491e-50 | -8.615850e-47 |
| Msa0607200 | Msa1462500 | 0.830700 | 2.533198e-55 | -8.615850e-47 |
| Msa0619330 | Msa1462500 | 0.820032 | 8.496594e-53 | -8.615850e-47 |
| Msa0621610 | Msa1462500 | 0.807748 | 4.342868e-50 | -8.615850e-47 |
| Msa0629290 | Msa1462500 | 0.841893 | 3.605354e-58 | -8.615850e-47 |
| Msa0629370 | Msa1462500 | 0.809541 | 1.798087e-50 | -8.615850e-47 |
| Msa0634130 | Msa1462500 | 0.801509 | 8.705694e-49 | -8.615850e-47 |
| Msa0639370 | Msa1462500 | 0.801755 | 7.752520e-49 | -8.615850e-47 |
| Msa0642650 | Msa1462500 | 0.833489 | 5.178153e-56 | -8.615850e-47 |
| Msa0654540 | Msa1462500 | 0.825467 | 4.614564e-54 | -8.615850e-47 |
| Msa0667970 | Msa1462500 | 0.819128 | 1.366478e-52 | -8.615850e-47 |
| Msa0668090 | Msa1462500 | 0.801379 | 9.257936e-49 | -8.615850e-47 |
| Msa0669850 | Msa1462500 | 0.803988 | 2.679877e-49 | -8.615850e-47 |
| Msa0681890 | Msa1462500 | 0.822529 | 2.255663e-53 | -8.615850e-47 |
| Msa0693570 | Msa1462500 | 0.807334 | 5.317288e-50 | -8.615850e-47 |
| Msa0703760 | Msa1462500 | 0.805755 | 1.145531e-49 | -8.615850e-47 |
| Msa0707080 | Msa1462500 | 0.802344 | 5.864895e-49 | -8.615850e-47 |
| Msa0712980 | Msa1462500 | 0.824267 | 8.854933e-54 | -8.615850e-47 |
| Msa0730180 | Msa1462500 | 0.822666 | 2.096829e-53 | -8.615850e-47 |
| Msa0734660 | Msa1462500 | 0.804313 | 2.293886e-49 | -8.615850e-47 |
| Msa0746600 | Msa1462500 | 0.806603 | 7.592051e-50 | -8.615850e-47 |
| Msa0748930 | Msa1462500 | 0.803244 | 3.824616e-49 | -8.615850e-47 |
| Msa0770430 | Msa1462500 | 0.806395 | 8.400198e-50 | -8.615850e-47 |
| Msa0776220 | Msa1462500 | 0.808586 | 2.879845e-50 | -8.615850e-47 |
| Msa0780140 | Msa1462500 | 0.802627 | 5.128346e-49 | -8.615850e-47 |
| Msa0813320 | Msa1462500 | -0.818426 | 1.972055e-52 | -8.615850e-47 |
| Msa0813670 | Msa1462500 | 0.804200 | 2.420994e-49 | -8.615850e-47 |
| Msa0813720 | Msa1462500 | 0.811259 | 7.657992e-51 | -8.615850e-47 |
| Msa0135980 | Msa1462500 | 0.806386 | 8.434630e-50 | -8.615850e-47 |
| Msa0141430 | Msa1462500 | 0.821600 | 3.703804e-53 | -8.615850e-47 |
| Msa0141830 | Msa1462500 | 0.814969 | 1.175018e-51 | -8.615850e-47 |
| Msa0143970 | Msa1462500 | 0.809610 | 1.737753e-50 | -8.615850e-47 |
| Msa0149500 | Msa1462500 | 0.805590 | 1.240282e-49 | -8.615850e-47 |
| Msa0157350 | Msa1462500 | 0.801359 | 9.344294e-49 | -8.615850e-47 |
| Msa0163550 | Msa1462500 | 0.819517 | 1.114375e-52 | -8.615850e-47 |
| Msa0168100 | Msa1462500 | 0.831434 | 1.672977e-55 | -8.615850e-47 |
| Msa0172960 | Msa1462500 | -0.827411 | 1.587628e-54 | -8.615850e-47 |
| Msa0182640 | Msa1462500 | 0.801372 | 9.289064e-49 | -8.615850e-47 |
| Msa0182930 | Msa1462500 | 0.821545 | 3.814153e-53 | -8.615850e-47 |
| Msa0183610 | Msa1462500 | 0.826991 | 2.002066e-54 | -8.615850e-47 |
| Msa0183620 | Msa1462500 | 0.835260 | 1.860719e-56 | -8.615850e-47 |
| Msa0199730 | Msa1462500 | 0.828792 | 7.381534e-55 | -8.615850e-47 |
| Msa0200970 | Msa1462500 | 0.816667 | 4.912921e-52 | -8.615850e-47 |
| Msa0207000 | Msa1462500 | 0.805455 | 1.323829e-49 | -8.615850e-47 |
| Msa0208630 | Msa1462500 | 0.800841 | 1.192925e-48 | -8.615850e-47 |
| Msa0223390 | Msa1462500 | 0.829385 | 5.302190e-55 | -8.615850e-47 |
| Msa1224670 | Msa1462500 | 0.832268 | 1.041734e-55 | -8.615850e-47 |
| Msa1242330 | Msa1462500 | 0.821015 | 5.053918e-53 | -8.615850e-47 |
| Msa1249870 | Msa1462500 | 0.828361 | 9.384244e-55 | -8.615850e-47 |
| Msa1250670 | Msa1462500 | 0.803510 | 3.368389e-49 | -8.615850e-47 |
| Msa1263030 | Msa1462500 | 0.812729 | 3.662351e-51 | -8.615850e-47 |
| Msa1280120 | Msa1462500 | 0.802439 | 5.607879e-49 | -8.615850e-47 |
| Msa1280130 | Msa1462500 | 0.827257 | 1.728600e-54 | -8.615850e-47 |
| Msa1284520 | Msa1462500 | 0.823386 | 1.424595e-53 | -8.615850e-47 |
| Msa1305520 | Msa1462500 | 0.820439 | 6.855418e-53 | -8.615850e-47 |
| Msa1324000 | Msa1462500 | 0.808188 | 3.502104e-50 | -8.615850e-47 |
| Msa1337090 | Msa1462500 | 0.841983 | 3.412149e-58 | -8.615850e-47 |
| Msa0367370 | Msa1462500 | 0.814111 | 1.819554e-51 | -8.615850e-47 |
| Msa0376510 | Msa1462500 | 0.832765 | 7.843024e-56 | -8.615850e-47 |
| Msa0378080 | Msa1462500 | 0.812307 | 4.528959e-51 | -8.615850e-47 |
| Msa0411520 | Msa1462500 | 0.801285 | 9.676859e-49 | -8.615850e-47 |
| Msa0425050 | Msa1462500 | 0.839057 | 1.989992e-57 | -8.615850e-47 |
| Msa0425940 | Msa1462500 | 0.819894 | 9.139890e-53 | -8.615850e-47 |
| Msa0426020 | Msa1462500 | 0.807912 | 4.007893e-50 | -8.615850e-47 |
| Msa0426160 | Msa1462500 | 0.817399 | 3.365535e-52 | -8.615850e-47 |
| Msa0431430 | Msa1462500 | 0.864582 | 1.096405e-64 | -8.615850e-47 |
| Msa0432680 | Msa1462500 | 0.807867 | 4.097877e-50 | -8.615850e-47 |
| Msa0436460 | Msa1462500 | 0.809475 | 1.857725e-50 | -8.615850e-47 |
| Msa0461640 | Msa1462500 | 0.940043 | 4.570106e-100 | -8.615850e-47 |
| Msa0469970 | Msa1462500 | 0.832987 | 6.907086e-56 | -8.615850e-47 |
| Msa0470180 | Msa1462500 | 0.821627 | 3.652038e-53 | -8.615850e-47 |
| Msa0476320 | Msa1462500 | 0.800652 | 1.303701e-48 | -8.615850e-47 |
| Msa0480150 | Msa1462500 | 0.811749 | 5.992931e-51 | -8.615850e-47 |
| Msa0480320 | Msa1462500 | 0.807928 | 3.978237e-50 | -8.615850e-47 |
| Msa0990520 | Msa1462500 | 0.832615 | 8.545844e-56 | -8.615850e-47 |
| Msa1018790 | Msa1462500 | 0.827207 | 1.777414e-54 | -8.615850e-47 |
| Msa1038050 | Msa1462500 | 0.804058 | 2.591219e-49 | -8.615850e-47 |
| Msa1038320 | Msa1462500 | 0.812543 | 4.020312e-51 | -8.615850e-47 |
| Msa1044340 | Msa1462500 | 0.829023 | 6.490321e-55 | -8.615850e-47 |
| Msa1048330 | Msa1462500 | 0.803533 | 3.330660e-49 | -8.615850e-47 |
| Msa1073840 | Msa1462500 | 0.815865 | 7.426597e-52 | -8.615850e-47 |
| Msa1080620 | Msa1462500 | 0.802498 | 5.453230e-49 | -8.615850e-47 |
| Msa0239660 | Msa1462500 | 0.816563 | 5.184091e-52 | -8.615850e-47 |
| Msa0255990 | Msa1462500 | 0.831464 | 1.644558e-55 | -8.615850e-47 |
| Msa0259860 | Msa1462500 | -0.804856 | 1.767309e-49 | -8.615850e-47 |
| Msa0277640 | Msa1462500 | 0.815987 | 6.975583e-52 | -8.615850e-47 |
| Msa0280490 | Msa1462500 | 0.806485 | 8.040020e-50 | -8.615850e-47 |
| Msa0280900 | Msa1462500 | 0.807430 | 5.074267e-50 | -8.615850e-47 |
| Msa0288240 | Msa1462500 | 0.805802 | 1.119795e-49 | -8.615850e-47 |
| Msa0288380 | Msa1462500 | 0.800037 | 1.739066e-48 | -8.615850e-47 |
| Msa0298830 | Msa1462500 | 0.804005 | 2.658184e-49 | -8.615850e-47 |
| Msa0298940 | Msa1462500 | 0.812443 | 4.228966e-51 | -8.615850e-47 |
| Msa0298970 | Msa1462500 | 0.840977 | 6.281462e-58 | -8.615850e-47 |
| Msa0302660 | Msa1462500 | 0.810411 | 1.168469e-50 | -8.615850e-47 |
| Msa0317260 | Msa1462500 | 0.800196 | 1.614653e-48 | -8.615850e-47 |
| Msa0318250 | Msa1462500 | 0.823348 | 1.453738e-53 | -8.615850e-47 |
| Msa0318270 | Msa1462500 | 0.843146 | 1.676686e-58 | -8.615850e-47 |
| Msa0318310 | Msa1462500 | 0.841584 | 4.348850e-58 | -8.615850e-47 |
| Msa0323990 | Msa1462500 | 0.826915 | 2.087107e-54 | -8.615850e-47 |
| Msa0344640 | Msa1462500 | 0.804203 | 2.417522e-49 | -8.615850e-47 |
| Msa0352510 | Msa1462500 | 0.809760 | 1.613513e-50 | -8.615850e-47 |
| Msa1125780 | Msa1462500 | 0.816226 | 6.167709e-52 | -8.615850e-47 |
| Msa1125950 | Msa1462500 | 0.819892 | 9.145952e-53 | -8.615850e-47 |
| Msa1129560 | Msa1462500 | 0.867369 | 1.440342e-65 | -8.615850e-47 |
| Msa1129720 | Msa1462500 | 0.844891 | 5.708202e-59 | -8.615850e-47 |
| Msa1149760 | Msa1462500 | 0.807352 | 5.270814e-50 | -8.615850e-47 |
| Msa1157730 | Msa1462500 | 0.810845 | 9.411904e-51 | -8.615850e-47 |
| Msa1159100 | Msa1462500 | 0.832366 | 9.850865e-56 | -8.615850e-47 |
| Msa1171340 | Msa1462500 | 0.815132 | 1.081390e-51 | -8.615850e-47 |
| Msa1171690 | Msa1462500 | 0.824964 | 6.068453e-54 | -8.615850e-47 |
| Msa1174010 | Msa1462500 | 0.802484 | 5.488556e-49 | -8.615850e-47 |
| Msa1184730 | Msa1462500 | 0.807439 | 5.051597e-50 | -8.615850e-47 |
| Msa1188940 | Msa1462500 | 0.827798 | 1.282359e-54 | -8.615850e-47 |
| Msa1190910 | Msa1462500 | 0.806618 | 7.538462e-50 | -8.615850e-47 |
| Msa1197110 | Msa1462500 | 0.815968 | 7.041976e-52 | -8.615850e-47 |
| Msa1210770 | Msa1462500 | 0.809062 | 2.277731e-50 | -8.615850e-47 |
| Msa0482960 | Msa1462500 | 0.833913 | 4.058707e-56 | -8.615850e-47 |
| Msa0487910 | Msa1462500 | 0.808765 | 2.636929e-50 | -8.615850e-47 |
| Msa0510450 | Msa1462500 | 0.811425 | 7.048038e-51 | -8.615850e-47 |
| Msa0518040 | Msa1462500 | 0.813957 | 1.967907e-51 | -8.615850e-47 |
| Msa0520320 | Msa1462500 | 0.816537 | 5.254284e-52 | -8.615850e-47 |
| Msa0524050 | Msa1462500 | 0.827700 | 1.353716e-54 | -8.615850e-47 |
| Msa0524120 | Msa1462500 | 0.809319 | 2.006502e-50 | -8.615850e-47 |
| Msa0527590 | Msa1462500 | 0.818374 | 2.026936e-52 | -8.615850e-47 |
| Msa0527600 | Msa1462500 | 0.833113 | 6.425551e-56 | -8.615850e-47 |
| Msa0532300 | Msa1462500 | 0.837901 | 3.954449e-57 | -8.615850e-47 |
| Msa0532330 | Msa1462500 | 0.810228 | 1.279245e-50 | -8.615850e-47 |
| Msa0532840 | Msa1462500 | 0.826633 | 2.436900e-54 | -8.615850e-47 |
| Msa0533010 | Msa1462500 | 0.823476 | 1.357120e-53 | -8.615850e-47 |
| Msa0542010 | Msa1462500 | 0.803669 | 3.122312e-49 | -8.615850e-47 |
| Msa0546380 | Msa1462500 | 0.807987 | 3.864691e-50 | -8.615850e-47 |
| Msa0546740 | Msa1462500 | 0.820737 | 5.854636e-53 | -8.615850e-47 |
| Msa0563530 | Msa1462500 | 0.878521 | 2.624904e-69 | -8.615850e-47 |
| Msa0576420 | Msa1462500 | 0.814978 | 1.169681e-51 | -8.615850e-47 |
| Msa0581460 | Msa1462500 | 0.813002 | 3.190811e-51 | -8.615850e-47 |
| Msa0589150 | Msa1462500 | 0.818333 | 2.070290e-52 | -8.615850e-47 |
| Msa0591770 | Msa1462500 | 0.824758 | 6.786606e-54 | -8.615850e-47 |
| Msa0843690 | Msa1462500 | 0.816056 | 6.731537e-52 | -8.615850e-47 |
| Msa0848360 | Msa1462500 | 0.811337 | 7.363319e-51 | -8.615850e-47 |
| Msa0848380 | Msa1462500 | 0.814431 | 1.546038e-51 | -8.615850e-47 |
| Msa0872660 | Msa1462500 | 0.834001 | 3.858062e-56 | -8.615850e-47 |
| Msa0874760 | Msa1462500 | 0.832893 | 7.288452e-56 | -8.615850e-47 |
| Msa0883030 | Msa1462500 | 0.808967 | 2.387001e-50 | -8.615850e-47 |
| Msa0890250 | Msa1462500 | 0.843420 | 1.417001e-58 | -8.615850e-47 |
| Msa0901100 | Msa1462500 | 0.805603 | 1.232884e-49 | -8.615850e-47 |
| Msa0909710 | Msa1462500 | 0.825623 | 4.238488e-54 | -8.615850e-47 |
| Msa0910400 | Msa1462500 | 0.845543 | 3.803259e-59 | -8.615850e-47 |
| Msa0925160 | Msa1462500 | 0.842487 | 2.510115e-58 | -8.615850e-47 |
| Msa0937940 | Msa1462500 | 0.832150 | 1.114184e-55 | -8.615850e-47 |
| Msa0944710 | Msa1462500 | 0.800066 | 1.715832e-48 | -8.615850e-47 |
| Msa0955260 | Msa1462500 | 0.824782 | 6.697606e-54 | -8.615850e-47 |
| Msa0969400 | Msa1462500 | 0.806159 | 9.416993e-50 | -8.615850e-47 |
| Msa0970520 | Msa1462500 | 0.802814 | 4.692269e-49 | -8.615850e-47 |
| Msa0972730 | Msa1462500 | 0.813968 | 1.956089e-51 | -8.615850e-47 |
| Msa0975080 | Msa1462500 | 0.835227 | 1.897165e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462500 | MtrunA17_Chr3g0112171 | 96.310 | 271 | 10 | 0 | 1 | 271 | 1 | 271 | 0.0 | 522 |
| Msa1462500 | MtrunA17_Chr3g0112151 | 88.636 | 264 | 30 | 0 | 1 | 264 | 72 | 335 | 4.02e-175 | 486 |
| Msa1462500 | MtrunA17_Chr3g0112141 | 85.547 | 256 | 37 | 0 | 15 | 270 | 17 | 272 | 6.04e-166 | 460 |
| Msa1462500 | MtrunA17_Chr3g0112261 | 76.692 | 266 | 62 | 0 | 6 | 271 | 10 | 275 | 1.39e-155 | 434 |
| Msa1462500 | MtrunA17_Chr3g0112271 | 73.993 | 273 | 69 | 1 | 1 | 271 | 1 | 273 | 1.02e-149 | 419 |
| Msa1462500 | MtrunA17_Chr4g0032141 | 61.719 | 256 | 98 | 0 | 12 | 267 | 53 | 308 | 2.13e-124 | 356 |
| Msa1462500 | MtrunA17_Chr7g0239481 | 60.311 | 257 | 98 | 1 | 9 | 261 | 9 | 265 | 1.26e-112 | 325 |
| Msa1462500 | MtrunA17_Chr7g0239511 | 59.615 | 260 | 101 | 2 | 6 | 261 | 7 | 266 | 5.14e-110 | 318 |
| Msa1462500 | MtrunA17_Chr7g0239501 | 60.385 | 260 | 99 | 2 | 6 | 261 | 7 | 266 | 7.73e-109 | 315 |
| Msa1462500 | MtrunA17_Chr7g0239491 | 57.795 | 263 | 108 | 1 | 1 | 260 | 1 | 263 | 2.09e-108 | 314 |
| Msa1462500 | MtrunA17_Chr7g0239451 | 58.687 | 259 | 103 | 1 | 6 | 260 | 7 | 265 | 8.25e-106 | 308 |
| Msa1462500 | MtrunA17_Chr4g0032181 | 59.052 | 232 | 95 | 0 | 31 | 262 | 17 | 248 | 7.91e-104 | 302 |
| Msa1462500 | MtrunA17_Chr7g0239461 | 50.775 | 258 | 75 | 3 | 6 | 260 | 7 | 215 | 4.66e-81 | 243 |
| Msa1462500 | MtrunA17_Chr3g0112321 | 59.596 | 99 | 24 | 2 | 147 | 242 | 2 | 87 | 5.65e-33 | 115 |
| Msa1462500 | MtrunA17_Chr4g0075531 | 32.114 | 246 | 162 | 4 | 15 | 259 | 7 | 248 | 1.39e-32 | 120 |
| Msa1462500 | MtrunA17_Chr3g0122901 | 30.488 | 246 | 160 | 6 | 21 | 261 | 81 | 320 | 1.62e-30 | 116 |
| Msa1462500 | MtrunA17_Chr7g0259521 | 32.400 | 250 | 153 | 9 | 20 | 259 | 11 | 254 | 1.04e-28 | 110 |
| Msa1462500 | MtrunA17_Chr3g0112161 | 55.752 | 113 | 20 | 2 | 123 | 234 | 1 | 84 | 1.71e-28 | 104 |
| Msa1462500 | MtrunA17_Chr7g0259531 | 33.068 | 251 | 150 | 9 | 20 | 259 | 16 | 259 | 3.60e-28 | 108 |
| Msa1462500 | MtrunA17_Chr4g0028911 | 30.651 | 261 | 168 | 9 | 14 | 264 | 10 | 267 | 2.89e-27 | 106 |
| Msa1462500 | MtrunA17_Chr7g0244061 | 31.560 | 282 | 155 | 8 | 8 | 260 | 22 | 294 | 4.80e-27 | 106 |
| Msa1462500 | MtrunA17_Chr4g0028921 | 29.730 | 259 | 171 | 7 | 15 | 264 | 11 | 267 | 2.96e-26 | 103 |
| Msa1462500 | MtrunA17_Chr7g0252031 | 30.216 | 278 | 172 | 8 | 1 | 260 | 14 | 287 | 4.68e-23 | 95.9 |
| Msa1462500 | MtrunA17_Chr4g0026001 | 30.502 | 259 | 163 | 10 | 15 | 264 | 14 | 264 | 2.76e-22 | 93.2 |
| Msa1462500 | MtrunA17_Chr4g0074511 | 31.154 | 260 | 161 | 8 | 15 | 262 | 40 | 293 | 7.72e-22 | 92.4 |
| Msa1462500 | MtrunA17_Chr4g0044131 | 30.739 | 257 | 158 | 9 | 15 | 260 | 8 | 255 | 1.17e-21 | 91.7 |
| Msa1462500 | MtrunA17_Chr0c30g0494101 | 31.418 | 261 | 157 | 9 | 15 | 262 | 40 | 291 | 2.95e-21 | 90.9 |
| Msa1462500 | MtrunA17_Chr7g0268591 | 28.016 | 257 | 159 | 7 | 20 | 260 | 38 | 284 | 2.79e-20 | 88.2 |
| Msa1462500 | MtrunA17_Chr3g0084871 | 31.136 | 273 | 165 | 11 | 3 | 260 | 6 | 270 | 4.78e-20 | 87.0 |
| Msa1462500 | MtrunA17_Chr8g0357481 | 28.125 | 256 | 169 | 6 | 15 | 259 | 14 | 265 | 2.12e-19 | 85.9 |
| Msa1462500 | MtrunA17_Chr7g0272961 | 30.739 | 257 | 165 | 8 | 15 | 262 | 40 | 292 | 2.36e-19 | 85.5 |
| Msa1462500 | MtrunA17_Chr1g0182511 | 31.349 | 252 | 154 | 9 | 20 | 259 | 19 | 263 | 2.98e-19 | 84.7 |
| Msa1462500 | MtrunA17_Chr6g0459301 | 29.323 | 266 | 173 | 8 | 4 | 259 | 2 | 262 | 3.07e-19 | 84.7 |
| Msa1462500 | MtrunA17_Chr6g0459261 | 27.925 | 265 | 177 | 7 | 4 | 259 | 14 | 273 | 7.63e-19 | 84.0 |
| Msa1462500 | MtrunA17_Chr7g0266981 | 28.417 | 278 | 177 | 10 | 4 | 270 | 2 | 268 | 1.04e-18 | 83.6 |
| Msa1462500 | MtrunA17_Chr4g0025971 | 28.235 | 255 | 174 | 8 | 15 | 264 | 14 | 264 | 1.23e-18 | 83.2 |
| Msa1462500 | MtrunA17_Chr4g0044111 | 28.058 | 278 | 178 | 10 | 4 | 270 | 2 | 268 | 1.96e-18 | 82.8 |
| Msa1462500 | MtrunA17_Chr4g0025981 | 27.612 | 268 | 162 | 7 | 16 | 264 | 42 | 296 | 2.25e-18 | 83.2 |
| Msa1462500 | MtrunA17_Chr4g0040371 | 29.304 | 273 | 169 | 10 | 3 | 260 | 8 | 271 | 8.45e-18 | 81.3 |
| Msa1462500 | MtrunA17_Chr1g0191751 | 27.907 | 258 | 173 | 7 | 15 | 263 | 101 | 354 | 1.49e-17 | 81.3 |
| Msa1462500 | MtrunA17_Chr6g0459351 | 28.464 | 267 | 173 | 9 | 4 | 259 | 2 | 261 | 9.46e-17 | 77.8 |
| Msa1462500 | MtrunA17_Chr6g0459271 | 28.302 | 265 | 176 | 7 | 4 | 259 | 2 | 261 | 1.03e-16 | 77.8 |
| Msa1462500 | MtrunA17_Chr1g0171831 | 25.410 | 244 | 168 | 8 | 21 | 251 | 20 | 262 | 1.26e-16 | 77.4 |
| Msa1462500 | MtrunA17_Chr7g0267011 | 30.645 | 186 | 122 | 5 | 15 | 197 | 8 | 189 | 1.31e-16 | 76.3 |
| Msa1462500 | MtrunA17_Chr6g0459331 | 27.376 | 263 | 181 | 7 | 4 | 259 | 2 | 261 | 7.27e-16 | 75.5 |
| Msa1462500 | MtrunA17_Chr7g0267001 | 27.059 | 255 | 152 | 8 | 15 | 260 | 8 | 237 | 9.03e-16 | 75.1 |
| Msa1462500 | MtrunA17_Chr6g0459281 | 27.473 | 273 | 180 | 9 | 4 | 265 | 2 | 267 | 2.25e-15 | 73.9 |
| Msa1462500 | MtrunA17_Chr7g0266891 | 26.592 | 267 | 174 | 10 | 15 | 270 | 7 | 262 | 3.47e-15 | 73.6 |
| Msa1462500 | MtrunA17_Chr8g0355281 | 27.350 | 234 | 142 | 8 | 15 | 233 | 69 | 289 | 5.07e-15 | 73.9 |
| Msa1462500 | MtrunA17_Chr8g0381191 | 30.348 | 201 | 131 | 5 | 20 | 213 | 50 | 248 | 6.94e-15 | 73.2 |
| Msa1462500 | MtrunA17_Chr2g0324021 | 26.692 | 266 | 184 | 7 | 11 | 269 | 2 | 263 | 1.01e-14 | 72.0 |
| Msa1462500 | MtrunA17_Chr4g0076931 | 31.138 | 167 | 112 | 2 | 21 | 184 | 12 | 178 | 1.71e-14 | 71.2 |
| Msa1462500 | MtrunA17_Chr7g0270451 | 27.969 | 261 | 180 | 7 | 12 | 267 | 3 | 260 | 2.13e-14 | 71.2 |
| Msa1462500 | MtrunA17_Chr7g0270441 | 26.255 | 259 | 178 | 7 | 11 | 261 | 2 | 255 | 6.79e-14 | 69.7 |
| Msa1462500 | MtrunA17_Chr6g0466681 | 30.622 | 209 | 121 | 6 | 15 | 205 | 64 | 266 | 1.17e-12 | 67.0 |
| Msa1462500 | MtrunA17_Chr6g0485711 | 23.643 | 258 | 158 | 8 | 19 | 243 | 182 | 433 | 7.70e-12 | 65.1 |
| Msa1462500 | MtrunA17_Chr3g0131521 | 33.784 | 148 | 95 | 3 | 8 | 154 | 25 | 170 | 1.75e-11 | 63.5 |
| Msa1462500 | MtrunA17_Chr7g0249571 | 26.111 | 180 | 129 | 3 | 22 | 197 | 45 | 224 | 2.00e-11 | 63.2 |
| Msa1462500 | MtrunA17_Chr3g0124471 | 26.761 | 213 | 142 | 4 | 21 | 232 | 32 | 231 | 6.09e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462500 | AT5G06060.1 | 69.380 | 258 | 79 | 0 | 12 | 269 | 6 | 263 | 6.85e-138 | 389 |
| Msa1462500 | AT2G29290.2 | 60.311 | 257 | 100 | 1 | 12 | 266 | 4 | 260 | 1.29e-118 | 340 |
| Msa1462500 | AT2G29260.1 | 61.176 | 255 | 99 | 0 | 12 | 266 | 65 | 319 | 3.30e-117 | 339 |
| Msa1462500 | AT2G29150.1 | 60.000 | 265 | 104 | 2 | 1 | 264 | 1 | 264 | 5.13e-115 | 331 |
| Msa1462500 | AT2G29360.1 | 59.004 | 261 | 107 | 0 | 4 | 264 | 5 | 265 | 7.56e-115 | 331 |
| Msa1462500 | AT1G07440.1 | 59.701 | 268 | 102 | 3 | 1 | 266 | 1 | 264 | 1.25e-114 | 330 |
| Msa1462500 | AT2G29350.1 | 59.091 | 264 | 107 | 1 | 1 | 264 | 1 | 263 | 7.65e-114 | 328 |
| Msa1462500 | AT1G07450.1 | 59.289 | 253 | 102 | 1 | 12 | 264 | 5 | 256 | 8.17e-111 | 320 |
| Msa1462500 | AT2G29330.1 | 60.465 | 258 | 98 | 3 | 12 | 266 | 4 | 260 | 4.80e-110 | 318 |
| Msa1462500 | AT2G29340.2 | 57.143 | 259 | 109 | 1 | 12 | 268 | 4 | 262 | 5.63e-109 | 316 |
| Msa1462500 | AT2G29340.1 | 57.588 | 257 | 107 | 1 | 12 | 266 | 4 | 260 | 2.26e-108 | 316 |
| Msa1462500 | AT2G30670.1 | 58.498 | 253 | 105 | 0 | 12 | 264 | 4 | 256 | 7.43e-108 | 313 |
| Msa1462500 | AT2G29370.1 | 54.789 | 261 | 118 | 0 | 4 | 264 | 5 | 265 | 2.11e-107 | 312 |
| Msa1462500 | AT2G29320.1 | 58.366 | 257 | 104 | 2 | 13 | 266 | 11 | 267 | 3.68e-105 | 306 |
| Msa1462500 | AT2G29310.1 | 56.917 | 253 | 109 | 0 | 12 | 264 | 4 | 256 | 9.34e-105 | 305 |
| Msa1462500 | AT2G29290.1 | 58.403 | 238 | 97 | 1 | 31 | 266 | 6 | 243 | 1.05e-104 | 304 |
| Msa1462500 | AT2G29300.1 | 56.589 | 258 | 109 | 2 | 12 | 266 | 4 | 261 | 9.29e-103 | 300 |
| Msa1462500 | AT2G29300.2 | 56.400 | 250 | 108 | 1 | 12 | 260 | 4 | 253 | 5.81e-99 | 291 |
| Msa1462500 | AT2G29350.3 | 59.111 | 225 | 91 | 1 | 40 | 264 | 2 | 225 | 1.12e-96 | 283 |
| Msa1462500 | AT2G29320.2 | 57.741 | 239 | 98 | 2 | 31 | 266 | 11 | 249 | 4.58e-95 | 280 |
| Msa1462500 | AT2G29310.2 | 55.983 | 234 | 103 | 0 | 31 | 264 | 21 | 254 | 3.18e-93 | 276 |
| Msa1462500 | AT2G29350.2 | 60.294 | 204 | 81 | 0 | 1 | 204 | 1 | 204 | 8.42e-89 | 263 |
| Msa1462500 | AT2G29340.3 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 6.04e-80 | 240 |
| Msa1462500 | AT2G29340.4 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 6.04e-80 | 240 |
| Msa1462500 | AT2G29310.3 | 56.061 | 198 | 87 | 0 | 12 | 209 | 4 | 201 | 5.90e-78 | 235 |
| Msa1462500 | AT2G29320.3 | 58.639 | 191 | 78 | 1 | 13 | 202 | 11 | 201 | 3.69e-77 | 233 |
| Msa1462500 | AT1G07440.2 | 58.140 | 172 | 69 | 1 | 1 | 172 | 1 | 169 | 9.72e-68 | 208 |
| Msa1462500 | AT2G29310.4 | 54.749 | 179 | 81 | 0 | 31 | 209 | 21 | 199 | 3.87e-66 | 205 |
| Msa1462500 | AT2G29170.1 | 57.843 | 102 | 42 | 1 | 1 | 101 | 1 | 102 | 9.09e-35 | 121 |
| Msa1462500 | AT4G05530.1 | 32.520 | 246 | 161 | 5 | 15 | 259 | 9 | 250 | 1.09e-32 | 120 |
| Msa1462500 | AT5G18210.1 | 32.950 | 261 | 160 | 7 | 10 | 259 | 3 | 259 | 3.72e-31 | 117 |
| Msa1462500 | AT3G03980.1 | 30.855 | 269 | 167 | 7 | 6 | 259 | 5 | 269 | 1.02e-29 | 113 |
| Msa1462500 | AT1G24360.1 | 30.364 | 247 | 159 | 7 | 21 | 261 | 80 | 319 | 6.52e-29 | 112 |
| Msa1462500 | AT4G13180.1 | 32.819 | 259 | 164 | 8 | 10 | 261 | 8 | 263 | 1.05e-28 | 110 |
| Msa1462500 | AT5G18210.2 | 32.234 | 273 | 156 | 9 | 10 | 271 | 3 | 257 | 2.68e-27 | 107 |
| Msa1462500 | AT3G46170.1 | 29.457 | 258 | 171 | 7 | 15 | 263 | 26 | 281 | 3.63e-25 | 101 |
| Msa1462500 | AT3G55310.1 | 30.116 | 259 | 168 | 9 | 15 | 263 | 17 | 272 | 1.17e-24 | 100 |
| Msa1462500 | AT1G54870.2 | 33.852 | 257 | 157 | 8 | 15 | 262 | 84 | 336 | 1.60e-24 | 100 |
| Msa1462500 | AT1G54870.1 | 33.852 | 257 | 157 | 8 | 15 | 262 | 82 | 334 | 1.82e-24 | 100 |
| Msa1462500 | AT3G55290.1 | 29.344 | 259 | 170 | 9 | 15 | 263 | 18 | 273 | 4.78e-24 | 98.6 |
| Msa1462500 | AT3G55290.2 | 29.344 | 259 | 170 | 9 | 15 | 263 | 17 | 272 | 5.20e-24 | 98.2 |
| Msa1462500 | AT1G63380.3 | 28.571 | 259 | 173 | 8 | 15 | 263 | 15 | 271 | 1.13e-23 | 97.4 |
| Msa1462500 | AT1G63380.1 | 28.571 | 259 | 173 | 8 | 15 | 263 | 17 | 273 | 1.17e-23 | 97.4 |
| Msa1462500 | AT1G63380.4 | 28.571 | 259 | 173 | 8 | 15 | 263 | 19 | 275 | 1.20e-23 | 97.4 |
| Msa1462500 | AT1G63380.2 | 28.571 | 259 | 173 | 8 | 15 | 263 | 22 | 278 | 1.74e-23 | 97.1 |
| Msa1462500 | AT1G62610.3 | 28.185 | 259 | 174 | 8 | 15 | 263 | 15 | 271 | 1.87e-23 | 96.7 |
| Msa1462500 | AT1G62610.1 | 28.185 | 259 | 174 | 8 | 15 | 263 | 14 | 270 | 1.89e-23 | 96.7 |
| Msa1462500 | AT1G62610.2 | 28.185 | 259 | 174 | 8 | 15 | 263 | 13 | 269 | 1.96e-23 | 96.7 |
| Msa1462500 | AT1G62610.4 | 28.185 | 259 | 174 | 8 | 15 | 263 | 19 | 275 | 1.96e-23 | 96.7 |
| Msa1462500 | AT3G05260.1 | 33.208 | 265 | 165 | 7 | 6 | 262 | 28 | 288 | 2.88e-23 | 96.7 |
| Msa1462500 | AT2G17845.1 | 28.897 | 263 | 171 | 9 | 15 | 264 | 47 | 306 | 1.08e-22 | 95.5 |
| Msa1462500 | AT3G04000.1 | 31.734 | 271 | 165 | 8 | 4 | 258 | 3 | 269 | 1.08e-22 | 94.7 |
| Msa1462500 | AT3G26760.1 | 29.323 | 266 | 170 | 7 | 8 | 260 | 30 | 290 | 2.25e-21 | 91.7 |
| Msa1462500 | AT3G51680.1 | 33.166 | 199 | 123 | 5 | 15 | 205 | 32 | 228 | 3.63e-21 | 90.9 |
| Msa1462500 | AT2G47120.1 | 28.947 | 266 | 169 | 13 | 11 | 267 | 2 | 256 | 1.13e-19 | 86.3 |
| Msa1462500 | AT2G47120.2 | 29.008 | 262 | 166 | 13 | 15 | 267 | 7 | 257 | 1.85e-19 | 85.5 |
| Msa1462500 | AT3G12800.1 | 26.070 | 257 | 174 | 7 | 15 | 259 | 10 | 262 | 2.53e-19 | 85.9 |
| Msa1462500 | AT4G03140.1 | 26.562 | 256 | 174 | 6 | 15 | 260 | 78 | 329 | 1.59e-18 | 84.3 |
| Msa1462500 | AT1G52340.1 | 29.278 | 263 | 164 | 8 | 15 | 260 | 18 | 275 | 1.66e-18 | 83.6 |
| Msa1462500 | AT2G47130.1 | 29.457 | 258 | 169 | 9 | 11 | 261 | 2 | 253 | 1.33e-17 | 80.5 |
| Msa1462500 | AT5G04900.1 | 29.778 | 225 | 141 | 8 | 18 | 233 | 80 | 296 | 2.21e-16 | 78.2 |
| Msa1462500 | AT1G10310.1 | 33.939 | 165 | 106 | 3 | 21 | 184 | 21 | 183 | 5.81e-15 | 72.8 |
| Msa1462500 | AT4G13250.1 | 25.581 | 258 | 153 | 8 | 19 | 243 | 163 | 414 | 5.75e-14 | 72.0 |
| Msa1462500 | AT3G42960.1 | 28.794 | 257 | 159 | 9 | 20 | 260 | 13 | 261 | 6.90e-14 | 70.5 |
| Msa1462500 | AT2G47140.1 | 27.843 | 255 | 170 | 8 | 15 | 261 | 6 | 254 | 1.04e-13 | 69.7 |
| Msa1462500 | AT5G10050.1 | 26.291 | 213 | 143 | 4 | 21 | 232 | 11 | 210 | 1.48e-13 | 69.3 |
| Msa1462500 | AT5G65205.1 | 30.000 | 180 | 115 | 5 | 21 | 197 | 12 | 183 | 2.02e-13 | 69.3 |
| Msa1462500 | AT3G26770.1 | 25.940 | 266 | 175 | 7 | 15 | 264 | 41 | 300 | 5.67e-13 | 68.2 |
| Msa1462500 | AT4G09750.1 | 30.622 | 209 | 121 | 6 | 15 | 205 | 41 | 243 | 1.50e-12 | 67.0 |
| Msa1462500 | AT3G06060.1 | 25.743 | 202 | 143 | 2 | 9 | 207 | 31 | 228 | 4.75e-12 | 65.5 |
| Msa1462500 | AT3G06060.2 | 25.743 | 202 | 143 | 2 | 9 | 207 | 48 | 245 | 6.06e-12 | 65.5 |
| Msa1462500 | AT3G47350.2 | 26.540 | 211 | 140 | 7 | 20 | 221 | 49 | 253 | 2.75e-11 | 63.2 |
| Msa1462500 | AT3G47350.1 | 26.540 | 211 | 140 | 7 | 20 | 221 | 49 | 253 | 3.57e-11 | 62.8 |
| Msa1462500 | AT3G03330.1 | 26.904 | 197 | 139 | 3 | 6 | 197 | 32 | 228 | 3.71e-11 | 62.8 |
Find 73 sgRNAs with CRISPR-Local
Find 174 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAAATGTTCCATTCTTAT+TGG | 0.204160 | tig0042325:-8689 | Msa1462500:three_prime_UTR |
| AAAATCACATCCGGTGTATT+AGG | 0.248415 | tig0042325:+8886 | Msa1462500:intergenic |
| TAAACGACGTCGTTGGTTCT+TGG | 0.258910 | tig0042325:-11474 | Msa1462500:five_prime_UTR |
| CCACAGTTTACACTTGTTCT+AGG | 0.259656 | tig0042325:-11270 | Msa1462500:CDS |
| TTGTCAAGTTCTGATTAAAT+AGG | 0.323093 | tig0042325:-8793 | Msa1462500:three_prime_UTR |
| CATCCTCTGCTTAAAGAATC+TGG | 0.325649 | tig0042325:-10792 | Msa1462500:CDS |
| AATGGGCGAAAGACAATATA+AGG | 0.356013 | tig0042325:-10564 | Msa1462500:CDS |
| GGACAGATTGTTTCTGTTGA+TGG | 0.357615 | tig0042325:-8950 | Msa1462500:CDS |
| GGTTCTGCTATACGCTTTAT+CGG | 0.380929 | tig0042325:+9031 | Msa1462500:intergenic |
| ATAGGATCTGGCTTTCAGTT+TGG | 0.381147 | tig0042325:-8775 | Msa1462500:three_prime_UTR |
| CTCCCTACTCAACACAATAA+TGG | 0.387753 | tig0042325:-8819 | Msa1462500:three_prime_UTR |
| GTTGAAGAACTCGCTGAGTT+TGG | 0.389672 | tig0042325:-11295 | Msa1462500:CDS |
| TGATCTTGATCCAATAAGAA+TGG | 0.394831 | tig0042325:+8679 | Msa1462500:intergenic |
| CTGCTTAAAGAATCTGGAAA+TGG | 0.406314 | tig0042325:-10786 | Msa1462500:CDS |
| GAACAAAGGAATTCAATGTT+TGG | 0.411239 | tig0042325:-8631 | Msa1462500:three_prime_UTR |
| GAAGCCAACAATTGAGTATA+CGG | 0.419549 | tig0042325:-10880 | Msa1462500:CDS |
| CGAGAGCGTTGAATCCTTTG+AGG | 0.442296 | tig0042325:+11353 | Msa1462500:intergenic |
| ACCGGCGGAACGCGTGGAAT+CGG | 0.443421 | tig0042325:-11328 | Msa1462500:CDS |
| GATGGAGGATTTACTGTGAA+TGG | 0.451398 | tig0042325:-8932 | Msa1462500:CDS |
| AGTTCTGATTAAATAGGATC+TGG | 0.454723 | tig0042325:-8787 | Msa1462500:three_prime_UTR |
| TCAGCCGTATACTCAATTGT+TGG | 0.456707 | tig0042325:+10876 | Msa1462500:intergenic |
| TCTCTCACAAGCATAGGTTC+TGG | 0.458121 | tig0042325:-10735 | Msa1462500:CDS |
| TGCATACCATCTATGTCAAT+TGG | 0.460251 | tig0042325:-10817 | Msa1462500:CDS |
| TGAAATTAGGTGAACAATGC+TGG | 0.465684 | tig0042325:-10915 | Msa1462500:intron |
| AGCGTTTATTCAGCTCCTCT+TGG | 0.468728 | tig0042325:+11245 | Msa1462500:intergenic |
| GAAAGTGATGACTACTAACT+TGG | 0.480086 | tig0042325:-10844 | Msa1462500:CDS |
| ATACCATTATTGTGTTGAGT+AGG | 0.487298 | tig0042325:+8816 | Msa1462500:intergenic |
| CTCGTCACCGGCGGAACGCG+TGG | 0.489333 | tig0042325:-11334 | Msa1462500:CDS |
| TCCGATTCCACGCGTTCCGC+CGG | 0.497124 | tig0042325:+11327 | Msa1462500:intergenic |
| GTATTAGGTAATCCTCATGC+TGG | 0.506409 | tig0042325:+8901 | Msa1462500:intergenic |
| TACCATTATTGTGTTGAGTA+GGG | 0.511090 | tig0042325:+8817 | Msa1462500:intergenic |
| CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | tig0042325:-8971 | Msa1462500:CDS |
| GGATTCAACGCTCTCGTCAC+CGG | 0.529505 | tig0042325:-11346 | Msa1462500:CDS |
| ACCACATGAAGTGTCTTCCT+TGG | 0.531653 | tig0042325:-9011 | Msa1462500:CDS |
| AACGTGGCTTCTTCTTTCAA+CGG | 0.542163 | tig0042325:-11136 | Msa1462500:CDS |
| TGATGTAGGAAGCAGCTGGC+AGG | 0.543439 | tig0042325:+8975 | Msa1462500:intergenic |
| TTAAACGAGTGGAAAGAGAA+AGG | 0.546612 | tig0042325:-11223 | Msa1462500:CDS |
| AGCGTCTATGCAGCAAGTAA+AGG | 0.551642 | tig0042325:-10711 | Msa1462500:intron |
| AACAATCTGTCCAGTGATGT+AGG | 0.551671 | tig0042325:+8961 | Msa1462500:intergenic |
| GATGTACCAATTGACATAGA+TGG | 0.556385 | tig0042325:+10811 | Msa1462500:intergenic |
| TTCAAACTAAACGACGTCGT+TGG | 0.567104 | tig0042325:-11481 | Msa1462500:five_prime_UTR |
| TTTCCAGATTCTTTAAGCAG+AGG | 0.567292 | tig0042325:+10789 | Msa1462500:intergenic |
| TATTAGGTAATCCTCATGCT+GGG | 0.570838 | tig0042325:+8902 | Msa1462500:intergenic |
| CAGATTGTTTCTGTTGATGG+AGG | 0.575569 | tig0042325:-8947 | Msa1462500:CDS |
| GAGAGCGTTGAATCCTTTGA+GGG | 0.575644 | tig0042325:+11354 | Msa1462500:intergenic |
| AGCTCAAGATGGTCCCTCAA+AGG | 0.580641 | tig0042325:-11367 | Msa1462500:CDS |
| AGGAAGCAGCTGGCAGGCAA+AGG | 0.580855 | tig0042325:+8981 | Msa1462500:intergenic |
| TTCTTCGTGTTCACTCGAAG+AGG | 0.582618 | tig0042325:-11430 | Msa1462500:five_prime_UTR |
| CCAGTGATGTAGGAAGCAGC+TGG | 0.595402 | tig0042325:+8971 | Msa1462500:intergenic |
| ATCATCTTCTTCTCAAAGAG+AGG | 0.596910 | tig0042325:-11170 | Msa1462500:CDS |
| ATGAGGATTACCTAATACAC+CGG | 0.598461 | tig0042325:-8896 | Msa1462500:exon |
| AGCATTACATGTTCCACAAG+TGG | 0.604747 | tig0042325:+10508 | Msa1462500:intergenic |
| TGCAAACTGGTGATTCATGT+GGG | 0.606536 | tig0042325:-8600 | Msa1462500:three_prime_UTR |
| GTTGCATCTCTCACAAGCAT+AGG | 0.610660 | tig0042325:-10741 | Msa1462500:CDS |
| GCAGTAGCAGAAGCTCAAGA+TGG | 0.612756 | tig0042325:-11378 | Msa1462500:CDS |
| ATGGATTTCAACCCAGCATG+AGG | 0.617391 | tig0042325:-8913 | Msa1462500:CDS |
| TGAATAAACGCTTAAACGAG+TGG | 0.622975 | tig0042325:-11234 | Msa1462500:CDS |
| GATTTCTTGGAACAGAACAA+AGG | 0.623559 | tig0042325:-8645 | Msa1462500:three_prime_UTR |
| GGAGCAACTGCGTTGCACCC+TGG | 0.632107 | tig0042325:-10543 | Msa1462500:CDS |
| CATTATTGTGTTGAGTAGGG+AGG | 0.636098 | tig0042325:+8820 | Msa1462500:intergenic |
| TTGCAAACTGGTGATTCATG+TGG | 0.642775 | tig0042325:-8601 | Msa1462500:three_prime_UTR |
| TTCAACGCTCTCGTCACCGG+CGG | 0.643369 | tig0042325:-11343 | Msa1462500:CDS |
| GTATACGAAAACACCACTTG+TGG | 0.645433 | tig0042325:-10521 | Msa1462500:CDS |
| GTGTTGAGTAGGGAGGTGCA+TGG | 0.682214 | tig0042325:+8827 | Msa1462500:intergenic |
| CAAACTGGTGATTCATGTGG+GGG | 0.683007 | tig0042325:-8598 | Msa1462500:three_prime_UTR |
| AGAGGAGCTTATTCGAAACG+TGG | 0.683344 | tig0042325:-11152 | Msa1462500:CDS |
| GCAAACTGGTGATTCATGTG+GGG | 0.692600 | tig0042325:-8599 | Msa1462500:three_prime_UTR |
| CACTTGTTCTAGGAACCAAG+AGG | 0.692789 | tig0042325:-11260 | Msa1462500:CDS |
| AAGAGGCACAGAAACAACAA+TGG | 0.695476 | tig0042325:-11413 | Msa1462500:exon |
| ACCAAGGAAGACACTTCATG+TGG | 0.707139 | tig0042325:+9010 | Msa1462500:intergenic |
| CAGGCAAAGGAAAGTCACCA+AGG | 0.712267 | tig0042325:+8994 | Msa1462500:intergenic |
| CCTAGAACAAGTGTAAACTG+TGG | 0.737540 | tig0042325:+11270 | Msa1462500:intergenic |
| ACAATGCTGGAACAAATGTG+AGG | 0.761871 | tig0042325:-10902 | Msa1462500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAGAAAATATATAGAAA+AGG | + | tig0042325:8994-9013 | Msa1462500:intergenic | 15.0% |
| !!! | TATTCTTCTATTTTGTTATT+AGG | - | tig0042325:9722-9741 | Msa1462500:intron | 15.0% |
| !! | ATGTAGTATTAATCTATAAA+TGG | - | tig0042325:10931-10950 | Msa1462500:intron | 15.0% |
| !!! | AACCTTTTGCTTAAATATAA+TGG | - | tig0042325:9418-9437 | Msa1462500:intron | 20.0% |
| !! | ATCCATTATATTTAAGCAAA+AGG | + | tig0042325:9423-9442 | Msa1462500:intergenic | 20.0% |
| !!! | TTTTGCTTAAATATAATGGA+TGG | - | tig0042325:9422-9441 | Msa1462500:intron | 20.0% |
| !! | TTTGTAATCATGATTTGATT+TGG | - | tig0042325:9655-9674 | Msa1462500:intron | 20.0% |
| !! | AATTCTTTAGATTATTGAAC+AGG | - | tig0042325:9865-9884 | Msa1462500:intron | 20.0% |
| !! | TAGAACCAAAAAGAATAAAT+TGG | - | tig0042325:10133-10152 | Msa1462500:intron | 20.0% |
| !!! | AGTAACCAATTTATTCTTTT+TGG | + | tig0042325:10141-10160 | Msa1462500:intergenic | 20.0% |
| !! | CAAAATAAAAAAATCACATC+CGG | + | tig0042325:11204-11223 | Msa1462500:intergenic | 20.0% |
| !!! | ATTTTGTTTTCTGAATAGTA+TGG | - | tig0042325:11334-11353 | Msa1462500:CDS | 20.0% |
| !! | TTAAAATGTTCCATTCTTAT+TGG | - | tig0042325:11389-11408 | Msa1462500:CDS | 20.0% |
| !!! | CAAAATTTTGTTTGATTTCT+TGG | - | tig0042325:11420-11439 | Msa1462500:five_prime_UTR | 20.0% |
| ! | ATTGAAGATATATCCAATGT+CGG | + | tig0042325:9087-9106 | Msa1462500:intergenic | 25.0% |
| ! | TATGATGTTCTTGTGAAATT+AGG | - | tig0042325:9150-9169 | Msa1462500:intron | 25.0% |
| ! | AAAAAATCTTGCTTGTGAAT+GGG | - | tig0042325:9497-9516 | Msa1462500:intron | 25.0% |
| ! | TAAAAAAAATGACAAAGCCA+TGG | + | tig0042325:9620-9639 | Msa1462500:intergenic | 25.0% |
| !!! | ACATTCATACTCATTTTTGT+AGG | - | tig0042325:9784-9803 | Msa1462500:intron | 25.0% |
| ! | ATCAAAATTGCTTGCATATT+TGG | - | tig0042325:9891-9910 | Msa1462500:intron | 25.0% |
| ! | TCAAAATTGCTTGCATATTT+GGG | - | tig0042325:9892-9911 | Msa1462500:intron | 25.0% |
| ! | TACTCTTATCACAAGTTTAA+TGG | - | tig0042325:9960-9979 | Msa1462500:intron | 25.0% |
| ! | CAATGTAATTACTTCCATAA+AGG | - | tig0042325:10031-10050 | Msa1462500:intron | 25.0% |
| ! | TGATTATCAAATGACCTTTA+TGG | + | tig0042325:10048-10067 | Msa1462500:intergenic | 25.0% |
| ! | ATTCATTTAGTATTGCATAC+AGG | - | tig0042325:10367-10386 | Msa1462500:intron | 25.0% |
| ! | TTCATTTAGTATTGCATACA+GGG | - | tig0042325:10368-10387 | Msa1462500:intron | 25.0% |
| ! | ATGTATATGATACACAATTG+TGG | - | tig0042325:10469-10488 | Msa1462500:intron | 25.0% |
| !! | GACATACTAAAACATGATTT+TGG | + | tig0042325:10529-10548 | Msa1462500:intergenic | 25.0% |
| ! | CATACGAATAAGAAATGAAT+TGG | - | tig0042325:10675-10694 | Msa1462500:intron | 25.0% |
| !! | TTGTCAAGTTCTGATTAAAT+AGG | - | tig0042325:11285-11304 | Msa1462500:CDS | 25.0% |
| !! | TTTTCTGAATAGTATGGAAA+TGG | - | tig0042325:11340-11359 | Msa1462500:CDS | 25.0% |
| ! | GAGAAAGGTTTTTCTGTTTA+TGG | - | tig0042325:8870-8889 | Msa1462500:three_prime_UTR | 30.0% |
| ! | ATATCTTCAATCAGAAGTGT+CGG | - | tig0042325:9096-9115 | Msa1462500:intron | 30.0% |
| CAAAAAATCTTGCTTGTGAA+TGG | - | tig0042325:9496-9515 | Msa1462500:intron | 30.0% | |
| ACCTTCAATTATTCATTCCA+TGG | - | tig0042325:9600-9619 | Msa1462500:intron | 30.0% | |
| TTAAACAATGACCAATCAGT+CGG | + | tig0042325:9688-9707 | Msa1462500:intergenic | 30.0% | |
| ! | TGATTGGTCATTGTTTAATC+AGG | - | tig0042325:9690-9709 | Msa1462500:intron | 30.0% |
| ! | GATTGGTCATTGTTTAATCA+GGG | - | tig0042325:9691-9710 | Msa1462500:intron | 30.0% |
| ATTGGTCATTGTTTAATCAG+GGG | - | tig0042325:9692-9711 | Msa1462500:intron | 30.0% | |
| ATTGTTTAATCAGGGGAATA+TGG | - | tig0042325:9699-9718 | Msa1462500:intron | 30.0% | |
| ! | TTAATGGTTTTCCATGTTGA+CGG | - | tig0042325:9976-9995 | Msa1462500:intron | 30.0% |
| AATTCACAATATTTGCACCT+AGG | - | tig0042325:10092-10111 | Msa1462500:intron | 30.0% | |
| ATTCACAATATTTGCACCTA+GGG | - | tig0042325:10093-10112 | Msa1462500:intron | 30.0% | |
| !!! | TTTTGGTTCTAACTGACAAA+TGG | + | tig0042325:10124-10143 | Msa1462500:intergenic | 30.0% |
| ! | TGTCCAATCTTTTATAGTTG+AGG | - | tig0042325:10545-10564 | Msa1462500:CDS | 30.0% |
| AGTCCTCAACTATAAAAGAT+TGG | + | tig0042325:10551-10570 | Msa1462500:intergenic | 30.0% | |
| ATAGTTGAGGACTGTATATT+TGG | - | tig0042325:10558-10577 | Msa1462500:CDS | 30.0% | |
| !! | TAAGAAATGAATTGGCTTTG+AGG | - | tig0042325:10683-10702 | Msa1462500:intron | 30.0% |
| !! | AAGAAATGAATTGGCTTTGA+GGG | - | tig0042325:10684-10703 | Msa1462500:intron | 30.0% |
| !!! | ACTTTTTTGTTAAGACGCAT+GGG | - | tig0042325:10727-10746 | Msa1462500:CDS | 30.0% |
| ATTAATACTACATGAGCACA+CGG | + | tig0042325:10924-10943 | Msa1462500:intergenic | 30.0% | |
| TACCATTATTGTGTTGAGTA+GGG | + | tig0042325:11264-11283 | Msa1462500:intergenic | 30.0% | |
| ATACCATTATTGTGTTGAGT+AGG | + | tig0042325:11265-11284 | Msa1462500:intergenic | 30.0% | |
| ! | AGTTCTGATTAAATAGGATC+TGG | - | tig0042325:11291-11310 | Msa1462500:CDS | 30.0% |
| TGATCTTGATCCAATAAGAA+TGG | + | tig0042325:11402-11421 | Msa1462500:intergenic | 30.0% | |
| GAACAAAGGAATTCAATGTT+TGG | - | tig0042325:11447-11466 | Msa1462500:five_prime_UTR | 30.0% | |
| TTTGGCAAAAAATTGCAAAC+TGG | - | tig0042325:11465-11484 | Msa1462500:five_prime_UTR | 30.0% | |
| TGAATAAACGCTTAAACGAG+TGG | - | tig0042325:8844-8863 | Msa1462500:three_prime_UTR | 35.0% | |
| TTAAACGAGTGGAAAGAGAA+AGG | - | tig0042325:8855-8874 | Msa1462500:three_prime_UTR | 35.0% | |
| ATCATCTTCTTCTCAAAGAG+AGG | - | tig0042325:8908-8927 | Msa1462500:CDS | 35.0% | |
| TGAAATTAGGTGAACAATGC+TGG | - | tig0042325:9163-9182 | Msa1462500:intron | 35.0% | |
| GAAGCCAACAATTGAGTATA+CGG | - | tig0042325:9198-9217 | Msa1462500:intron | 35.0% | |
| GAAAGTGATGACTACTAACT+TGG | - | tig0042325:9234-9253 | Msa1462500:intron | 35.0% | |
| TGCATACCATCTATGTCAAT+TGG | - | tig0042325:9261-9280 | Msa1462500:intron | 35.0% | |
| GATGTACCAATTGACATAGA+TGG | + | tig0042325:9270-9289 | Msa1462500:intergenic | 35.0% | |
| TTTCCAGATTCTTTAAGCAG+AGG | + | tig0042325:9292-9311 | Msa1462500:intergenic | 35.0% | |
| CTGCTTAAAGAATCTGGAAA+TGG | - | tig0042325:9292-9311 | Msa1462500:intron | 35.0% | |
| AATGGGCGAAAGACAATATA+AGG | - | tig0042325:9514-9533 | Msa1462500:intron | 35.0% | |
| GCCATGGAATGAATAATTGA+AGG | + | tig0042325:9604-9623 | Msa1462500:intergenic | 35.0% | |
| AATTGCTTGCATATTTGGGA+TGG | - | tig0042325:9896-9915 | Msa1462500:intron | 35.0% | |
| ! | GATACATTTTTCCGTCAACA+TGG | + | tig0042325:9990-10009 | Msa1462500:intergenic | 35.0% |
| ATCCCTTCACAAATTGTCTA+TGG | - | tig0042325:10267-10286 | Msa1462500:intron | 35.0% | |
| TAATCGTCAGTGTTGTCAAA+TGG | + | tig0042325:10333-10352 | Msa1462500:intergenic | 35.0% | |
| ACATACGTGAATCAAACAGA+AGG | + | tig0042325:10453-10472 | Msa1462500:intergenic | 35.0% | |
| !! | ATGATTTTGGCATCTTCACA+TGG | + | tig0042325:10516-10535 | Msa1462500:intergenic | 35.0% |
| GAGGACTGTATATTTGGATA+TGG | - | tig0042325:10564-10583 | Msa1462500:CDS | 35.0% | |
| !!! | GACTTTTTTGTTAAGACGCA+TGG | - | tig0042325:10726-10745 | Msa1462500:CDS | 35.0% |
| ! | TGGCTCTTTAACATTTTTCC+TGG | - | tig0042325:10752-10771 | Msa1462500:CDS | 35.0% |
| TTGGTTTATCTGTGTATGGA+GGG | - | tig0042325:10833-10852 | Msa1462500:CDS | 35.0% | |
| TATTAGGTAATCCTCATGCT+GGG | + | tig0042325:11179-11198 | Msa1462500:intergenic | 35.0% | |
| ATGAGGATTACCTAATACAC+CGG | - | tig0042325:11182-11201 | Msa1462500:CDS | 35.0% | |
| AAAATCACATCCGGTGTATT+AGG | + | tig0042325:11195-11214 | Msa1462500:intergenic | 35.0% | |
| GATTTCTTGGAACAGAACAA+AGG | - | tig0042325:11433-11452 | Msa1462500:five_prime_UTR | 35.0% | |
| TTCAAACTAAACGACGTCGT+TGG | - | tig0042325:8597-8616 | Msa1462500:three_prime_UTR | 40.0% | |
| ! | AAGAGGCACAGAAACAACAA+TGG | - | tig0042325:8665-8684 | Msa1462500:three_prime_UTR | 40.0% |
| CCTAGAACAAGTGTAAACTG+TGG | + | tig0042325:8811-8830 | Msa1462500:intergenic | 40.0% | |
| CCACAGTTTACACTTGTTCT+AGG | - | tig0042325:8808-8827 | Msa1462500:three_prime_UTR | 40.0% | |
| AACGTGGCTTCTTCTTTCAA+CGG | - | tig0042325:8942-8961 | Msa1462500:CDS | 40.0% | |
| ACAATGCTGGAACAAATGTG+AGG | - | tig0042325:9176-9195 | Msa1462500:intron | 40.0% | |
| TCAGCCGTATACTCAATTGT+TGG | + | tig0042325:9205-9224 | Msa1462500:intergenic | 40.0% | |
| CATCCTCTGCTTAAAGAATC+TGG | - | tig0042325:9286-9305 | Msa1462500:intron | 40.0% | |
| ! | AGTGGTGTTTTCGTATACCA+GGG | + | tig0042325:9555-9574 | Msa1462500:intergenic | 40.0% |
| ! | AAGTGGTGTTTTCGTATACC+AGG | + | tig0042325:9556-9575 | Msa1462500:intergenic | 40.0% |
| GTATACGAAAACACCACTTG+TGG | - | tig0042325:9557-9576 | Msa1462500:intron | 40.0% | |
| AGCATTACATGTTCCACAAG+TGG | + | tig0042325:9573-9592 | Msa1462500:intergenic | 40.0% | |
| GTACTTGTCTGTAGTCTTTG+AGG | - | tig0042325:9836-9855 | Msa1462500:intron | 40.0% | |
| CGCCATAGACAATTTGTGAA+GGG | + | tig0042325:10272-10291 | Msa1462500:intergenic | 40.0% | |
| CCTTCACAAATTGTCTATGG+CGG | - | tig0042325:10270-10289 | Msa1462500:intron | 40.0% | |
| AACAGAAGGCAGTGGAATTA+TGG | + | tig0042325:10439-10458 | Msa1462500:intergenic | 40.0% | |
| CACATGGATCAAGGTAACAT+TGG | + | tig0042325:10500-10519 | Msa1462500:intergenic | 40.0% | |
| ACAGTTGTAGCAAGTGATTC+TGG | - | tig0042325:10619-10638 | Msa1462500:intron | 40.0% | |
| CAGTTGTAGCAAGTGATTCT+GGG | - | tig0042325:10620-10639 | Msa1462500:intron | 40.0% | |
| GGGCATCAATATGGCAAATA+TGG | - | tig0042325:10704-10723 | Msa1462500:intron | 40.0% | |
| TTTGTTAAGACGCATGGGTT+TGG | - | tig0042325:10732-10751 | Msa1462500:CDS | 40.0% | |
| !! | GTGGTTGGTTTATCTGTGTA+TGG | - | tig0042325:10829-10848 | Msa1462500:CDS | 40.0% |
| ! | GTTGGTTTATCTGTGTATGG+AGG | - | tig0042325:10832-10851 | Msa1462500:CDS | 40.0% |
| ! | TGGAGGGTTTTCTGCTATAT+AGG | - | tig0042325:10849-10868 | Msa1462500:CDS | 40.0% |
| GGTTCTGCTATACGCTTTAT+CGG | + | tig0042325:11050-11069 | Msa1462500:intergenic | 40.0% | |
| AACAATCTGTCCAGTGATGT+AGG | + | tig0042325:11120-11139 | Msa1462500:intergenic | 40.0% | |
| !! | GGACAGATTGTTTCTGTTGA+TGG | - | tig0042325:11128-11147 | Msa1462500:CDS | 40.0% |
| !! | CAGATTGTTTCTGTTGATGG+AGG | - | tig0042325:11131-11150 | Msa1462500:CDS | 40.0% |
| GATGGAGGATTTACTGTGAA+TGG | - | tig0042325:11146-11165 | Msa1462500:CDS | 40.0% | |
| GTATTAGGTAATCCTCATGC+TGG | + | tig0042325:11180-11199 | Msa1462500:intergenic | 40.0% | |
| CATTATTGTGTTGAGTAGGG+AGG | + | tig0042325:11261-11280 | Msa1462500:intergenic | 40.0% | |
| CTCCCTACTCAACACAATAA+TGG | - | tig0042325:11259-11278 | Msa1462500:CDS | 40.0% | |
| !! | ATAGGATCTGGCTTTCAGTT+TGG | - | tig0042325:11303-11322 | Msa1462500:CDS | 40.0% |
| TTGCAAACTGGTGATTCATG+TGG | - | tig0042325:11477-11496 | Msa1462500:five_prime_UTR | 40.0% | |
| TGCAAACTGGTGATTCATGT+GGG | - | tig0042325:11478-11497 | Msa1462500:five_prime_UTR | 40.0% | |
| !! | TAAACGACGTCGTTGGTTCT+TGG | - | tig0042325:8604-8623 | Msa1462500:three_prime_UTR | 45.0% |
| TTCTTCGTGTTCACTCGAAG+AGG | - | tig0042325:8648-8667 | Msa1462500:three_prime_UTR | 45.0% | |
| !! | GAGAGCGTTGAATCCTTTGA+GGG | + | tig0042325:8727-8746 | Msa1462500:intergenic | 45.0% |
| GTTGAAGAACTCGCTGAGTT+TGG | - | tig0042325:8783-8802 | Msa1462500:three_prime_UTR | 45.0% | |
| !! | CACTTGTTCTAGGAACCAAG+AGG | - | tig0042325:8818-8837 | Msa1462500:three_prime_UTR | 45.0% |
| AGCGTTTATTCAGCTCCTCT+TGG | + | tig0042325:8836-8855 | Msa1462500:intergenic | 45.0% | |
| AGAGGAGCTTATTCGAAACG+TGG | - | tig0042325:8926-8945 | Msa1462500:CDS | 45.0% | |
| GTTGCATCTCTCACAAGCAT+AGG | - | tig0042325:9337-9356 | Msa1462500:intron | 45.0% | |
| TCTCTCACAAGCATAGGTTC+TGG | - | tig0042325:9343-9362 | Msa1462500:intron | 45.0% | |
| AGCGTCTATGCAGCAAGTAA+AGG | - | tig0042325:9367-9386 | Msa1462500:intron | 45.0% | |
| ! | TTGGATGAACACCGACTGAT+TGG | - | tig0042325:9674-9693 | Msa1462500:intron | 45.0% |
| GTGATTACCAGTGTTGTCGA+TGG | - | tig0042325:10173-10192 | Msa1462500:intron | 45.0% | |
| TATTGCACCATCGACAACAC+TGG | + | tig0042325:10183-10202 | Msa1462500:intergenic | 45.0% | |
| CGATGGTGCAATATGACAGA+AGG | - | tig0042325:10190-10209 | Msa1462500:intron | 45.0% | |
| ! | GCTGCAATGGCGTATTTCTA+TGG | + | tig0042325:10226-10245 | Msa1462500:intergenic | 45.0% |
| CCGCCATAGACAATTTGTGA+AGG | + | tig0042325:10273-10292 | Msa1462500:intergenic | 45.0% | |
| GTGAATCAAACAGAAGGCAG+TGG | + | tig0042325:10447-10466 | Msa1462500:intergenic | 45.0% | |
| TGGCATCTTCACATGGATCA+AGG | + | tig0042325:10509-10528 | Msa1462500:intergenic | 45.0% | |
| TTGTAGCAAGTGATTCTGGG+TGG | - | tig0042325:10623-10642 | Msa1462500:intron | 45.0% | |
| !! | TGGCTTTGAGGGCATCAATA+TGG | - | tig0042325:10695-10714 | Msa1462500:intron | 45.0% |
| ! | ACCACATGAAGTGTCTTCCT+TGG | - | tig0042325:11067-11086 | Msa1462500:intron | 45.0% |
| ACCAAGGAAGACACTTCATG+TGG | + | tig0042325:11071-11090 | Msa1462500:intergenic | 45.0% | |
| ATGGATTTCAACCCAGCATG+AGG | - | tig0042325:11165-11184 | Msa1462500:CDS | 45.0% | |
| GCAAACTGGTGATTCATGTG+GGG | - | tig0042325:11479-11498 | Msa1462500:five_prime_UTR | 45.0% | |
| CAAACTGGTGATTCATGTGG+GGG | - | tig0042325:11480-11499 | Msa1462500:five_prime_UTR | 45.0% | |
| GCAGTAGCAGAAGCTCAAGA+TGG | - | tig0042325:8700-8719 | Msa1462500:three_prime_UTR | 50.0% | |
| AGCTCAAGATGGTCCCTCAA+AGG | - | tig0042325:8711-8730 | Msa1462500:three_prime_UTR | 50.0% | |
| !! | CGAGAGCGTTGAATCCTTTG+AGG | + | tig0042325:8728-8747 | Msa1462500:intergenic | 50.0% |
| CATGTGTCTGTGTCCGACAT+TGG | - | tig0042325:9071-9090 | Msa1462500:CDS | 50.0% | |
| GTGTTGTCAAATGGCTGCCA+TGG | + | tig0042325:10324-10343 | Msa1462500:intergenic | 50.0% | |
| ACTAGAGCATGTGCAGATCC+AGG | + | tig0042325:10773-10792 | Msa1462500:intergenic | 50.0% | |
| TGTGCCTGCTGTGTTTGTGT+AGG | - | tig0042325:10807-10826 | Msa1462500:CDS | 50.0% | |
| ACCACCTACACAAACACAGC+AGG | + | tig0042325:10814-10833 | Msa1462500:intergenic | 50.0% | |
| GCTGTGTTTGTGTAGGTGGT+TGG | - | tig0042325:10814-10833 | Msa1462500:CDS | 50.0% | |
| CAGGCAAAGGAAAGTCACCA+AGG | + | tig0042325:11087-11106 | Msa1462500:intergenic | 50.0% | |
| GGATTCAACGCTCTCGTCAC+CGG | - | tig0042325:8732-8751 | Msa1462500:three_prime_UTR | 55.0% | |
| CTGACAAATGGCGCTTCCCT+AGG | + | tig0042325:10112-10131 | Msa1462500:intergenic | 55.0% | |
| TGGCATGGCATAGGCTGCAA+TGG | + | tig0042325:10239-10258 | Msa1462500:intergenic | 55.0% | |
| TTGCAGCCTATGCCATGCCA+TGG | - | tig0042325:10239-10258 | Msa1462500:intron | 55.0% | |
| TTGTGAAGGGATGCCTGCCA+TGG | + | tig0042325:10259-10278 | Msa1462500:intergenic | 55.0% | |
| ACCGACACGTCATTCTGCCA+TGG | - | tig0042325:10304-10323 | Msa1462500:intron | 55.0% | |
| GCCATGGCAGAATGACGTGT+CGG | + | tig0042325:10308-10327 | Msa1462500:intergenic | 55.0% | |
| GCCTGCTGTGTTTGTGTAGG+TGG | - | tig0042325:10810-10829 | Msa1462500:CDS | 55.0% | |
| TGATGTAGGAAGCAGCTGGC+AGG | + | tig0042325:11106-11125 | Msa1462500:intergenic | 55.0% | |
| CCAGTGATGTAGGAAGCAGC+TGG | + | tig0042325:11110-11129 | Msa1462500:intergenic | 55.0% | |
| CCAGCTGCTTCCTACATCAC+TGG | - | tig0042325:11107-11126 | Msa1462500:intron | 55.0% | |
| ! | GTGTTGAGTAGGGAGGTGCA+TGG | + | tig0042325:11254-11273 | Msa1462500:intergenic | 55.0% |
| TTCAACGCTCTCGTCACCGG+CGG | - | tig0042325:8735-8754 | Msa1462500:three_prime_UTR | 60.0% | |
| AGCCTATGCCATGCCATGGC+AGG | - | tig0042325:10243-10262 | Msa1462500:intron | 60.0% | |
| TGCCTGCCATGGCATGGCAT+AGG | + | tig0042325:10248-10267 | Msa1462500:intergenic | 60.0% | |
| AAGGGATGCCTGCCATGGCA+TGG | + | tig0042325:10254-10273 | Msa1462500:intergenic | 60.0% | |
| AGGAAGCAGCTGGCAGGCAA+AGG | + | tig0042325:11100-11119 | Msa1462500:intergenic | 60.0% | |
| ACCGGCGGAACGCGTGGAAT+CGG | - | tig0042325:8750-8769 | Msa1462500:three_prime_UTR | 65.0% | |
| TCCGATTCCACGCGTTCCGC+CGG | + | tig0042325:8754-8773 | Msa1462500:intergenic | 65.0% | |
| GGAGCAACTGCGTTGCACCC+TGG | - | tig0042325:9535-9554 | Msa1462500:intron | 65.0% | |
| CTCGTCACCGGCGGAACGCG+TGG | - | tig0042325:8744-8763 | Msa1462500:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0042325 | gene | 8592 | 11508 | 8592 | ID=Msa1462500;Name=Msa1462500 |
| tig0042325 | mRNA | 8592 | 11508 | 8592 | ID=Msa1462500-mRNA-1;Parent=Msa1462500;Name=Msa1462500-mRNA-1;_AED=0.35;_eAED=0.35;_QI=92|1|1|1|1|1|4|312|271 |
| tig0042325 | exon | 8592 | 9098 | 8592 | ID=Msa1462500-mRNA-1:exon:23678;Parent=Msa1462500-mRNA-1 |
| tig0042325 | exon | 10516 | 10622 | 10516 | ID=Msa1462500-mRNA-1:exon:23677;Parent=Msa1462500-mRNA-1 |
| tig0042325 | exon | 10712 | 10928 | 10712 | ID=Msa1462500-mRNA-1:exon:23676;Parent=Msa1462500-mRNA-1 |
| tig0042325 | exon | 11120 | 11508 | 11120 | ID=Msa1462500-mRNA-1:exon:23675;Parent=Msa1462500-mRNA-1 |
| tig0042325 | five_prime_UTR | 11417 | 11508 | 11417 | ID=Msa1462500-mRNA-1:five_prime_utr;Parent=Msa1462500-mRNA-1 |
| tig0042325 | CDS | 11120 | 11416 | 11120 | ID=Msa1462500-mRNA-1:cds;Parent=Msa1462500-mRNA-1 |
| tig0042325 | CDS | 10712 | 10928 | 10712 | ID=Msa1462500-mRNA-1:cds;Parent=Msa1462500-mRNA-1 |
| tig0042325 | CDS | 10516 | 10622 | 10516 | ID=Msa1462500-mRNA-1:cds;Parent=Msa1462500-mRNA-1 |
| tig0042325 | CDS | 8904 | 9098 | 8904 | ID=Msa1462500-mRNA-1:cds;Parent=Msa1462500-mRNA-1 |
| tig0042325 | three_prime_UTR | 8592 | 8903 | 8592 | ID=Msa1462500-mRNA-1:three_prime_utr;Parent=Msa1462500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
