Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0461640 | PNY15635.1 | 75.277 | 271 | 16 | 1 | 1 | 220 | 1 | 271 | 1.20e-139 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0461640 | sp|Q9LHT0|TRNHF_ARATH | 57.752 | 258 | 58 | 2 | 12 | 218 | 6 | 263 | 2.99e-101 | 296 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0461640 | A0A2K3PK42 | 75.277 | 271 | 16 | 1 | 1 | 220 | 1 | 271 | 5.72e-140 | 401 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001950 | Msa0461640 | 0.834766 | 2.479629e-56 | -8.615850e-47 |
| Msa0003470 | Msa0461640 | 0.808146 | 3.575105e-50 | -8.615850e-47 |
| Msa0017120 | Msa0461640 | 0.805825 | 1.107292e-49 | -8.615850e-47 |
| Msa0017940 | Msa0461640 | 0.835087 | 2.058182e-56 | -8.615850e-47 |
| Msa0024680 | Msa0461640 | 0.818945 | 1.503677e-52 | -8.615850e-47 |
| Msa0027540 | Msa0461640 | 0.840584 | 7.961895e-58 | -8.615850e-47 |
| Msa0030730 | Msa0461640 | 0.815087 | 1.106493e-51 | -8.615850e-47 |
| Msa0032120 | Msa0461640 | 0.824993 | 5.971088e-54 | -8.615850e-47 |
| Msa0032400 | Msa0461640 | 0.824327 | 8.570826e-54 | -8.615850e-47 |
| Msa0033250 | Msa0461640 | 0.801969 | 7.005254e-49 | -8.615850e-47 |
| Msa0044220 | Msa0461640 | 0.841339 | 5.046685e-58 | -8.615850e-47 |
| Msa0044710 | Msa0461640 | 0.810895 | 9.181186e-51 | -8.615850e-47 |
| Msa0048020 | Msa0461640 | 0.825488 | 4.561372e-54 | -8.615850e-47 |
| Msa0050580 | Msa0461640 | 0.818306 | 2.100166e-52 | -8.615850e-47 |
| Msa0050720 | Msa0461640 | 0.814553 | 1.453287e-51 | -8.615850e-47 |
| Msa0050770 | Msa0461640 | 0.808102 | 3.652984e-50 | -8.615850e-47 |
| Msa0055410 | Msa0461640 | 0.801745 | 7.788604e-49 | -8.615850e-47 |
| Msa0060350 | Msa0461640 | 0.828162 | 1.047783e-54 | -8.615850e-47 |
| Msa0068700 | Msa0461640 | -0.820503 | 6.625860e-53 | -8.615850e-47 |
| Msa0073820 | Msa0461640 | 0.820711 | 5.936278e-53 | -8.615850e-47 |
| Msa0075310 | Msa0461640 | 0.838444 | 2.864752e-57 | -8.615850e-47 |
| Msa0082820 | Msa0461640 | 0.803984 | 2.685599e-49 | -8.615850e-47 |
| Msa0084680 | Msa0461640 | 0.841486 | 4.614653e-58 | -8.615850e-47 |
| Msa0089210 | Msa0461640 | 0.804814 | 1.803156e-49 | -8.615850e-47 |
| Msa0091480 | Msa0461640 | 0.837940 | 3.862573e-57 | -8.615850e-47 |
| Msa0095380 | Msa0461640 | 0.803190 | 3.923012e-49 | -8.615850e-47 |
| Msa0120330 | Msa0461640 | 0.818122 | 2.311619e-52 | -8.615850e-47 |
| Msa0123170 | Msa0461640 | 0.807470 | 4.975354e-50 | -8.615850e-47 |
| Msa0135980 | Msa0461640 | 0.812772 | 3.583997e-51 | -8.615850e-47 |
| Msa0141430 | Msa0461640 | 0.831274 | 1.831417e-55 | -8.615850e-47 |
| Msa0141830 | Msa0461640 | 0.831322 | 1.782451e-55 | -8.615850e-47 |
| Msa0143970 | Msa0461640 | 0.830225 | 3.310263e-55 | -8.615850e-47 |
| Msa0149500 | Msa0461640 | 0.830590 | 2.695194e-55 | -8.615850e-47 |
| Msa0157350 | Msa0461640 | 0.809404 | 1.924271e-50 | -8.615850e-47 |
| Msa0162030 | Msa0461640 | 0.809511 | 1.825031e-50 | -8.615850e-47 |
| Msa0162050 | Msa0461640 | 0.803662 | 3.132804e-49 | -8.615850e-47 |
| Msa0163550 | Msa0461640 | 0.819632 | 1.049120e-52 | -8.615850e-47 |
| Msa0168100 | Msa0461640 | 0.834723 | 2.541913e-56 | -8.615850e-47 |
| Msa0171780 | Msa0461640 | 0.822224 | 2.656074e-53 | -8.615850e-47 |
| Msa0171930 | Msa0461640 | 0.809070 | 2.268990e-50 | -8.615850e-47 |
| Msa0172350 | Msa0461640 | 0.802522 | 5.390369e-49 | -8.615850e-47 |
| Msa0172960 | Msa0461640 | -0.822462 | 2.338694e-53 | -8.615850e-47 |
| Msa0182640 | Msa0461640 | 0.802008 | 6.876614e-49 | -8.615850e-47 |
| Msa0182930 | Msa0461640 | 0.817789 | 2.747844e-52 | -8.615850e-47 |
| Msa0183610 | Msa0461640 | 0.859668 | 3.528402e-63 | -8.615850e-47 |
| Msa0183620 | Msa0461640 | 0.845582 | 3.712724e-59 | -8.615850e-47 |
| Msa0185700 | Msa0461640 | 0.825721 | 4.015893e-54 | -8.615850e-47 |
| Msa0194570 | Msa0461640 | 0.804840 | 1.781074e-49 | -8.615850e-47 |
| Msa0199730 | Msa0461640 | 0.826765 | 2.267347e-54 | -8.615850e-47 |
| Msa0200970 | Msa0461640 | 0.815518 | 8.870999e-52 | -8.615850e-47 |
| Msa0206940 | Msa0461640 | 0.801450 | 8.951471e-49 | -8.615850e-47 |
| Msa0207000 | Msa0461640 | 0.807660 | 4.535976e-50 | -8.615850e-47 |
| Msa0208630 | Msa0461640 | 0.813901 | 2.024113e-51 | -8.615850e-47 |
| Msa0213080 | Msa0461640 | 0.803208 | 3.890071e-49 | -8.615850e-47 |
| Msa0223390 | Msa0461640 | 0.824729 | 6.893476e-54 | -8.615850e-47 |
| Msa0228340 | Msa0461640 | -0.807809 | 4.215267e-50 | -8.615850e-47 |
| Msa0367370 | Msa0461640 | 0.803057 | 4.179277e-49 | -8.615850e-47 |
| Msa0374070 | Msa0461640 | 0.804374 | 2.227970e-49 | -8.615850e-47 |
| Msa0376510 | Msa0461640 | 0.844927 | 5.583307e-59 | -8.615850e-47 |
| Msa0378080 | Msa0461640 | 0.831454 | 1.653778e-55 | -8.615850e-47 |
| Msa0423250 | Msa0461640 | 0.807731 | 4.379459e-50 | -8.615850e-47 |
| Msa0425050 | Msa0461640 | 0.841752 | 3.926960e-58 | -8.615850e-47 |
| Msa0425940 | Msa0461640 | 0.837250 | 5.805559e-57 | -8.615850e-47 |
| Msa0426020 | Msa0461640 | 0.828342 | 9.480940e-55 | -8.615850e-47 |
| Msa0426160 | Msa0461640 | 0.837399 | 5.318592e-57 | -8.615850e-47 |
| Msa0431430 | Msa0461640 | 0.861446 | 1.020260e-63 | -8.615850e-47 |
| Msa0432680 | Msa0461640 | 0.801367 | 9.309401e-49 | -8.615850e-47 |
| Msa0436090 | Msa0461640 | 0.805370 | 1.379536e-49 | -8.615850e-47 |
| Msa0436460 | Msa0461640 | 0.820360 | 7.147643e-53 | -8.615850e-47 |
| Msa0450050 | Msa0461640 | 0.823390 | 1.421254e-53 | -8.615850e-47 |
| Msa0460330 | Msa0461640 | 0.812236 | 4.692936e-51 | -8.615850e-47 |
| Msa0461640 | Msa0469970 | 0.831482 | 1.628005e-55 | -8.615850e-47 |
| Msa0461640 | Msa0470180 | 0.836781 | 7.653512e-57 | -8.615850e-47 |
| Msa0461640 | Msa0476320 | 0.806824 | 6.816882e-50 | -8.615850e-47 |
| Msa0461640 | Msa0480320 | 0.812361 | 4.406608e-51 | -8.615850e-47 |
| Msa0461640 | Msa0482960 | 0.823677 | 1.217578e-53 | -8.615850e-47 |
| Msa0461640 | Msa0487910 | 0.811568 | 6.561371e-51 | -8.615850e-47 |
| Msa0461640 | Msa0490300 | 0.801902 | 7.231512e-49 | -8.615850e-47 |
| Msa0461640 | Msa0506760 | 0.803712 | 3.057866e-49 | -8.615850e-47 |
| Msa0461640 | Msa0508200 | 0.803672 | 3.117297e-49 | -8.615850e-47 |
| Msa0461640 | Msa0510450 | 0.823076 | 1.683081e-53 | -8.615850e-47 |
| Msa0461640 | Msa0518040 | 0.833757 | 4.440081e-56 | -8.615850e-47 |
| Msa0461640 | Msa0520320 | 0.817006 | 4.124521e-52 | -8.615850e-47 |
| Msa0461640 | Msa0524050 | 0.849641 | 2.838351e-60 | -8.615850e-47 |
| Msa0461640 | Msa0524120 | 0.814007 | 1.917975e-51 | -8.615850e-47 |
| Msa0461640 | Msa0526710 | 0.810923 | 9.054955e-51 | -8.615850e-47 |
| Msa0461640 | Msa0527590 | 0.835822 | 1.341310e-56 | -8.615850e-47 |
| Msa0461640 | Msa0527600 | 0.859649 | 3.573960e-63 | -8.615850e-47 |
| Msa0461640 | Msa0532300 | 0.849917 | 2.376485e-60 | -8.615850e-47 |
| Msa0461640 | Msa0532330 | 0.805206 | 1.492994e-49 | -8.615850e-47 |
| Msa0461640 | Msa0532840 | 0.836318 | 1.003648e-56 | -8.615850e-47 |
| Msa0461640 | Msa0533010 | 0.834609 | 2.715141e-56 | -8.615850e-47 |
| Msa0461640 | Msa0535060 | 0.800678 | 1.287943e-48 | -8.615850e-47 |
| Msa0461640 | Msa0542010 | 0.816780 | 4.636379e-52 | -8.615850e-47 |
| Msa0461640 | Msa0546380 | 0.833067 | 6.596252e-56 | -8.615850e-47 |
| Msa0461640 | Msa0546740 | 0.822619 | 2.150309e-53 | -8.615850e-47 |
| Msa0461640 | Msa0546840 | 0.819187 | 1.324625e-52 | -8.615850e-47 |
| Msa0461640 | Msa0563530 | 0.872493 | 3.049623e-67 | -8.615850e-47 |
| Msa0461640 | Msa0564930 | 0.805049 | 1.610191e-49 | -8.615850e-47 |
| Msa0461640 | Msa0567290 | 0.800019 | 1.754095e-48 | -8.615850e-47 |
| Msa0461640 | Msa0576420 | 0.824345 | 8.488696e-54 | -8.615850e-47 |
| Msa0461640 | Msa0578900 | 0.810568 | 1.080647e-50 | -8.615850e-47 |
| Msa0461640 | Msa0581460 | 0.834225 | 3.389242e-56 | -8.615850e-47 |
| Msa0461640 | Msa0589150 | 0.811783 | 5.890510e-51 | -8.615850e-47 |
| Msa0461640 | Msa0591060 | 0.800773 | 1.231625e-48 | -8.615850e-47 |
| Msa0461640 | Msa0591770 | 0.814949 | 1.186908e-51 | -8.615850e-47 |
| Msa0461640 | Msa0605620 | 0.828765 | 7.494093e-55 | -8.615850e-47 |
| Msa0461640 | Msa0607200 | 0.832268 | 1.041219e-55 | -8.615850e-47 |
| Msa0461640 | Msa0607480 | 0.801777 | 7.673560e-49 | -8.615850e-47 |
| Msa0461640 | Msa0610860 | 0.807910 | 4.013463e-50 | -8.615850e-47 |
| Msa0461640 | Msa0619330 | 0.819043 | 1.428520e-52 | -8.615850e-47 |
| Msa0461640 | Msa0621610 | 0.805053 | 1.606842e-49 | -8.615850e-47 |
| Msa0461640 | Msa0629290 | 0.854829 | 9.485589e-62 | -8.615850e-47 |
| Msa0461640 | Msa0629370 | 0.839479 | 1.545956e-57 | -8.615850e-47 |
| Msa0461640 | Msa0634130 | 0.800118 | 1.674469e-48 | -8.615850e-47 |
| Msa0461640 | Msa0639370 | 0.834012 | 3.832058e-56 | -8.615850e-47 |
| Msa0461640 | Msa0642650 | 0.840841 | 6.818357e-58 | -8.615850e-47 |
| Msa0461640 | Msa0651350 | 0.812477 | 4.156620e-51 | -8.615850e-47 |
| Msa0461640 | Msa0654540 | 0.843982 | 1.002039e-58 | -8.615850e-47 |
| Msa0461640 | Msa0659040 | 0.805995 | 1.019934e-49 | -8.615850e-47 |
| Msa0461640 | Msa0661470 | 0.807447 | 5.033255e-50 | -8.615850e-47 |
| Msa0461640 | Msa0667220 | 0.803286 | 3.748637e-49 | -8.615850e-47 |
| Msa0461640 | Msa0667970 | 0.834268 | 3.306750e-56 | -8.615850e-47 |
| Msa0461640 | Msa0668090 | 0.813290 | 2.758078e-51 | -8.615850e-47 |
| Msa0461640 | Msa0669850 | 0.806899 | 6.573184e-50 | -8.615850e-47 |
| Msa0461640 | Msa0681890 | 0.823154 | 1.613843e-53 | -8.615850e-47 |
| Msa0461640 | Msa0682400 | 0.801939 | 7.106292e-49 | -8.615850e-47 |
| Msa0461640 | Msa0690350 | 0.804602 | 1.996717e-49 | -8.615850e-47 |
| Msa0461640 | Msa0693570 | 0.804454 | 2.143705e-49 | -8.615850e-47 |
| Msa0461640 | Msa0703760 | 0.804882 | 1.745071e-49 | -8.615850e-47 |
| Msa0461640 | Msa0704220 | 0.801695 | 7.973519e-49 | -8.615850e-47 |
| Msa0461640 | Msa0707080 | 0.811280 | 7.574545e-51 | -8.615850e-47 |
| Msa0461640 | Msa0707780 | 0.808446 | 3.085668e-50 | -8.615850e-47 |
| Msa0461640 | Msa0709080 | 0.804761 | 1.849434e-49 | -8.615850e-47 |
| Msa0461640 | Msa0709480 | 0.814037 | 1.888754e-51 | -8.615850e-47 |
| Msa0461640 | Msa0709760 | 0.803166 | 3.969149e-49 | -8.615850e-47 |
| Msa0461640 | Msa0712980 | 0.821109 | 4.807153e-53 | -8.615850e-47 |
| Msa0461640 | Msa0730180 | 0.839659 | 1.388589e-57 | -8.615850e-47 |
| Msa0461640 | Msa0733000 | 0.802020 | 6.838936e-49 | -8.615850e-47 |
| Msa0461640 | Msa0734660 | 0.809163 | 2.166932e-50 | -8.615850e-47 |
| Msa0461640 | Msa0746600 | 0.810168 | 1.318220e-50 | -8.615850e-47 |
| Msa0461640 | Msa0748930 | 0.805149 | 1.534241e-49 | -8.615850e-47 |
| Msa0461640 | Msa0770430 | 0.824755 | 6.795055e-54 | -8.615850e-47 |
| Msa0461640 | Msa0775260 | 0.807057 | 6.085655e-50 | -8.615850e-47 |
| Msa0461640 | Msa0776220 | 0.813086 | 3.057608e-51 | -8.615850e-47 |
| Msa0461640 | Msa0780140 | 0.802496 | 5.456762e-49 | -8.615850e-47 |
| Msa0461640 | Msa0790830 | 0.805246 | 1.464166e-49 | -8.615850e-47 |
| Msa0461640 | Msa0797220 | 0.831228 | 1.880371e-55 | -8.615850e-47 |
| Msa0461640 | Msa0813320 | -0.815837 | 7.533032e-52 | -8.615850e-47 |
| Msa0461640 | Msa0813670 | 0.802470 | 5.525292e-49 | -8.615850e-47 |
| Msa0461640 | Msa0813720 | 0.806375 | 8.479570e-50 | -8.615850e-47 |
| Msa0461640 | Msa0843690 | 0.829012 | 6.529366e-55 | -8.615850e-47 |
| Msa0461640 | Msa0848360 | 0.836881 | 7.217230e-57 | -8.615850e-47 |
| Msa0461640 | Msa0848380 | 0.824057 | 9.918668e-54 | -8.615850e-47 |
| Msa0461640 | Msa0853170 | 0.808049 | 3.749047e-50 | -8.615850e-47 |
| Msa0461640 | Msa0872660 | 0.834705 | 2.567565e-56 | -8.615850e-47 |
| Msa0461640 | Msa0874760 | 0.838758 | 2.377452e-57 | -8.615850e-47 |
| Msa0461640 | Msa0878400 | 0.804858 | 1.765182e-49 | -8.615850e-47 |
| Msa0461640 | Msa0883030 | 0.802964 | 4.369282e-49 | -8.615850e-47 |
| Msa0461640 | Msa0890250 | 0.847555 | 1.074029e-59 | -8.615850e-47 |
| Msa0461640 | Msa0901100 | 0.813928 | 1.996823e-51 | -8.615850e-47 |
| Msa0461640 | Msa0909710 | 0.847627 | 1.026003e-59 | -8.615850e-47 |
| Msa0461640 | Msa0910400 | 0.848886 | 4.604464e-60 | -8.615850e-47 |
| Msa0461640 | Msa0925160 | 0.853420 | 2.417860e-61 | -8.615850e-47 |
| Msa0461640 | Msa0925730 | 0.804499 | 2.097742e-49 | -8.615850e-47 |
| Msa0461640 | Msa0931610 | 0.806800 | 6.897800e-50 | -8.615850e-47 |
| Msa0461640 | Msa0937550 | 0.800779 | 1.228267e-48 | -8.615850e-47 |
| Msa0461640 | Msa0937940 | 0.843848 | 1.088295e-58 | -8.615850e-47 |
| Msa0461640 | Msa0944710 | 0.804710 | 1.895473e-49 | -8.615850e-47 |
| Msa0461640 | Msa0955260 | 0.839568 | 1.465892e-57 | -8.615850e-47 |
| Msa0461640 | Msa0969400 | 0.802290 | 6.016727e-49 | -8.615850e-47 |
| Msa0461640 | Msa0972730 | 0.822174 | 2.727293e-53 | -8.615850e-47 |
| Msa0461640 | Msa0975080 | 0.855548 | 5.858046e-62 | -8.615850e-47 |
| Msa0461640 | Msa0981740 | 0.806449 | 8.181637e-50 | -8.615850e-47 |
| Msa0461640 | Msa0990520 | 0.832573 | 8.750229e-56 | -8.615850e-47 |
| Msa0461640 | Msa1018790 | 0.837548 | 4.871945e-57 | -8.615850e-47 |
| Msa0461640 | Msa1033960 | 0.805085 | 1.582889e-49 | -8.615850e-47 |
| Msa0461640 | Msa1038050 | 0.813980 | 1.945110e-51 | -8.615850e-47 |
| Msa0461640 | Msa1038320 | 0.820320 | 7.301435e-53 | -8.615850e-47 |
| Msa0461640 | Msa1044340 | 0.830632 | 2.633177e-55 | -8.615850e-47 |
| Msa0461640 | Msa1046870 | 0.804998 | 1.650623e-49 | -8.615850e-47 |
| Msa0461640 | Msa1048330 | 0.802756 | 4.822935e-49 | -8.615850e-47 |
| Msa0461640 | Msa1072080 | 0.826216 | 3.063315e-54 | -8.615850e-47 |
| Msa0461640 | Msa1073840 | 0.813497 | 2.483703e-51 | -8.615850e-47 |
| Msa0461640 | Msa1080460 | 0.809484 | 1.849205e-50 | -8.615850e-47 |
| Msa0461640 | Msa1080620 | 0.804951 | 1.687746e-49 | -8.615850e-47 |
| Msa0461640 | Msa1105290 | 0.804170 | 2.456196e-49 | -8.615850e-47 |
| Msa0461640 | Msa1122510 | 0.805781 | 1.130968e-49 | -8.615850e-47 |
| Msa0461640 | Msa1125780 | 0.829111 | 6.181058e-55 | -8.615850e-47 |
| Msa0461640 | Msa1125950 | 0.834288 | 3.268210e-56 | -8.615850e-47 |
| Msa0461640 | Msa1129560 | 0.876483 | 1.346773e-68 | -8.615850e-47 |
| Msa0461640 | Msa1129720 | 0.861796 | 7.977053e-64 | -8.615850e-47 |
| Msa0461640 | Msa1149760 | 0.812668 | 3.776351e-51 | -8.615850e-47 |
| Msa0461640 | Msa1157730 | 0.800283 | 1.549546e-48 | -8.615850e-47 |
| Msa0461640 | Msa1159100 | 0.850228 | 1.944539e-60 | -8.615850e-47 |
| Msa0461640 | Msa1160570 | 0.800705 | 1.271558e-48 | -8.615850e-47 |
| Msa0461640 | Msa1171340 | 0.827307 | 1.681720e-54 | -8.615850e-47 |
| Msa0461640 | Msa1171690 | 0.831638 | 1.490371e-55 | -8.615850e-47 |
| Msa0461640 | Msa1174010 | 0.809097 | 2.239587e-50 | -8.615850e-47 |
| Msa0461640 | Msa1183390 | 0.808737 | 2.673521e-50 | -8.615850e-47 |
| Msa0461640 | Msa1184730 | 0.811935 | 5.457066e-51 | -8.615850e-47 |
| Msa0461640 | Msa1188940 | 0.837064 | 6.480431e-57 | -8.615850e-47 |
| Msa0461640 | Msa1197110 | 0.823156 | 1.612316e-53 | -8.615850e-47 |
| Msa0461640 | Msa1210770 | 0.821046 | 4.970964e-53 | -8.615850e-47 |
| Msa0461640 | Msa1224670 | 0.827224 | 1.760835e-54 | -8.615850e-47 |
| Msa0461640 | Msa1238480 | 0.804147 | 2.483572e-49 | -8.615850e-47 |
| Msa0461640 | Msa1242330 | 0.849197 | 3.773590e-60 | -8.615850e-47 |
| Msa0461640 | Msa1246740 | 0.805229 | 1.476486e-49 | -8.615850e-47 |
| Msa0461640 | Msa1249870 | 0.834462 | 2.956235e-56 | -8.615850e-47 |
| Msa0461640 | Msa1250670 | 0.814068 | 1.859563e-51 | -8.615850e-47 |
| Msa0461640 | Msa1263030 | 0.807733 | 4.375361e-50 | -8.615850e-47 |
| Msa0461640 | Msa1265960 | 0.813887 | 2.038333e-51 | -8.615850e-47 |
| Msa0461640 | Msa1271510 | 0.803770 | 2.974559e-49 | -8.615850e-47 |
| Msa0461640 | Msa1280120 | 0.813779 | 2.153125e-51 | -8.615850e-47 |
| Msa0461640 | Msa1280130 | 0.832764 | 7.848996e-56 | -8.615850e-47 |
| Msa0461640 | Msa1284520 | 0.832528 | 8.977677e-56 | -8.615850e-47 |
| Msa0461640 | Msa1305520 | 0.815609 | 8.467895e-52 | -8.615850e-47 |
| Msa0461640 | Msa1324000 | 0.832346 | 9.960842e-56 | -8.615850e-47 |
| Msa0461640 | Msa1326000 | 0.807561 | 4.760856e-50 | -8.615850e-47 |
| Msa0461640 | Msa1337090 | 0.845289 | 4.456951e-59 | -8.615850e-47 |
| Msa0461640 | Msa1352290 | 0.812228 | 4.712562e-51 | -8.615850e-47 |
| Msa0461640 | Msa1354040 | 0.811477 | 6.867301e-51 | -8.615850e-47 |
| Msa0461640 | Msa1365120 | 0.800792 | 1.220535e-48 | -8.615850e-47 |
| Msa0461640 | Msa1379570 | 0.813084 | 3.061242e-51 | -8.615850e-47 |
| Msa0461640 | Msa1379990 | 0.828761 | 7.513201e-55 | -8.615850e-47 |
| Msa0461640 | Msa1382310 | 0.820079 | 8.289562e-53 | -8.615850e-47 |
| Msa0461640 | Msa1385900 | 0.836585 | 8.584807e-57 | -8.615850e-47 |
| Msa0461640 | Msa1389470 | 0.807486 | 4.937925e-50 | -8.615850e-47 |
| Msa0461640 | Msa1391370 | 0.803501 | 3.382240e-49 | -8.615850e-47 |
| Msa0461640 | Msa1398480 | 0.835050 | 2.102293e-56 | -8.615850e-47 |
| Msa0461640 | Msa1407710 | 0.803863 | 2.845021e-49 | -8.615850e-47 |
| Msa0461640 | Msa1412520 | 0.817627 | 2.990129e-52 | -8.615850e-47 |
| Msa0461640 | Msa1418200 | 0.828658 | 7.952725e-55 | -8.615850e-47 |
| Msa0461640 | Msa1428420 | 0.809620 | 1.729355e-50 | -8.615850e-47 |
| Msa0461640 | Msa1431000 | 0.801078 | 1.067077e-48 | -8.615850e-47 |
| Msa0461640 | Msa1438360 | 0.805827 | 1.105965e-49 | -8.615850e-47 |
| Msa0461640 | Msa1439120 | 0.800122 | 1.671361e-48 | -8.615850e-47 |
| Msa0461640 | Msa1440610 | 0.814393 | 1.576595e-51 | -8.615850e-47 |
| Msa0461640 | Msa1444450 | 0.807551 | 4.782642e-50 | -8.615850e-47 |
| Msa0461640 | Msa1447230 | 0.835968 | 1.231685e-56 | -8.615850e-47 |
| Msa0461640 | Msa1449880 | 0.821958 | 3.060741e-53 | -8.615850e-47 |
| Msa0461640 | Msa1462500 | 0.940043 | 4.570106e-100 | -8.615850e-47 |
| Msa0461640 | Msa1462510 | 0.811604 | 6.443152e-51 | -8.615850e-47 |
| Msa0461640 | Msa1464560 | 0.800373 | 1.485518e-48 | -8.615850e-47 |
| Msa0239660 | Msa0461640 | 0.829338 | 5.443101e-55 | -8.615850e-47 |
| Msa0255990 | Msa0461640 | 0.835706 | 1.435145e-56 | -8.615850e-47 |
| Msa0267760 | Msa0461640 | 0.812398 | 4.326572e-51 | -8.615850e-47 |
| Msa0269360 | Msa0461640 | 0.801527 | 8.634301e-49 | -8.615850e-47 |
| Msa0277640 | Msa0461640 | 0.821885 | 3.182424e-53 | -8.615850e-47 |
| Msa0280490 | Msa0461640 | 0.817277 | 3.583913e-52 | -8.615850e-47 |
| Msa0280900 | Msa0461640 | 0.819360 | 1.210016e-52 | -8.615850e-47 |
| Msa0284780 | Msa0461640 | 0.819937 | 8.933328e-53 | -8.615850e-47 |
| Msa0288240 | Msa0461640 | 0.816336 | 5.828658e-52 | -8.615850e-47 |
| Msa0288380 | Msa0461640 | 0.810040 | 1.404545e-50 | -8.615850e-47 |
| Msa0298940 | Msa0461640 | 0.814404 | 1.567894e-51 | -8.615850e-47 |
| Msa0298970 | Msa0461640 | 0.856306 | 3.517163e-62 | -8.615850e-47 |
| Msa0301180 | Msa0461640 | 0.804563 | 2.034667e-49 | -8.615850e-47 |
| Msa0302660 | Msa0461640 | 0.803642 | 3.161963e-49 | -8.615850e-47 |
| Msa0317260 | Msa0461640 | 0.842309 | 2.798436e-58 | -8.615850e-47 |
| Msa0318270 | Msa0461640 | 0.825172 | 5.417573e-54 | -8.615850e-47 |
| Msa0318310 | Msa0461640 | 0.815947 | 7.120727e-52 | -8.615850e-47 |
| Msa0323990 | Msa0461640 | 0.824451 | 8.016659e-54 | -8.615850e-47 |
| Msa0324010 | Msa0461640 | 0.809695 | 1.666490e-50 | -8.615850e-47 |
| Msa0326670 | Msa0461640 | 0.818682 | 1.725399e-52 | -8.615850e-47 |
| Msa0339860 | Msa0461640 | 0.804452 | 2.145207e-49 | -8.615850e-47 |
| Msa0344640 | Msa0461640 | 0.807554 | 4.776758e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0461640 | MtrunA17_Chr3g0112171 | 78.229 | 271 | 8 | 1 | 1 | 220 | 1 | 271 | 5.34e-143 | 400 |
| Msa0461640 | MtrunA17_Chr3g0112151 | 71.212 | 264 | 25 | 1 | 1 | 213 | 72 | 335 | 5.11e-130 | 370 |
| Msa0461640 | MtrunA17_Chr3g0112141 | 68.750 | 256 | 29 | 1 | 15 | 219 | 17 | 272 | 2.95e-122 | 347 |
| Msa0461640 | MtrunA17_Chr3g0112261 | 62.030 | 266 | 50 | 1 | 6 | 220 | 10 | 275 | 5.92e-115 | 329 |
| Msa0461640 | MtrunA17_Chr3g0112271 | 60.806 | 273 | 54 | 2 | 1 | 220 | 1 | 273 | 2.40e-112 | 322 |
| Msa0461640 | MtrunA17_Chr4g0032141 | 50.000 | 256 | 77 | 1 | 12 | 216 | 53 | 308 | 1.29e-89 | 266 |
| Msa0461640 | MtrunA17_Chr7g0239481 | 49.027 | 257 | 76 | 2 | 9 | 210 | 9 | 265 | 6.51e-82 | 245 |
| Msa0461640 | MtrunA17_Chr7g0239501 | 50.385 | 260 | 74 | 3 | 6 | 210 | 7 | 266 | 9.71e-80 | 239 |
| Msa0461640 | MtrunA17_Chr7g0239511 | 48.846 | 260 | 78 | 3 | 6 | 210 | 7 | 266 | 1.97e-79 | 238 |
| Msa0461640 | MtrunA17_Chr7g0239451 | 49.035 | 259 | 77 | 2 | 6 | 209 | 7 | 265 | 2.15e-79 | 238 |
| Msa0461640 | MtrunA17_Chr7g0239491 | 47.529 | 263 | 84 | 2 | 1 | 209 | 1 | 263 | 5.22e-79 | 237 |
| Msa0461640 | MtrunA17_Chr4g0032181 | 46.121 | 232 | 74 | 1 | 31 | 211 | 17 | 248 | 3.33e-69 | 212 |
| Msa0461640 | MtrunA17_Chr7g0239461 | 52.830 | 212 | 89 | 3 | 6 | 209 | 7 | 215 | 4.77e-69 | 210 |
| Msa0461640 | MtrunA17_Chr3g0112321 | 59.596 | 99 | 24 | 2 | 96 | 191 | 2 | 87 | 1.98e-33 | 115 |
| Msa0461640 | MtrunA17_Chr3g0112161 | 55.752 | 113 | 20 | 2 | 72 | 183 | 1 | 84 | 3.57e-29 | 104 |
| Msa0461640 | MtrunA17_Chr3g0122901 | 27.686 | 242 | 121 | 5 | 21 | 210 | 81 | 320 | 2.17e-21 | 90.1 |
| Msa0461640 | MtrunA17_Chr7g0259521 | 28.346 | 254 | 117 | 8 | 15 | 208 | 6 | 254 | 1.07e-18 | 82.0 |
| Msa0461640 | MtrunA17_Chr7g0259531 | 34.722 | 144 | 91 | 3 | 66 | 208 | 118 | 259 | 3.73e-18 | 80.5 |
| Msa0461640 | MtrunA17_Chr4g0028911 | 33.333 | 153 | 96 | 5 | 66 | 213 | 116 | 267 | 8.31e-18 | 79.7 |
| Msa0461640 | MtrunA17_Chr4g0075531 | 27.572 | 243 | 126 | 6 | 15 | 208 | 7 | 248 | 1.75e-16 | 75.9 |
| Msa0461640 | MtrunA17_Chr4g0028921 | 30.921 | 152 | 101 | 3 | 66 | 213 | 116 | 267 | 1.90e-16 | 75.9 |
| Msa0461640 | MtrunA17_Chr7g0244061 | 27.037 | 270 | 118 | 6 | 15 | 209 | 29 | 294 | 1.46e-15 | 73.9 |
| Msa0461640 | MtrunA17_Chr4g0026001 | 26.070 | 257 | 126 | 8 | 15 | 213 | 14 | 264 | 6.88e-14 | 68.9 |
| Msa0461640 | MtrunA17_Chr7g0267001 | 26.383 | 235 | 128 | 6 | 15 | 209 | 8 | 237 | 3.25e-13 | 66.6 |
| Msa0461640 | MtrunA17_Chr4g0074511 | 29.545 | 176 | 120 | 3 | 37 | 211 | 121 | 293 | 5.69e-13 | 66.6 |
| Msa0461640 | MtrunA17_Chr1g0182511 | 33.333 | 147 | 89 | 4 | 66 | 208 | 122 | 263 | 1.70e-12 | 65.1 |
| Msa0461640 | MtrunA17_Chr0c30g0494101 | 30.508 | 177 | 115 | 5 | 37 | 211 | 121 | 291 | 1.79e-12 | 65.1 |
| Msa0461640 | MtrunA17_Chr7g0268591 | 25.191 | 262 | 134 | 9 | 7 | 209 | 26 | 284 | 3.95e-12 | 64.3 |
| Msa0461640 | MtrunA17_Chr3g0084871 | 26.471 | 272 | 128 | 9 | 3 | 209 | 6 | 270 | 9.38e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0461640 | AT5G06060.1 | 57.752 | 258 | 58 | 2 | 12 | 218 | 6 | 263 | 3.04e-102 | 296 |
| Msa0461640 | AT2G29290.2 | 48.249 | 257 | 80 | 2 | 12 | 215 | 4 | 260 | 8.34e-85 | 252 |
| Msa0461640 | AT2G29360.1 | 48.659 | 261 | 83 | 1 | 4 | 213 | 5 | 265 | 5.61e-84 | 251 |
| Msa0461640 | AT1G07440.1 | 49.627 | 268 | 78 | 4 | 1 | 215 | 1 | 264 | 1.73e-83 | 249 |
| Msa0461640 | AT2G29350.1 | 48.106 | 264 | 85 | 2 | 1 | 213 | 1 | 263 | 3.04e-82 | 246 |
| Msa0461640 | AT2G29260.1 | 48.627 | 255 | 80 | 1 | 12 | 215 | 65 | 319 | 4.13e-82 | 248 |
| Msa0461640 | AT2G29150.1 | 48.302 | 265 | 84 | 3 | 1 | 213 | 1 | 264 | 9.79e-82 | 245 |
| Msa0461640 | AT1G07450.1 | 48.819 | 254 | 78 | 2 | 11 | 213 | 4 | 256 | 8.25e-81 | 242 |
| Msa0461640 | AT2G29370.1 | 44.444 | 261 | 94 | 1 | 4 | 213 | 5 | 265 | 4.54e-79 | 238 |
| Msa0461640 | AT2G29330.1 | 48.249 | 257 | 80 | 2 | 12 | 215 | 4 | 260 | 3.05e-78 | 236 |
| Msa0461640 | AT2G29340.2 | 45.946 | 259 | 87 | 2 | 12 | 217 | 4 | 262 | 2.94e-77 | 233 |
| Msa0461640 | AT2G29340.1 | 46.304 | 257 | 85 | 2 | 12 | 215 | 4 | 260 | 8.71e-77 | 233 |
| Msa0461640 | AT2G30670.1 | 47.036 | 253 | 83 | 1 | 12 | 213 | 4 | 256 | 4.78e-76 | 230 |
| Msa0461640 | AT2G29310.1 | 46.245 | 253 | 85 | 1 | 12 | 213 | 4 | 256 | 3.11e-74 | 226 |
| Msa0461640 | AT2G29320.1 | 47.471 | 257 | 81 | 3 | 13 | 215 | 11 | 267 | 3.55e-74 | 226 |
| Msa0461640 | AT2G29290.1 | 45.798 | 238 | 76 | 2 | 31 | 215 | 6 | 243 | 4.04e-72 | 219 |
| Msa0461640 | AT2G29300.1 | 45.736 | 258 | 86 | 3 | 12 | 215 | 4 | 261 | 1.31e-71 | 219 |
| Msa0461640 | AT2G29300.2 | 45.200 | 250 | 85 | 2 | 12 | 209 | 4 | 253 | 3.15e-68 | 211 |
| Msa0461640 | AT2G29350.3 | 45.778 | 225 | 70 | 2 | 40 | 213 | 2 | 225 | 1.21e-64 | 200 |
| Msa0461640 | AT2G29320.2 | 45.607 | 239 | 76 | 3 | 31 | 215 | 11 | 249 | 1.08e-63 | 198 |
| Msa0461640 | AT2G29310.2 | 44.017 | 234 | 80 | 1 | 31 | 213 | 21 | 254 | 3.85e-62 | 194 |
| Msa0461640 | AT2G29350.2 | 46.078 | 204 | 59 | 1 | 1 | 153 | 1 | 204 | 3.49e-57 | 181 |
| Msa0461640 | AT2G29340.3 | 41.414 | 198 | 65 | 1 | 12 | 158 | 4 | 201 | 1.87e-48 | 158 |
| Msa0461640 | AT2G29340.4 | 41.414 | 198 | 65 | 1 | 12 | 158 | 4 | 201 | 1.87e-48 | 158 |
| Msa0461640 | AT2G29310.3 | 42.424 | 198 | 63 | 1 | 12 | 158 | 4 | 201 | 2.61e-47 | 155 |
| Msa0461640 | AT2G29320.3 | 43.979 | 191 | 55 | 2 | 13 | 151 | 11 | 201 | 3.02e-46 | 152 |
| Msa0461640 | AT1G07440.2 | 42.442 | 172 | 45 | 2 | 1 | 121 | 1 | 169 | 7.16e-37 | 127 |
| Msa0461640 | AT2G29310.4 | 39.106 | 179 | 58 | 1 | 31 | 158 | 21 | 199 | 3.33e-35 | 124 |
| Msa0461640 | AT5G18210.1 | 28.185 | 259 | 124 | 6 | 10 | 208 | 3 | 259 | 1.32e-20 | 87.4 |
| Msa0461640 | AT1G24360.1 | 29.218 | 243 | 116 | 8 | 21 | 210 | 80 | 319 | 2.17e-20 | 87.8 |
| Msa0461640 | AT4G13180.1 | 30.460 | 174 | 117 | 4 | 39 | 210 | 92 | 263 | 3.72e-18 | 80.9 |
| Msa0461640 | AT2G29170.1 | 54.545 | 66 | 29 | 1 | 1 | 65 | 1 | 66 | 8.43e-18 | 76.3 |
| Msa0461640 | AT4G05530.1 | 26.939 | 245 | 125 | 5 | 15 | 208 | 9 | 250 | 1.93e-17 | 79.0 |
| Msa0461640 | AT3G05260.1 | 31.061 | 264 | 121 | 7 | 6 | 211 | 28 | 288 | 2.15e-17 | 79.3 |
| Msa0461640 | AT5G18210.2 | 27.675 | 271 | 120 | 8 | 10 | 220 | 3 | 257 | 6.69e-17 | 77.8 |
| Msa0461640 | AT1G54870.1 | 30.469 | 256 | 116 | 7 | 15 | 211 | 82 | 334 | 1.20e-16 | 77.8 |
| Msa0461640 | AT1G54870.2 | 30.469 | 256 | 116 | 7 | 15 | 211 | 84 | 336 | 1.26e-16 | 77.8 |
| Msa0461640 | AT3G03980.1 | 30.137 | 146 | 95 | 2 | 66 | 208 | 128 | 269 | 1.85e-16 | 76.3 |
| Msa0461640 | AT3G46170.1 | 31.126 | 151 | 99 | 4 | 66 | 212 | 132 | 281 | 2.48e-14 | 70.9 |
| Msa0461640 | AT2G17845.1 | 30.323 | 155 | 99 | 6 | 66 | 213 | 154 | 306 | 1.31e-13 | 68.9 |
| Msa0461640 | AT3G04000.1 | 27.306 | 271 | 126 | 8 | 4 | 207 | 3 | 269 | 4.32e-13 | 67.0 |
| Msa0461640 | AT3G55310.1 | 29.801 | 151 | 101 | 4 | 66 | 212 | 123 | 272 | 7.99e-13 | 66.2 |
| Msa0461640 | AT1G62610.4 | 28.947 | 152 | 102 | 4 | 66 | 212 | 125 | 275 | 8.36e-13 | 66.2 |
| Msa0461640 | AT1G62610.3 | 28.947 | 152 | 102 | 4 | 66 | 212 | 121 | 271 | 8.57e-13 | 66.2 |
| Msa0461640 | AT1G62610.1 | 28.947 | 152 | 102 | 4 | 66 | 212 | 120 | 270 | 8.93e-13 | 66.2 |
| Msa0461640 | AT1G62610.2 | 28.947 | 152 | 102 | 4 | 66 | 212 | 119 | 269 | 9.21e-13 | 66.2 |
| Msa0461640 | AT1G63380.4 | 28.947 | 152 | 102 | 4 | 66 | 212 | 125 | 275 | 2.45e-12 | 65.1 |
| Msa0461640 | AT1G63380.3 | 28.947 | 152 | 102 | 4 | 66 | 212 | 121 | 271 | 2.54e-12 | 65.1 |
| Msa0461640 | AT1G63380.1 | 28.947 | 152 | 102 | 4 | 66 | 212 | 123 | 273 | 2.66e-12 | 65.1 |
| Msa0461640 | AT1G63380.2 | 28.947 | 152 | 102 | 4 | 66 | 212 | 128 | 278 | 3.59e-12 | 64.7 |
| Msa0461640 | AT3G55290.2 | 28.477 | 151 | 103 | 4 | 66 | 212 | 123 | 272 | 3.84e-12 | 64.3 |
| Msa0461640 | AT3G55290.1 | 29.605 | 152 | 100 | 6 | 66 | 212 | 124 | 273 | 4.03e-12 | 64.3 |
| Msa0461640 | AT3G26760.1 | 26.336 | 262 | 132 | 6 | 8 | 209 | 30 | 290 | 1.40e-11 | 63.2 |
| Msa0461640 | AT3G12800.1 | 23.228 | 254 | 134 | 7 | 15 | 208 | 10 | 262 | 5.60e-11 | 61.2 |
Find 62 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAAAATGTTCCATTCTTAT+TGG | 0.204160 | 3_3:-60006725 | Msa0461640:three_prime_UTR |
| AAAATCACATCCGGTGTATT+AGG | 0.248415 | 3_3:+60006922 | None:intergenic |
| TTGTCAAGTTCTGATTAAAT+AGG | 0.323093 | 3_3:-60006829 | Msa0461640:three_prime_UTR |
| CATCCTCTGCTTAAAGAATC+TGG | 0.325649 | 3_3:-60008827 | Msa0461640:CDS |
| AATGGGCGAAAGACAATATA+AGG | 0.356013 | 3_3:-60008599 | Msa0461640:CDS |
| GGACAGATTGTTTCTGTTGA+TGG | 0.357615 | 3_3:-60006986 | Msa0461640:CDS |
| GGTTCTGCTATACGCTTTAT+CGG | 0.380929 | 3_3:+60007067 | None:intergenic |
| ATAGGATCTGGCTTTCAGTT+TGG | 0.381147 | 3_3:-60006811 | Msa0461640:three_prime_UTR |
| CTCCCTACTCAACACAATAA+TGG | 0.387753 | 3_3:-60006855 | Msa0461640:three_prime_UTR |
| TGATCTTGATCCAATAAGAA+TGG | 0.394831 | 3_3:+60006715 | None:intergenic |
| GTGGAAGAACTCGCTGAGTT+TGG | 0.400596 | 3_3:-60009330 | Msa0461640:CDS |
| CTGCTTAAAGAATCTGGAAA+TGG | 0.406314 | 3_3:-60008821 | Msa0461640:CDS |
| GAACAAAGGAATTCAATGTT+TGG | 0.411239 | 3_3:-60006667 | Msa0461640:three_prime_UTR |
| CATCACTTTCGAATAATCTT+CGG | 0.431430 | 3_3:+60008892 | None:intergenic |
| ACCGGCGGAACGCGTGGAAT+CGG | 0.443421 | 3_3:-60009363 | Msa0461640:CDS |
| GATGGAGGATTTACTGTGAA+TGG | 0.451398 | 3_3:-60006968 | Msa0461640:CDS |
| AGTTCTGATTAAATAGGATC+TGG | 0.454723 | 3_3:-60006823 | Msa0461640:three_prime_UTR |
| TCTCTCACAAGCATAGGTTC+TGG | 0.458121 | 3_3:-60008770 | Msa0461640:CDS |
| TGCATACCATCTATGTCAAT+TGG | 0.460251 | 3_3:-60008852 | Msa0461640:CDS |
| AGCGTTTATTCAGCTCCTCT+TGG | 0.468728 | 3_3:+60009280 | None:intergenic |
| GAAAGTGATGACTACTAACT+TGG | 0.480086 | 3_3:-60008879 | Msa0461640:CDS |
| ATACCATTATTGTGTTGAGT+AGG | 0.487298 | 3_3:+60006852 | None:intergenic |
| TCCGATTCCACGCGTTCCGC+CGG | 0.497124 | 3_3:+60009362 | None:intergenic |
| GTATTAGGTAATCCTCATGC+TGG | 0.506409 | 3_3:+60006937 | None:intergenic |
| TACCATTATTGTGTTGAGTA+GGG | 0.511090 | 3_3:+60006853 | None:intergenic |
| CCAGCTGCTTCCTACATCAC+TGG | 0.520639 | 3_3:-60007007 | Msa0461640:CDS |
| CTCGTCACCGGCGGAACGCG+TGG | 0.531156 | 3_3:-60009369 | Msa0461640:CDS |
| ACCACATGAAGTGTCTTCCT+TGG | 0.531653 | 3_3:-60007047 | Msa0461640:CDS |
| TGATGTAGGAAGCAGCTGGC+AGG | 0.543439 | 3_3:+60007011 | None:intergenic |
| TTAAACGAGTGGAAAGAGAA+AGG | 0.546612 | 3_3:-60009258 | Msa0461640:intron |
| GGATTCACAGCTCTCGTCAC+CGG | 0.550668 | 3_3:-60009381 | Msa0461640:CDS |
| AGCGTCTATGCAGCAAGTAA+AGG | 0.551642 | 3_3:-60008746 | Msa0461640:intron |
| AACAATCTGTCCAGTGATGT+AGG | 0.551671 | 3_3:+60006997 | None:intergenic |
| GATGTACCAATTGACATAGA+TGG | 0.556385 | 3_3:+60008846 | None:intergenic |
| AAGCTCAAGATGGTCTCTCA+AGG | 0.556802 | 3_3:-60009403 | Msa0461640:CDS |
| TTTCCAGATTCTTTAAGCAG+AGG | 0.567292 | 3_3:+60008824 | None:intergenic |
| TATTAGGTAATCCTCATGCT+GGG | 0.570838 | 3_3:+60006938 | None:intergenic |
| CAGATTGTTTCTGTTGATGG+AGG | 0.575569 | 3_3:-60006983 | Msa0461640:CDS |
| AGGAAGCAGCTGGCAGGCAA+AGG | 0.580855 | 3_3:+60007017 | None:intergenic |
| CACTTGTTCTAGAAACCAAG+AGG | 0.591688 | 3_3:-60009295 | Msa0461640:CDS |
| CCAGTGATGTAGGAAGCAGC+TGG | 0.595402 | 3_3:+60007007 | None:intergenic |
| ATGAGGATTACCTAATACAC+CGG | 0.598461 | 3_3:-60006932 | Msa0461640:exon |
| AGCATTACATGTTCCACAAG+TGG | 0.604747 | 3_3:+60008543 | None:intergenic |
| TGCAAACTGGTGATTCATGT+GGG | 0.606536 | 3_3:-60006636 | Msa0461640:three_prime_UTR |
| GCAGTAGCAGAAGCTCAAGA+TGG | 0.610273 | 3_3:-60009413 | Msa0461640:CDS |
| GTTGCATCTCTCACAAGCAT+AGG | 0.610660 | 3_3:-60008776 | Msa0461640:CDS |
| AGCTCAAGATGGTCTCTCAA+GGG | 0.613016 | 3_3:-60009402 | Msa0461640:CDS |
| ATGGATTTCAACCCAGCATG+AGG | 0.617391 | 3_3:-60006949 | Msa0461640:CDS |
| TGAATAAACGCTTAAACGAG+TGG | 0.622975 | 3_3:-60009269 | Msa0461640:CDS |
| GATTTCTTGGAACAGAACAA+AGG | 0.623559 | 3_3:-60006681 | Msa0461640:three_prime_UTR |
| TTCACAGCTCTCGTCACCGG+CGG | 0.631222 | 3_3:-60009378 | Msa0461640:CDS |
| GGAGCAACTGCGTTGCACCC+TGG | 0.632107 | 3_3:-60008578 | Msa0461640:CDS |
| CATTATTGTGTTGAGTAGGG+AGG | 0.636098 | 3_3:+60006856 | None:intergenic |
| TGGAATCGGACATGCTATCG+TGG | 0.642183 | 3_3:-60009349 | Msa0461640:CDS |
| TTGCAAACTGGTGATTCATG+TGG | 0.642775 | 3_3:-60006637 | Msa0461640:three_prime_UTR |
| GTATACGAAAACACCACTTG+TGG | 0.645433 | 3_3:-60008556 | Msa0461640:CDS |
| GTGTTGAGTAGGGAGGTGCA+TGG | 0.682214 | 3_3:+60006863 | None:intergenic |
| CAAACTGGTGATTCATGTGG+GGG | 0.683007 | 3_3:-60006634 | Msa0461640:three_prime_UTR |
| GCAAACTGGTGATTCATGTG+GGG | 0.692600 | 3_3:-60006635 | Msa0461640:three_prime_UTR |
| ACCAAGGAAGACACTTCATG+TGG | 0.707139 | 3_3:+60007046 | None:intergenic |
| CAGGCAAAGGAAAGTCACCA+AGG | 0.712267 | 3_3:+60007030 | None:intergenic |
| TCTAGAACAAGTGTAAACTG+TGG | 0.727754 | 3_3:+60009305 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAAGAAAATATATAGAAA+AGG | + | chr3_3:60006938-60006957 | None:intergenic | 15.0% |
| !!! | TTTGTAATCATGATTTTATT+TGG | - | chr3_3:60007599-60007618 | Msa0461640:intron | 15.0% |
| !!! | TATTCTTCTATTTTGTTATT+AGG | - | chr3_3:60007666-60007685 | Msa0461640:intron | 15.0% |
| !! | ATGTAGTATTAATCTATATA+TGG | - | chr3_3:60008874-60008893 | Msa0461640:CDS | 15.0% |
| !!! | AACCTTTTGCTTAAATATAA+TGG | - | chr3_3:60007362-60007381 | Msa0461640:intron | 20.0% |
| !! | ATCCATTATATTTAAGCAAA+AGG | + | chr3_3:60007367-60007386 | None:intergenic | 20.0% |
| !!! | TTTTGCTTAAATATAATGGA+TGG | - | chr3_3:60007366-60007385 | Msa0461640:intron | 20.0% |
| !! | AATTCTTTAGATAATTGAAC+AGG | - | chr3_3:60007809-60007828 | Msa0461640:intron | 20.0% |
| !! | TAGAACCAAAAAGAATAAAT+TGG | - | chr3_3:60008077-60008096 | Msa0461640:intron | 20.0% |
| !!! | AGTAACCAATTTATTCTTTT+TGG | + | chr3_3:60008085-60008104 | None:intergenic | 20.0% |
| !! | CAAAATAAAAAAATCACATC+CGG | + | chr3_3:60009147-60009166 | None:intergenic | 20.0% |
| !!! | ATTTTGTTTTCTGAATAGTA+TGG | - | chr3_3:60009277-60009296 | Msa0461640:CDS | 20.0% |
| !! | TTAAAATGTTCCATTCTTAT+TGG | - | chr3_3:60009332-60009351 | Msa0461640:CDS | 20.0% |
| !!! | CAAAATTTTGTTTGATTTCT+TGG | - | chr3_3:60009363-60009382 | Msa0461640:CDS | 20.0% |
| ! | ATTGAAGATATATCCAATGT+CGG | + | chr3_3:60007031-60007050 | None:intergenic | 25.0% |
| ! | TATGATGTTCTTGTGAAATT+AGG | - | chr3_3:60007094-60007113 | Msa0461640:CDS | 25.0% |
| ! | AAAAAATCTTGCTTGTGAAT+GGG | - | chr3_3:60007441-60007460 | Msa0461640:intron | 25.0% |
| ! | TAAAAAAAATGACAAAGCCA+TGG | + | chr3_3:60007564-60007583 | None:intergenic | 25.0% |
| !!! | ACATTCATACTCATTTTTGT+AGG | - | chr3_3:60007728-60007747 | Msa0461640:intron | 25.0% |
| ! | ATCAAAATTGCTTGCATATT+TGG | - | chr3_3:60007835-60007854 | Msa0461640:intron | 25.0% |
| ! | TCAAAATTGCTTGCATATTT+GGG | - | chr3_3:60007836-60007855 | Msa0461640:intron | 25.0% |
| ! | TACTCTTATCACAAGTTTAA+TGG | - | chr3_3:60007904-60007923 | Msa0461640:intron | 25.0% |
| ! | CAATGTAATTACTTCCATAA+AGG | - | chr3_3:60007975-60007994 | Msa0461640:intron | 25.0% |
| ! | TGATTATCAAATGACCTTTA+TGG | + | chr3_3:60007992-60008011 | None:intergenic | 25.0% |
| ! | ATTCATTTAGTATTGCATAC+AGG | - | chr3_3:60008310-60008329 | Msa0461640:intron | 25.0% |
| ! | TTCATTTAGTATTGCATACA+GGG | - | chr3_3:60008311-60008330 | Msa0461640:intron | 25.0% |
| ! | ATGTATATGATACACAATTG+TGG | - | chr3_3:60008412-60008431 | Msa0461640:intron | 25.0% |
| !! | GACATACTAAAACATGATTT+TGG | + | chr3_3:60008472-60008491 | None:intergenic | 25.0% |
| ! | CATACGAATAAGAAATGAAT+TGG | - | chr3_3:60008618-60008637 | Msa0461640:CDS | 25.0% |
| !! | TTGTCAAGTTCTGATTAAAT+AGG | - | chr3_3:60009228-60009247 | Msa0461640:intron | 25.0% |
| !! | TTTTCTGAATAGTATGGAAA+TGG | - | chr3_3:60009283-60009302 | Msa0461640:CDS | 25.0% |
| ! | AATGTTGCTTCTTCTTTCAA+CGG | - | chr3_3:60006886-60006905 | Msa0461640:three_prime_UTR | 30.0% |
| ! | ATATCTTCAATCAGAAGTGT+CGG | - | chr3_3:60007040-60007059 | Msa0461640:CDS | 30.0% |
| CATCACTTTCGAATAATCTT+CGG | + | chr3_3:60007168-60007187 | None:intergenic | 30.0% | |
| CAAAAAATCTTGCTTGTGAA+TGG | - | chr3_3:60007440-60007459 | Msa0461640:intron | 30.0% | |
| ACCTTCAATTATTCATTCCA+TGG | - | chr3_3:60007544-60007563 | Msa0461640:intron | 30.0% | |
| TTAAACAATGACCAATCAGT+CGG | + | chr3_3:60007632-60007651 | None:intergenic | 30.0% | |
| ! | TGATTGGTCATTGTTTAATC+AGG | - | chr3_3:60007634-60007653 | Msa0461640:intron | 30.0% |
| ! | GATTGGTCATTGTTTAATCA+GGG | - | chr3_3:60007635-60007654 | Msa0461640:intron | 30.0% |
| ATTGGTCATTGTTTAATCAG+GGG | - | chr3_3:60007636-60007655 | Msa0461640:intron | 30.0% | |
| ATTGTTTAATCAGGGGAATA+TGG | - | chr3_3:60007643-60007662 | Msa0461640:intron | 30.0% | |
| ! | TTAATGGTTTTCCATGTTGA+CGG | - | chr3_3:60007920-60007939 | Msa0461640:intron | 30.0% |
| AATTCACAATATTTGCACCT+AGG | - | chr3_3:60008036-60008055 | Msa0461640:intron | 30.0% | |
| ATTCACAATATTTGCACCTA+GGG | - | chr3_3:60008037-60008056 | Msa0461640:intron | 30.0% | |
| !!! | TTTTGGTTCTAACTGACAAA+TGG | + | chr3_3:60008068-60008087 | None:intergenic | 30.0% |
| ! | TGTCCAATCTTTTATAGTTG+AGG | - | chr3_3:60008488-60008507 | Msa0461640:intron | 30.0% |
| AGTCCTCAACTATAAAAGAT+TGG | + | chr3_3:60008494-60008513 | None:intergenic | 30.0% | |
| ATAGTTGAGGACTGTATATT+TGG | - | chr3_3:60008501-60008520 | Msa0461640:intron | 30.0% | |
| !! | TAAGAAATGAATTGGCTTTG+AGG | - | chr3_3:60008626-60008645 | Msa0461640:CDS | 30.0% |
| !! | AAGAAATGAATTGGCTTTGA+GGG | - | chr3_3:60008627-60008646 | Msa0461640:CDS | 30.0% |
| !!! | ACTTTTTTGTTAAGACGCAT+GGG | - | chr3_3:60008670-60008689 | Msa0461640:intron | 30.0% |
| ATTAATACTACATGAGCACA+CGG | + | chr3_3:60008867-60008886 | None:intergenic | 30.0% | |
| TACCATTATTGTGTTGAGTA+GGG | + | chr3_3:60009207-60009226 | None:intergenic | 30.0% | |
| ATACCATTATTGTGTTGAGT+AGG | + | chr3_3:60009208-60009227 | None:intergenic | 30.0% | |
| ! | AGTTCTGATTAAATAGGATC+TGG | - | chr3_3:60009234-60009253 | Msa0461640:intron | 30.0% |
| TGATCTTGATCCAATAAGAA+TGG | + | chr3_3:60009345-60009364 | None:intergenic | 30.0% | |
| GAACAAAGGAATTCAATGTT+TGG | - | chr3_3:60009390-60009409 | Msa0461640:CDS | 30.0% | |
| TTTGGCAAAAAATTGCAAAC+TGG | - | chr3_3:60009408-60009427 | Msa0461640:CDS | 30.0% | |
| ! | TCTAGAACAAGTGTAAACTG+TGG | + | chr3_3:60006755-60006774 | None:intergenic | 35.0% |
| TGAATAAACGCTTAAACGAG+TGG | - | chr3_3:60006788-60006807 | Msa0461640:three_prime_UTR | 35.0% | |
| TTAAACGAGTGGAAAGAGAA+AGG | - | chr3_3:60006799-60006818 | Msa0461640:three_prime_UTR | 35.0% | |
| ! | GAGAAAGGTTTTTCTGTTCA+TGG | - | chr3_3:60006814-60006833 | Msa0461640:three_prime_UTR | 35.0% |
| ATCTTCTTCTTCTCAAAGAG+AGG | - | chr3_3:60006852-60006871 | Msa0461640:three_prime_UTR | 35.0% | |
| TGAAATTAGGTGAACAATGC+TGG | - | chr3_3:60007107-60007126 | Msa0461640:CDS | 35.0% | |
| GAAAGTGATGACTACTAACT+TGG | - | chr3_3:60007178-60007197 | Msa0461640:intron | 35.0% | |
| TGCATACCATCTATGTCAAT+TGG | - | chr3_3:60007205-60007224 | Msa0461640:intron | 35.0% | |
| GATGTACCAATTGACATAGA+TGG | + | chr3_3:60007214-60007233 | None:intergenic | 35.0% | |
| TTTCCAGATTCTTTAAGCAG+AGG | + | chr3_3:60007236-60007255 | None:intergenic | 35.0% | |
| CTGCTTAAAGAATCTGGAAA+TGG | - | chr3_3:60007236-60007255 | Msa0461640:intron | 35.0% | |
| AATGGGCGAAAGACAATATA+AGG | - | chr3_3:60007458-60007477 | Msa0461640:intron | 35.0% | |
| GCCATGGAATGAATAATTGA+AGG | + | chr3_3:60007548-60007567 | None:intergenic | 35.0% | |
| AATTGCTTGCATATTTGGGA+TGG | - | chr3_3:60007840-60007859 | Msa0461640:intron | 35.0% | |
| ! | GATACATTTTTCCGTCAACA+TGG | + | chr3_3:60007934-60007953 | None:intergenic | 35.0% |
| ATCCCTTCACAAATTGTCTA+TGG | - | chr3_3:60008211-60008230 | Msa0461640:intron | 35.0% | |
| TAATCGTCAGTGTTGTCAAA+TGG | + | chr3_3:60008276-60008295 | None:intergenic | 35.0% | |
| ACATACGTGAATCAAACAGA+AGG | + | chr3_3:60008396-60008415 | None:intergenic | 35.0% | |
| !! | ATGATTTTGGCATCTTCACA+TGG | + | chr3_3:60008459-60008478 | None:intergenic | 35.0% |
| GAGGACTGTATATTTGGATA+TGG | - | chr3_3:60008507-60008526 | Msa0461640:intron | 35.0% | |
| !!! | GACTTTTTTGTTAAGACGCA+TGG | - | chr3_3:60008669-60008688 | Msa0461640:intron | 35.0% |
| ! | TGGCTCTTTAACATTTTTCC+TGG | - | chr3_3:60008695-60008714 | Msa0461640:intron | 35.0% |
| TTGGTTTATCTGTGTATGGA+GGG | - | chr3_3:60008776-60008795 | Msa0461640:CDS | 35.0% | |
| TATTAGGTAATCCTCATGCT+GGG | + | chr3_3:60009122-60009141 | None:intergenic | 35.0% | |
| ATGAGGATTACCTAATACAC+CGG | - | chr3_3:60009125-60009144 | Msa0461640:intron | 35.0% | |
| AAAATCACATCCGGTGTATT+AGG | + | chr3_3:60009138-60009157 | None:intergenic | 35.0% | |
| GATTTCTTGGAACAGAACAA+AGG | - | chr3_3:60009376-60009395 | Msa0461640:CDS | 35.0% | |
| !! | CACTTGTTCTAGAAACCAAG+AGG | - | chr3_3:60006762-60006781 | Msa0461640:three_prime_UTR | 40.0% |
| ACAATGCTGGAACAAATGTG+AGG | - | chr3_3:60007120-60007139 | Msa0461640:intron | 40.0% | |
| TCGGCTGTATACTCAATTGT+TGG | + | chr3_3:60007149-60007168 | None:intergenic | 40.0% | |
| CATCCTCTGCTTAAAGAATC+TGG | - | chr3_3:60007230-60007249 | Msa0461640:intron | 40.0% | |
| ! | AGTGGTGTTTTCGTATACCA+GGG | + | chr3_3:60007499-60007518 | None:intergenic | 40.0% |
| ! | AAGTGGTGTTTTCGTATACC+AGG | + | chr3_3:60007500-60007519 | None:intergenic | 40.0% |
| GTATACGAAAACACCACTTG+TGG | - | chr3_3:60007501-60007520 | Msa0461640:intron | 40.0% | |
| AGCATTACATGTTCCACAAG+TGG | + | chr3_3:60007517-60007536 | None:intergenic | 40.0% | |
| GTACTTGTCTGTAGTCTTTG+AGG | - | chr3_3:60007780-60007799 | Msa0461640:intron | 40.0% | |
| CGCCATAGACAATTTGTGAA+GGG | + | chr3_3:60008216-60008235 | None:intergenic | 40.0% | |
| CCTTCACAAATTGTCTATGG+CGG | - | chr3_3:60008214-60008233 | Msa0461640:intron | 40.0% | |
| AACAGAAGGCAGTGGAATTA+TGG | + | chr3_3:60008382-60008401 | None:intergenic | 40.0% | |
| CACATGGATCAAGGTAACAT+TGG | + | chr3_3:60008443-60008462 | None:intergenic | 40.0% | |
| ACAGTTGTAGCAAGTGATTC+TGG | - | chr3_3:60008562-60008581 | Msa0461640:CDS | 40.0% | |
| CAGTTGTAGCAAGTGATTCT+GGG | - | chr3_3:60008563-60008582 | Msa0461640:CDS | 40.0% | |
| GGGCATCAATATGGCAAATA+TGG | - | chr3_3:60008647-60008666 | Msa0461640:intron | 40.0% | |
| TTTGTTAAGACGCATGGGTT+TGG | - | chr3_3:60008675-60008694 | Msa0461640:intron | 40.0% | |
| !! | GTGGTTGGTTTATCTGTGTA+TGG | - | chr3_3:60008772-60008791 | Msa0461640:CDS | 40.0% |
| ! | GTTGGTTTATCTGTGTATGG+AGG | - | chr3_3:60008775-60008794 | Msa0461640:CDS | 40.0% |
| ! | TGGAGGGTTTTCTGCTATAT+AGG | - | chr3_3:60008792-60008811 | Msa0461640:CDS | 40.0% |
| GGTTCTGCTATACGCTTTAT+CGG | + | chr3_3:60008993-60009012 | None:intergenic | 40.0% | |
| AACAATCTGTCCAGTGATGT+AGG | + | chr3_3:60009063-60009082 | None:intergenic | 40.0% | |
| !! | GGACAGATTGTTTCTGTTGA+TGG | - | chr3_3:60009071-60009090 | Msa0461640:intron | 40.0% |
| !! | CAGATTGTTTCTGTTGATGG+AGG | - | chr3_3:60009074-60009093 | Msa0461640:intron | 40.0% |
| GATGGAGGATTTACTGTGAA+TGG | - | chr3_3:60009089-60009108 | Msa0461640:intron | 40.0% | |
| GTATTAGGTAATCCTCATGC+TGG | + | chr3_3:60009123-60009142 | None:intergenic | 40.0% | |
| CATTATTGTGTTGAGTAGGG+AGG | + | chr3_3:60009204-60009223 | None:intergenic | 40.0% | |
| CTCCCTACTCAACACAATAA+TGG | - | chr3_3:60009202-60009221 | Msa0461640:intron | 40.0% | |
| !! | ATAGGATCTGGCTTTCAGTT+TGG | - | chr3_3:60009246-60009265 | Msa0461640:intron | 40.0% |
| TTGCAAACTGGTGATTCATG+TGG | - | chr3_3:60009420-60009439 | Msa0461640:CDS | 40.0% | |
| TGCAAACTGGTGATTCATGT+GGG | - | chr3_3:60009421-60009440 | Msa0461640:CDS | 40.0% | |
| AAGCTCAAGATGGTCTCTCA+AGG | - | chr3_3:60006654-60006673 | Msa0461640:three_prime_UTR | 45.0% | |
| AGCTCAAGATGGTCTCTCAA+GGG | - | chr3_3:60006655-60006674 | Msa0461640:three_prime_UTR | 45.0% | |
| AGCGTTTATTCAGCTCCTCT+TGG | + | chr3_3:60006780-60006799 | None:intergenic | 45.0% | |
| GTTGCATCTCTCACAAGCAT+AGG | - | chr3_3:60007281-60007300 | Msa0461640:intron | 45.0% | |
| TCTCTCACAAGCATAGGTTC+TGG | - | chr3_3:60007287-60007306 | Msa0461640:intron | 45.0% | |
| AGCGTCTATGCAGCAAGTAA+AGG | - | chr3_3:60007311-60007330 | Msa0461640:intron | 45.0% | |
| ! | TTGGATGAACACCGACTGAT+TGG | - | chr3_3:60007618-60007637 | Msa0461640:intron | 45.0% |
| GTGATTACCAGTGTTGTCGA+TGG | - | chr3_3:60008117-60008136 | Msa0461640:intron | 45.0% | |
| TATTGCACCATCGACAACAC+TGG | + | chr3_3:60008127-60008146 | None:intergenic | 45.0% | |
| CGATGGTGCAATATGACAGA+AGG | - | chr3_3:60008134-60008153 | Msa0461640:intron | 45.0% | |
| ! | GCTGCAATGGCGTATTTCTA+TGG | + | chr3_3:60008170-60008189 | None:intergenic | 45.0% |
| CCGCCATAGACAATTTGTGA+AGG | + | chr3_3:60008217-60008236 | None:intergenic | 45.0% | |
| GTGAATCAAACAGAAGGCAG+TGG | + | chr3_3:60008390-60008409 | None:intergenic | 45.0% | |
| TGGCATCTTCACATGGATCA+AGG | + | chr3_3:60008452-60008471 | None:intergenic | 45.0% | |
| TTGTAGCAAGTGATTCTGGG+TGG | - | chr3_3:60008566-60008585 | Msa0461640:CDS | 45.0% | |
| !! | TGGCTTTGAGGGCATCAATA+TGG | - | chr3_3:60008638-60008657 | Msa0461640:CDS | 45.0% |
| ! | ACCACATGAAGTGTCTTCCT+TGG | - | chr3_3:60009010-60009029 | Msa0461640:intron | 45.0% |
| ACCAAGGAAGACACTTCATG+TGG | + | chr3_3:60009014-60009033 | None:intergenic | 45.0% | |
| ATGGATTTCAACCCAGCATG+AGG | - | chr3_3:60009108-60009127 | Msa0461640:intron | 45.0% | |
| GCAAACTGGTGATTCATGTG+GGG | - | chr3_3:60009422-60009441 | Msa0461640:CDS | 45.0% | |
| CAAACTGGTGATTCATGTGG+GGG | - | chr3_3:60009423-60009442 | Msa0461640:CDS | 45.0% | |
| GCAGTAGCAGAAGCTCAAGA+TGG | - | chr3_3:60006644-60006663 | Msa0461640:three_prime_UTR | 50.0% | |
| TGGAATCGGACATGCTATCG+TGG | - | chr3_3:60006708-60006727 | Msa0461640:three_prime_UTR | 50.0% | |
| GTGGAAGAACTCGCTGAGTT+TGG | - | chr3_3:60006727-60006746 | Msa0461640:three_prime_UTR | 50.0% | |
| CATGTGTCTGTGTCCGACAT+TGG | - | chr3_3:60007015-60007034 | Msa0461640:CDS | 50.0% | |
| AACCACACGTCATTCTGCCA+TGG | - | chr3_3:60008247-60008266 | Msa0461640:intron | 50.0% | |
| GTGTTGTCAAATGGCTGCCA+TGG | + | chr3_3:60008267-60008286 | None:intergenic | 50.0% | |
| ACTAGAGCATGTGCAGATCC+AGG | + | chr3_3:60008716-60008735 | None:intergenic | 50.0% | |
| TGTGCCTGCTGTGTTTGTGT+AGG | - | chr3_3:60008750-60008769 | Msa0461640:CDS | 50.0% | |
| ACCACCTACACAAACACAGC+AGG | + | chr3_3:60008757-60008776 | None:intergenic | 50.0% | |
| GCTGTGTTTGTGTAGGTGGT+TGG | - | chr3_3:60008757-60008776 | Msa0461640:CDS | 50.0% | |
| CAGGCAAAGGAAAGTCACCA+AGG | + | chr3_3:60009030-60009049 | None:intergenic | 50.0% | |
| GGATTCACAGCTCTCGTCAC+CGG | - | chr3_3:60006676-60006695 | Msa0461640:three_prime_UTR | 55.0% | |
| CTGACAAATGGCGCTTCCCT+AGG | + | chr3_3:60008056-60008075 | None:intergenic | 55.0% | |
| TGGCATGGCATAGGCTGCAA+TGG | + | chr3_3:60008183-60008202 | None:intergenic | 55.0% | |
| TTGCAGCCTATGCCATGCCA+TGG | - | chr3_3:60008183-60008202 | Msa0461640:intron | 55.0% | |
| TTGTGAAGGGATGCCTGCCA+TGG | + | chr3_3:60008203-60008222 | None:intergenic | 55.0% | |
| TGCCATGGCAGAATGACGTG+TGG | + | chr3_3:60008252-60008271 | None:intergenic | 55.0% | |
| GCCTGCTGTGTTTGTGTAGG+TGG | - | chr3_3:60008753-60008772 | Msa0461640:CDS | 55.0% | |
| TGATGTAGGAAGCAGCTGGC+AGG | + | chr3_3:60009049-60009068 | None:intergenic | 55.0% | |
| CCAGTGATGTAGGAAGCAGC+TGG | + | chr3_3:60009053-60009072 | None:intergenic | 55.0% | |
| CCAGCTGCTTCCTACATCAC+TGG | - | chr3_3:60009050-60009069 | Msa0461640:intron | 55.0% | |
| ! | GTGTTGAGTAGGGAGGTGCA+TGG | + | chr3_3:60009197-60009216 | None:intergenic | 55.0% |
| TTCACAGCTCTCGTCACCGG+CGG | - | chr3_3:60006679-60006698 | Msa0461640:three_prime_UTR | 60.0% | |
| AGCCTATGCCATGCCATGGC+AGG | - | chr3_3:60008187-60008206 | Msa0461640:intron | 60.0% | |
| TGCCTGCCATGGCATGGCAT+AGG | + | chr3_3:60008192-60008211 | None:intergenic | 60.0% | |
| AAGGGATGCCTGCCATGGCA+TGG | + | chr3_3:60008198-60008217 | None:intergenic | 60.0% | |
| AGGAAGCAGCTGGCAGGCAA+AGG | + | chr3_3:60009043-60009062 | None:intergenic | 60.0% | |
| ACCGGCGGAACGCGTGGAAT+CGG | - | chr3_3:60006694-60006713 | Msa0461640:three_prime_UTR | 65.0% | |
| TCCGATTCCACGCGTTCCGC+CGG | + | chr3_3:60006698-60006717 | None:intergenic | 65.0% | |
| GGAGCAACTGCGTTGCACCC+TGG | - | chr3_3:60007479-60007498 | Msa0461640:intron | 65.0% | |
| CTCGTCACCGGCGGAACGCG+TGG | - | chr3_3:60006688-60006707 | Msa0461640:three_prime_UTR | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 60006628 | 60009451 | 60006628 | ID=Msa0461640;Name=Msa0461640 |
| chr3_3 | mRNA | 60006628 | 60009451 | 60006628 | ID=Msa0461640-mRNA-1;Parent=Msa0461640;Name=Msa0461640-mRNA-1;_AED=0.39;_eAED=0.39;_QI=0|0.66|0.5|1|1|1|4|312|220 |
| chr3_3 | exon | 60006628 | 60007134 | 60006628 | ID=Msa0461640-mRNA-1:exon:12534;Parent=Msa0461640-mRNA-1 |
| chr3_3 | exon | 60008551 | 60008657 | 60008551 | ID=Msa0461640-mRNA-1:exon:12533;Parent=Msa0461640-mRNA-1 |
| chr3_3 | exon | 60008747 | 60008914 | 60008747 | ID=Msa0461640-mRNA-1:exon:12532;Parent=Msa0461640-mRNA-1 |
| chr3_3 | exon | 60009259 | 60009451 | 60009259 | ID=Msa0461640-mRNA-1:exon:12531;Parent=Msa0461640-mRNA-1 |
| chr3_3 | CDS | 60009259 | 60009451 | 60009259 | ID=Msa0461640-mRNA-1:cds;Parent=Msa0461640-mRNA-1 |
| chr3_3 | CDS | 60008747 | 60008914 | 60008747 | ID=Msa0461640-mRNA-1:cds;Parent=Msa0461640-mRNA-1 |
| chr3_3 | CDS | 60008551 | 60008657 | 60008551 | ID=Msa0461640-mRNA-1:cds;Parent=Msa0461640-mRNA-1 |
| chr3_3 | CDS | 60006940 | 60007134 | 60006940 | ID=Msa0461640-mRNA-1:cds;Parent=Msa0461640-mRNA-1 |
| chr3_3 | three_prime_UTR | 60006628 | 60006939 | 60006628 | ID=Msa0461640-mRNA-1:three_prime_utr;Parent=Msa0461640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
