Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462510 | XP_013470516.1 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 7.84e-146 | 416 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462510 | sp|Q9ASS6|PNSL5_ARATH | 78.977 | 176 | 37 | 0 | 51 | 226 | 82 | 257 | 4.45e-106 | 309 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462510 | I3S7Z5 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 3.74e-146 | 416 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003470 | Msa1462510 | 0.822238 | 2.635731e-53 | -8.615850e-47 |
| Msa0017120 | Msa1462510 | 0.814160 | 1.774374e-51 | -8.615850e-47 |
| Msa0017940 | Msa1462510 | 0.815943 | 7.133008e-52 | -8.615850e-47 |
| Msa0018220 | Msa1462510 | 0.819336 | 1.224970e-52 | -8.615850e-47 |
| Msa0024680 | Msa1462510 | 0.833392 | 5.476551e-56 | -8.615850e-47 |
| Msa0027540 | Msa1462510 | 0.806391 | 8.415514e-50 | -8.615850e-47 |
| Msa0030310 | Msa1462510 | 0.807601 | 4.667582e-50 | -8.615850e-47 |
| Msa0044220 | Msa1462510 | 0.809999 | 1.433016e-50 | -8.615850e-47 |
| Msa0048020 | Msa1462510 | 0.830586 | 2.701325e-55 | -8.615850e-47 |
| Msa0050580 | Msa1462510 | 0.803766 | 2.980918e-49 | -8.615850e-47 |
| Msa0052460 | Msa1462510 | 0.825909 | 3.625351e-54 | -8.615850e-47 |
| Msa0073820 | Msa1462510 | 0.809084 | 2.253693e-50 | -8.615850e-47 |
| Msa0089210 | Msa1462510 | 0.816273 | 6.020238e-52 | -8.615850e-47 |
| Msa0094420 | Msa1462510 | 0.805673 | 1.191801e-49 | -8.615850e-47 |
| Msa0097050 | Msa1462510 | 0.816924 | 4.303839e-52 | -8.615850e-47 |
| Msa0103780 | Msa1462510 | 0.802264 | 6.091417e-49 | -8.615850e-47 |
| Msa0105210 | Msa1462510 | 0.803686 | 3.097160e-49 | -8.615850e-47 |
| Msa0120330 | Msa1462510 | 0.813506 | 2.473468e-51 | -8.615850e-47 |
| Msa1350670 | Msa1462510 | 0.846066 | 2.743384e-59 | -8.615850e-47 |
| Msa1352290 | Msa1462510 | 0.802010 | 6.870482e-49 | -8.615850e-47 |
| Msa1354040 | Msa1462510 | 0.828015 | 1.136900e-54 | -8.615850e-47 |
| Msa1355400 | Msa1462510 | 0.815286 | 9.993717e-52 | -8.615850e-47 |
| Msa1367940 | Msa1462510 | 0.804135 | 2.497986e-49 | -8.615850e-47 |
| Msa1376640 | Msa1462510 | 0.803164 | 3.972755e-49 | -8.615850e-47 |
| Msa1379980 | Msa1462510 | 0.836517 | 8.934816e-57 | -8.615850e-47 |
| Msa1381130 | Msa1462510 | 0.802740 | 4.861156e-49 | -8.615850e-47 |
| Msa1382310 | Msa1462510 | 0.802025 | 6.822506e-49 | -8.615850e-47 |
| Msa1382720 | Msa1462510 | 0.832149 | 1.114817e-55 | -8.615850e-47 |
| Msa1385900 | Msa1462510 | 0.818365 | 2.036739e-52 | -8.615850e-47 |
| Msa1389470 | Msa1462510 | 0.977355 | 1.293639e-143 | -8.615850e-47 |
| Msa1390310 | Msa1462510 | 0.821589 | 3.726803e-53 | -8.615850e-47 |
| Msa1391370 | Msa1462510 | 0.981471 | 1.138171e-152 | -8.615850e-47 |
| Msa1405770 | Msa1462510 | 0.800869 | 1.177111e-48 | -8.615850e-47 |
| Msa1406550 | Msa1462510 | 0.809675 | 1.682950e-50 | -8.615850e-47 |
| Msa1407710 | Msa1462510 | 0.813948 | 1.976496e-51 | -8.615850e-47 |
| Msa1435040 | Msa1462510 | 0.805541 | 1.270013e-49 | -8.615850e-47 |
| Msa1435050 | Msa1462510 | 0.830757 | 2.453459e-55 | -8.615850e-47 |
| Msa1439670 | Msa1462510 | 0.823248 | 1.534204e-53 | -8.615850e-47 |
| Msa1439680 | Msa1462510 | 0.803354 | 3.628369e-49 | -8.615850e-47 |
| Msa1442300 | Msa1462510 | 0.825409 | 4.762783e-54 | -8.615850e-47 |
| Msa1447230 | Msa1462510 | 0.831481 | 1.629430e-55 | -8.615850e-47 |
| Msa1462500 | Msa1462510 | 0.822692 | 2.067838e-53 | -8.615850e-47 |
| Msa0607480 | Msa1462510 | 0.826037 | 3.379322e-54 | -8.615850e-47 |
| Msa0619330 | Msa1462510 | 0.821341 | 4.251355e-53 | -8.615850e-47 |
| Msa0629290 | Msa1462510 | 0.821309 | 4.323065e-53 | -8.615850e-47 |
| Msa0634270 | Msa1462510 | 0.810054 | 1.394772e-50 | -8.615850e-47 |
| Msa0640880 | Msa1462510 | 0.833078 | 6.555194e-56 | -8.615850e-47 |
| Msa0642650 | Msa1462510 | 0.847355 | 1.218570e-59 | -8.615850e-47 |
| Msa0647750 | Msa1462510 | 0.801800 | 7.590857e-49 | -8.615850e-47 |
| Msa0659040 | Msa1462510 | 0.804281 | 2.329618e-49 | -8.615850e-47 |
| Msa0678890 | Msa1462510 | 0.824523 | 7.707949e-54 | -8.615850e-47 |
| Msa0681890 | Msa1462510 | 0.838412 | 2.920101e-57 | -8.615850e-47 |
| Msa0682400 | Msa1462510 | 0.820895 | 5.387100e-53 | -8.615850e-47 |
| Msa0690170 | Msa1462510 | 0.826563 | 2.533032e-54 | -8.615850e-47 |
| Msa0703720 | Msa1462510 | 0.846566 | 2.004710e-59 | -8.615850e-47 |
| Msa0703760 | Msa1462510 | 0.840136 | 1.042458e-57 | -8.615850e-47 |
| Msa0704990 | Msa1462510 | 0.801864 | 7.363459e-49 | -8.615850e-47 |
| Msa0707780 | Msa1462510 | 0.809064 | 2.275757e-50 | -8.615850e-47 |
| Msa0709480 | Msa1462510 | 0.832638 | 8.434755e-56 | -8.615850e-47 |
| Msa0717090 | Msa1462510 | 0.802929 | 4.443199e-49 | -8.615850e-47 |
| Msa0722940 | Msa1462510 | 0.805811 | 1.114945e-49 | -8.615850e-47 |
| Msa0723150 | Msa1462510 | 0.807059 | 6.081177e-50 | -8.615850e-47 |
| Msa0730180 | Msa1462510 | 0.822007 | 2.982668e-53 | -8.615850e-47 |
| Msa0770430 | Msa1462510 | 0.813759 | 2.175527e-51 | -8.615850e-47 |
| Msa0790830 | Msa1462510 | 0.804719 | 1.887268e-49 | -8.615850e-47 |
| Msa0797220 | Msa1462510 | 0.809142 | 2.190157e-50 | -8.615850e-47 |
| Msa0803130 | Msa1462510 | 0.830548 | 2.759995e-55 | -8.615850e-47 |
| Msa0841490 | Msa1462510 | 0.828389 | 9.238266e-55 | -8.615850e-47 |
| Msa0135980 | Msa1462510 | 0.800034 | 1.741351e-48 | -8.615850e-47 |
| Msa0139900 | Msa1462510 | 0.814722 | 1.333148e-51 | -8.615850e-47 |
| Msa0141430 | Msa1462510 | 0.830798 | 2.397169e-55 | -8.615850e-47 |
| Msa0141830 | Msa1462510 | 0.820162 | 7.935352e-53 | -8.615850e-47 |
| Msa0143970 | Msa1462510 | 0.806112 | 9.635786e-50 | -8.615850e-47 |
| Msa0146470 | Msa1462510 | 0.816708 | 4.812228e-52 | -8.615850e-47 |
| Msa0157020 | Msa1462510 | 0.822837 | 1.913298e-53 | -8.615850e-47 |
| Msa0162030 | Msa1462510 | 0.809850 | 1.543045e-50 | -8.615850e-47 |
| Msa0162050 | Msa1462510 | 0.804769 | 1.842826e-49 | -8.615850e-47 |
| Msa0168100 | Msa1462510 | 0.800999 | 1.107196e-48 | -8.615850e-47 |
| Msa0171780 | Msa1462510 | 0.811055 | 8.476848e-51 | -8.615850e-47 |
| Msa0172350 | Msa1462510 | 0.810710 | 1.006594e-50 | -8.615850e-47 |
| Msa0172960 | Msa1462510 | -0.818337 | 2.065677e-52 | -8.615850e-47 |
| Msa0183620 | Msa1462510 | 0.801426 | 9.055855e-49 | -8.615850e-47 |
| Msa0200970 | Msa1462510 | 0.805059 | 1.602484e-49 | -8.615850e-47 |
| Msa0207000 | Msa1462510 | 0.810765 | 9.797895e-51 | -8.615850e-47 |
| Msa0227500 | Msa1462510 | 0.805450 | 1.327402e-49 | -8.615850e-47 |
| Msa1224670 | Msa1462510 | 0.838876 | 2.216604e-57 | -8.615850e-47 |
| Msa1234960 | Msa1462510 | 0.807696 | 4.455409e-50 | -8.615850e-47 |
| Msa1235890 | Msa1462510 | 0.806004 | 1.015035e-49 | -8.615850e-47 |
| Msa1237030 | Msa1462510 | 0.806457 | 8.148444e-50 | -8.615850e-47 |
| Msa1250670 | Msa1462510 | 0.819070 | 1.408707e-52 | -8.615850e-47 |
| Msa1263030 | Msa1462510 | 0.840203 | 1.001515e-57 | -8.615850e-47 |
| Msa1271510 | Msa1462510 | 0.825278 | 5.113377e-54 | -8.615850e-47 |
| Msa1271600 | Msa1462510 | 0.817425 | 3.319974e-52 | -8.615850e-47 |
| Msa1280120 | Msa1462510 | 0.801012 | 1.100647e-48 | -8.615850e-47 |
| Msa1293530 | Msa1462510 | 0.809658 | 1.697180e-50 | -8.615850e-47 |
| Msa1302150 | Msa1462510 | 0.804350 | 2.253369e-49 | -8.615850e-47 |
| Msa1307370 | Msa1462510 | 0.821007 | 5.075916e-53 | -8.615850e-47 |
| Msa1309100 | Msa1462510 | 0.810120 | 1.349704e-50 | -8.615850e-47 |
| Msa1309360 | Msa1462510 | 0.803015 | 4.263643e-49 | -8.615850e-47 |
| Msa1315980 | Msa1462510 | 0.803942 | 2.739468e-49 | -8.615850e-47 |
| Msa1325980 | Msa1462510 | 0.802679 | 5.002922e-49 | -8.615850e-47 |
| Msa1337090 | Msa1462510 | 0.806400 | 8.377563e-50 | -8.615850e-47 |
| Msa0370600 | Msa1462510 | 0.821278 | 4.396531e-53 | -8.615850e-47 |
| Msa0374070 | Msa1462510 | 0.805790 | 1.126164e-49 | -8.615850e-47 |
| Msa0378340 | Msa1462510 | 0.829136 | 6.092921e-55 | -8.615850e-47 |
| Msa0382290 | Msa1462510 | 0.808331 | 3.264805e-50 | -8.615850e-47 |
| Msa0382560 | Msa1462510 | 0.809067 | 2.272023e-50 | -8.615850e-47 |
| Msa0417630 | Msa1462510 | 0.835674 | 1.462567e-56 | -8.615850e-47 |
| Msa0418200 | Msa1462510 | 0.818043 | 2.408527e-52 | -8.615850e-47 |
| Msa0423250 | Msa1462510 | 0.807690 | 4.467787e-50 | -8.615850e-47 |
| Msa0427690 | Msa1462510 | 0.831844 | 1.326039e-55 | -8.615850e-47 |
| Msa0431430 | Msa1462510 | 0.802168 | 6.375664e-49 | -8.615850e-47 |
| Msa0436450 | Msa1462510 | 0.844918 | 5.614256e-59 | -8.615850e-47 |
| Msa0440480 | Msa1462510 | 0.877659 | 5.262723e-69 | -8.615850e-47 |
| Msa0461640 | Msa1462510 | 0.811604 | 6.443152e-51 | -8.615850e-47 |
| Msa0464530 | Msa1462510 | 0.802522 | 5.390869e-49 | -8.615850e-47 |
| Msa0465860 | Msa1462510 | 0.809812 | 1.572272e-50 | -8.615850e-47 |
| Msa0990520 | Msa1462510 | 0.832188 | 1.090087e-55 | -8.615850e-47 |
| Msa0996080 | Msa1462510 | 0.802838 | 4.639190e-49 | -8.615850e-47 |
| Msa1002040 | Msa1462510 | 0.824644 | 7.217994e-54 | -8.615850e-47 |
| Msa1014270 | Msa1462510 | 0.804274 | 2.337153e-49 | -8.615850e-47 |
| Msa1022310 | Msa1462510 | 0.823811 | 1.132779e-53 | -8.615850e-47 |
| Msa1027150 | Msa1462510 | 0.816934 | 4.281044e-52 | -8.615850e-47 |
| Msa1027790 | Msa1462510 | 0.813574 | 2.389173e-51 | -8.615850e-47 |
| Msa1032140 | Msa1462510 | 0.800951 | 1.132429e-48 | -8.615850e-47 |
| Msa1044340 | Msa1462510 | 0.816586 | 5.122519e-52 | -8.615850e-47 |
| Msa1046870 | Msa1462510 | 0.811249 | 7.692611e-51 | -8.615850e-47 |
| Msa1054720 | Msa1462510 | 0.807467 | 4.984065e-50 | -8.615850e-47 |
| Msa1055260 | Msa1462510 | 0.800665 | 1.295755e-48 | -8.615850e-47 |
| Msa1055280 | Msa1462510 | 0.808646 | 2.796562e-50 | -8.615850e-47 |
| Msa1061180 | Msa1462510 | 0.834921 | 2.265660e-56 | -8.615850e-47 |
| Msa1067430 | Msa1462510 | 0.801603 | 8.329784e-49 | -8.615850e-47 |
| Msa1072080 | Msa1462510 | 0.819638 | 1.045475e-52 | -8.615850e-47 |
| Msa1084490 | Msa1462510 | 0.803368 | 3.604288e-49 | -8.615850e-47 |
| Msa1103670 | Msa1462510 | 0.815046 | 1.130006e-51 | -8.615850e-47 |
| Msa1106560 | Msa1462510 | 0.831773 | 1.380520e-55 | -8.615850e-47 |
| Msa0239660 | Msa1462510 | 0.832333 | 1.003881e-55 | -8.615850e-47 |
| Msa0247310 | Msa1462510 | 0.827735 | 1.327927e-54 | -8.615850e-47 |
| Msa0257130 | Msa1462510 | 0.825639 | 4.201467e-54 | -8.615850e-47 |
| Msa0264350 | Msa1462510 | 0.800924 | 1.146956e-48 | -8.615850e-47 |
| Msa0267760 | Msa1462510 | 0.823156 | 1.611520e-53 | -8.615850e-47 |
| Msa0274780 | Msa1462510 | 0.803327 | 3.675187e-49 | -8.615850e-47 |
| Msa0277640 | Msa1462510 | 0.817866 | 2.640331e-52 | -8.615850e-47 |
| Msa0288380 | Msa1462510 | 0.812008 | 5.262069e-51 | -8.615850e-47 |
| Msa0298970 | Msa1462510 | 0.814106 | 1.823694e-51 | -8.615850e-47 |
| Msa0315480 | Msa1462510 | 0.817069 | 3.992359e-52 | -8.615850e-47 |
| Msa0317260 | Msa1462510 | 0.808629 | 2.819276e-50 | -8.615850e-47 |
| Msa0318000 | Msa1462510 | 0.811651 | 6.294025e-51 | -8.615850e-47 |
| Msa0339860 | Msa1462510 | 0.806311 | 8.747146e-50 | -8.615850e-47 |
| Msa0358230 | Msa1462510 | 0.807597 | 4.677303e-50 | -8.615850e-47 |
| Msa1112610 | Msa1462510 | 0.817746 | 2.809805e-52 | -8.615850e-47 |
| Msa1125780 | Msa1462510 | 0.825707 | 4.047915e-54 | -8.615850e-47 |
| Msa1125950 | Msa1462510 | 0.832589 | 8.671804e-56 | -8.615850e-47 |
| Msa1129560 | Msa1462510 | 0.840531 | 8.223299e-58 | -8.615850e-47 |
| Msa1129720 | Msa1462510 | 0.832270 | 1.040410e-55 | -8.615850e-47 |
| Msa1147270 | Msa1462510 | 0.824580 | 7.471920e-54 | -8.615850e-47 |
| Msa1149760 | Msa1462510 | 0.840108 | 1.060359e-57 | -8.615850e-47 |
| Msa1157160 | Msa1462510 | 0.818419 | 1.979315e-52 | -8.615850e-47 |
| Msa1159100 | Msa1462510 | 0.834704 | 2.569716e-56 | -8.615850e-47 |
| Msa1166180 | Msa1462510 | 0.818280 | 2.128371e-52 | -8.615850e-47 |
| Msa1166280 | Msa1462510 | 0.810796 | 9.645308e-51 | -8.615850e-47 |
| Msa1171340 | Msa1462510 | 0.827509 | 1.504661e-54 | -8.615850e-47 |
| Msa1175750 | Msa1462510 | 0.830585 | 2.704002e-55 | -8.615850e-47 |
| Msa1183390 | Msa1462510 | 0.816790 | 4.611028e-52 | -8.615850e-47 |
| Msa1190910 | Msa1462510 | 0.841708 | 4.033036e-58 | -8.615850e-47 |
| Msa1197110 | Msa1462510 | 0.842186 | 3.015480e-58 | -8.615850e-47 |
| Msa1200920 | Msa1462510 | 0.825670 | 4.130199e-54 | -8.615850e-47 |
| Msa1220450 | Msa1462510 | -0.807346 | 5.287425e-50 | -8.615850e-47 |
| Msa1220460 | Msa1462510 | -0.803648 | 3.152675e-49 | -8.615850e-47 |
| Msa1220480 | Msa1462510 | -0.802166 | 6.383281e-49 | -8.615850e-47 |
| Msa1221260 | Msa1462510 | 0.800764 | 1.236489e-48 | -8.615850e-47 |
| Msa1222360 | Msa1462510 | 0.813727 | 2.211320e-51 | -8.615850e-47 |
| Msa1222390 | Msa1462510 | 0.826804 | 2.218703e-54 | -8.615850e-47 |
| Msa1223840 | Msa1462510 | 0.837837 | 4.106204e-57 | -8.615850e-47 |
| Msa0510230 | Msa1462510 | 0.803404 | 3.542950e-49 | -8.615850e-47 |
| Msa0518520 | Msa1462510 | 0.832432 | 9.487762e-56 | -8.615850e-47 |
| Msa0519200 | Msa1462510 | 0.822258 | 2.607616e-53 | -8.615850e-47 |
| Msa0524120 | Msa1462510 | 0.800153 | 1.646802e-48 | -8.615850e-47 |
| Msa0526700 | Msa1462510 | 0.825307 | 5.035239e-54 | -8.615850e-47 |
| Msa0526710 | Msa1462510 | 0.807723 | 4.398094e-50 | -8.615850e-47 |
| Msa0527600 | Msa1462510 | 0.815094 | 1.102408e-51 | -8.615850e-47 |
| Msa0538570 | Msa1462510 | 0.836695 | 8.049615e-57 | -8.615850e-47 |
| Msa0546380 | Msa1462510 | 0.830382 | 3.031528e-55 | -8.615850e-47 |
| Msa0546740 | Msa1462510 | 0.831748 | 1.400037e-55 | -8.615850e-47 |
| Msa0547050 | Msa1462510 | 0.822787 | 1.964507e-53 | -8.615850e-47 |
| Msa0561510 | Msa1462510 | 0.813671 | 2.274294e-51 | -8.615850e-47 |
| Msa0563530 | Msa1462510 | 0.844631 | 6.709237e-59 | -8.615850e-47 |
| Msa0567290 | Msa1462510 | 0.801288 | 9.665054e-49 | -8.615850e-47 |
| Msa0575250 | Msa1462510 | 0.803791 | 2.944512e-49 | -8.615850e-47 |
| Msa0576420 | Msa1462510 | 0.831228 | 1.879992e-55 | -8.615850e-47 |
| Msa0577440 | Msa1462510 | 0.807839 | 4.154949e-50 | -8.615850e-47 |
| Msa0581340 | Msa1462510 | 0.802336 | 5.887486e-49 | -8.615850e-47 |
| Msa0581460 | Msa1462510 | 0.815067 | 1.117477e-51 | -8.615850e-47 |
| Msa0594390 | Msa1462510 | 0.847880 | 8.737756e-60 | -8.615850e-47 |
| Msa0600390 | Msa1462510 | 0.841862 | 3.673140e-58 | -8.615850e-47 |
| Msa0843690 | Msa1462510 | 0.809541 | 1.798494e-50 | -8.615850e-47 |
| Msa0890250 | Msa1462510 | 0.828063 | 1.107097e-54 | -8.615850e-47 |
| Msa0922540 | Msa1462510 | 0.824414 | 8.178470e-54 | -8.615850e-47 |
| Msa0925160 | Msa1462510 | 0.844547 | 7.068115e-59 | -8.615850e-47 |
| Msa0925730 | Msa1462510 | 0.806092 | 9.728743e-50 | -8.615850e-47 |
| Msa0930330 | Msa1462510 | 0.816183 | 6.304746e-52 | -8.615850e-47 |
| Msa0931480 | Msa1462510 | 0.830023 | 3.709472e-55 | -8.615850e-47 |
| Msa0931610 | Msa1462510 | 0.800319 | 1.523757e-48 | -8.615850e-47 |
| Msa0937550 | Msa1462510 | 0.804335 | 2.269131e-49 | -8.615850e-47 |
| Msa0937940 | Msa1462510 | 0.802527 | 5.377176e-49 | -8.615850e-47 |
| Msa0944510 | Msa1462510 | 0.817111 | 3.907249e-52 | -8.615850e-47 |
| Msa0951460 | Msa1462510 | 0.815580 | 8.597532e-52 | -8.615850e-47 |
| Msa0951960 | Msa1462510 | 0.810178 | 1.311425e-50 | -8.615850e-47 |
| Msa0955260 | Msa1462510 | 0.824028 | 1.007734e-53 | -8.615850e-47 |
| Msa0958020 | Msa1462510 | 0.825068 | 5.734552e-54 | -8.615850e-47 |
| Msa0972730 | Msa1462510 | 0.845977 | 2.899587e-59 | -8.615850e-47 |
| Msa0974750 | Msa1462510 | 0.802365 | 5.807209e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462510 | MtrunA17_Chr1g0213971 | 92.576 | 229 | 11 | 2 | 2 | 226 | 18 | 244 | 7.21e-150 | 416 |
| Msa1462510 | MtrunA17_Chr1g0193711 | 63.978 | 186 | 63 | 2 | 41 | 225 | 67 | 249 | 3.82e-83 | 248 |
| Msa1462510 | MtrunA17_Chr7g0270991 | 63.492 | 189 | 64 | 2 | 37 | 225 | 76 | 259 | 5.58e-83 | 248 |
| Msa1462510 | MtrunA17_Chr3g0104751 | 60.989 | 182 | 60 | 3 | 51 | 225 | 26 | 203 | 5.13e-71 | 215 |
| Msa1462510 | MtrunA17_Chr3g0145501 | 59.649 | 171 | 58 | 3 | 60 | 223 | 13 | 179 | 6.32e-66 | 202 |
| Msa1462510 | MtrunA17_Chr3g0113441 | 60.345 | 174 | 58 | 3 | 57 | 223 | 62 | 231 | 7.18e-65 | 201 |
| Msa1462510 | MtrunA17_Chr7g0274841 | 57.895 | 171 | 61 | 3 | 60 | 223 | 5 | 171 | 1.79e-64 | 197 |
| Msa1462510 | MtrunA17_Chr4g0038431 | 59.195 | 174 | 60 | 3 | 57 | 223 | 2 | 171 | 2.36e-64 | 197 |
| Msa1462510 | MtrunA17_Chr8g0374621 | 55.814 | 172 | 65 | 2 | 60 | 223 | 5 | 173 | 5.23e-58 | 187 |
| Msa1462510 | MtrunA17_Chr8g0353571 | 54.438 | 169 | 68 | 3 | 61 | 223 | 20 | 185 | 2.67e-56 | 177 |
| Msa1462510 | MtrunA17_Chr4g0037281 | 50.829 | 181 | 80 | 2 | 51 | 224 | 38 | 216 | 2.89e-56 | 178 |
| Msa1462510 | MtrunA17_Chr4g0045321 | 53.757 | 173 | 69 | 2 | 60 | 224 | 5 | 174 | 4.04e-56 | 182 |
| Msa1462510 | MtrunA17_Chr7g0260441 | 55.172 | 174 | 66 | 3 | 61 | 226 | 9 | 178 | 1.27e-53 | 182 |
| Msa1462510 | MtrunA17_Chr2g0321111 | 52.778 | 144 | 63 | 3 | 75 | 217 | 470 | 609 | 1.52e-40 | 146 |
| Msa1462510 | MtrunA17_Chr7g0266721 | 47.917 | 144 | 70 | 4 | 75 | 217 | 18 | 157 | 8.19e-37 | 127 |
| Msa1462510 | MtrunA17_Chr3g0138061 | 44.444 | 171 | 83 | 3 | 61 | 223 | 12 | 178 | 4.11e-35 | 131 |
| Msa1462510 | MtrunA17_Chr8g0351571 | 47.945 | 146 | 69 | 4 | 75 | 218 | 9 | 149 | 4.98e-34 | 119 |
| Msa1462510 | MtrunA17_Chr1g0149061 | 46.000 | 150 | 67 | 4 | 61 | 201 | 9 | 153 | 2.23e-31 | 120 |
| Msa1462510 | MtrunA17_Chr3g0122871 | 53.333 | 120 | 28 | 3 | 119 | 211 | 1 | 119 | 6.47e-31 | 110 |
| Msa1462510 | MtrunA17_Chr5g0401141 | 46.528 | 144 | 72 | 4 | 76 | 218 | 354 | 493 | 7.53e-31 | 119 |
| Msa1462510 | MtrunA17_Chr6g0484281 | 39.474 | 152 | 79 | 5 | 75 | 217 | 9 | 156 | 7.17e-20 | 87.8 |
| Msa1462510 | MtrunA17_Chr2g0288371 | 42.143 | 140 | 74 | 6 | 76 | 212 | 22 | 157 | 1.14e-19 | 87.0 |
| Msa1462510 | MtrunA17_Chr8g0357591 | 38.816 | 152 | 80 | 5 | 75 | 217 | 9 | 156 | 1.40e-18 | 84.0 |
| Msa1462510 | MtrunA17_Chr2g0305071 | 29.293 | 198 | 95 | 8 | 74 | 226 | 90 | 287 | 3.59e-15 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1462510 | AT5G13120.2 | 78.977 | 176 | 37 | 0 | 51 | 226 | 78 | 253 | 3.10e-107 | 309 |
| Msa1462510 | AT5G13120.1 | 78.977 | 176 | 37 | 0 | 51 | 226 | 82 | 257 | 4.53e-107 | 309 |
| Msa1462510 | AT3G62030.1 | 66.129 | 186 | 60 | 1 | 40 | 225 | 76 | 258 | 7.70e-86 | 255 |
| Msa1462510 | AT3G62030.2 | 66.129 | 186 | 60 | 1 | 40 | 225 | 129 | 311 | 4.20e-85 | 255 |
| Msa1462510 | AT3G62030.3 | 68.391 | 174 | 52 | 1 | 52 | 225 | 87 | 257 | 8.88e-85 | 253 |
| Msa1462510 | AT5G58710.1 | 58.201 | 189 | 68 | 3 | 44 | 225 | 20 | 204 | 1.77e-70 | 214 |
| Msa1462510 | AT2G29960.1 | 58.201 | 189 | 68 | 3 | 44 | 225 | 17 | 201 | 2.71e-70 | 214 |
| Msa1462510 | AT2G29960.3 | 58.201 | 189 | 68 | 3 | 44 | 225 | 17 | 201 | 2.71e-70 | 214 |
| Msa1462510 | AT2G21130.1 | 60.819 | 171 | 56 | 3 | 60 | 223 | 6 | 172 | 6.12e-68 | 207 |
| Msa1462510 | AT2G16600.1 | 60.234 | 171 | 57 | 3 | 60 | 223 | 6 | 172 | 7.14e-67 | 204 |
| Msa1462510 | AT4G38740.1 | 59.064 | 171 | 59 | 3 | 60 | 223 | 5 | 171 | 1.29e-65 | 201 |
| Msa1462510 | AT3G56070.1 | 57.310 | 171 | 62 | 3 | 60 | 223 | 5 | 171 | 5.60e-64 | 197 |
| Msa1462510 | AT3G56070.2 | 57.310 | 171 | 62 | 3 | 60 | 223 | 5 | 171 | 5.60e-64 | 197 |
| Msa1462510 | AT3G55920.1 | 56.044 | 182 | 67 | 4 | 52 | 225 | 52 | 228 | 1.56e-62 | 195 |
| Msa1462510 | AT2G29960.2 | 55.026 | 189 | 64 | 4 | 44 | 225 | 17 | 191 | 2.28e-62 | 193 |
| Msa1462510 | AT4G34870.1 | 58.480 | 171 | 60 | 3 | 60 | 223 | 5 | 171 | 3.24e-62 | 192 |
| Msa1462510 | AT2G15790.1 | 56.069 | 173 | 65 | 2 | 60 | 224 | 5 | 174 | 1.60e-56 | 184 |
| Msa1462510 | AT2G38730.1 | 54.438 | 169 | 68 | 3 | 61 | 223 | 34 | 199 | 3.61e-56 | 177 |
| Msa1462510 | AT2G16600.2 | 55.488 | 164 | 54 | 3 | 60 | 223 | 6 | 150 | 8.11e-56 | 175 |
| Msa1462510 | AT4G34960.1 | 49.744 | 195 | 83 | 3 | 42 | 224 | 25 | 216 | 4.60e-55 | 176 |
| Msa1462510 | AT3G63400.2 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 7.91e-54 | 177 |
| Msa1462510 | AT3G63400.3 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1462510 | AT3G63400.4 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1462510 | AT3G63400.1 | 57.647 | 170 | 60 | 3 | 61 | 222 | 9 | 174 | 2.83e-52 | 177 |
| Msa1462510 | AT3G44600.1 | 52.778 | 144 | 63 | 3 | 75 | 217 | 484 | 623 | 1.15e-40 | 147 |
| Msa1462510 | AT4G34960.2 | 50.667 | 150 | 59 | 3 | 42 | 179 | 25 | 171 | 2.37e-40 | 136 |
| Msa1462510 | AT2G36130.1 | 46.528 | 144 | 72 | 4 | 75 | 217 | 18 | 157 | 1.32e-37 | 129 |
| Msa1462510 | AT1G01940.1 | 46.897 | 145 | 72 | 4 | 75 | 218 | 9 | 149 | 2.14e-35 | 123 |
| Msa1462510 | AT3G22920.1 | 44.828 | 174 | 75 | 7 | 60 | 223 | 5 | 167 | 5.51e-32 | 117 |
| Msa1462510 | AT5G67530.1 | 46.154 | 143 | 72 | 4 | 76 | 217 | 353 | 491 | 1.77e-31 | 121 |
| Msa1462510 | AT4G32420.1 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1462510 | AT4G32420.5 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1462510 | AT4G32420.3 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1462510 | AT4G32420.6 | 41.243 | 177 | 90 | 4 | 56 | 223 | 4 | 175 | 5.06e-28 | 111 |
| Msa1462510 | AT4G32420.4 | 41.935 | 155 | 77 | 3 | 56 | 201 | 4 | 154 | 3.59e-26 | 106 |
| Msa1462510 | AT1G53720.2 | 39.474 | 152 | 79 | 5 | 75 | 217 | 9 | 156 | 1.03e-22 | 94.7 |
| Msa1462510 | AT4G33060.1 | 43.262 | 141 | 71 | 7 | 76 | 212 | 22 | 157 | 3.48e-22 | 94.7 |
| Msa1462510 | AT1G53720.1 | 40.132 | 152 | 78 | 5 | 75 | 217 | 9 | 156 | 7.59e-22 | 93.6 |
| Msa1462510 | AT2G47320.1 | 32.653 | 147 | 82 | 6 | 76 | 217 | 87 | 221 | 7.87e-11 | 60.5 |
Find 82 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACTGATTGTCACCTTCTTT+AGG | 0.241303 | tig0042327:-10951 | Msa1462510:intergenic |
| GATCAGAGGCATGTTGTATT+TGG | 0.249985 | tig0042327:+10859 | Msa1462510:CDS |
| ACTGATTGTCACCTTCTTTA+GGG | 0.273487 | tig0042327:-10950 | Msa1462510:intergenic |
| TGGAAGGCATGGACATTGTT+AGG | 0.314434 | tig0042327:+10890 | Msa1462510:CDS |
| TAGGTCCTAGTATGAAAATA+AGG | 0.319359 | tig0042327:-11109 | Msa1462510:intergenic |
| CAAGGAGGAGACTTTGATAA+AGG | 0.345816 | tig0042327:+10336 | Msa1462510:CDS |
| TGTTGTATTTGGCCAAGTTT+TGG | 0.352436 | tig0042327:+10870 | Msa1462510:CDS |
| AATAGTTGGTAAAAGTTTGT+AGG | 0.370817 | tig0042327:-11128 | Msa1462510:intergenic |
| TCCACCAGTGAGAAGGGCTT+TGG | 0.372862 | tig0042327:+10267 | Msa1462510:CDS |
| CCAACTATTTGTATTCTAGT+AGG | 0.384001 | tig0042327:+11142 | Msa1462510:three_prime_UTR |
| ATCTATCTATCGCAGGGAAC+TGG | 0.385423 | tig0042327:+10428 | Msa1462510:intron |
| AACAAAACATGTCAAGCAAT+TGG | 0.393584 | tig0042327:-10988 | Msa1462510:intergenic |
| CTTCCAACCAGCTTCCCAAC+TGG | 0.403156 | tig0042327:-10183 | Msa1462510:intergenic |
| AGTAGGAATTAGTATCGTAT+TGG | 0.409412 | tig0042327:+11159 | Msa1462510:three_prime_UTR |
| GCATCTCCGTCGGGGTGGTT+AGG | 0.409454 | tig0042327:+10013 | Msa1462510:CDS |
| GGAAGTTCTCAACAGTTTGC+GGG | 0.417261 | tig0042327:-10236 | Msa1462510:intergenic |
| TTCTTTGTTTCTTGCTGCTG+AGG | 0.427286 | tig0042327:+11023 | Msa1462510:three_prime_UTR |
| AAAGTGAGGGCTGTGGAAAA+TGG | 0.427415 | tig0042327:+10084 | Msa1462510:CDS |
| GTATTCTTTGATGTTAGTAT+TGG | 0.430298 | tig0042327:+10156 | Msa1462510:CDS |
| AACTGACTCCCATTGGTGTT+GGG | 0.430322 | tig0042327:-10721 | Msa1462510:intergenic |
| GGTGGTTAGGTCCCGAGGTG+TGG | 0.434983 | tig0042327:+10026 | Msa1462510:CDS |
| AGGATTGTGATAGGACTCTT+TGG | 0.436041 | tig0042327:+10204 | Msa1462510:CDS |
| GCCCTTCTCACTGGTGGAAA+GGG | 0.436297 | tig0042327:-10262 | Msa1462510:intergenic |
| GTAGGAATTAGTATCGTATT+GGG | 0.442760 | tig0042327:+11160 | Msa1462510:three_prime_UTR |
| GTGGTTAGGTCCCGAGGTGT+GGG | 0.453738 | tig0042327:+10027 | Msa1462510:CDS |
| TGGAAATCCAGTTGGGAAGC+TGG | 0.456366 | tig0042327:+10176 | Msa1462510:CDS |
| TGCCCTTTCCACCAGTGAGA+AGG | 0.468665 | tig0042327:+10260 | Msa1462510:CDS |
| CTAAAAGAAGCATCTCCGTC+GGG | 0.471283 | tig0042327:+10004 | Msa1462510:CDS |
| TGTCCATGCCTTCCAAAACT+TGG | 0.486542 | tig0042327:-10882 | Msa1462510:intergenic |
| ACTGGAGGCAAAAGTATCTC+TGG | 0.489609 | tig0042327:+10446 | Msa1462510:CDS |
| AGCCCTTCTCACTGGTGGAA+AGG | 0.493291 | tig0042327:-10263 | Msa1462510:intergenic |
| ATCAAGGACTTCATGATTCA+AGG | 0.494593 | tig0042327:+10318 | Msa1462510:CDS |
| ACATTGGCAGACGCTGTGGC+TGG | 0.505086 | tig0042327:+10837 | Msa1462510:intron |
| GCCCTTTCCACCAGTGAGAA+GGG | 0.506529 | tig0042327:+10261 | Msa1462510:CDS |
| CATGCTAACAGCTCCTGGTC+CGG | 0.506814 | tig0042327:-10686 | Msa1462510:intergenic |
| ATGCTGGTCCCAACACCAAT+GGG | 0.515041 | tig0042327:+10713 | Msa1462510:CDS |
| CACCTTCCATCGCGTCATCA+AGG | 0.515078 | tig0042327:+10302 | Msa1462510:CDS |
| GTTAGTATTGGAAATCCAGT+TGG | 0.515418 | tig0042327:+10168 | Msa1462510:CDS |
| CCAGTGTCTCATACCGGACC+AGG | 0.515423 | tig0042327:+10673 | Msa1462510:intron |
| TGTTAGGTCGATTGAATCAC+GGG | 0.517014 | tig0042327:+10906 | Msa1462510:CDS |
| AGGTCCTAGTATGAAAATAA+GGG | 0.519396 | tig0042327:-11108 | Msa1462510:intergenic |
| CCTACTAGAATACAAATAGT+TGG | 0.525592 | tig0042327:-11142 | Msa1462510:intergenic |
| CTGATTGTCACCTTCTTTAG+GGG | 0.526723 | tig0042327:-10949 | Msa1462510:intergenic |
| CGGAAGTTCTCAACAGTTTG+CGG | 0.530427 | tig0042327:-10237 | Msa1462510:intergenic |
| TTTGCCATGCTAACAGCTCC+TGG | 0.534982 | tig0042327:-10691 | Msa1462510:intergenic |
| GCTGTTAGCATGGCAAATGC+TGG | 0.538859 | tig0042327:+10697 | Msa1462510:CDS |
| TAGTTTCACACCCACACCTC+GGG | 0.541866 | tig0042327:-10037 | Msa1462510:intergenic |
| AATGCTGGTCCCAACACCAA+TGG | 0.549301 | tig0042327:+10712 | Msa1462510:CDS |
| GCCAAAGCCCTTCTCACTGG+TGG | 0.549951 | tig0042327:-10268 | Msa1462510:intergenic |
| GTAGCCAAAGCCCTTCTCAC+TGG | 0.550204 | tig0042327:-10271 | Msa1462510:intergenic |
| CAGTTGGGAAGCTGGTTGGA+AGG | 0.554098 | tig0042327:+10184 | Msa1462510:CDS |
| TTAGTATTGGAAATCCAGTT+GGG | 0.555401 | tig0042327:+10169 | Msa1462510:CDS |
| CTTGATGACGCGATGGAAGG+TGG | 0.555450 | tig0042327:-10301 | Msa1462510:intergenic |
| CTGGTTGGAAGGATTGTGAT+AGG | 0.560590 | tig0042327:+10195 | Msa1462510:CDS |
| AAACTGACTCCCATTGGTGT+TGG | 0.561474 | tig0042327:-10722 | Msa1462510:intergenic |
| TGGTGATCGTCCCCTAAAGA+AGG | 0.561937 | tig0042327:+10939 | Msa1462510:CDS |
| AATCCAGTTGGGAAGCTGGT+TGG | 0.562899 | tig0042327:+10180 | Msa1462510:CDS |
| AGACGCTGTGGCTGGATCAG+AGG | 0.565181 | tig0042327:+10845 | Msa1462510:intron |
| GTCGGGGTGGTTAGGTCCCG+AGG | 0.565995 | tig0042327:+10021 | Msa1462510:CDS |
| TTGTTAGGTCGATTGAATCA+CGG | 0.592054 | tig0042327:+10905 | Msa1462510:CDS |
| TCTCACTGGTGGAAAGGGCA+CGG | 0.601235 | tig0042327:-10257 | Msa1462510:intergenic |
| CGGACCAGGAGCTGTTAGCA+TGG | 0.603520 | tig0042327:+10687 | Msa1462510:CDS |
| CCTAAAAGAAGCATCTCCGT+CGG | 0.606730 | tig0042327:+10003 | Msa1462510:CDS |
| ACAAGTGAAAGTGAGGGCTG+TGG | 0.614839 | tig0042327:+10077 | Msa1462510:CDS |
| CATGACATTGGCAGACGCTG+TGG | 0.616067 | tig0042327:+10833 | Msa1462510:intron |
| CTAGTTTCACACCCACACCT+CGG | 0.617486 | tig0042327:-10038 | Msa1462510:intergenic |
| TACGACGACAAGTGAAAGTG+AGG | 0.618754 | tig0042327:+10070 | Msa1462510:CDS |
| GTCCTTGATGACGCGATGGA+AGG | 0.624852 | tig0042327:-10304 | Msa1462510:intergenic |
| TGAAGTCCTTGATGACGCGA+TGG | 0.626809 | tig0042327:-10308 | Msa1462510:intergenic |
| ATATCTCCAGTGTCTCATAC+CGG | 0.627003 | tig0042327:+10667 | Msa1462510:intron |
| GATGACGCGATGGAAGGTGG+AGG | 0.631465 | tig0042327:-10298 | Msa1462510:intergenic |
| GTGGGTGTGAAACTAGCAGT+AGG | 0.631670 | tig0042327:+10045 | Msa1462510:CDS |
| TATCTATCGCAGGGAACTGG+AGG | 0.635120 | tig0042327:+10431 | Msa1462510:intron |
| GGAAAATGGTAGTAGTTCAG+AGG | 0.650163 | tig0042327:+10098 | Msa1462510:CDS |
| GAATCACGGGAGACTGATCG+TGG | 0.651487 | tig0042327:+10919 | Msa1462510:CDS |
| TCGGGACCTAACCACCCCGA+CGG | 0.658560 | tig0042327:-10019 | Msa1462510:intergenic |
| AAGAAGCATCTCCGTCGGGG+TGG | 0.659605 | tig0042327:+10008 | Msa1462510:CDS |
| TCCTAGTATGAAAATAAGGG+AGG | 0.672935 | tig0042327:-11105 | Msa1462510:intergenic |
| AAGGTGACAATCAGTGACTG+TGG | 0.689468 | tig0042327:+10958 | Msa1462510:CDS |
| TAAAAGAAGCATCTCCGTCG+GGG | 0.693386 | tig0042327:+10005 | Msa1462510:CDS |
| ACGACGACAAGTGAAAGTGA+GGG | 0.705755 | tig0042327:+10071 | Msa1462510:CDS |
| AAGGACTTCATGATTCAAGG+AGG | 0.745105 | tig0042327:+10321 | Msa1462510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATCATAAACATTTTTTA+AGG | - | tig0042327:9449-9468 | Msa1462510:intergenic | 10.0% |
| !!! | AGATTATAATTATCAATTTT+TGG | + | tig0042327:9709-9728 | Msa1462510:intron | 10.0% |
| !!! | ATTATCATAAACATTTTTTA+AGG | - | tig0042327:9449-9468 | Msa1462510:intergenic | 10.0% |
| !!! | AGATTATAATTATCAATTTT+TGG | + | tig0042327:9709-9728 | Msa1462510:intron | 10.0% |
| !! | TCACTGATAATATATATATA+TGG | + | tig0042327:9281-9300 | Msa1462510:intron | 15.0% |
| !! | TATATATGGAAAATGATATT+TGG | + | tig0042327:9295-9314 | Msa1462510:intron | 15.0% |
| !! | TTATGATAATACATAGAATT+TGG | + | tig0042327:9459-9478 | Msa1462510:intron | 15.0% |
| !!! | ATTTAATGTGTATATGTTTT+AGG | + | tig0042327:9490-9509 | Msa1462510:intron | 15.0% |
| !! | CAATAATCTATAAAACATAT+GGG | - | tig0042327:9669-9688 | Msa1462510:intergenic | 15.0% |
| !! | ACAATAATCTATAAAACATA+TGG | - | tig0042327:9670-9689 | Msa1462510:intergenic | 15.0% |
| !! | CATCAATTAAATTTAAGTAA+TGG | - | tig0042327:9902-9921 | Msa1462510:intergenic | 15.0% |
| !!! | ATAAGTTGATGAATAAAAAA+AGG | - | tig0042327:10398-10417 | Msa1462510:intergenic | 15.0% |
| !! | TCACTGATAATATATATATA+TGG | + | tig0042327:9281-9300 | Msa1462510:intron | 15.0% |
| !! | TATATATGGAAAATGATATT+TGG | + | tig0042327:9295-9314 | Msa1462510:intron | 15.0% |
| !! | TTATGATAATACATAGAATT+TGG | + | tig0042327:9459-9478 | Msa1462510:intron | 15.0% |
| !!! | ATTTAATGTGTATATGTTTT+AGG | + | tig0042327:9490-9509 | Msa1462510:intron | 15.0% |
| !! | CAATAATCTATAAAACATAT+GGG | - | tig0042327:9669-9688 | Msa1462510:intergenic | 15.0% |
| !! | ACAATAATCTATAAAACATA+TGG | - | tig0042327:9670-9689 | Msa1462510:intergenic | 15.0% |
| !! | CATCAATTAAATTTAAGTAA+TGG | - | tig0042327:9902-9921 | Msa1462510:intergenic | 15.0% |
| !!! | ATAAGTTGATGAATAAAAAA+AGG | - | tig0042327:10398-10417 | Msa1462510:intergenic | 15.0% |
| !! | TACACTGATATTAGTTAATA+TGG | + | tig0042327:9419-9438 | Msa1462510:intron | 20.0% |
| !!! | TATCAATTTTTGGTTTCAAT+TGG | + | tig0042327:9719-9738 | Msa1462510:intron | 20.0% |
| !!! | CAAAGAAAATTTTAATGATC+AGG | - | tig0042327:9750-9769 | Msa1462510:intergenic | 20.0% |
| !!! | CTGATCATTAAAATTTTCTT+TGG | + | tig0042327:9748-9767 | Msa1462510:intron | 20.0% |
| !!! | GTTTTTTATACGAAATATCA+CGG | - | tig0042327:9837-9856 | Msa1462510:intergenic | 20.0% |
| !! | TATTAATTGATTGATTGTCT+TGG | + | tig0042327:9935-9954 | Msa1462510:intron | 20.0% |
| !! | AATAAAATAAACACAGTGAA+GGG | - | tig0042327:10569-10588 | Msa1462510:intergenic | 20.0% |
| !! | AAATAAAATAAACACAGTGA+AGG | - | tig0042327:10570-10589 | Msa1462510:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | + | tig0042327:10591-10610 | Msa1462510:intron | 20.0% |
| !! | TACACTGATATTAGTTAATA+TGG | + | tig0042327:9419-9438 | Msa1462510:intron | 20.0% |
| !!! | TATCAATTTTTGGTTTCAAT+TGG | + | tig0042327:9719-9738 | Msa1462510:intron | 20.0% |
| !!! | CAAAGAAAATTTTAATGATC+AGG | - | tig0042327:9750-9769 | Msa1462510:intergenic | 20.0% |
| !!! | CTGATCATTAAAATTTTCTT+TGG | + | tig0042327:9748-9767 | Msa1462510:intron | 20.0% |
| !!! | GTTTTTTATACGAAATATCA+CGG | - | tig0042327:9837-9856 | Msa1462510:intergenic | 20.0% |
| !! | TATTAATTGATTGATTGTCT+TGG | + | tig0042327:9935-9954 | Msa1462510:intron | 20.0% |
| !! | AATAAAATAAACACAGTGAA+GGG | - | tig0042327:10569-10588 | Msa1462510:intergenic | 20.0% |
| !! | AAATAAAATAAACACAGTGA+AGG | - | tig0042327:10570-10589 | Msa1462510:intergenic | 20.0% |
| !!! | AGTTTAGTTTAGTTTAGTTT+AGG | + | tig0042327:10591-10610 | Msa1462510:intron | 20.0% |
| !!! | TTGAGTTGAATAGATAGATT+AGG | + | tig0042327:9141-9160 | Msa1462510:intron | 25.0% |
| ! | TATATTATCAGTGAGAAAAG+TGG | - | tig0042327:9275-9294 | Msa1462510:intergenic | 25.0% |
| ! | ATGGAAAATGATATTTGGTA+CGG | + | tig0042327:9300-9319 | Msa1462510:intron | 25.0% |
| ! | GATTATTGTCACAAATAAAG+TGG | + | tig0042327:9681-9700 | Msa1462510:intron | 25.0% |
| ! | GTATTCTTTGATGTTAGTAT+TGG | + | tig0042327:10156-10175 | Msa1462510:CDS | 25.0% |
| !! | GTTGATGAATAAAAAAAGGA+AGG | - | tig0042327:10394-10413 | Msa1462510:intergenic | 25.0% |
| ! | ATAAAATAAACACAGTGAAG+GGG | - | tig0042327:10568-10587 | Msa1462510:intergenic | 25.0% |
| ! | ATTCTTCTATTCTCTCTTAT+CGG | + | tig0042327:10769-10788 | Msa1462510:intron | 25.0% |
| !!! | AATAGTTGGTAAAAGTTTGT+AGG | - | tig0042327:11131-11150 | Msa1462510:intergenic | 25.0% |
| !!! | TTGAGTTGAATAGATAGATT+AGG | + | tig0042327:9141-9160 | Msa1462510:intron | 25.0% |
| ! | TATATTATCAGTGAGAAAAG+TGG | - | tig0042327:9275-9294 | Msa1462510:intergenic | 25.0% |
| ! | ATGGAAAATGATATTTGGTA+CGG | + | tig0042327:9300-9319 | Msa1462510:intron | 25.0% |
| ! | GATTATTGTCACAAATAAAG+TGG | + | tig0042327:9681-9700 | Msa1462510:intron | 25.0% |
| ! | GTATTCTTTGATGTTAGTAT+TGG | + | tig0042327:10156-10175 | Msa1462510:CDS | 25.0% |
| !! | GTTGATGAATAAAAAAAGGA+AGG | - | tig0042327:10394-10413 | Msa1462510:intergenic | 25.0% |
| ! | ATAAAATAAACACAGTGAAG+GGG | - | tig0042327:10568-10587 | Msa1462510:intergenic | 25.0% |
| ! | ATTCTTCTATTCTCTCTTAT+CGG | + | tig0042327:10769-10788 | Msa1462510:intron | 25.0% |
| !!! | AATAGTTGGTAAAAGTTTGT+AGG | - | tig0042327:11131-11150 | Msa1462510:intergenic | 25.0% |
| TGGAAAATGATATTTGGTAC+GGG | + | tig0042327:9301-9320 | Msa1462510:intron | 30.0% | |
| GATTTGCATACGAAAATTCA+CGG | + | tig0042327:9325-9344 | Msa1462510:intron | 30.0% | |
| ! | TGCAATTTTCATTATGTTCC+TGG | + | tig0042327:9377-9396 | Msa1462510:intron | 30.0% |
| ATTAAATCCATAGTACATCC+AGG | - | tig0042327:9398-9417 | Msa1462510:intergenic | 30.0% | |
| !! | ATGTTTTAGGTCATGTTAAC+AGG | + | tig0042327:9503-9522 | Msa1462510:intron | 30.0% |
| ACATATGGGTAATGTTAATC+AGG | - | tig0042327:9655-9674 | Msa1462510:intergenic | 30.0% | |
| !!! | ATTTTTGGTTTCAATTGGTG+TGG | + | tig0042327:9724-9743 | Msa1462510:intron | 30.0% |
| CATGGAAAGTAAGCATTAAT+AGG | + | tig0042327:9808-9827 | Msa1462510:intron | 30.0% | |
| TAGAGGATTGCTATATAGTA+CGG | - | tig0042327:9862-9881 | Msa1462510:intergenic | 30.0% | |
| AATTGATTGATTGTCTTGGT+TGG | + | tig0042327:9939-9958 | Msa1462510:intron | 30.0% | |
| ATTGATTGATTGTCTTGGTT+GGG | + | tig0042327:9940-9959 | Msa1462510:intron | 30.0% | |
| ! | TTAGTATTGGAAATCCAGTT+GGG | + | tig0042327:10169-10188 | Msa1462510:CDS | 30.0% |
| TAAAATAAACACAGTGAAGG+GGG | - | tig0042327:10567-10586 | Msa1462510:intergenic | 30.0% | |
| ACTTAATTGTCTCATGACAT+TGG | + | tig0042327:10821-10840 | Msa1462510:intron | 30.0% | |
| AACAAAACATGTCAAGCAAT+TGG | - | tig0042327:10991-11010 | Msa1462510:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | tig0042327:10997-11016 | Msa1462510:exon | 30.0% |
| CAAACAAAAAATTGAGAGAG+CGG | - | tig0042327:11063-11082 | Msa1462510:intergenic | 30.0% | |
| AGGTCCTAGTATGAAAATAA+GGG | - | tig0042327:11111-11130 | Msa1462510:intergenic | 30.0% | |
| TAGGTCCTAGTATGAAAATA+AGG | - | tig0042327:11112-11131 | Msa1462510:intergenic | 30.0% | |
| CCTACTAGAATACAAATAGT+TGG | - | tig0042327:11145-11164 | Msa1462510:intergenic | 30.0% | |
| CCAACTATTTGTATTCTAGT+AGG | + | tig0042327:11142-11161 | Msa1462510:three_prime_UTR | 30.0% | |
| AGTAGGAATTAGTATCGTAT+TGG | + | tig0042327:11159-11178 | Msa1462510:three_prime_UTR | 30.0% | |
| GTAGGAATTAGTATCGTATT+GGG | + | tig0042327:11160-11179 | Msa1462510:three_prime_UTR | 30.0% | |
| TGGAAAATGATATTTGGTAC+GGG | + | tig0042327:9301-9320 | Msa1462510:intron | 30.0% | |
| GATTTGCATACGAAAATTCA+CGG | + | tig0042327:9325-9344 | Msa1462510:intron | 30.0% | |
| ! | TGCAATTTTCATTATGTTCC+TGG | + | tig0042327:9377-9396 | Msa1462510:intron | 30.0% |
| ATTAAATCCATAGTACATCC+AGG | - | tig0042327:9398-9417 | Msa1462510:intergenic | 30.0% | |
| !! | ATGTTTTAGGTCATGTTAAC+AGG | + | tig0042327:9503-9522 | Msa1462510:intron | 30.0% |
| ACATATGGGTAATGTTAATC+AGG | - | tig0042327:9655-9674 | Msa1462510:intergenic | 30.0% | |
| !!! | ATTTTTGGTTTCAATTGGTG+TGG | + | tig0042327:9724-9743 | Msa1462510:intron | 30.0% |
| CATGGAAAGTAAGCATTAAT+AGG | + | tig0042327:9808-9827 | Msa1462510:intron | 30.0% | |
| TAGAGGATTGCTATATAGTA+CGG | - | tig0042327:9862-9881 | Msa1462510:intergenic | 30.0% | |
| AATTGATTGATTGTCTTGGT+TGG | + | tig0042327:9939-9958 | Msa1462510:intron | 30.0% | |
| ATTGATTGATTGTCTTGGTT+GGG | + | tig0042327:9940-9959 | Msa1462510:intron | 30.0% | |
| ! | TTAGTATTGGAAATCCAGTT+GGG | + | tig0042327:10169-10188 | Msa1462510:CDS | 30.0% |
| TAAAATAAACACAGTGAAGG+GGG | - | tig0042327:10567-10586 | Msa1462510:intergenic | 30.0% | |
| ACTTAATTGTCTCATGACAT+TGG | + | tig0042327:10821-10840 | Msa1462510:intron | 30.0% | |
| AACAAAACATGTCAAGCAAT+TGG | - | tig0042327:10991-11010 | Msa1462510:intergenic | 30.0% | |
| !!! | TGACATGTTTTGTTTTCTCA+TGG | + | tig0042327:10997-11016 | Msa1462510:exon | 30.0% |
| CAAACAAAAAATTGAGAGAG+CGG | - | tig0042327:11063-11082 | Msa1462510:intergenic | 30.0% | |
| AGGTCCTAGTATGAAAATAA+GGG | - | tig0042327:11111-11130 | Msa1462510:intergenic | 30.0% | |
| TAGGTCCTAGTATGAAAATA+AGG | - | tig0042327:11112-11131 | Msa1462510:intergenic | 30.0% | |
| CCTACTAGAATACAAATAGT+TGG | - | tig0042327:11145-11164 | Msa1462510:intergenic | 30.0% | |
| CCAACTATTTGTATTCTAGT+AGG | + | tig0042327:11142-11161 | Msa1462510:three_prime_UTR | 30.0% | |
| AGTAGGAATTAGTATCGTAT+TGG | + | tig0042327:11159-11178 | Msa1462510:three_prime_UTR | 30.0% | |
| TCTATTCAACTCAAACCCAA+AGG | - | tig0042327:9135-9154 | Msa1462510:intergenic | 35.0% | |
| ATTATCAGTGAGAAAAGTGG+CGG | - | tig0042327:9272-9291 | Msa1462510:intergenic | 35.0% | |
| ! | CGTTGAAATTGCATGTTTTC+AGG | - | tig0042327:9354-9373 | Msa1462510:intergenic | 35.0% |
| TTATGTTCCTGGATGTACTA+TGG | + | tig0042327:9388-9407 | Msa1462510:intron | 35.0% | |
| ! | TTTTCCTTAACCAATGTCCT+AGG | - | tig0042327:9532-9551 | Msa1462510:intergenic | 35.0% |
| !!! | CTTCTTTTAGGGTTAGGATT+AGG | - | tig0042327:9994-10013 | Msa1462510:intergenic | 35.0% |
| ! | GTTAGTATTGGAAATCCAGT+TGG | + | tig0042327:10168-10187 | Msa1462510:CDS | 35.0% |
| ATCAAGGACTTCATGATTCA+AGG | + | tig0042327:10318-10337 | Msa1462510:CDS | 35.0% | |
| TCTATCTATCTATCTATCGC+AGG | + | tig0042327:10421-10440 | Msa1462510:intron | 35.0% | |
| CTATCTATCTATCTATCGCA+GGG | + | tig0042327:10422-10441 | Msa1462510:intron | 35.0% | |
| ! | TATGAAAAACTGACTCCCAT+TGG | - | tig0042327:10731-10750 | Msa1462510:intergenic | 35.0% |
| ! | TGTTGTATTTGGCCAAGTTT+TGG | + | tig0042327:10870-10889 | Msa1462510:CDS | 35.0% |
| TTGTTAGGTCGATTGAATCA+CGG | + | tig0042327:10905-10924 | Msa1462510:CDS | 35.0% | |
| ACTGATTGTCACCTTCTTTA+GGG | - | tig0042327:10953-10972 | Msa1462510:intergenic | 35.0% | |
| !!! | ACCTCCCTTATTTTCATACT+AGG | + | tig0042327:11104-11123 | Msa1462510:three_prime_UTR | 35.0% |
| TCCTAGTATGAAAATAAGGG+AGG | - | tig0042327:11108-11127 | Msa1462510:intergenic | 35.0% | |
| TCTATTCAACTCAAACCCAA+AGG | - | tig0042327:9135-9154 | Msa1462510:intergenic | 35.0% | |
| ATTATCAGTGAGAAAAGTGG+CGG | - | tig0042327:9272-9291 | Msa1462510:intergenic | 35.0% | |
| ! | CGTTGAAATTGCATGTTTTC+AGG | - | tig0042327:9354-9373 | Msa1462510:intergenic | 35.0% |
| TTATGTTCCTGGATGTACTA+TGG | + | tig0042327:9388-9407 | Msa1462510:intron | 35.0% | |
| ! | TTTTCCTTAACCAATGTCCT+AGG | - | tig0042327:9532-9551 | Msa1462510:intergenic | 35.0% |
| !!! | CTTCTTTTAGGGTTAGGATT+AGG | - | tig0042327:9994-10013 | Msa1462510:intergenic | 35.0% |
| ! | GTTAGTATTGGAAATCCAGT+TGG | + | tig0042327:10168-10187 | Msa1462510:CDS | 35.0% |
| ATCAAGGACTTCATGATTCA+AGG | + | tig0042327:10318-10337 | Msa1462510:CDS | 35.0% | |
| TCTATCTATCTATCTATCGC+AGG | + | tig0042327:10421-10440 | Msa1462510:intron | 35.0% | |
| CTATCTATCTATCTATCGCA+GGG | + | tig0042327:10422-10441 | Msa1462510:intron | 35.0% | |
| ! | TATGAAAAACTGACTCCCAT+TGG | - | tig0042327:10731-10750 | Msa1462510:intergenic | 35.0% |
| ! | TGTTGTATTTGGCCAAGTTT+TGG | + | tig0042327:10870-10889 | Msa1462510:CDS | 35.0% |
| TTGTTAGGTCGATTGAATCA+CGG | + | tig0042327:10905-10924 | Msa1462510:CDS | 35.0% | |
| ACTGATTGTCACCTTCTTTA+GGG | - | tig0042327:10953-10972 | Msa1462510:intergenic | 35.0% | |
| !!! | ACCTCCCTTATTTTCATACT+AGG | + | tig0042327:11104-11123 | Msa1462510:three_prime_UTR | 35.0% |
| TCCTAGTATGAAAATAAGGG+AGG | - | tig0042327:11108-11127 | Msa1462510:intergenic | 35.0% | |
| TTCAACTCAAACCCAAAGGA+TGG | - | tig0042327:9131-9150 | Msa1462510:intergenic | 40.0% | |
| ATCCTTCCTTCCTTCTTCTT+CGG | + | tig0042327:9199-9218 | Msa1462510:intron | 40.0% | |
| ! | TGTTTTCTTAACCAGTGCTC+TGG | + | tig0042327:9626-9645 | Msa1462510:intron | 40.0% |
| !!! | GAGATGCTTCTTTTAGGGTT+AGG | - | tig0042327:10000-10019 | Msa1462510:intergenic | 40.0% |
| GGAAAATGGTAGTAGTTCAG+AGG | + | tig0042327:10098-10117 | Msa1462510:CDS | 40.0% | |
| AGGATTGTGATAGGACTCTT+TGG | + | tig0042327:10204-10223 | Msa1462510:CDS | 40.0% | |
| AAGGACTTCATGATTCAAGG+AGG | + | tig0042327:10321-10340 | Msa1462510:CDS | 40.0% | |
| CAAGGAGGAGACTTTGATAA+AGG | + | tig0042327:10336-10355 | Msa1462510:CDS | 40.0% | |
| ATATCTCCAGTGTCTCATAC+CGG | + | tig0042327:10667-10686 | Msa1462510:intron | 40.0% | |
| ! | GTTTTTCATATGCGCTGTCA+AGG | + | tig0042327:10741-10760 | Msa1462510:CDS | 40.0% |
| ! | GATCAGAGGCATGTTGTATT+TGG | + | tig0042327:10859-10878 | Msa1462510:CDS | 40.0% |
| !!! | GTATTTGGCCAAGTTTTGGA+AGG | + | tig0042327:10874-10893 | Msa1462510:CDS | 40.0% |
| TGTTAGGTCGATTGAATCAC+GGG | + | tig0042327:10906-10925 | Msa1462510:CDS | 40.0% | |
| CTGATTGTCACCTTCTTTAG+GGG | - | tig0042327:10952-10971 | Msa1462510:intergenic | 40.0% | |
| ! | CACTGATTGTCACCTTCTTT+AGG | - | tig0042327:10954-10973 | Msa1462510:intergenic | 40.0% |
| ! | TTCTTTGTTTCTTGCTGCTG+AGG | + | tig0042327:11023-11042 | Msa1462510:three_prime_UTR | 40.0% |
| TTCAACTCAAACCCAAAGGA+TGG | - | tig0042327:9131-9150 | Msa1462510:intergenic | 40.0% | |
| ATCCTTCCTTCCTTCTTCTT+CGG | + | tig0042327:9199-9218 | Msa1462510:intron | 40.0% | |
| ! | TGTTTTCTTAACCAGTGCTC+TGG | + | tig0042327:9626-9645 | Msa1462510:intron | 40.0% |
| !!! | GAGATGCTTCTTTTAGGGTT+AGG | - | tig0042327:10000-10019 | Msa1462510:intergenic | 40.0% |
| GGAAAATGGTAGTAGTTCAG+AGG | + | tig0042327:10098-10117 | Msa1462510:CDS | 40.0% | |
| AGGATTGTGATAGGACTCTT+TGG | + | tig0042327:10204-10223 | Msa1462510:CDS | 40.0% | |
| AAGGACTTCATGATTCAAGG+AGG | + | tig0042327:10321-10340 | Msa1462510:CDS | 40.0% | |
| CAAGGAGGAGACTTTGATAA+AGG | + | tig0042327:10336-10355 | Msa1462510:CDS | 40.0% | |
| ATATCTCCAGTGTCTCATAC+CGG | + | tig0042327:10667-10686 | Msa1462510:intron | 40.0% | |
| ! | GTTTTTCATATGCGCTGTCA+AGG | + | tig0042327:10741-10760 | Msa1462510:CDS | 40.0% |
| ! | GATCAGAGGCATGTTGTATT+TGG | + | tig0042327:10859-10878 | Msa1462510:CDS | 40.0% |
| !!! | GTATTTGGCCAAGTTTTGGA+AGG | + | tig0042327:10874-10893 | Msa1462510:CDS | 40.0% |
| TGTTAGGTCGATTGAATCAC+GGG | + | tig0042327:10906-10925 | Msa1462510:CDS | 40.0% | |
| CTGATTGTCACCTTCTTTAG+GGG | - | tig0042327:10952-10971 | Msa1462510:intergenic | 40.0% | |
| ! | CACTGATTGTCACCTTCTTT+AGG | - | tig0042327:10954-10973 | Msa1462510:intergenic | 40.0% |
| ! | TTCTTTGTTTCTTGCTGCTG+AGG | + | tig0042327:11023-11042 | Msa1462510:three_prime_UTR | 40.0% |
| ! | ATGGTGGTGAATCCATCCTT+TGG | + | tig0042327:9116-9135 | Msa1462510:intron | 45.0% |
| ! | TGGTGGTGAATCCATCCTTT+GGG | + | tig0042327:9117-9136 | Msa1462510:intron | 45.0% |
| TCAACACCGAAGAAGAAGGA+AGG | - | tig0042327:9208-9227 | Msa1462510:intergenic | 45.0% | |
| TGGTTCAACACCGAAGAAGA+AGG | - | tig0042327:9212-9231 | Msa1462510:intergenic | 45.0% | |
| TTGAATGCAGCAACAGCCAT+CGG | - | tig0042327:9236-9255 | Msa1462510:intergenic | 45.0% | |
| GTCATGTTAACAGGTGTCCT+AGG | + | tig0042327:9512-9531 | Msa1462510:intron | 45.0% | |
| TAACAGGTGTCCTAGGACAT+TGG | + | tig0042327:9519-9538 | Msa1462510:intron | 45.0% | |
| ! | GTGTCCTAGGACATTGGTTA+AGG | + | tig0042327:9525-9544 | Msa1462510:intron | 45.0% |
| GATTGATTGTCTTGGTTGGG+TGG | + | tig0042327:9943-9962 | Msa1462510:intron | 45.0% | |
| ! | CGACGGAGATGCTTCTTTTA+GGG | - | tig0042327:10005-10024 | Msa1462510:intergenic | 45.0% |
| !! | CCTAAAAGAAGCATCTCCGT+CGG | + | tig0042327:10003-10022 | Msa1462510:CDS | 45.0% |
| !! | CTAAAAGAAGCATCTCCGTC+GGG | + | tig0042327:10004-10023 | Msa1462510:CDS | 45.0% |
| !! | TAAAAGAAGCATCTCCGTCG+GGG | + | tig0042327:10005-10024 | Msa1462510:CDS | 45.0% |
| TACGACGACAAGTGAAAGTG+AGG | + | tig0042327:10070-10089 | Msa1462510:CDS | 45.0% | |
| ACGACGACAAGTGAAAGTGA+GGG | + | tig0042327:10071-10090 | Msa1462510:CDS | 45.0% | |
| AAAGTGAGGGCTGTGGAAAA+TGG | + | tig0042327:10084-10103 | Msa1462510:CDS | 45.0% | |
| CTGGTTGGAAGGATTGTGAT+AGG | + | tig0042327:10195-10214 | Msa1462510:CDS | 45.0% | |
| GGAAGTTCTCAACAGTTTGC+GGG | - | tig0042327:10239-10258 | Msa1462510:intergenic | 45.0% | |
| CGGAAGTTCTCAACAGTTTG+CGG | - | tig0042327:10240-10259 | Msa1462510:intergenic | 45.0% | |
| ATCTATCTATCGCAGGGAAC+TGG | + | tig0042327:10428-10447 | Msa1462510:intron | 45.0% | |
| !! | ACTGGAGGCAAAAGTATCTC+TGG | + | tig0042327:10446-10465 | Msa1462510:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+GGG | - | tig0042327:10724-10743 | Msa1462510:intergenic | 45.0% |
| ! | AAACTGACTCCCATTGGTGT+TGG | - | tig0042327:10725-10744 | Msa1462510:intergenic | 45.0% |
| TGTCCATGCCTTCCAAAACT+TGG | - | tig0042327:10885-10904 | Msa1462510:intergenic | 45.0% | |
| ! | TGGAAGGCATGGACATTGTT+AGG | + | tig0042327:10890-10909 | Msa1462510:CDS | 45.0% |
| AAGGTGACAATCAGTGACTG+TGG | + | tig0042327:10958-10977 | Msa1462510:CDS | 45.0% | |
| ! | ATGGTGGTGAATCCATCCTT+TGG | + | tig0042327:9116-9135 | Msa1462510:intron | 45.0% |
| ! | TGGTGGTGAATCCATCCTTT+GGG | + | tig0042327:9117-9136 | Msa1462510:intron | 45.0% |
| TCAACACCGAAGAAGAAGGA+AGG | - | tig0042327:9208-9227 | Msa1462510:intergenic | 45.0% | |
| TGGTTCAACACCGAAGAAGA+AGG | - | tig0042327:9212-9231 | Msa1462510:intergenic | 45.0% | |
| TTGAATGCAGCAACAGCCAT+CGG | - | tig0042327:9236-9255 | Msa1462510:intergenic | 45.0% | |
| GTCATGTTAACAGGTGTCCT+AGG | + | tig0042327:9512-9531 | Msa1462510:intron | 45.0% | |
| TAACAGGTGTCCTAGGACAT+TGG | + | tig0042327:9519-9538 | Msa1462510:intron | 45.0% | |
| ! | GTGTCCTAGGACATTGGTTA+AGG | + | tig0042327:9525-9544 | Msa1462510:intron | 45.0% |
| GATTGATTGTCTTGGTTGGG+TGG | + | tig0042327:9943-9962 | Msa1462510:intron | 45.0% | |
| ! | CGACGGAGATGCTTCTTTTA+GGG | - | tig0042327:10005-10024 | Msa1462510:intergenic | 45.0% |
| !! | CCTAAAAGAAGCATCTCCGT+CGG | + | tig0042327:10003-10022 | Msa1462510:CDS | 45.0% |
| !! | CTAAAAGAAGCATCTCCGTC+GGG | + | tig0042327:10004-10023 | Msa1462510:CDS | 45.0% |
| !! | TAAAAGAAGCATCTCCGTCG+GGG | + | tig0042327:10005-10024 | Msa1462510:CDS | 45.0% |
| TACGACGACAAGTGAAAGTG+AGG | + | tig0042327:10070-10089 | Msa1462510:CDS | 45.0% | |
| ACGACGACAAGTGAAAGTGA+GGG | + | tig0042327:10071-10090 | Msa1462510:CDS | 45.0% | |
| AAAGTGAGGGCTGTGGAAAA+TGG | + | tig0042327:10084-10103 | Msa1462510:CDS | 45.0% | |
| CTGGTTGGAAGGATTGTGAT+AGG | + | tig0042327:10195-10214 | Msa1462510:CDS | 45.0% | |
| GGAAGTTCTCAACAGTTTGC+GGG | - | tig0042327:10239-10258 | Msa1462510:intergenic | 45.0% | |
| CGGAAGTTCTCAACAGTTTG+CGG | - | tig0042327:10240-10259 | Msa1462510:intergenic | 45.0% | |
| ATCTATCTATCGCAGGGAAC+TGG | + | tig0042327:10428-10447 | Msa1462510:intron | 45.0% | |
| !! | ACTGGAGGCAAAAGTATCTC+TGG | + | tig0042327:10446-10465 | Msa1462510:CDS | 45.0% |
| ! | AACTGACTCCCATTGGTGTT+GGG | - | tig0042327:10724-10743 | Msa1462510:intergenic | 45.0% |
| ! | AAACTGACTCCCATTGGTGT+TGG | - | tig0042327:10725-10744 | Msa1462510:intergenic | 45.0% |
| TGTCCATGCCTTCCAAAACT+TGG | - | tig0042327:10885-10904 | Msa1462510:intergenic | 45.0% | |
| ! | TGGAAGGCATGGACATTGTT+AGG | + | tig0042327:10890-10909 | Msa1462510:CDS | 45.0% |
| AAGGTGACAATCAGTGACTG+TGG | + | tig0042327:10958-10977 | Msa1462510:CDS | 45.0% | |
| !! | AAATATATATATATATATAG+AGG | - | tig0042327:9879-9898 | Msa1462510:intergenic | 5.0% |
| !! | AAATATATATATATATATAG+AGG | - | tig0042327:9879-9898 | Msa1462510:intergenic | 5.0% |
| TCGCGCGTGCGTTAAAATTG+AGG | - | tig0042327:9178-9197 | Msa1462510:intergenic | 50.0% | |
| CACCGAAGAAGAAGGAAGGA+AGG | - | tig0042327:9204-9223 | Msa1462510:intergenic | 50.0% | |
| !! | TTCGGTGTTGAACCAACCGA+TGG | + | tig0042327:9217-9236 | Msa1462510:intron | 50.0% |
| TAATCAGGTCTCCAGAGCAC+TGG | - | tig0042327:9640-9659 | Msa1462510:intergenic | 50.0% | |
| ACGTGTACTGTTTGAGCGCA+TGG | + | tig0042327:9790-9809 | Msa1462510:intron | 50.0% | |
| ! | CCGACGGAGATGCTTCTTTT+AGG | - | tig0042327:10006-10025 | Msa1462510:intergenic | 50.0% |
| TAGTTTCACACCCACACCTC+GGG | - | tig0042327:10040-10059 | Msa1462510:intergenic | 50.0% | |
| CTAGTTTCACACCCACACCT+CGG | - | tig0042327:10041-10060 | Msa1462510:intergenic | 50.0% | |
| GTGGGTGTGAAACTAGCAGT+AGG | + | tig0042327:10045-10064 | Msa1462510:CDS | 50.0% | |
| ACAAGTGAAAGTGAGGGCTG+TGG | + | tig0042327:10077-10096 | Msa1462510:CDS | 50.0% | |
| TGGAAATCCAGTTGGGAAGC+TGG | + | tig0042327:10176-10195 | Msa1462510:CDS | 50.0% | |
| AATCCAGTTGGGAAGCTGGT+TGG | + | tig0042327:10180-10199 | Msa1462510:CDS | 50.0% | |
| !! | TGAAGTCCTTGATGACGCGA+TGG | - | tig0042327:10311-10330 | Msa1462510:intergenic | 50.0% |
| TATCTATCGCAGGGAACTGG+AGG | + | tig0042327:10431-10450 | Msa1462510:intron | 50.0% | |
| TTTGCCATGCTAACAGCTCC+TGG | - | tig0042327:10694-10713 | Msa1462510:intergenic | 50.0% | |
| GCTGTTAGCATGGCAAATGC+TGG | + | tig0042327:10697-10716 | Msa1462510:CDS | 50.0% | |
| AATGCTGGTCCCAACACCAA+TGG | + | tig0042327:10712-10731 | Msa1462510:CDS | 50.0% | |
| ATGCTGGTCCCAACACCAAT+GGG | + | tig0042327:10713-10732 | Msa1462510:CDS | 50.0% | |
| !!! | TGGCCAAGTTTTGGAAGGCA+TGG | + | tig0042327:10879-10898 | Msa1462510:CDS | 50.0% |
| TGGTGATCGTCCCCTAAAGA+AGG | + | tig0042327:10939-10958 | Msa1462510:CDS | 50.0% | |
| TCGCGCGTGCGTTAAAATTG+AGG | - | tig0042327:9178-9197 | Msa1462510:intergenic | 50.0% | |
| CACCGAAGAAGAAGGAAGGA+AGG | - | tig0042327:9204-9223 | Msa1462510:intergenic | 50.0% | |
| !! | TTCGGTGTTGAACCAACCGA+TGG | + | tig0042327:9217-9236 | Msa1462510:intron | 50.0% |
| TAATCAGGTCTCCAGAGCAC+TGG | - | tig0042327:9640-9659 | Msa1462510:intergenic | 50.0% | |
| ACGTGTACTGTTTGAGCGCA+TGG | + | tig0042327:9790-9809 | Msa1462510:intron | 50.0% | |
| ! | CCGACGGAGATGCTTCTTTT+AGG | - | tig0042327:10006-10025 | Msa1462510:intergenic | 50.0% |
| TAGTTTCACACCCACACCTC+GGG | - | tig0042327:10040-10059 | Msa1462510:intergenic | 50.0% | |
| CTAGTTTCACACCCACACCT+CGG | - | tig0042327:10041-10060 | Msa1462510:intergenic | 50.0% | |
| GTGGGTGTGAAACTAGCAGT+AGG | + | tig0042327:10045-10064 | Msa1462510:CDS | 50.0% | |
| ACAAGTGAAAGTGAGGGCTG+TGG | + | tig0042327:10077-10096 | Msa1462510:CDS | 50.0% | |
| TGGAAATCCAGTTGGGAAGC+TGG | + | tig0042327:10176-10195 | Msa1462510:CDS | 50.0% | |
| AATCCAGTTGGGAAGCTGGT+TGG | + | tig0042327:10180-10199 | Msa1462510:CDS | 50.0% | |
| !! | TGAAGTCCTTGATGACGCGA+TGG | - | tig0042327:10311-10330 | Msa1462510:intergenic | 50.0% |
| TATCTATCGCAGGGAACTGG+AGG | + | tig0042327:10431-10450 | Msa1462510:intron | 50.0% | |
| TTTGCCATGCTAACAGCTCC+TGG | - | tig0042327:10694-10713 | Msa1462510:intergenic | 50.0% | |
| GCTGTTAGCATGGCAAATGC+TGG | + | tig0042327:10697-10716 | Msa1462510:CDS | 50.0% | |
| AATGCTGGTCCCAACACCAA+TGG | + | tig0042327:10712-10731 | Msa1462510:CDS | 50.0% | |
| ATGCTGGTCCCAACACCAAT+GGG | + | tig0042327:10713-10732 | Msa1462510:CDS | 50.0% | |
| !!! | TGGCCAAGTTTTGGAAGGCA+TGG | + | tig0042327:10879-10898 | Msa1462510:CDS | 50.0% |
| TGGTGATCGTCCCCTAAAGA+AGG | + | tig0042327:10939-10958 | Msa1462510:CDS | 50.0% | |
| ATGCAGCAACAGCCATCGGT+TGG | - | tig0042327:9232-9251 | Msa1462510:intergenic | 55.0% | |
| CTTCCAACCAGCTTCCCAAC+TGG | - | tig0042327:10186-10205 | Msa1462510:intergenic | 55.0% | |
| CAGTTGGGAAGCTGGTTGGA+AGG | + | tig0042327:10184-10203 | Msa1462510:CDS | 55.0% | |
| TCTCACTGGTGGAAAGGGCA+CGG | - | tig0042327:10260-10279 | Msa1462510:intergenic | 55.0% | |
| TGCCCTTTCCACCAGTGAGA+AGG | + | tig0042327:10260-10279 | Msa1462510:CDS | 55.0% | |
| GCCCTTTCCACCAGTGAGAA+GGG | + | tig0042327:10261-10280 | Msa1462510:CDS | 55.0% | |
| GCCCTTCTCACTGGTGGAAA+GGG | - | tig0042327:10265-10284 | Msa1462510:intergenic | 55.0% | |
| AGCCCTTCTCACTGGTGGAA+AGG | - | tig0042327:10266-10285 | Msa1462510:intergenic | 55.0% | |
| TCCACCAGTGAGAAGGGCTT+TGG | + | tig0042327:10267-10286 | Msa1462510:CDS | 55.0% | |
| GTAGCCAAAGCCCTTCTCAC+TGG | - | tig0042327:10274-10293 | Msa1462510:intergenic | 55.0% | |
| !! | CTTGATGACGCGATGGAAGG+TGG | - | tig0042327:10304-10323 | Msa1462510:intergenic | 55.0% |
| CACCTTCCATCGCGTCATCA+AGG | + | tig0042327:10302-10321 | Msa1462510:CDS | 55.0% | |
| !! | GTCCTTGATGACGCGATGGA+AGG | - | tig0042327:10307-10326 | Msa1462510:intergenic | 55.0% |
| CATGCTAACAGCTCCTGGTC+CGG | - | tig0042327:10689-10708 | Msa1462510:intergenic | 55.0% | |
| CATGACATTGGCAGACGCTG+TGG | + | tig0042327:10833-10852 | Msa1462510:intron | 55.0% | |
| GAATCACGGGAGACTGATCG+TGG | + | tig0042327:10919-10938 | Msa1462510:CDS | 55.0% | |
| ATGCAGCAACAGCCATCGGT+TGG | - | tig0042327:9232-9251 | Msa1462510:intergenic | 55.0% | |
| CTTCCAACCAGCTTCCCAAC+TGG | - | tig0042327:10186-10205 | Msa1462510:intergenic | 55.0% | |
| CAGTTGGGAAGCTGGTTGGA+AGG | + | tig0042327:10184-10203 | Msa1462510:CDS | 55.0% | |
| TCTCACTGGTGGAAAGGGCA+CGG | - | tig0042327:10260-10279 | Msa1462510:intergenic | 55.0% | |
| TGCCCTTTCCACCAGTGAGA+AGG | + | tig0042327:10260-10279 | Msa1462510:CDS | 55.0% | |
| GCCCTTTCCACCAGTGAGAA+GGG | + | tig0042327:10261-10280 | Msa1462510:CDS | 55.0% | |
| GCCCTTCTCACTGGTGGAAA+GGG | - | tig0042327:10265-10284 | Msa1462510:intergenic | 55.0% | |
| AGCCCTTCTCACTGGTGGAA+AGG | - | tig0042327:10266-10285 | Msa1462510:intergenic | 55.0% | |
| TCCACCAGTGAGAAGGGCTT+TGG | + | tig0042327:10267-10286 | Msa1462510:CDS | 55.0% | |
| GTAGCCAAAGCCCTTCTCAC+TGG | - | tig0042327:10274-10293 | Msa1462510:intergenic | 55.0% | |
| !! | CTTGATGACGCGATGGAAGG+TGG | - | tig0042327:10304-10323 | Msa1462510:intergenic | 55.0% |
| CACCTTCCATCGCGTCATCA+AGG | + | tig0042327:10302-10321 | Msa1462510:CDS | 55.0% | |
| !! | GTCCTTGATGACGCGATGGA+AGG | - | tig0042327:10307-10326 | Msa1462510:intergenic | 55.0% |
| CATGCTAACAGCTCCTGGTC+CGG | - | tig0042327:10689-10708 | Msa1462510:intergenic | 55.0% | |
| CATGACATTGGCAGACGCTG+TGG | + | tig0042327:10833-10852 | Msa1462510:intron | 55.0% | |
| GAATCACGGGAGACTGATCG+TGG | + | tig0042327:10919-10938 | Msa1462510:CDS | 55.0% | |
| !! | AAGAAGCATCTCCGTCGGGG+TGG | + | tig0042327:10008-10027 | Msa1462510:CDS | 60.0% |
| GTGGTTAGGTCCCGAGGTGT+GGG | + | tig0042327:10027-10046 | Msa1462510:CDS | 60.0% | |
| GCCAAAGCCCTTCTCACTGG+TGG | - | tig0042327:10271-10290 | Msa1462510:intergenic | 60.0% | |
| GATGACGCGATGGAAGGTGG+AGG | - | tig0042327:10301-10320 | Msa1462510:intergenic | 60.0% | |
| CCTGGTCCGGTATGAGACAC+TGG | - | tig0042327:10676-10695 | Msa1462510:intergenic | 60.0% | |
| CCAGTGTCTCATACCGGACC+AGG | + | tig0042327:10673-10692 | Msa1462510:intron | 60.0% | |
| CGGACCAGGAGCTGTTAGCA+TGG | + | tig0042327:10687-10706 | Msa1462510:CDS | 60.0% | |
| ACATTGGCAGACGCTGTGGC+TGG | + | tig0042327:10837-10856 | Msa1462510:intron | 60.0% | |
| AGACGCTGTGGCTGGATCAG+AGG | + | tig0042327:10845-10864 | Msa1462510:intron | 60.0% | |
| !! | AAGAAGCATCTCCGTCGGGG+TGG | + | tig0042327:10008-10027 | Msa1462510:CDS | 60.0% |
| GTGGTTAGGTCCCGAGGTGT+GGG | + | tig0042327:10027-10046 | Msa1462510:CDS | 60.0% | |
| GCCAAAGCCCTTCTCACTGG+TGG | - | tig0042327:10271-10290 | Msa1462510:intergenic | 60.0% | |
| GATGACGCGATGGAAGGTGG+AGG | - | tig0042327:10301-10320 | Msa1462510:intergenic | 60.0% | |
| CCTGGTCCGGTATGAGACAC+TGG | - | tig0042327:10676-10695 | Msa1462510:intergenic | 60.0% | |
| CCAGTGTCTCATACCGGACC+AGG | + | tig0042327:10673-10692 | Msa1462510:intron | 60.0% | |
| CGGACCAGGAGCTGTTAGCA+TGG | + | tig0042327:10687-10706 | Msa1462510:CDS | 60.0% | |
| ACATTGGCAGACGCTGTGGC+TGG | + | tig0042327:10837-10856 | Msa1462510:intron | 60.0% | |
| AGACGCTGTGGCTGGATCAG+AGG | + | tig0042327:10845-10864 | Msa1462510:intron | 60.0% | |
| GCATCTCCGTCGGGGTGGTT+AGG | + | tig0042327:10013-10032 | Msa1462510:CDS | 65.0% | |
| TCGGGACCTAACCACCCCGA+CGG | - | tig0042327:10022-10041 | Msa1462510:intergenic | 65.0% | |
| GGTGGTTAGGTCCCGAGGTG+TGG | + | tig0042327:10026-10045 | Msa1462510:CDS | 65.0% | |
| GCATCTCCGTCGGGGTGGTT+AGG | + | tig0042327:10013-10032 | Msa1462510:CDS | 65.0% | |
| TCGGGACCTAACCACCCCGA+CGG | - | tig0042327:10022-10041 | Msa1462510:intergenic | 65.0% | |
| GGTGGTTAGGTCCCGAGGTG+TGG | + | tig0042327:10026-10045 | Msa1462510:CDS | 65.0% | |
| GTCGGGGTGGTTAGGTCCCG+AGG | + | tig0042327:10021-10040 | Msa1462510:CDS | 70.0% | |
| GTCGGGGTGGTTAGGTCCCG+AGG | + | tig0042327:10021-10040 | Msa1462510:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0042327 | gene | 9116 | 11182 | 9116 | ID=Msa1462510;Name=Msa1462510 |
| tig0042327 | mRNA | 9116 | 11182 | 9116 | ID=Msa1462510-mRNA-1;Parent=Msa1462510;Name=Msa1462510-mRNA-1;_AED=0.14;_eAED=0.15;_QI=0|0.6|0.5|1|1|1|6|183|226 |
| tig0042327 | exon | 9116 | 9121 | 9116 | ID=Msa1462510-mRNA-1:exon:23684;Parent=Msa1462510-mRNA-1 |
| tig0042327 | exon | 9970 | 10125 | 9970 | ID=Msa1462510-mRNA-1:exon:23685;Parent=Msa1462510-mRNA-1 |
| tig0042327 | exon | 10138 | 10362 | 10138 | ID=Msa1462510-mRNA-1:exon:23686;Parent=Msa1462510-mRNA-1 |
| tig0042327 | exon | 10443 | 10497 | 10443 | ID=Msa1462510-mRNA-1:exon:23687;Parent=Msa1462510-mRNA-1 |
| tig0042327 | exon | 10677 | 10762 | 10677 | ID=Msa1462510-mRNA-1:exon:23688;Parent=Msa1462510-mRNA-1 |
| tig0042327 | exon | 10847 | 11182 | 10847 | ID=Msa1462510-mRNA-1:exon:23689;Parent=Msa1462510-mRNA-1 |
| tig0042327 | CDS | 9116 | 9121 | 9116 | ID=Msa1462510-mRNA-1:cds;Parent=Msa1462510-mRNA-1 |
| tig0042327 | CDS | 9970 | 10125 | 9970 | ID=Msa1462510-mRNA-1:cds;Parent=Msa1462510-mRNA-1 |
| tig0042327 | CDS | 10138 | 10362 | 10138 | ID=Msa1462510-mRNA-1:cds;Parent=Msa1462510-mRNA-1 |
| tig0042327 | CDS | 10443 | 10497 | 10443 | ID=Msa1462510-mRNA-1:cds;Parent=Msa1462510-mRNA-1 |
| tig0042327 | CDS | 10677 | 10762 | 10677 | ID=Msa1462510-mRNA-1:cds;Parent=Msa1462510-mRNA-1 |
| tig0042327 | CDS | 10847 | 10999 | 10847 | ID=Msa1462510-mRNA-1:cds;Parent=Msa1462510-mRNA-1 |
| tig0042327 | three_prime_UTR | 11000 | 11182 | 11000 | ID=Msa1462510-mRNA-1:three_prime_utr;Parent=Msa1462510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
